Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,446,406 G→A T134M (ACG→ATG)  rplP ← 50S ribosomal subunit protein L16

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,446,4060GA100.0% 1134.5 / NA 287T134M (ACG→ATG) rplP50S ribosomal subunit protein L16
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (132/155);  total (132/155)

Only 100 of 292 total aligned reads displayed.

GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT  >  NC_000913/3446316‑3446495
                                                                                          |                                                                                         
gTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATc                                                                                         >  2:5865115/1‑93 (MQ=255)
gTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATc                                                                                         <  2:5166770/93‑1 (MQ=255)
    aaCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAg                                                                                     <  1:4734681/93‑1 (MQ=255)
    aaCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAg                                                                                     >  2:5321185/1‑93 (MQ=255)
    aaCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAg                                                                                     >  2:3429578/1‑93 (MQ=255)
        gCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAc                                                                                 <  2:4935794/93‑1 (MQ=255)
        gCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAc                                                                                 <  2:1379821/93‑1 (MQ=255)
          tCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACaa                                                                               <  1:1597598/93‑1 (MQ=255)
           cACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACaaa                                                                              <  1:2616937/93‑1 (MQ=255)
            aCGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAg                                                                             <  1:3459282/93‑1 (MQ=255)
             cGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAgg                                                                            <  2:5906928/93‑1 (MQ=255)
             cGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAgg                                                                            <  2:3747477/93‑1 (MQ=255)
             cGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAgg                                                                            <  1:5994244/93‑1 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                           <  2:844387/93‑1 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                           <  2:3091217/93‑1 (MQ=255)
               cagcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtg                                                                          <  2:3168463/93‑1 (MQ=255)
               cagcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtg                                                                          >  1:2003188/1‑93 (MQ=255)
               cagcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtg                                                                          >  1:4799347/1‑93 (MQ=255)
                agcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtgg                                                                         >  1:4683840/1‑93 (MQ=255)
                agcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtgg                                                                         >  1:4288819/1‑93 (MQ=255)
                 gcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtggt                                                                        <  1:3666553/93‑1 (MQ=255)
                  cagGTTCAGCAGCTCGTTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGtt                                                                       <  2:3817857/93‑1 (MQ=255)
                   agGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGttt                                                                      >  2:2326129/1‑93 (MQ=255)
                    ggTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGtttt                                                                     >  1:2250639/1‑93 (MQ=255)
                     gTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTa                                                                    >  1:3169490/1‑93 (MQ=255)
                         agcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCg                                                                <  1:298030/93‑1 (MQ=255)
                         agcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCg                                                                >  2:110419/1‑93 (MQ=255)
                          gcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCgg                                                               >  2:4631034/1‑93 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             <  2:411975/93‑1 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             >  2:2183064/1‑93 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             <  2:5692753/93‑1 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             >  1:3497234/1‑93 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             <  1:2300969/93‑1 (MQ=255)
                             gcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAg                                                            >  2:2653668/1‑93 (MQ=255)
                             gcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAg                                                            >  1:2345650/1‑93 (MQ=255)
                             gcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAg                                                            >  1:2550817/1‑93 (MQ=255)
                              cTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGt                                                           <  1:4042135/93‑1 (MQ=255)
                              cTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGt                                                           <  1:1857959/93‑1 (MQ=255)
                              cTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGt                                                           <  1:2461056/93‑1 (MQ=255)
                                cGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGttt                                                         <  2:1560996/93‑1 (MQ=255)
                                cGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGttt                                                         <  2:4562884/93‑1 (MQ=255)
                                 ggTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTc                                                        <  1:3260563/93‑1 (MQ=255)
                                      tCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctgc                                                   <  1:6138926/93‑1 (MQ=255)
                                       cAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctgct                                                  >  2:5053705/1‑93 (MQ=255)
                                       cAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctgct                                                  <  2:521210/93‑1 (MQ=255)
                                        aGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGctgctg                                                 >  2:4727345/1‑93 (MQ=255)
                                         gCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCtgctgc                                                >  2:4481100/1‑93 (MQ=255)
                                          ctctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGcc                                               <  2:1875422/93‑1 (MQ=255)
                                           tctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCa                                              <  2:2003865/93‑1 (MQ=255)
                                            ctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAg                                             >  2:4848156/1‑93 (MQ=255)
                                             ttCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGc                                            <  2:6367098/93‑1 (MQ=255)
                                              tCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCt                                           <  1:1432230/93‑1 (MQ=255)
                                               cAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCtt                                          <  1:980594/93‑1 (MQ=255)
                                               cAACGCTCTTCTCACGCAGATCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCtt                                          >  1:6240261/1‑93 (MQ=255)
                                                aaCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTg                                         >  1:291750/1‑93 (MQ=255)
                                                aaCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTg                                         >  1:4773761/1‑93 (MQ=255)
                                                aaCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTg                                         <  1:4584838/93‑1 (MQ=255)
                                                aaCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGCTACAAAGGCGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTg                                         >  2:2356427/1‑93 (MQ=255)
                                                 aCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGa                                        >  1:3963361/1‑93 (MQ=255)
                                                   gCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAAt                                      <  1:529643/93‑1 (MQ=255)
                                                    ctctTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGAGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATg                                     >  2:245443/1‑93 (MQ=255)
                                                     tcttctCACGCAGCTCTTTTGCTGTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGc                                    <  1:1036924/93‑1 (MQ=255)
                                                      cttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCt                                   <  1:150896/93‑1 (MQ=255)
                                                       ttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCtt                                  >  2:3276594/1‑93 (MQ=255)
                                                       ttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCtt                                  <  2:5750744/93‑1 (MQ=255)
                                                          tcACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCAc                               <  2:6056195/93‑1 (MQ=255)
                                                            aCGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACgg                             >  2:5511377/1‑93 (MQ=255)
                                                              gCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGc                           <  1:1277234/93‑1 (MQ=255)
                                                               cAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGcc                          >  1:3305259/1‑93 (MQ=255)
                                                                aGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCa                         <  1:2091996/93‑1 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                        >  1:243146/1‑93 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                        >  2:424810/1‑93 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                        >  2:6312574/1‑93 (MQ=255)
                                                                  ctctTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGc                       >  2:5717445/1‑93 (MQ=255)
                                                                   tctTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGct                      <  1:1005074/93‑1 (MQ=255)
                                                                    ctTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctc                     <  1:2838055/93‑1 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACCAAGGTGGGTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                    >  1:5765125/1‑93 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                    >  1:936568/1‑93 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                    <  1:951044/93‑1 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                    >  1:4378457/1‑93 (MQ=255)
                                                                      tttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCtt                   <  2:3609922/93‑1 (MQ=255)
                                                                      tttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCtt                   >  1:5544471/1‑93 (MQ=255)
                                                                       ttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTc                  <  2:2510126/93‑1 (MQ=255)
                                                                       ttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTc                  <  1:4183166/93‑1 (MQ=255)
                                                                       ttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTc                  <  2:1257595/93‑1 (MQ=255)
                                                                        tgttttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTcc                 <  1:1115945/90‑1 (MQ=255)
                                                                        tGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTcc                 <  1:5022558/93‑1 (MQ=255)
                                                                        tGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTcc                 <  2:397799/93‑1 (MQ=255)
                                                                           tttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGa              >  1:5426354/1‑93 (MQ=255)
                                                                           tttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGa              <  2:1636361/93‑1 (MQ=255)
                                                                            ttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGaa             <  1:6342257/93‑1 (MQ=255)
                                                                             tCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGTCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAac            >  2:2878771/1‑93 (MQ=255)
                                                                              cATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAacc           >  2:3713360/1‑92 (MQ=255)
                                                                              cATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAaca           >  1:5678135/1‑93 (MQ=255)
                                                                               aTTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAacac          >  1:1176098/1‑93 (MQ=255)
                                                                                 tACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCg        <  2:3794669/93‑1 (MQ=255)
                                                                                   cATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTc      >  1:700263/1‑93 (MQ=255)
                                                                                    aTCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTcc     <  2:1730743/93‑1 (MQ=255)
                                                                                     tCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCa    >  1:3345325/1‑93 (MQ=255)
                                                                                     tCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCa    <  1:3844716/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT  >  NC_000913/3446316‑3446495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: