Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,152,344 T→C F152L (TTC→CTC)  b2074 → putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,152,3440TC100.0% 815.4 / NA 230F152L (TTC→CTC) b2074putative membrane protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (120/110);  total (120/110)

Only 100 of 236 total aligned reads displayed.

CCGCGTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATTTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAGGGC  >  NC_000913/2152254‑2152433
                                                                                          |                                                                                         
ccGCGTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACAtctc                                                                                         <  1:321499/93‑1 (MQ=255)
ccGCGTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACAtctc                                                                                         <  1:3903439/93‑1 (MQ=255)
 cgcgTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTcc                                                                                        <  1:4026577/93‑1 (MQ=255)
  gcgTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCa                                                                                       >  2:5209728/1‑93 (MQ=255)
  gcgTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCa                                                                                       <  1:6420218/93‑1 (MQ=255)
   cgTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAg                                                                                      >  1:2550982/1‑93 (MQ=255)
    gTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAgg                                                                                     <  1:3922370/93‑1 (MQ=255)
     ttACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGa                                                                                    >  2:3952087/1‑93 (MQ=255)
      tACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGaa                                                                                   <  2:47088/93‑1 (MQ=255)
      tACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGaa                                                                                   >  2:2519344/1‑93 (MQ=255)
       aCCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAg                                                                                  <  2:1191071/93‑1 (MQ=255)
         cTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGACGGc                                                                                >  1:723293/1‑93 (MQ=255)
          tCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGcc                                                                               >  1:2644883/1‑93 (MQ=255)
           cACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCca                                                                              >  1:4767817/1‑93 (MQ=255)
           cACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCca                                                                              <  2:5083976/93‑1 (MQ=255)
            aCCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCcag                                                                             >  2:2933878/1‑93 (MQ=255)
             ccGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCcagc                                                                            <  1:1884374/93‑1 (MQ=255)
              cGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGTCcagca                                                                           <  1:1562083/93‑1 (MQ=255)
              cGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCcagca                                                                           >  1:3022234/1‑93 (MQ=255)
              cGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCcagca                                                                           >  1:1707928/1‑93 (MQ=255)
              cGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCcagca                                                                           <  1:3453611/93‑1 (MQ=255)
              cGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCcagca                                                                           <  1:3513569/93‑1 (MQ=255)
               gggCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCcagcag                                                                          >  2:1609165/1‑93 (MQ=255)
                gccTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAgg                                                                         <  2:1983725/91‑1 (MQ=255)
                 gCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGt                                                                        >  1:4998274/1‑93 (MQ=255)
                  cTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTc                                                                       <  1:630358/93‑1 (MQ=255)
                   ttGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCa                                                                      >  2:2643130/1‑93 (MQ=255)
                    tGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCaa                                                                     <  1:605940/93‑1 (MQ=255)
                     ggCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCaaa                                                                    >  2:5694474/1‑93 (MQ=255)
                     ggCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCaaa                                                                    <  1:2630943/93‑1 (MQ=255)
                     ggCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCaaa                                                                    <  1:4395840/93‑1 (MQ=255)
                      gCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAg                                                                   <  2:3298535/93‑1 (MQ=255)
                       cACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGc                                                                  <  2:558715/93‑1 (MQ=255)
                        aCCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCa                                                                 <  1:1276766/93‑1 (MQ=255)
                         ccATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAg                                                                >  2:3774008/1‑93 (MQ=255)
                               ccgccgCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGAtt                                                          >  2:5172787/1‑93 (MQ=255)
                               ccgccgCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGAtt                                                          >  2:1143207/1‑93 (MQ=255)
                               ccgccgCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGAtt                                                          >  2:3630303/1‑93 (MQ=255)
                                cgccgcTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGAttt                                                         <  1:4499676/93‑1 (MQ=255)
                                cgccgcTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGAttt                                                         >  1:5267619/1‑93 (MQ=255)
                                   cgcTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACt                                                      <  2:6096676/93‑1 (MQ=255)
                                   cgcTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACt                                                      <  2:3477487/93‑1 (MQ=255)
                                   cgcTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACt                                                      <  1:980350/93‑1 (MQ=255)
                                    gcTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTg                                                     >  2:1750006/1‑93 (MQ=255)
                                     cTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTgg                                                    <  1:4149384/93‑1 (MQ=255)
                                      tAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGc                                                   >  1:3033247/1‑93 (MQ=255)
                                      tAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGACAGCAGGTCAAAGCAGGCGATTTACTGGc                                                   >  2:1664535/1‑93 (MQ=255)
                                       aaTACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCa                                                  >  1:3356346/1‑93 (MQ=255)
                                         tACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGa                                                <  1:5682684/93‑1 (MQ=255)
                                            cGTCACGGTGCGAAGCGGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGCCGATTTACTGGCAGAAAt                                             <  1:5711517/93‑1 (MQ=255)
                                              ttACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTg                                           >  2:6287311/1‑93 (MQ=255)
                                              ttACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTg                                           >  2:235639/1‑93 (MQ=255)
                                              ttACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTg                                           <  2:5850397/93‑1 (MQ=255)
                                                 cGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGAcc                                        >  2:2995905/1‑93 (MQ=255)
                                                  ggTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGAccc                                       >  1:1442553/1‑93 (MQ=255)
                                                   gTGCGCAGCCGCGTGGACGTCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGAcccc                                      <  2:2264094/93‑1 (MQ=255)
                                                   gTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGAcccc                                      >  2:3713009/1‑93 (MQ=255)
                                                   gTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGAcccc                                      >  1:2666764/1‑93 (MQ=255)
                                                   gTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGAcccc                                      <  2:5982233/93‑1 (MQ=255)
                                                   gTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGAcccc                                      <  1:4863561/93‑1 (MQ=255)
                                                    tGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCcca                                     <  1:5864160/93‑1 (MQ=255)
                                                        cAGCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCccagcca                                 >  2:4888344/1‑93 (MQ=255)
                                                          gCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGt                               <  1:1467913/93‑1 (MQ=255)
                                                          gCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGt                               >  1:4824899/1‑93 (MQ=255)
                                                          gCCGCGTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGt                               >  1:2444902/1‑93 (MQ=255)
                                                               gTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCaaa                          >  1:5151409/1‑93 (MQ=255)
                                                               gTGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCaaa                          >  1:5352169/1‑93 (MQ=255)
                                                                tGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAg                         >  1:2048205/1‑93 (MQ=255)
                                                                tGGACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAg                         >  1:936097/1‑93 (MQ=255)
                                                                 ggACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGt                        <  1:1025344/93‑1 (MQ=255)
                                                                 ggACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGt                        <  2:3054883/93‑1 (MQ=255)
                                                                  gACGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGtt                       >  1:5821273/1‑93 (MQ=255)
                                                                   aCGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTg                      >  1:3990843/1‑93 (MQ=255)
                                                                    cGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGc                     >  2:3918922/1‑93 (MQ=255)
                                                                    cGGCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTAACCCCAGCCAGATCAAAGTTGc                     >  1:50653/1‑93 (MQ=255)
                                                                      gCCAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCAt                   >  1:3612990/1‑93 (MQ=255)
                                                                        cAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTa                 <  2:564953/93‑1 (MQ=255)
                                                                        cAACTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTa                 <  2:1971155/93‑1 (MQ=255)
                                                                         aaCTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAg                >  2:4106307/1‑93 (MQ=255)
                                                                         aaCTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAg                <  2:4849073/93‑1 (MQ=255)
                                                                           cTGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGca              >  2:4445782/1‑93 (MQ=255)
                                                                            tGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGcac             <  1:2305563/93‑1 (MQ=255)
                                                                            tGATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGcac             >  2:4561686/1‑93 (MQ=255)
                                                                             gATAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGcaca            >  1:6255627/1‑93 (MQ=255)
                                                                               tAGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAg          >  2:4180636/1‑93 (MQ=255)
                                                                                aGCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGc         >  2:845433/1‑93 (MQ=255)
                                                                                 gCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGcc        >  1:6381969/1‑93 (MQ=255)
                                                                                 gCGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGcc        <  1:2855865/93‑1 (MQ=255)
                                                                                  cGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGccc       <  2:1294917/93‑1 (MQ=255)
                                                                                  cGTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGccc       <  1:2916184/93‑1 (MQ=255)
                                                                                   gTTACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCa      >  2:2203826/1‑93 (MQ=255)
                                                                                   gTTACAGCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCa      <  1:5731026/93‑1 (MQ=255)
                                                                                    ttccATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAg     <  1:1094123/90‑1 (MQ=255)
                                                                                    ttACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAg     <  1:6261606/93‑1 (MQ=255)
                                                                                     tACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAgg    <  2:4627222/93‑1 (MQ=255)
                                                                                     tACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAgg    >  1:3745871/1‑93 (MQ=255)
                                                                                     tACATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAgg    >  1:3679586/1‑93 (MQ=255)
                                                                                       cATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAGGGc  >  2:4280269/1‑93 (MQ=255)
                                                                                       cATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAGGGc  >  2:2125641/1‑93 (MQ=255)
                                                                                       cATCTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAGGGc  <  1:298794/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCGCGTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATTTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAGGGC  >  NC_000913/2152254‑2152433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: