Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,500,011 G→A R12Q (CGG→CAG)  b3372 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,500,0110GA100.0% 921.9 / NA 235R12Q (CGG→CAG) b3372hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (126/109);  total (126/109)

Only 100 of 243 total aligned reads displayed.

ATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGC  >  NC_000913/3499921‑3500100
                                                                                          |                                                                                         
  atTAATCCCTCGCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTg                                                                                       <  1:2253475/93‑1 (MQ=255)
   ttAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGc                                                                                      <  2:3798716/93‑1 (MQ=255)
    tAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGcc                                                                                     >  2:5106407/1‑93 (MQ=255)
    tAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGcc                                                                                     <  1:2062873/93‑1 (MQ=255)
     aaTCCCTCTCCCGGCCCGTCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCt                                                                                    <  1:1063488/93‑1 (MQ=255)
       tCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTAt                                                                                  <  1:5001841/93‑1 (MQ=255)
         ccTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTg                                                                                <  2:2044298/93‑1 (MQ=255)
         ccTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTg                                                                                >  1:6464784/1‑93 (MQ=255)
         ccTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTg                                                                                >  1:2707738/1‑93 (MQ=255)
          ctctCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGa                                                                               >  2:45906/1‑93 (MQ=255)
          ctctCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGa                                                                               <  1:5721726/93‑1 (MQ=255)
           tctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGaa                                                                              <  2:3893920/93‑1 (MQ=255)
           tctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGaa                                                                              <  1:2482064/93‑1 (MQ=255)
             tcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAaca                                                                            <  1:5376851/93‑1 (MQ=255)
               ccggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTATACCTGCGGCCACCAGCAGCTGCCTATTGAACACg                                                                          >  1:903319/1‑93 (MQ=255)
                cggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGc                                                                         >  1:1139180/1‑93 (MQ=255)
                cggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGc                                                                         >  1:1543609/1‑93 (MQ=255)
                 ggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCa                                                                        <  2:1842867/93‑1 (MQ=255)
                 ggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCa                                                                        >  2:6168338/1‑93 (MQ=255)
                  gcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGGTGCCTATTGAACAAGcct                                                                       >  1:1934069/1‑91 (MQ=255)
                  gcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAt                                                                       <  2:4132297/93‑1 (MQ=255)
                  gcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAt                                                                       >  1:3392424/1‑93 (MQ=255)
                   cccggcAACGGGCCGGATTTACGCAAGGAGTTATCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAtt                                                                      >  1:3086552/1‑93 (MQ=255)
                   cccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAtt                                                                      <  2:3976174/93‑1 (MQ=255)
                    ccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAatt                                                                     >  1:2462099/1‑93 (MQ=255)
                     cggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTc                                                                    <  1:5762798/93‑1 (MQ=255)
                     cggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTc                                                                    >  1:5547265/1‑93 (MQ=255)
                       gcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGt                                                                  >  2:3578917/1‑93 (MQ=255)
                         aaCGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGa                                                                >  1:3594836/1‑93 (MQ=255)
                          aCGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGAt                                                               <  1:3826144/93‑1 (MQ=255)
                            gggCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGc                                                             >  1:3305759/1‑93 (MQ=255)
                              gCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCaa                                                           <  2:304198/93‑1 (MQ=255)
                              gCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCaa                                                           <  1:1495125/93‑1 (MQ=255)
                              gCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCaa                                                           <  2:4872896/93‑1 (MQ=255)
                                cGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGc                                                         >  2:2904226/1‑93 (MQ=255)
                                cGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGc                                                         >  2:1217734/1‑93 (MQ=255)
                                cGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGc                                                         <  1:4848404/93‑1 (MQ=255)
                                cGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGc                                                         <  2:6371219/93‑1 (MQ=255)
                                 ggATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGGTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCg                                                        >  1:5914683/1‑93 (MQ=255)
                                  gATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGa                                                       <  2:4328807/93‑1 (MQ=255)
                                  gATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGa                                                       >  1:1672744/1‑93 (MQ=255)
                                  gATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGa                                                       >  2:908709/1‑93 (MQ=255)
                                  gATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGa                                                       <  2:1619477/93‑1 (MQ=255)
                                   aTTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAg                                                      >  1:3291073/1‑93 (MQ=255)
                                    tttACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGc                                                     >  1:5141412/1‑93 (MQ=255)
                                    tttACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGc                                                     <  1:4445949/93‑1 (MQ=255)
                                          cAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGtt                                               <  1:2020575/93‑1 (MQ=255)
                                          cAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGtt                                               >  2:1544411/1‑93 (MQ=255)
                                           aaGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTa                                              >  1:2194080/1‑93 (MQ=255)
                                           aaGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTa                                              >  2:5767296/1‑93 (MQ=255)
                                            aGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTac                                             <  2:6152057/93‑1 (MQ=255)
                                            aGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTac                                             <  1:2337338/93‑1 (MQ=255)
                                            aGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTac                                             <  1:2823310/93‑1 (MQ=255)
                                               aGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTacgac                                          <  1:800737/93‑1 (MQ=255)
                                                gTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTacgacg                                         >  2:592288/1‑93 (MQ=255)
                                                  tACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGc                                       >  1:1828638/1‑93 (MQ=255)
                                                   aCCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCa                                      <  2:1510763/93‑1 (MQ=255)
                                                    cccGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCAt                                     <  2:1905244/93‑1 (MQ=255)
                                                      cGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCg                                   >  1:4221363/1‑93 (MQ=255)
                                                      cGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCg                                   >  2:4631312/1‑93 (MQ=255)
                                                        aTGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGaa                                 >  1:837959/1‑93 (MQ=255)
                                                        aTGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGaa                                 >  2:564666/1‑93 (MQ=255)
                                                            aaaCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAttt                             >  2:4021499/1‑93 (MQ=255)
                                                            aaaCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAttt                             >  2:4828386/1‑93 (MQ=255)
                                                            aaaCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAttt                             <  1:4678432/93‑1 (MQ=255)
                                                            aaaCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAttt                             >  1:5080891/1‑93 (MQ=255)
                                                             aaCAGGTATGTTTACCTGCGGCAACGAGCAGCTTCCTATTGAACACGCATTTCGTAATGCAAGCGAGATGGGTTGAGACGGGGTCGAAATTTg                            >  1:6160935/1‑93 (MQ=255)
                                                              aCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAACTTTgg                           >  2:820653/1‑93 (MQ=255)
                                                              aCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTgg                           <  2:2810226/93‑1 (MQ=255)
                                                              aCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTgg                           >  2:2124800/1‑93 (MQ=255)
                                                               cAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTggg                          <  2:5433288/93‑1 (MQ=255)
                                                               cAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTggg                          <  2:106399/93‑1 (MQ=255)
                                                                aGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTgggg                         <  2:5548295/93‑1 (MQ=255)
                                                                aGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTgggg                         >  1:1525273/1‑93 (MQ=255)
                                                                 ggTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGc                        <  2:632652/93‑1 (MQ=255)
                                                                 ggTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGc                        >  2:1386569/1‑93 (MQ=255)
                                                                 ggTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGc                        <  2:2139027/93‑1 (MQ=255)
                                                                  gTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCg                       <  2:3528865/93‑1 (MQ=255)
                                                                     tGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTc                    <  2:5618596/93‑1 (MQ=255)
                                                                     tGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTc                    <  2:5336969/93‑1 (MQ=255)
                                                                       tttACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGc                  <  1:4080503/93‑1 (MQ=255)
                                                                         tcccTGCGACCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGccc                <  1:5466679/91‑1 (MQ=255)
                                                                           ccTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGc              >  2:164872/1‑93 (MQ=255)
                                                                           ccTGCGGCCACCAGCAGCTGCCTATTGAACACACATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGc              >  1:5230599/1‑93 (MQ=255)
                                                                            cTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCa             >  1:6208068/1‑93 (MQ=255)
                                                                             tGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCAc            <  2:1865361/93‑1 (MQ=255)
                                                                              gCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCAcg           <  2:430581/93‑1 (MQ=255)
                                                                               cGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCAcgc          >  2:5702969/1‑93 (MQ=255)
                                                                                ggCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGCCGCCCGCAcgcg         >  1:3735631/1‑93 (MQ=255)
                                                                                 gCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGt        <  2:1224569/93‑1 (MQ=255)
                                                                                 gCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGt        <  1:2953411/93‑1 (MQ=255)
                                                                                 gCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGt        <  1:4501660/93‑1 (MQ=255)
                                                                                 gCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGt        >  2:2569954/1‑93 (MQ=255)
                                                                                 gCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGt        >  2:3691398/1‑93 (MQ=255)
                                                                                   caccaGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTc      >  1:3533729/1‑93 (MQ=255)
                                                                                   caccaGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTc      <  1:160555/93‑1 (MQ=255)
                                                                                   caccaGCAGCTGCCTATTGAACACGCAATTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTc      <  2:3216017/93‑1 (MQ=255)
                                                                                    accaGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTcg     >  2:5755442/1‑93 (MQ=255)
                                                                                     ccaGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTcgc    >  1:5619493/1‑93 (MQ=255)
                                                                                       agcagcTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCgcgc  >  1:2048797/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGC  >  NC_000913/3499921‑3500100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: