Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,744,399 T→C intergenic (‑194/+55) rpsP ← / ← ffh 30S ribosomal subunit protein S16/FFh

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,744,3990TC100.0% 715.0 / NA 208intergenic (‑194/+55)rpsP/ffh30S ribosomal subunit protein S16/FFh
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (97/111);  total (97/111)

Only 100 of 214 total aligned reads displayed.

TCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCT  >  NC_000913/2744309‑2744488
                                                                                          |                                                                                         
tCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCAc                                                                                         <  2:1071866/93‑1 (MQ=255)
tCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCAc                                                                                         <  2:1789705/93‑1 (MQ=255)
tCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCAc                                                                                         >  2:5160154/1‑93 (MQ=255)
 cAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACg                                                                                        <  1:2744416/93‑1 (MQ=255)
  aaCAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGt                                                                                       <  2:6387299/93‑1 (MQ=255)
  aaCAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGt                                                                                       >  2:5850842/1‑93 (MQ=255)
   aCAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTg                                                                                      >  2:5193687/1‑93 (MQ=255)
      gTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAgg                                                                                   >  1:1010827/1‑93 (MQ=255)
        tGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGAt                                                                                 <  2:5716456/93‑1 (MQ=255)
        tGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGAt                                                                                 <  1:4710432/93‑1 (MQ=255)
        tGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGAt                                                                                 >  1:1955175/1‑93 (MQ=255)
         gCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATg                                                                                >  1:675010/1‑93 (MQ=255)
         gCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATg                                                                                <  2:2641617/93‑1 (MQ=255)
         gCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATg                                                                                <  2:2543178/93‑1 (MQ=255)
          cTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGa                                                                               >  1:2933892/1‑93 (MQ=255)
          cTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGa                                                                               <  2:2409581/93‑1 (MQ=255)
           tAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGAc                                                                              <  1:1564632/93‑1 (MQ=255)
           tAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGAc                                                                              >  2:5061426/1‑93 (MQ=255)
            aaCTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACg                                                                             >  2:6261976/1‑93 (MQ=255)
             aCTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGa                                                                            >  1:2424054/1‑93 (MQ=255)
                ctgctgTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGca                                                                         >  1:5793028/1‑93 (MQ=255)
                      tAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATccc                                                                   <  2:3143626/93‑1 (MQ=255)
                      tAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATccc                                                                   >  1:1388216/1‑93 (MQ=255)
                       aaaaGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCg                                                                  >  2:3340267/1‑93 (MQ=255)
                       aaaaGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCg                                                                  >  1:3838133/1‑93 (MQ=255)
                           ggCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGc                                                              <  2:1678957/93‑1 (MQ=255)
                           ggCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGc                                                              >  2:1058025/1‑93 (MQ=255)
                            gCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGcc                                                             <  2:3239798/93‑1 (MQ=255)
                             ccGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCa                                                            <  1:1049764/93‑1 (MQ=255)
                              cGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCaa                                                           >  1:4361088/1‑93 (MQ=255)
                                tCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCaaaa                                                         >  2:5684441/1‑93 (MQ=255)
                                tCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCaaaa                                                         <  1:5592105/93‑1 (MQ=255)
                                 cggcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAAt                                                        <  2:2314004/93‑1 (MQ=255)
                                  ggcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATg                                                       <  2:1301302/93‑1 (MQ=255)
                                  ggcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATg                                                       <  1:510472/93‑1 (MQ=255)
                                   gcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATgg                                                      <  2:4637902/93‑1 (MQ=255)
                                   gcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATgg                                                      >  1:4855806/1‑93 (MQ=255)
                                   gcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATgg                                                      >  1:1107788/1‑93 (MQ=255)
                                     ggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCa                                                    <  2:4447213/93‑1 (MQ=255)
                                     ggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCa                                                    >  2:5365593/1‑93 (MQ=255)
                                     ggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCa                                                    <  2:5586238/93‑1 (MQ=255)
                                        gCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGGCGAGCACATCCCGGTGCCAAAATGGCAAAc                                                 <  2:6471823/93‑1 (MQ=255)
                                          aGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACaa                                               >  2:2614226/1‑93 (MQ=255)
                                          aGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACaa                                               >  1:3744693/1‑93 (MQ=255)
                                           gCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAg                                              >  2:3805338/1‑93 (MQ=255)
                                            ccAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGc                                             <  2:6116755/93‑1 (MQ=255)
                                            ccAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGc                                             <  1:5989586/93‑1 (MQ=255)
                                             cAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGcc                                            <  2:4193265/93‑1 (MQ=255)
                                             cAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGcc                                            <  1:3072333/93‑1 (MQ=255)
                                               gTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGTCGAGCACATCCCGGCGCCAAAATGGCAAACAAGCCAg                                          >  1:5656257/1‑93 (MQ=255)
                                               gTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAg                                          <  1:794597/93‑1 (MQ=255)
                                                tttGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAgg                                         >  2:3391847/1‑93 (MQ=255)
                                                  tGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGcc                                       <  2:1194293/93‑1 (MQ=255)
                                                      gCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGAtt                                   <  1:3263611/93‑1 (MQ=255)
                                                      gCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGAtt                                   <  1:3647124/93‑1 (MQ=255)
                                                       ccGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTa                                  >  2:2445625/1‑93 (MQ=255)
                                                         ggAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGc                                <  1:430822/93‑1 (MQ=255)
                                                         ggAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGc                                >  2:3674736/1‑93 (MQ=255)
                                                          gAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCg                               >  2:1529147/1‑93 (MQ=255)
                                                          gAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCg                               <  2:635533/93‑1 (MQ=255)
                                                            gTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGAc                             >  2:493367/1‑93 (MQ=255)
                                                            gTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGAc                             <  2:6341844/93‑1 (MQ=255)
                                                            gTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGAc                             <  2:3940738/93‑1 (MQ=255)
                                                            gTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGAc                             >  1:4826989/1‑93 (MQ=255)
                                                             tGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGAcc                            >  2:3991072/1‑93 (MQ=255)
                                                             tGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCAAAAATGGCAAACAAGCCAGGCCGATTAGCGAcc                            <  1:5123287/93‑1 (MQ=255)
                                                              gcgcgcAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCa                           <  1:1594289/93‑1 (MQ=255)
                                                              gcgcgcAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCa                           <  1:864461/93‑1 (MQ=255)
                                                              gcgcgcAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCa                           <  2:3178297/93‑1 (MQ=255)
                                                               cgcgcAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAg                          <  2:834477/93‑1 (MQ=255)
                                                               cgcgcAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAg                          <  2:5960155/93‑1 (MQ=255)
                                                                gcgcAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAgg                         <  2:483962/93‑1 (MQ=255)
                                                                   cAGTCACCGGAGCGTACACGCAGCACGTGAAGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGaa                      <  2:2017856/93‑1 (MQ=255)
                                                                    aGTCCCGGGAGCAAACCCGCAGCACGGAATAATGACGACCGCATCCGGGTCCGAAAAGGCAAAACAAGCCAGGCCGATGAGCGACCAGGGAAg                     <  2:47495/93‑1 (MQ=255)
                                                                     gTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGc                    >  2:2035491/1‑93 (MQ=255)
                                                                      tCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGcc                   <  2:2810649/93‑1 (MQ=255)
                                                                      tCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGcc                   <  1:3243814/93‑1 (MQ=255)
                                                                      tCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGcc                   <  1:6444752/93‑1 (MQ=255)
                                                                      tCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGcc                   <  1:422397/93‑1 (MQ=255)
                                                                        aCCGGAACGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTg                 <  1:3894134/93‑1 (MQ=255)
                                                                         ccGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgg                <  1:5724211/93‑1 (MQ=255)
                                                                          cGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTggg               >  1:6189123/1‑93 (MQ=255)
                                                                           ggAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgggg              >  1:3305679/1‑93 (MQ=255)
                                                                           ggAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgggg              >  1:1768828/1‑93 (MQ=255)
                                                                            gAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCGAGGCCGATTAGCGACCAGGGAAGCCTggggg             <  2:2940718/93‑1 (MQ=255)
                                                                            gAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTggggg             <  1:5389528/93‑1 (MQ=255)
                                                                             aGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGc            <  1:3102715/93‑1 (MQ=255)
                                                                              gCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGca           >  1:1297811/1‑93 (MQ=255)
                                                                               cGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcat          <  2:145778/93‑1 (MQ=255)
                                                                                gTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGGAAATAAGCCCGGCTGATTAGCGACCAGGGAAGCCTGGGGGcatc         <  1:2086877/93‑1 (MQ=255)
                                                                                gTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcatc         >  1:3671499/1‑93 (MQ=255)
                                                                                 tACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcatca        >  1:2190450/1‑93 (MQ=255)
                                                                                 tACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcatca        <  2:2180130/93‑1 (MQ=255)
                                                                                 tACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcatca        >  1:2319284/1‑93 (MQ=255)
                                                                                  acacGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCTGGGAAGCCTGGGGGcatcat       <  1:1439575/93‑1 (MQ=255)
                                                                                  acacGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcatcat       <  1:3573907/93‑1 (MQ=255)
                                                                                  acacGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcatcat       >  2:4236740/1‑93 (MQ=255)
                                                                                  acacGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcatcat       <  2:4137475/93‑1 (MQ=255)
                                                                                   cacGCACCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATa      <  2:3030836/93‑1 (MQ=255)
                                                                                       cAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCt  <  1:2135118/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCT  >  NC_000913/2744309‑2744488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: