BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	264,081	T→C	H117R (CAC→CGC)	yafX ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	264,081	0	T	C	100.0%	819.3 / NA	236	H117R (CAC→CGC)	yafX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (117/119); total (117/119)

Only 100 of 250 total aligned reads displayed.

ATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCAT  >  NC_000913/263991‑264170

aTGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCAtggcgg                                                                                         <  1:3136438/93‑1 (MQ=255)

 tGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATggcggc                                                                                        <  2:1846372/93‑1 (MQ=255)

  ggCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCt                                                                                       <  1:5454172/93‑1 (MQ=255)

    cGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCtat                                                                                     <  2:6448185/93‑1 (MQ=255)

    cGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCtat                                                                                     <  1:6250137/93‑1 (MQ=255)

     gTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCtata                                                                                    >  2:2900827/1‑93 (MQ=255)

      tGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATAc                                                                                   <  1:6435837/93‑1 (MQ=255)

       gAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATTGCGTCACATTCTGTACGGCAGGTATTGCTGCtatatg                                                                                  >  1:2959464/1‑91 (MQ=38)

        aGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGc                                                                                 >  1:2824217/1‑93 (MQ=255)

         gCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCa                                                                                >  1:6008283/1‑93 (MQ=255)

         gCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCa                                                                                >  2:4933541/1‑93 (MQ=255)

          ccTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCaa                                                                               >  1:4447507/1‑93 (MQ=255)

          ccTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCaa                                                                               >  2:1962458/1‑93 (MQ=255)

           ctctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAAt                                                                              <  2:5143887/93‑1 (MQ=255)

           ctctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAAt                                                                              <  2:2964950/93‑1 (MQ=255)

            tctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATc                                                                             <  2:5534693/93‑1 (MQ=255)

            tctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATc                                                                             >  2:5308043/1‑93 (MQ=255)

            tctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATc                                                                             <  1:5211809/93‑1 (MQ=255)

            tctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATc                                                                             >  2:405313/1‑93 (MQ=255)

            tctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATc                                                                             <  1:1766230/93‑1 (MQ=255)

            tctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATc                                                                             <  2:1114726/93‑1 (MQ=255)

             ctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATAAGCAAtta                                                                            >  1:3064469/1‑91 (MQ=255)

             ctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATAAGCAATCa                                                                            >  1:6031029/1‑93 (MQ=255)

              tGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAg                                                                           >  1:4273383/1‑93 (MQ=255)

              tGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAg                                                                           >  1:551614/1‑93 (MQ=255)

              tGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAg                                                                           >  1:101822/1‑93 (MQ=255)

              tGGATGTCGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCGCTCAg                                                                           <  2:3199720/93‑1 (MQ=38)

               ggATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAgg                                                                          <  2:6160607/93‑1 (MQ=255)

                gATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGc                                                                         <  1:2704954/93‑1 (MQ=255)

                gATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGc                                                                         >  2:2136413/1‑93 (MQ=255)

                 aTGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCa                                                                        <  1:1308677/93‑1 (MQ=255)

                    ttGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGAc                                                                     <  2:4750854/93‑1 (MQ=255)

                      gCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAg                                                                   <  2:4531370/93‑1 (MQ=255)

                        aTGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCa                                                                 >  2:2398520/1‑93 (MQ=255)

                         tGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCaa                                                                >  2:2051319/1‑93 (MQ=255)

                         tGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCaa                                                                >  1:5044415/1‑93 (MQ=255)

                          ggCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAAt                                                               >  2:4128203/1‑93 (MQ=255)

                          ggCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAAt                                                               <  2:1414905/93‑1 (MQ=255)

                           gCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATa                                                              >  1:582356/1‑93 (MQ=255)

                           gCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATa                                                              >  1:4127708/1‑93 (MQ=255)

                           gCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATa                                                              <  2:750376/93‑1 (MQ=255)

                              tACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACct                                                           >  2:4886718/1‑93 (MQ=255)

                              tACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACct                                                           >  1:433964/1‑93 (MQ=255)

                                  cccGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACctgctg                                                       >  2:4375562/1‑93 (MQ=255)

                                    cGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTgctgct                                                     <  2:363690/93‑1 (MQ=255)

                                    cGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTgctgct                                                     >  2:3790764/1‑93 (MQ=255)

                                    cGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTgctgct                                                     <  2:1745046/93‑1 (MQ=255)

                                    cGCAGGAGGTAATAGTGTGCGGTCATCGCGTCACATGCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTtctgct                                                     <  1:1659878/93‑1 (MQ=37)

                                       aGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCt                                                  >  2:242727/1‑93 (MQ=255)

                                       aGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCt                                                  <  1:2557882/93‑1 (MQ=255)

                                       aGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCt                                                  <  2:2681585/93‑1 (MQ=255)

                                       aGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCt                                                  >  2:6056947/1‑93 (MQ=255)

                                       aGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCt                                                  >  1:2346667/1‑93 (MQ=255)

                                        ggCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGGAATCAGGCAGACAGAAATATCTGCTGGTTCTg                                                 >  2:4258374/1‑93 (MQ=255)

                                        ggCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTg                                                 >  1:2337747/1‑93 (MQ=255)

                                         gCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGc                                                <  2:2489929/93‑1 (MQ=255)

                                             tAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTc                                            <  2:2763963/93‑1 (MQ=255)

                                               aTAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCAt                                          >  1:2460205/1‑93 (MQ=255)

                                                tAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCAtt                                         <  1:4393492/93‑1 (MQ=255)

                                                  gtgtGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTg                                       >  2:88340/1‑93 (MQ=255)

                                                  gtgtGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTg                                       <  1:707337/93‑1 (MQ=255)

                                                  gtgtGCGGTCATCGCGTCACATTCTGTACGGCAGGAATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTg                                       <  2:4236776/93‑1 (MQ=255)

                                                        ggTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATc                                 >  1:4726209/1‑93 (MQ=255)

                                                        ggTCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATc                                 <  1:1593796/93‑1 (MQ=255)

                                                          tCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGt                               <  1:4223850/93‑1 (MQ=255)

                                                          tCATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGt                               <  1:6162798/93‑1 (MQ=255)

                                                           cATCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGtt                              <  2:545580/93‑1 (MQ=255)

                                                            aTCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTa                             >  1:5587052/1‑93 (MQ=255)

                                                            aTCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTa                             >  2:4141582/1‑93 (MQ=255)

                                                            aTCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAAACAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTa                             >  1:1015516/1‑93 (MQ=255)

                                                             tCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTAc                            <  1:5904707/93‑1 (MQ=255)

                                                             tCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTAc                            >  1:3793397/1‑93 (MQ=255)

                                                             tCGCGTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTAc                            <  2:166003/93‑1 (MQ=255)

                                                               gcgTCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCg                          >  1:5751007/1‑93 (MQ=255)

                                                                  tCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTc                       >  2:6079470/1‑93 (MQ=255)

                                                                  tCACATTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTc                       >  2:5406660/1‑93 (MQ=255)

                                                                   cacaTTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTg                                                 <  1:222703/66‑1 (MQ=255)

                                                                   cacaTTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCa                      >  2:3551259/1‑93 (MQ=255)

                                                                   cacaTTCTGTACGGCAGCCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCa                      <  1:3478377/93‑1 (MQ=255)

                                                                    acaTTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAg                     >  1:916433/1‑93 (MQ=255)

                                                                     caTTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAgg                    >  1:2445747/1‑93 (MQ=255)

                                                                      aTTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGc                   >  2:3010860/1‑93 (MQ=255)

                                                                      aTTCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATAACTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGc                   >  2:566660/1‑93 (MQ=255)

                                                                       ttCTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCa                  <  2:502223/93‑1 (MQ=255)

                                                                       ttCTGTACGGCAGGCATGGCGGCTATACGCAATCAAGCAGACAGCACTACCTGCTGCTTCTGAACTCATTTGGGCATCGTTACCGTTCAGGCa                  >  2:2719870/1‑93 (MQ=255)

                                                                         cTGTACGGCAGGCATGGCGGTTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGt                <  2:486378/93‑1 (MQ=255)

                                                                         cTGTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGt                >  2:3836299/1‑93 (MQ=255)

                                                                           gTACGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTa              >  1:3601015/1‑93 (MQ=255)

                                                                             aCGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTaaa            <  2:2249290/93‑1 (MQ=255)

                                                                              cGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAAc           <  2:3923064/93‑1 (MQ=255)

                                                                              cGGCAGGCATGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAAc           <  2:30874/93‑1 (MQ=255)

                                                                               ggcaggcaTGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACa          >  1:5689310/1‑93 (MQ=255)

                                                                                gcaggcaTGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAg         >  2:1486119/1‑93 (MQ=255)

                                                                                  aggcaTGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGAc       >  1:530610/1‑93 (MQ=255)

                                                                                   ggcaTGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACg      >  1:3836300/1‑93 (MQ=255)

                                                                                   ggcaTGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACg      >  1:4812133/1‑93 (MQ=255)

                                                                                   ggcaTGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACg      >  2:4105347/1‑93 (MQ=255)

                                                                                    gcaTGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGc     <  2:5748881/93‑1 (MQ=255)

                                                                                      aTGGCGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCa   <  1:2201827/93‑1 (MQ=255)

                                                                                       tggcggCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCAt  <  2:3953803/93‑1 (MQ=255)

ATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCAT  >  NC_000913/263991‑264170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`