Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,206,609 C→T S315S (AGC→AGT ygjE → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,6090CT99.5% 818.6 / NA 212S315S (AGC→AGTygjEhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (85/126);  total (86/126)
Fisher's exact test for biased strand distribution p-value = 4.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 219 total aligned reads displayed.

TGAAAAACGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTCTGGCTGGC  >  NC_000913/3206519‑3206698
                                                                                          |                                                                                         
 gAAAAACGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGtgtg                                                                                        >  1:163792/1‑93 (MQ=255)
 gAAAAACGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGtgtg                                                                                        >  2:4397000/1‑93 (MQ=255)
 gAAAAACGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGtgtg                                                                                        >  2:2326431/1‑93 (MQ=255)
  aaaaaCGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTgtgg                                                                                       <  1:4377032/93‑1 (MQ=255)
  aaaaaCGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTgtgg                                                                                       <  1:5196247/93‑1 (MQ=255)
   aaaaCGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTgtggt                                                                                      <  2:788234/93‑1 (MQ=255)
   aaaaCGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTgtggt                                                                                      <  1:4806080/93‑1 (MQ=255)
     aaCGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGtggtgg                                                                                    >  2:4801891/1‑93 (MQ=255)
       cGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCa                                                                                  >  2:6205255/1‑93 (MQ=255)
       cGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCa                                                                                  >  1:3493893/1‑93 (MQ=255)
        ggATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCAc                                                                                 <  2:5408653/93‑1 (MQ=255)
           tGCTGGTGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGa                                                                              >  2:1495134/1‑93 (MQ=255)
           tGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGa                                                                              >  2:262499/1‑93 (MQ=255)
             cTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtg                                                                            <  2:1390480/93‑1 (MQ=255)
               ggggCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtgct                                                                          <  2:4917749/93‑1 (MQ=255)
               ggggCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtgct                                                                          >  2:5775270/1‑93 (MQ=255)
                gggCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtgctg                                                                         <  1:4178562/93‑1 (MQ=255)
                gggCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtgctg                                                                         <  2:6156004/93‑1 (MQ=255)
                gggCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtgctg                                                                         >  1:3219359/1‑93 (MQ=255)
                 ggCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtgctgc                                                                        <  2:1682787/93‑1 (MQ=255)
                 ggCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtgctgc                                                                        <  2:1052959/93‑1 (MQ=255)
                 ggCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGAtgctgc                                                                        <  2:3372629/93‑1 (MQ=255)
                    tGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTc                                                                     <  2:1944582/93‑1 (MQ=255)
                    tGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTc                                                                     <  1:3834625/93‑1 (MQ=255)
                    tGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTc                                                                     >  2:2119/1‑93 (MQ=255)
                    tGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTc                                                                     <  1:2681837/93‑1 (MQ=255)
                     gATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCt                                                                    <  2:3507567/93‑1 (MQ=255)
                     gATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCt                                                                    >  1:5068707/1‑93 (MQ=255)
                     gATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTAAATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCt                                                                    >  2:4171136/1‑93 (MQ=255)
                       tGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTgc                                                                  <  2:5026590/93‑1 (MQ=255)
                        ggTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTgcg                                                                 >  2:4686223/1‑93 (MQ=255)
                         gTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTgcgc                                                                <  2:5795914/93‑1 (MQ=255)
                           aGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCAt                                                              <  2:4069504/93‑1 (MQ=255)
                           aGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCAt                                                              >  1:2887637/1‑93 (MQ=255)
                            ggCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCAtt                                                             <  2:5448329/93‑1 (MQ=255)
                            ggCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCAtt                                                             >  1:487154/1‑93 (MQ=255)
                            ggCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCAtt                                                             <  1:6316068/93‑1 (MQ=255)
                            ggCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCAtt                                                             <  1:2095834/93‑1 (MQ=255)
                             gcgcgcTGGTTCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTa                                                            <  1:5119088/93‑1 (MQ=255)
                             gcgcgcTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTa                                                            <  1:949225/93‑1 (MQ=255)
                                 gcTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAg                                                        >  2:3944667/1‑93 (MQ=255)
                                  cTGGTGCTGTGGATTTTCGGGGGTTATTATAACGATTCCGGCATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGt                                                       <  2:2166487/93‑1 (MQ=255)
                                  cTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGt                                                       >  1:5922538/1‑93 (MQ=255)
                                  cTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGt                                                       >  2:4020122/1‑93 (MQ=255)
                                   tGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGtt                                                      <  2:1594364/93‑1 (MQ=255)
                                    ggTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTg                                                     <  1:133362/93‑1 (MQ=255)
                                    ggTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTg                                                     >  1:1283624/1‑93 (MQ=255)
                                     gTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTgg                                                    <  2:1282081/93‑1 (MQ=255)
                                     gTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTgg                                                    <  1:5400021/93‑1 (MQ=255)
                                     gTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTgg                                                    <  1:849718/93‑1 (MQ=255)
                                     gTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTgg                                                    <  1:17778/93‑1 (MQ=255)
                                      tGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTggg                                                   <  2:5895845/93‑1 (MQ=255)
                                       gCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGga                                                  <  1:6365872/93‑1 (MQ=255)
                                       gCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGga                                                  >  1:3619274/1‑93 (MQ=255)
                                        cTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGgac                                                 <  2:5186603/93‑1 (MQ=255)
                                         tgtgGTTTGTCGGGGGTGATTATATCGATGCCGCGATGGTCGGTTAGAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGgacg                                                <  1:1240279/93‑1 (MQ=255)
                                          gtgGATTTTTGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGgacga                                               >  1:1199393/1‑93 (MQ=255)
                                          gtgGATTTTCGGCGGTGATATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGgacgac                                              <  2:532391/93‑1 (MQ=255)
                                             gATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACAt                                            >  1:6193394/1‑93 (MQ=255)
                                             gATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACAt                                            <  2:3763525/93‑1 (MQ=255)
                                                 tgcggcggTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTc                                        <  2:1535276/91‑1 (MQ=255)
                                                   cggcggTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAg                                      >  2:5979127/1‑93 (MQ=255)
                                                   cggcggTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAg                                      <  1:2628900/93‑1 (MQ=255)
                                                    ggcggTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGt                                     <  1:102292/93‑1 (MQ=255)
                                                      cggTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGtaa                                   <  1:2392184/93‑1 (MQ=255)
                                                      cggTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGtaa                                   <  2:2363597/93‑1 (MQ=255)
                                                       ggTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGtaat                                  >  1:1526395/1‑93 (MQ=255)
                                                        gTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGtaata                                 <  2:2253265/93‑1 (MQ=255)
                                                        gTGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGtaata                                 >  1:628319/1‑93 (MQ=255)
                                                         tGATTATATCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGtaataa                                >  2:1454852/1‑93 (MQ=255)
                                                             tataTCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAgcg                            <  1:4991888/93‑1 (MQ=255)
                                                              atatCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAgcgg                           >  1:4428026/1‑93 (MQ=255)
                                                               tatCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAgcggc                          <  2:2676609/93‑1 (MQ=255)
                                                               tatCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAgcggc                          >  1:5629546/1‑93 (MQ=255)
                                                                atCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAgcggcg                         <  2:3598383/93‑1 (MQ=255)
                                                                atCGATGCCGCGATGGTCGGTTACAGCGTGGGGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGTCGACATTGTCAGTCATAAAgcggcg                         >  1:1363471/1‑93 (MQ=255)
                                                                 tCGATGCCGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGt                        >  2:2883361/1‑93 (MQ=255)
                                                                 tCGATGCCCCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAgcggcgg                        >  2:2055055/1‑92 (MQ=255)
                                                                       ccGCGATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACg                  <  1:4941778/93‑1 (MQ=255)
                                                                        cgcgATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGt                 <  1:5785760/93‑1 (MQ=255)
                                                                        cgcgATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGt                 <  2:6024391/93‑1 (MQ=255)
                                                                         gcgATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGtt                >  1:410680/1‑93 (MQ=255)
                                                                         gcgATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGtt                <  1:1881024/93‑1 (MQ=255)
                                                                         gcgATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGtt                >  1:3967840/1‑93 (MQ=255)
                                                                         gcgATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGtt                <  2:4848679/93‑1 (MQ=255)
                                                                          cgATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGttt               <  1:3691559/93‑1 (MQ=255)
                                                                          cgATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGttt               <  1:2198514/93‑1 (MQ=255)
                                                                           gATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGtttt              >  1:6047076/1‑93 (MQ=255)
                                                                           gATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGtttt              <  2:3355483/93‑1 (MQ=255)
                                                                           gATGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGtttt              <  1:1986150/93‑1 (MQ=255)
                                                                            aTGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGttttt             >  2:3989347/1‑92 (MQ=255)
                                                                            aTGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTttc             <  2:6228299/93‑1 (MQ=255)
                                                                            aTGGTCGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTttc             >  1:2259786/1‑93 (MQ=255)
                                                                                 cGGTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTctg        <  1:221212/93‑1 (MQ=255)
                                                                                   gTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTctggc      <  2:5510434/93‑1 (MQ=255)
                                                                                   gTTACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTctggc      >  1:3606454/1‑93 (MQ=255)
                                                                                    ttACAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTctggct     <  1:3166344/93‑1 (MQ=255)
                                                                                      aCAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTctggctgg   >  2:64940/1‑93 (MQ=255)
                                                                                      aCAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTctggctgg   >  2:1872379/1‑93 (MQ=255)
                                                                                       cAGTGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTCtggctggc  >  1:1788419/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGAAAAACGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTCTGGCTGGC  >  NC_000913/3206519‑3206698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: