Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,519,337 T→C T92A (ACC→GCC)  yrfC ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,519,3370TC99.6% 941.9 / NA 269T92A (ACC→GCC) yrfChypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (124/144);  minor base A (0/1);  total (124/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 274 total aligned reads displayed.

GCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGG  >  NC_000913/3519247‑3519426
                                                                                          |                                                                                         
gCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCaa                                                                                         <  2:724689/93‑1 (MQ=255)
 cGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCaaa                                                                                        <  2:2836662/93‑1 (MQ=255)
 cGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCaaa                                                                                        <  2:3752130/93‑1 (MQ=255)
 cGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCaaa                                                                                        >  1:3268011/1‑93 (MQ=255)
  gTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAAt                                                                                       >  1:776536/1‑93 (MQ=255)
  gTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAAt                                                                                       >  2:265528/1‑93 (MQ=255)
   ttCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAAtt                                                                                      <  1:771243/93‑1 (MQ=255)
     cccTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGt                                                                                    >  2:1381774/1‑93 (MQ=255)
     cccTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGt                                                                                    >  2:1010196/1‑93 (MQ=255)
      ccTGCTGCCAGCTGATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTc                                                                                   <  1:2938775/93‑1 (MQ=255)
       ctgctgCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCg                                                                                  >  1:4155683/1‑93 (MQ=255)
        tgctgcCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGc                                                                                 >  2:4914680/1‑93 (MQ=255)
         gctgcCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCt                                                                                <  2:1716122/93‑1 (MQ=255)
         gctgcCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCt                                                                                <  1:5047809/93‑1 (MQ=255)
          ctgcCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTg                                                                               <  2:4725830/93‑1 (MQ=255)
           tgcCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTgg                                                                              >  2:2039359/1‑93 (MQ=255)
            gcCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGgc                                                                             >  2:1091268/1‑93 (MQ=255)
              cAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGgcgc                                                                           <  2:380865/93‑1 (MQ=255)
              cAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGgcgc                                                                           >  1:5887413/1‑93 (MQ=255)
                gCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTg                                                                         <  2:2877193/93‑1 (MQ=255)
                 cTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGc                                                                        <  1:2585278/93‑1 (MQ=255)
                  ttATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGcc                                                                       <  2:2124735/93‑1 (MQ=255)
                  ttATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGcc                                                                       <  1:3125354/93‑1 (MQ=255)
                  ttATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGcc                                                                       >  1:1542092/1‑93 (MQ=255)
                   tATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCg                                                                      <  1:4356387/93‑1 (MQ=255)
                     tCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGtt                                                                    <  1:5229530/93‑1 (MQ=255)
                       gTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGc                                                                  >  1:6057657/1‑93 (MQ=255)
                         tGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGa                                                                >  1:2132257/1‑93 (MQ=255)
                          gTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTTCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGaa                                                               <  1:5158843/93‑1 (MQ=255)
                          gTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGaa                                                               <  2:5766926/93‑1 (MQ=255)
                           tCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAAc                                                              <  2:4757625/93‑1 (MQ=255)
                            cAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACg                                                             <  2:5027356/93‑1 (MQ=255)
                             aGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGc                                                            <  2:789687/93‑1 (MQ=255)
                             aGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGCCAATTTTCGCTGGCGCTGCCGGTGCGGACACt                                                           >  2:3582033/1‑93 (MQ=255)
                              gCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCt                                                           >  2:4775064/1‑93 (MQ=255)
                              gCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCt                                                           <  2:2229313/93‑1 (MQ=255)
                                cAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGt                                                         <  2:5689909/93‑1 (MQ=255)
                                 aGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGtt                                                        <  1:3384063/93‑1 (MQ=255)
                                  ggCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTc                                                       >  2:344365/1‑93 (MQ=255)
                                  ggCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTc                                                       >  2:4715912/1‑93 (MQ=255)
                                   gCGTGGTCGGGTAAAAGCGCCGCAAGTGCTTCCAGCGCAGATTGCAAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTcg                                                      <  2:5210207/93‑1 (MQ=255)
                                     gTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTcgcg                                                    >  1:3783136/1‑93 (MQ=255)
                                      tGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGt                                                   <  1:5403635/93‑1 (MQ=255)
                                      tGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGt                                                   >  2:1936459/1‑93 (MQ=255)
                                       gCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTa                                                  >  1:4145557/1‑93 (MQ=255)
                                       gCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTa                                                  >  2:2566483/1‑93 (MQ=255)
                                         tCGGGTAAAAGCGCCGCCAGTTCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAAc                                                >  2:5989584/1‑93 (MQ=255)
                                           ggggAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCCGATTGCAGCTGGCGCTGCCGTTGCGAACGCTGGTCGCGTAActg                                              >  1:2654595/1‑93 (MQ=255)
                                           gggTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAActg                                              >  1:3730008/1‑93 (MQ=255)
                                            ggTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAActgc                                             <  2:5927709/93‑1 (MQ=255)
                                             gTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAActgct                                            >  1:2399141/1‑93 (MQ=255)
                                              tAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAActgctg                                           <  1:4265383/93‑1 (MQ=255)
                                               aaaaGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGt                                          >  1:4479144/1‑93 (MQ=255)
                                                aaaGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGtt                                         <  2:3989293/93‑1 (MQ=255)
                                                aaaGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGtt                                         <  2:950038/93‑1 (MQ=255)
                                                aaaGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGtt                                         >  1:3016558/1‑93 (MQ=255)
                                                   gcgcCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCt                                      >  1:4597093/1‑93 (MQ=255)
                                                   gcgcCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCt                                      <  2:3637306/93‑1 (MQ=255)
                                                     gccgccAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTcc                                    <  1:3950732/93‑1 (MQ=255)
                                                     gccgccAGTGCTTCCAGCGCAGATTGCAAGTCGCGGGAAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTcc                                    <  2:4194365/93‑1 (MQ=255)
                                                        gccAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGc                                 >  2:2154001/1‑93 (MQ=255)
                                                         ccAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCa                                <  1:281730/93‑1 (MQ=255)
                                                          cAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCaa                               <  2:1553358/93‑1 (MQ=255)
                                                          cAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCaa                               <  1:1815198/93‑1 (MQ=255)
                                                          cAGTGCTTCCAGCGCAGATTGCAAGGCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCaa                               >  1:2193006/1‑93 (MQ=255)
                                                            gTGCTTCCGGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAAc                             >  1:6324566/1‑93 (MQ=255)
                                                            gTGCTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAAc                             <  1:3549048/93‑1 (MQ=255)
                                                               cTTCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTg                          >  2:6023058/1‑93 (MQ=255)
                                                                 tCCAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGc                        <  1:4227146/93‑1 (MQ=255)
                                                                  ccAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCt                       <  2:6186212/93‑1 (MQ=255)
                                                                  ccAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCt                       <  2:203093/93‑1 (MQ=255)
                                                                   cAGCGCAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCtt                      <  1:102237/93‑1 (MQ=255)
                                                                    agggcAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACTCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTc                     <  1:1222392/90‑1 (MQ=255)
                                                                     gcgcAGATTGCCCGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGGACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGGTTCg                    >  1:4793734/1‑93 (MQ=255)
                                                                     gcgcAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCg                    >  1:5586014/1‑93 (MQ=255)
                                                                     gcgcAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCg                    >  2:4649603/1‑93 (MQ=255)
                                                                      cgcATATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGt                   <  1:1617857/93‑1 (MQ=255)
                                                                       gcAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGtt                  >  1:94277/1‑93 (MQ=255)
                                                                       gcAGATTGCCAGGCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGtt                  <  2:527460/93‑1 (MQ=255)
                                                                        cAGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTa                 <  1:4071683/93‑1 (MQ=255)
                                                                         aGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTAt                <  2:774265/93‑1 (MQ=255)
                                                                         aGATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTAt                <  2:1186848/93‑1 (MQ=255)
                                                                          gATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTGCAGCAAACGTGGCTTCGTTATc               >  2:5471410/1‑93 (MQ=255)
                                                                          gATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATc               >  1:34575/1‑93 (MQ=255)
                                                                          gATTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATc               >  2:4297835/1‑93 (MQ=255)
                                                                           aTTGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCt              <  1:2002270/93‑1 (MQ=255)
                                                                            ttGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTg             <  1:4951285/93‑1 (MQ=255)
                                                                            ttGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTg             <  1:4861823/93‑1 (MQ=255)
                                                                             tGCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGt            <  1:1065907/93‑1 (MQ=255)
                                                                              gCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTa           >  1:6194490/1‑93 (MQ=255)
                                                                              gCCAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTa           <  1:653899/93‑1 (MQ=255)
                                                                                cAGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAg         >  2:1868795/1‑93 (MQ=255)
                                                                                 aGTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGc        <  2:558339/93‑1 (MQ=255)
                                                                                  gTCGCGGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCt       >  2:3893401/1‑93 (MQ=255)
                                                                                     gtgggCAAATTGTCGCTGGCGCTGCCGTTGAGAACGCAGTTCGCGTAACTGCTGTTGGTCTAGCAACCGTGGCTTAGTTATCTGTACTCTGCg    >  2:451662/3‑93 (MQ=255)
                                                                                     gcgGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCg    <  2:2433465/93‑1 (MQ=255)
                                                                                     gcgGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCg    >  1:3623041/1‑93 (MQ=255)
                                                                                     gcgGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCg    <  2:308042/93‑1 (MQ=255)
                                                                                      cgGGCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCgg   <  2:5036434/93‑1 (MQ=255)
                                                                                       gggCAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCggg  <  1:1473772/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGG  >  NC_000913/3519247‑3519426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: