Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,967,341 T→C intergenic (‑342/‑343) ygdP ← / → mutH putative invasion protein/methyl‑directed mismatch repair

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,967,3410TC100.0% 754.0 / NA 213intergenic (‑342/‑343)ygdP/mutHputative invasion protein/methyl‑directed mismatch repair
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (134/79);  total (134/79)

Only 100 of 216 total aligned reads displayed.

AAAATATTCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGTTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTTCGTCGCAC  >  NC_000913/2967251‑2967430
                                                                                          |                                                                                         
aaaaTATTCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTg                                                                                         <  1:2185726/93‑1 (MQ=255)
aaaaTATTCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTg                                                                                         >  2:3455038/1‑93 (MQ=255)
aaaaTATTCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTg                                                                                         <  2:4855110/93‑1 (MQ=255)
  aaTATTCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGc                                                                                       <  1:4303520/93‑1 (MQ=255)
  aaTATTCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGc                                                                                       >  2:128998/1‑93 (MQ=255)
   atatTCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCg                                                                                      >  2:3627684/1‑93 (MQ=255)
      ttCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGaaa                                                                                   >  2:4502281/1‑93 (MQ=255)
       tCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAg                                                                                  >  1:547214/1‑93 (MQ=255)
        cATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGa                                                                                 >  1:3373994/1‑93 (MQ=255)
         aTTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGAt                                                                                <  2:6377258/93‑1 (MQ=255)
          ttATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATc                                                                               >  2:81814/1‑93 (MQ=255)
           tATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCa                                                                              >  2:1129073/1‑93 (MQ=255)
            aTCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCaa                                                                             >  1:4144144/1‑93 (MQ=255)
            aTCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCaa                                                                             <  2:2185100/93‑1 (MQ=255)
             tCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAAc                                                                            >  1:2373191/1‑93 (MQ=255)
             tCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAAc                                                                            >  1:2468190/1‑93 (MQ=255)
              cAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAAcc                                                                           <  1:2049172/93‑1 (MQ=255)
              cAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAAcc                                                                           >  1:2958935/1‑93 (MQ=255)
               aGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAGCCa                                                                          <  1:3238113/93‑1 (MQ=255)
               aGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCa                                                                          >  2:438875/1‑93 (MQ=255)
                gTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCaa                                                                         >  2:1878072/1‑93 (MQ=255)
                   aaTGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGc                                                                      >  2:5542829/1‑93 (MQ=255)
                   aaTGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGc                                                                      >  1:6018690/1‑93 (MQ=255)
                   aaTGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGc                                                                      >  1:4514741/1‑93 (MQ=255)
                      gCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATACACCAATGCCGt                                                                   >  1:1316778/1‑93 (MQ=255)
                       cATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTa                                                                  <  2:854588/93‑1 (MQ=255)
                        aTTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATTAACCAATGCCGTAt                                                                 >  1:4597322/1‑93 (MQ=255)
                        aTTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAt                                                                 >  2:4961357/1‑93 (MQ=255)
                        aTTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAt                                                                 >  1:45178/1‑93 (MQ=255)
                        aTTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAt                                                                 <  1:1015871/93‑1 (MQ=255)
                        aTTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAt                                                                 <  2:5194110/93‑1 (MQ=255)
                        aTTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAt                                                                 <  1:3860431/93‑1 (MQ=255)
                        aTTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAt                                                                 >  1:1465557/1‑93 (MQ=255)
                        aTTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAt                                                                 >  1:3540600/1‑93 (MQ=255)
                          tACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAttt                                                               >  1:1265711/1‑93 (MQ=255)
                          tACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTAttt                                                               >  1:4246149/1‑93 (MQ=255)
                             aTGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATc                                                            >  1:6139003/1‑93 (MQ=255)
                               gTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCca                                                          <  2:2140680/93‑1 (MQ=255)
                               gTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCca                                                          >  1:5014932/1‑93 (MQ=255)
                               gTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCca                                                          >  1:339772/1‑93 (MQ=255)
                                  aTTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTTGCGAAAGATCAACCAATGCCGTATTTATCCACAg                                                       >  2:2447921/1‑93 (MQ=255)
                                  aTTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAg                                                       >  1:669092/1‑93 (MQ=255)
                                    tttAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGaa                                                     >  1:2585142/1‑93 (MQ=255)
                                      tAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAAtg                                                   >  2:5139599/1‑93 (MQ=255)
                                      tAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAAtg                                                   <  2:2303462/93‑1 (MQ=255)
                                       aGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAAtgt                                                  <  2:6160936/93‑1 (MQ=255)
                                        gTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAAtgtg                                                 >  1:161198/1‑93 (MQ=255)
                                        gTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAAtgtg                                                 >  1:6450307/1‑93 (MQ=255)
                                          aaTGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGcc                                               <  1:3083434/93‑1 (MQ=255)
                                             gAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACt                                            >  2:1047662/1‑93 (MQ=255)
                                             gAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACt                                            >  1:4959542/1‑93 (MQ=255)
                                               aaaaGAGTAATTTGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTaa                                          >  1:5509343/1‑93 (MQ=255)
                                               aaaaGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTaa                                          >  2:1524581/1‑93 (MQ=255)
                                                aaaTAGTAATTCGTGCCCCAGGTCACAGCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAg                                         <  2:5430916/93‑1 (MQ=255)
                                                aaaGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAg                                         >  2:2751050/1‑93 (MQ=255)
                                                aaaGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAg                                         >  1:3806722/1‑93 (MQ=255)
                                                aaaGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAg                                         >  2:3578991/1‑93 (MQ=255)
                                                   gagTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTa                                      <  1:4172037/93‑1 (MQ=255)
                                                    agTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTaa                                     <  2:3771832/93‑1 (MQ=255)
                                                       aaTTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCa                                  >  2:3273285/1‑93 (MQ=255)
                                                       aaTTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCa                                  <  2:4677969/93‑1 (MQ=255)
                                                        aTTCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCAc                                 >  2:15822/1‑93 (MQ=255)
                                                         ttCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACt                                >  1:2793533/1‑93 (MQ=255)
                                                         ttCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGCTAAGCACt                                >  1:3958896/1‑93 (MQ=255)
                                                          tCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGTCACTAAGTTAAGCACTg                               <  1:1166027/93‑1 (MQ=255)
                                                          tCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTg                               <  2:2002216/93‑1 (MQ=255)
                                                          tCGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTg                               >  1:4695083/1‑93 (MQ=255)
                                                           cGTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGa                              <  1:2125296/93‑1 (MQ=255)
                                                            gTGACCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGaa                             >  1:1942682/1‑93 (MQ=255)
                                                               aCCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCa                          >  1:5178849/1‑93 (MQ=255)
                                                               aCCCAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCa                          >  2:3095609/1‑93 (MQ=255)
                                                                cccAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCAc                         <  1:5264785/93‑1 (MQ=255)
                                                                 ccAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACt                        <  2:5856538/93‑1 (MQ=255)
                                                                  cAGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTa                       >  2:4082869/1‑93 (MQ=255)
                                                                   aGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTaa                      <  1:4082721/93‑1 (MQ=255)
                                                                   aGGTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTaa                      >  1:5687504/1‑93 (MQ=255)
                                                                    ggTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTaaa                     >  1:94654/1‑93 (MQ=255)
                                                                    ggTCACACCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGACACTAAGTTAAGCACTGAACCACTaaa                     >  2:3904515/1‑93 (MQ=255)
                                                                       cacaCCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAAc                  <  1:4653712/93‑1 (MQ=255)
                                                                       cacaCCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAAc                  <  1:2628894/93‑1 (MQ=255)
                                                                       cacaCCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAAc                  >  2:3055045/1‑93 (MQ=255)
                                                                       cacaCCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAAc                  >  2:1385300/1‑93 (MQ=255)
                                                                        acacCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACt                 >  1:572257/1‑93 (MQ=255)
                                                                        acacCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACt                 <  2:2610130/93‑1 (MQ=255)
                                                                         cacCTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTg                >  1:5658008/1‑93 (MQ=255)
                                                                           ccTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGa              >  2:4585609/1‑93 (MQ=255)
                                                                           ccTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGa              <  1:6235063/93‑1 (MQ=255)
                                                                           ccTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGa              <  1:3304976/93‑1 (MQ=255)
                                                                           ccTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGa              <  1:785528/93‑1 (MQ=255)
                                                                           ccTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGa              >  2:1229698/1‑93 (MQ=255)
                                                                           ccTCTCATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGa              <  1:1415591/93‑1 (MQ=255)
                                                                               tcATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGttt          <  1:6031213/93‑1 (MQ=255)
                                                                                cATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTtc         <  1:6414311/93‑1 (MQ=255)
                                                                                cATTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTtc         <  2:2267788/93‑1 (MQ=255)
                                                                                 aTTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTtcg        >  1:4978065/1‑93 (MQ=255)
                                                                                 aTTTACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTtcg        >  2:5630501/1‑93 (MQ=255)
                                                                                  tttACGGGCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTtcgt       >  2:3169533/1‑93 (MQ=255)
                                                                                       gggCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTTCGTCGCaa  >  1:1753092/1‑92 (MQ=255)
                                                                                       gggCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTTCGTCGCAc  <  2:5601153/93‑1 (MQ=255)
                                                                                       gggCTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAAACACTAAAAACTGGAGTTTAGTCGCAc  >  2:6424030/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAAATATTCATTATCAGTCAATGCATTACATGTAATTTTAGTAATGAAAAAGAGTAATTCGTGACCCAGGTCACACCTCTCATTTACGGGTTGGCGAAAGATCAACCAATGCCGTATTTATCCACAGAATGTGCCACTAAGTTAAGCACTGAACCACTAAAAACTGGAGTTTCGTCGCAC  >  NC_000913/2967251‑2967430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: