Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,609,667 C→T A64V (GCA→GTA)  b2490 → putative protein processing element

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,609,6670CT100.0% 828.9 / NA 224A64V (GCA→GTA) b2490putative protein processing element
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (98/126);  total (98/126)

Only 100 of 242 total aligned reads displayed.

ACTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGCACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGCCCTGT  >  NC_000913/2609577‑2609756
                                                                                          |                                                                                         
tcTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTAc                                                                                         <  2:5583570/92‑1 (MQ=255)
aCTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTAc                                                                                         >  1:5528764/1‑93 (MQ=255)
aCTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTAc                                                                                         >  2:3571694/1‑93 (MQ=255)
aCTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTAc                                                                                         <  1:2092952/93‑1 (MQ=255)
 cTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACt                                                                                        >  2:4589062/1‑93 (MQ=255)
  tCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTg                                                                                       <  2:2333553/93‑1 (MQ=255)
   cGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTgg                                                                                      <  1:1610086/93‑1 (MQ=255)
   cGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTgg                                                                                      <  2:621320/93‑1 (MQ=255)
    gctagctaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGt                                                                                     <  2:6027992/93‑1 (MQ=255)
    gctagctaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGt                                                                                     <  2:4446147/93‑1 (MQ=255)
     ctagctaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTc                                                                                    <  1:996062/93‑1 (MQ=255)
     ctagctaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTc                                                                                    >  2:3622351/1‑93 (MQ=255)
     ctagctaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTc                                                                                    >  1:2682080/1‑93 (MQ=255)
     ctagctaCCGGCCATCACGTGGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTc                                                                                    <  1:327823/93‑1 (MQ=255)
       agctaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGa                                                                                  <  2:5500879/93‑1 (MQ=255)
        gctaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGaa                                                                                 >  1:816341/1‑93 (MQ=255)
        actaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGaa                                                                                 <  2:6362893/92‑1 (MQ=255)
         ctaTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAag                                                                                <  2:4356638/93‑1 (MQ=255)
          taTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGCaga                                                                               >  2:4823699/1‑93 (MQ=255)
          taTCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAaga                                                                               <  1:5054315/93‑1 (MQ=255)
              ggCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAgaggag                                                                           <  1:4226121/93‑1 (MQ=255)
               gCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGc                                                                          >  2:4074978/1‑93 (MQ=255)
               gCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGc                                                                          >  2:4610090/1‑93 (MQ=255)
               gCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGc                                                                          >  2:89522/1‑93 (MQ=255)
                ccATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCa                                                                         <  1:4632034/93‑1 (MQ=255)
                 cATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCaa                                                                        <  2:6287379/93‑1 (MQ=255)
                 cATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCaa                                                                        >  1:6243109/1‑93 (MQ=255)
                  aTCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAg                                                                       >  1:2377581/1‑93 (MQ=255)
                  aTCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAg                                                                       >  1:1344197/1‑93 (MQ=255)
                   tCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGc                                                                      >  1:736059/1‑93 (MQ=255)
                       gTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGa                                                                  <  1:1211658/93‑1 (MQ=255)
                        ttGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGAc                                                                 <  2:4873631/93‑1 (MQ=255)
                        ttGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGAc                                                                 <  2:1553751/93‑1 (MQ=255)
                           gCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTa                                                              >  2:3685958/1‑93 (MQ=255)
                           gCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTa                                                              <  1:3541221/93‑1 (MQ=255)
                           gCGTGATTGATTGGCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTa                                                              <  2:1237111/93‑1 (MQ=255)
                            cGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTaa                                                             <  2:3185700/93‑1 (MQ=255)
                             gTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGGCCGACGTAAg                                                            >  1:2900523/1‑93 (MQ=255)
                             gTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAg                                                            <  2:934171/93‑1 (MQ=255)
                              tgattgatTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGa                                                           <  1:5313273/93‑1 (MQ=255)
                               gattgattGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCGCGACGGAAGAt                                                          >  1:451592/1‑93 (MQ=255)
                                attgattgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATg                                                         <  1:149593/93‑1 (MQ=255)
                                attcattgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATg                                                         <  2:1784670/93‑1 (MQ=255)
                                 ttgattgTCGGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTTTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGc                                                        <  2:650363/93‑1 (MQ=255)
                                  tgattgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTTTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCt                                                       <  1:3971295/93‑1 (MQ=255)
                                  tgattgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCt                                                       >  2:1431770/1‑93 (MQ=255)
                                   tattgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTg                                                      <  2:3364635/92‑1 (MQ=255)
                                    attgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTgg                                                     <  2:850783/93‑1 (MQ=255)
                                     ttgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTggg                                                    <  2:5356370/93‑1 (MQ=255)
                                      tgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTgggg                                                   <  1:5717113/93‑1 (MQ=255)
                                      tgTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTgggg                                                   >  1:1853913/1‑93 (MQ=255)
                                       gTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTggggg                                                  >  2:780367/1‑93 (MQ=255)
                                       gTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTggggg                                                  >  1:5884952/1‑93 (MQ=255)
                                        tCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGt                                                 <  1:2113042/93‑1 (MQ=255)
                                        tCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGt                                                 <  1:2813414/93‑1 (MQ=255)
                                          tGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGtga                                               >  1:3075741/1‑93 (MQ=255)
                                          tGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGtga                                               >  1:6062801/1‑93 (MQ=255)
                                          tGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGtga                                               <  1:1028692/93‑1 (MQ=255)
                                           gAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGtgat                                              >  1:4821982/1‑93 (MQ=255)
                                            aaTGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGggatg                                             >  1:4379864/1‑93 (MQ=255)
                                             aTGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGtgatga                                            <  2:1853913/93‑1 (MQ=255)
                                                 cGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACttt                                        <  1:2249665/93‑1 (MQ=255)
                                                 cGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGGGATGACttt                                        >  1:2007249/1‑93 (MQ=255)
                                                  gCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACtttt                                       <  2:2041653/93‑1 (MQ=255)
                                                   ccTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTg                                      <  1:661743/93‑1 (MQ=255)
                                                   ccTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTg                                      <  2:5636556/93‑1 (MQ=255)
                                                   ccTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTg                                      <  1:301432/93‑1 (MQ=255)
                                                   ccTTCCGCTGCCCACTGACGGAATACGAAAATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGGGATGACTTTTg                                      >  1:4927717/1‑93 (MQ=255)
                                                    cTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTgg                                     <  2:5298608/93‑1 (MQ=255)
                                                     ttCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTggg                                    >  2:5112381/1‑92 (MQ=255)
                                                     ttCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGt                                    <  2:245802/93‑1 (MQ=255)
                                                       ccGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTgg                                  >  2:5441698/1‑92 (MQ=255)
                                                       ccGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTga                                  <  2:4674634/93‑1 (MQ=255)
                                                       ccGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGGGATGACTTTTGGTga                                  >  1:2855134/1‑93 (MQ=255)
                                                        cGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTgag                                 >  2:6133090/1‑93 (MQ=255)
                                                        cGCTGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTgag                                 <  1:2432626/93‑1 (MQ=255)
                                                           tGCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGGGATGACTTTTGGTGAGAtt                              >  2:3437293/1‑93 (MQ=255)
                                                            gCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTg                             <  2:3724630/93‑1 (MQ=255)
                                                            gCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTg                             >  1:4066479/1‑93 (MQ=255)
                                                            gCCCACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTg                             <  2:2819310/93‑1 (MQ=255)
                                                            gCCCACTAACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTg                             <  1:4025722/93‑1 (MQ=255)
                                                             cccACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGt                            <  2:2126510/93‑1 (MQ=255)
                                                              ccACTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGtt                           <  1:3974493/93‑1 (MQ=255)
                                                                aCTGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTAt                         >  2:3051094/1‑93 (MQ=255)
                                                                  tGACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTg                       <  1:4165552/93‑1 (MQ=255)
                                                                   gACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGa                      >  1:2036624/1‑93 (MQ=255)
                                                                   gACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGa                      >  2:5806654/1‑93 (MQ=255)
                                                                   gACGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCCACATAAGATGCTGGGGGAGATGACTTTTGGGGAGATTGTTATTGa                      >  1:1700146/1‑93 (MQ=255)
                                                                    aCGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGAc                     <  1:2667897/93‑1 (MQ=255)
                                                                     cGGAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACg                    >  2:5679287/1‑93 (MQ=255)
                                                                      ggAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACgc                   <  1:51116/93‑1 (MQ=255)
                                                                      ggAATACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACgc                   <  1:3239642/93‑1 (MQ=255)
                                                                         aTACGAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACgccag                >  2:4926264/1‑93 (MQ=255)
                                                                             gAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCcac            >  1:1299551/1‑93 (MQ=255)
                                                                             gAAGATTGGCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGGGATGACTTTTGGTGAGATTGTTATTGACGCCAGCcac            >  2:2611173/1‑93 (MQ=255)
                                                                                    ggCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGccc     <  2:1769223/93‑1 (MQ=255)
                                                                                    ggCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGccc     <  1:5400245/93‑1 (MQ=255)
                                                                                    ggCTTGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGccc     <  2:4946791/93‑1 (MQ=255)
                                                                                       ttGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGCCCTGt  >  2:4199124/1‑93 (MQ=255)
                                                                                       ttGTACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGCCCTGt  >  1:5424443/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGCACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGCCCTGT  >  NC_000913/2609577‑2609756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: