Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,833,580 T→C R14R (CGT→CGC ynjA → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,833,5800TC100.0% 649.3 / NA 189R14R (CGT→CGCynjAhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (107/82);  total (107/82)

Only 100 of 194 total aligned reads displayed.

TTTTTATGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGT  >  NC_000913/1833490‑1833669
                                                                                          |                                                                                         
    tATGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAg                                                                                     <  1:4247976/93‑1 (MQ=255)
    tATGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAg                                                                                     <  1:6053416/93‑1 (MQ=255)
    tATGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAg                                                                                     <  2:2142924/93‑1 (MQ=255)
    tATGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAg                                                                                     <  1:6426257/93‑1 (MQ=255)
     aTGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAgg                                                                                    >  2:4764240/1‑93 (MQ=255)
       ggCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCg                                                                                  <  2:3149770/93‑1 (MQ=255)
        gCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGt                                                                                 <  1:1558508/93‑1 (MQ=255)
        gCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGt                                                                                 <  1:1072706/93‑1 (MQ=255)
         cGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTg                                                                                <  2:238502/93‑1 (MQ=255)
          gaagaaAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTgg                                                                               >  2:4620300/1‑93 (MQ=255)
          gaagaaAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTgg                                                                               >  2:6001454/1‑93 (MQ=255)
           aagaaAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGc                                                                              <  2:6018715/93‑1 (MQ=255)
            agaaAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCt                                                                             >  2:3600492/1‑93 (MQ=255)
            agaaAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCt                                                                             >  1:717868/1‑93 (MQ=255)
             gaaAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTg                                                                            <  1:1097390/93‑1 (MQ=255)
             gaaAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGGTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTg                                                                            >  1:2761324/1‑93 (MQ=255)
                aaTATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCAt                                                                         <  2:551125/93‑1 (MQ=255)
                 atatGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGGTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCAtc                                                                        >  2:3044244/1‑93 (MQ=255)
                  tatGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCAtcg                                                                       >  2:1399474/1‑93 (MQ=255)
                  tatGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCAtcg                                                                       >  1:1757168/1‑93 (MQ=255)
                   atGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGGTTACCGCCGCTTAGCAAAATTCCTTTAATTATACGCCCACAGGCGTGGCTGCAacgc                                                                      >  2:6478497/1‑92 (MQ=255)
                    tGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCAtcgtc                                                                     <  1:3607542/93‑1 (MQ=255)
                       cTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGcc                                                                  <  1:2229394/93‑1 (MQ=255)
                        ttGAACGCCGGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCa                                                                 >  1:1862959/1‑93 (MQ=255)
                        ttGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCa                                                                 >  1:6163945/1‑93 (MQ=255)
                         tGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCAt                                                                <  1:2857149/93‑1 (MQ=255)
                         tGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCAt                                                                >  2:4594864/1‑93 (MQ=255)
                          gAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCAtt                                                               >  2:746878/1‑93 (MQ=255)
                           aaCGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTa                                                              >  2:3564832/1‑93 (MQ=255)
                            aCGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTAc                                                             <  2:3286275/93‑1 (MQ=255)
                              gCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACgg                                                           >  2:2717710/1‑93 (MQ=255)
                              gCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACgg                                                           >  2:1346529/1‑93 (MQ=255)
                                cAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCg                                                         <  2:1703048/93‑1 (MQ=255)
                                 agaagaGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACTGCGa                                                        >  2:2426603/1‑93 (MQ=255)
                                 agaagaGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGa                                                        <  2:1793656/93‑1 (MQ=255)
                                 agaagaGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGa                                                        <  2:6261375/93‑1 (MQ=255)
                                  gaagaGGAATGCCTGATGGGTTTACCGCCGCTTCGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAg                                                       >  2:3802718/1‑93 (MQ=255)
                                   aagaGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAgg                                                      <  2:5082850/93‑1 (MQ=255)
                                   aagaGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAgg                                                      >  2:3460610/1‑93 (MQ=255)
                                     gagGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTg                                                    >  1:6096270/1‑93 (MQ=255)
                                      agGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGc                                                   <  2:2925108/93‑1 (MQ=255)
                                      agGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGc                                                   >  2:1854403/1‑93 (MQ=255)
                                       ggAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCt                                                  >  2:4323350/1‑93 (MQ=255)
                                       ggAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCt                                                  <  2:2049055/93‑1 (MQ=255)
                                       ggAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCt                                                  >  2:1317556/1‑93 (MQ=255)
                                        gAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTa                                                 <  2:4404838/93‑1 (MQ=255)
                                        gAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTa                                                 <  1:5755497/93‑1 (MQ=255)
                                        gAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTa                                                 >  1:1618679/1‑93 (MQ=255)
                                        gAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGAGAGGTGCTa                                                 >  2:1548245/1‑93 (MQ=255)
                                          aTGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAg                                               >  2:1707635/1‑93 (MQ=255)
                                          aTGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAg                                               >  2:4892531/1‑93 (MQ=255)
                                           tGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGc                                              >  2:5646034/1‑93 (MQ=255)
                                            gCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGcc                                             >  1:3999658/1‑93 (MQ=255)
                                              cTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGcccc                                           >  2:3424524/1‑93 (MQ=255)
                                               tGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCa                                          >  2:4233687/1‑93 (MQ=255)
                                                gATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCAt                                         >  2:889485/1‑93 (MQ=255)
                                                 aTGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCAtt                                        >  1:5627220/1‑93 (MQ=255)
                                                 aTGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCAtt                                        <  1:2060025/93‑1 (MQ=255)
                                                   gggTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCg                                      >  1:3927178/1‑93 (MQ=255)
                                                    ggTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGc                                     <  1:2440784/93‑1 (MQ=255)
                                                      tttACCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCtg                                   <  2:6412711/93‑1 (MQ=255)
                                                         aCCGTCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTTTTGGGAGGTGCTAAGGACCATTCGCtggtg                                >  1:2672616/1‑93 (MQ=255)
                                                         aCCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCtggtg                                >  2:5125948/1‑93 (MQ=255)
                                                         aCCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCtggtg                                <  1:3476183/93‑1 (MQ=255)
                                                         aCCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCtggtg                                >  2:5777380/1‑93 (MQ=255)
                                                         aCCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCtggtg                                <  2:2628856/93‑1 (MQ=255)
                                                         aCCGCCGCTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCtggtg                                <  1:4424730/93‑1 (MQ=255)
                                                           cgccgcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTggg                              <  1:2520016/93‑1 (MQ=255)
                                                           cgccgcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTggg                              <  2:4501973/93‑1 (MQ=255)
                                                           cgccgcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTggg                              <  1:646627/93‑1 (MQ=255)
                                                           cgccgcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTggg                              <  2:4130278/93‑1 (MQ=255)
                                                            gccgcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTgggg                             >  1:5710184/1‑93 (MQ=255)
                                                             ccgcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTggggg                            <  1:657223/93‑1 (MQ=255)
                                                             ccgcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTggggg                            >  2:1124658/1‑93 (MQ=255)
                                                               gcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCg                          <  2:321458/93‑1 (MQ=255)
                                                               gcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCg                          >  2:5321585/1‑93 (MQ=255)
                                                               gcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCg                          >  2:2221853/1‑93 (MQ=255)
                                                               gcTTAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCg                          <  2:2289329/93‑1 (MQ=255)
                                                                 ttAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGa                        >  1:1826379/1‑93 (MQ=255)
                                                                  tAGCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGAt                       >  1:4786256/1‑93 (MQ=255)
                                                                    gCAAAATTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATcc                     <  2:4095383/93‑1 (MQ=255)
                                                                    acAAAATTCCTTTAATTTTACGCCCACAGGCGTTGCTGCATCGTCGCCATTACGGCGATGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATcc                     <  1:3922246/92‑1 (MQ=255)
                                                                      aaaaTTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCg                   >  2:1198925/1‑93 (MQ=255)
                                                                       aaaTTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCACTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGt                  >  1:989871/1‑93 (MQ=255)
                                                                        aaTTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGtt                 >  1:4690581/1‑93 (MQ=255)
                                                                        aaTTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGtt                 <  1:622060/93‑1 (MQ=255)
                                                                         aTTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGttt                >  1:3188603/1‑93 (MQ=255)
                                                                         aTTCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGttt                >  2:3685055/1‑93 (MQ=255)
                                                                          ttCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGttta               >  1:684382/1‑93 (MQ=255)
                                                                           tCCTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGtttat              <  1:142230/93‑1 (MQ=255)
                                                                            ccTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGtttatc             >  1:2013518/1‑93 (MQ=255)
                                                                             cTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCTCCATTCGCTGGTGGGGGCGGATCCCGtttatct            >  1:1983694/1‑93 (MQ=255)
                                                                             cTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGtttatct            >  2:336861/1‑93 (MQ=255)
                                                                             cTTTAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCAATTCGCTGGTGGGGGCGGATCCCGtttatct            <  1:960475/93‑1 (MQ=255)
                                                                              tttAATTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCGCCAGTCGCTGGTGGGGGGGGATCCCGcttatctt           >  2:3473413/1‑93 (MQ=255)
                                                                                  aTTTTACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGtttatcttttat       >  1:3873496/1‑93 (MQ=255)
                                                                                    tttACGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGtttatcttttatct     <  2:1902247/93‑1 (MQ=255)
                                                                                       aCGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGgt  >  2:3952126/1‑93 (MQ=255)
                                                                                       aCGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGgt  >  2:1007920/1‑93 (MQ=255)
                                                                                       aCGCCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGgt  >  1:6191273/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTTTTATGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGT  >  NC_000913/1833490‑1833669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: