Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,275,005 T→C V229A (GTA→GCA)  yejF → putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,275,0050TC99.6% 817.1 / ‑5.2 237V229A (GTA→GCA) yejFputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (130/106);  total (130/107)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 244 total aligned reads displayed.

TGCGCGAACTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGTAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTCAACA  >  NC_000913/2274915‑2275094
                                                                                          |                                                                                         
tGCGCGAACTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCaa                                                                                         <  1:1629843/93‑1 (MQ=255)
 gcgcGAACTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAAt                                                                                        <  2:4387849/93‑1 (MQ=255)
  cgcgAACTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATg                                                                                       >  1:311123/1‑93 (MQ=255)
   gcgAACTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGc                                                                                      <  2:845131/93‑1 (MQ=255)
      aaCTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCaaa                                                                                   >  2:2306198/1‑93 (MQ=255)
       aCTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCaaaa                                                                                  >  2:2196245/1‑93 (MQ=255)
       aCTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCaaaa                                                                                  <  1:6231964/93‑1 (MQ=255)
          gCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACgg                                                                               >  2:846265/1‑93 (MQ=255)
           cAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGt                                                                              <  1:1139918/93‑1 (MQ=255)
           cAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGt                                                                              <  2:3948775/93‑1 (MQ=255)
           cAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGt                                                                              <  2:1355558/93‑1 (MQ=255)
           cAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGt                                                                              <  1:3557473/93‑1 (MQ=255)
            aaGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTc                                                                             <  1:6029580/93‑1 (MQ=255)
             aGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCg                                                                            >  2:2919799/1‑93 (MQ=255)
             aGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCg                                                                            >  1:6079650/1‑93 (MQ=255)
             aGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCg                                                                            >  1:3419400/1‑93 (MQ=255)
              ggCGAGCTGAATATGGGCATGCTGTTTATTGCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGc                                                                           <  2:5270664/93‑1 (MQ=255)
              ggCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGc                                                                           >  2:3991668/1‑93 (MQ=255)
              ggCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGc                                                                           <  1:2915288/93‑1 (MQ=255)
              ggCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGc                                                                           >  2:2595351/1‑93 (MQ=255)
               gCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCt                                                                          <  2:481923/93‑1 (MQ=255)
                 gAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGGCCACCGCGTGGCGGCAATGCAAAACGGTCGCtgt                                                                        >  1:214931/1‑93 (MQ=255)
                 gAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCtgt                                                                        <  2:5466474/93‑1 (MQ=255)
                   gCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTgtgt                                                                      <  2:4130673/93‑1 (MQ=255)
                    cTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTc                                                                     <  1:892646/93‑1 (MQ=255)
                        atatGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGc                                                                 <  2:5719854/93‑1 (MQ=255)
                            gggCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCaaaa                                                             >  1:1471167/1‑93 (MQ=255)
                               cATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTa                                                          <  2:5553142/93‑1 (MQ=255)
                                 tGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTAcg                                                        >  1:3810605/1‑93 (MQ=255)
                                  gCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTAcgc                                                       >  1:2465893/1‑93 (MQ=255)
                                    tGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTAcgccg                                                     >  2:4508661/1‑93 (MQ=255)
                                     gTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTAcgccgc                                                    <  1:42593/93‑1 (MQ=255)
                                     gTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTAcgccgc                                                    <  2:4549161/93‑1 (MQ=255)
                                     gTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTAcgccgc                                                    <  1:1748768/93‑1 (MQ=255)
                                     gTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTAcgccgc                                                    <  1:6211242/93‑1 (MQ=255)
                                     gTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTAcgccgc                                                    <  2:3553665/93‑1 (MQ=255)
                                      tttATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgct                                                   <  1:2093659/93‑1 (MQ=255)
                                      tttATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgct                                                   >  1:2815644/1‑93 (MQ=255)
                                        tattaCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgctac                                                 >  2:546852/1‑93 (MQ=255)
                                         attaCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgctacg                                                >  1:5205304/1‑93 (MQ=255)
                                         attaCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgctacg                                                >  2:53483/1‑93 (MQ=255)
                                          ttaCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgctacgc                                               >  1:170433/1‑93 (MQ=255)
                                          ttaCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgctacgc                                               >  2:2734022/1‑93 (MQ=255)
                                           taCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgctacgct                                              <  2:2757277/93‑1 (MQ=255)
                                           taCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgctacgct                                              >  2:4911705/1‑93 (MQ=255)
                                           taCTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCcgctacgct                                              <  2:3394593/93‑1 (MQ=255)
                                             cTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTAt                                            <  2:3016392/93‑1 (MQ=255)
                                             cTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTAt                                            <  1:767583/93‑1 (MQ=255)
                                             cTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTAt                                            >  1:964213/1‑93 (MQ=255)
                                              tCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTAtt                                           <  1:6117637/93‑1 (MQ=255)
                                              tCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTAtt                                           <  2:6191765/93‑1 (MQ=255)
                                              tCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTAtt                                           >  2:2525458/1‑93 (MQ=255)
                                               cATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTAttt                                          <  1:5893417/93‑1 (MQ=255)
                                               cATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTAttt                                          >  2:1412891/1‑93 (MQ=255)
                                                aTAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTg                                         <  2:1761235/93‑1 (MQ=255)
                                                aTAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTg                                         >  1:4445333/1‑93 (MQ=255)
                                                aTAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTg                                         >  2:2076278/1‑93 (MQ=255)
                                                aTAACCTCAGCATTGTCAGAAAACTGGACCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTg                                         >  2:6439853/1‑93 (MQ=255)
                                                  aaCCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCa                                       >  2:1520911/1‑93 (MQ=255)
                                                  aaCCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCa                                       <  1:5601648/93‑1 (MQ=255)
                                                   aCCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCAt                                      >  1:138261/1‑93 (MQ=255)
                                                    ccTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATc                                     <  1:2579756/93‑1 (MQ=255)
                                                      tCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAc                                   <  1:6427378/93‑1 (MQ=255)
                                                        aGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAccc                                 <  2:4812992/93‑1 (MQ=255)
                                                        aGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAccc                                 >  1:1325586/1‑93 (MQ=255)
                                                        aGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAccc                                 >  1:3715714/1‑93 (MQ=255)
                                                        aGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAccc                                 <  2:3461232/93‑1 (MQ=255)
                                                        aGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAccc                                 <  2:4994576/93‑1 (MQ=255)
                                                        aGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAccc                                 <  2:3185380/93‑1 (MQ=255)
                                                        aGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAccc                                 >  1:3178725/1‑93 (MQ=255)
                                                        aGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCAccc                                 <  1:667185/93‑1 (MQ=255)
                                                         gCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCa                                >  1:1920239/1‑93 (MQ=255)
                                                         gCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCa                                >  1:4233318/1‑93 (MQ=255)
                                                         gCATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCa                                >  1:1535454/1‑93 (MQ=255)
                                                          cATTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCAc                               <  2:2690397/93‑1 (MQ=255)
                                                           aTTGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACt                              >  1:1027720/1‑93 (MQ=255)
                                                            ttGTCAGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTc                             >  1:3388080/1‑93 (MQ=255)
                                                                 aGAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCt                        <  1:2931326/93‑1 (MQ=255)
                                                                  gAAAACTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCtt                       <  1:5134654/93‑1 (MQ=255)
                                                                   aaaaCTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTa                      >  1:5007831/1‑93 (MQ=255)
                                                                    aaaCTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTac                     >  1:2314696/1‑93 (MQ=255)
                                                                    aaaCTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTac                     >  1:2727500/1‑93 (MQ=255)
                                                                       cTGGCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTacaca                  >  1:4869546/1‑93 (MQ=255)
                                                                         ggCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTAcacaca                >  1:5779017/1‑93 (MQ=255)
                                                                         ggCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTAcacaca                >  2:2512375/1‑93 (MQ=255)
                                                                          gCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACaa               >  2:5598659/1‑93 (MQ=255)
                                                                          gCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACaa               <  2:2927233/93‑1 (MQ=255)
                                                                          gCCCACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACaa               >  2:3725964/1‑93 (MQ=255)
                                                                            ccACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACaaaa             <  2:183285/93‑1 (MQ=255)
                                                                            ccACCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACaaaa             >  2:4430603/1‑93 (MQ=255)
                                                                              aCCGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGc           >  2:1915790/1‑93 (MQ=255)
                                                                               ccGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCt          <  1:5395147/93‑1 (MQ=255)
                                                                               ccGCGTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCt          <  2:5941626/93‑1 (MQ=255)
                                                                                 gcgTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTAc        >  1:4152030/1‑93 (MQ=255)
                                                                                  cgTGGCGGCAATGCAAAACGGTCGCTGTGTCGTGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTCCt       <  2:47060/93‑1 (MQ=255)
                                                                                   gTGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTc      <  1:3486820/93‑1 (MQ=255)
                                                                                    tGGCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTCa     >  2:6357170/1‑93 (MQ=255)
                                                                                     ggcggcAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTCaa    <  2:3764353/93‑1 (MQ=255)
                                                                                      gCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTCAAc   >  1:3237506/1‑93 (MQ=255)
                                                                                      gCGGCAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTCAAc   <  1:3018888/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGCGCGAACTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGTAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTCAACA  >  NC_000913/2274915‑2275094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: