Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,542,788 A→G S107G (AGC→GGC)  yhgH → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,542,7880AG100.0% 825.0 / NA 238S107G (AGC→GGC) yhgHhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (125/113);  total (125/113)

Only 100 of 242 total aligned reads displayed.

TGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG  >  NC_000913/3542698‑3542877
                                                                                          |                                                                                         
tGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGgc                                                                                         >  1:4751120/1‑93 (MQ=255)
  gCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGgcgc                                                                                       <  2:2566773/93‑1 (MQ=255)
   cAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGcc                                                                                      <  2:205107/93‑1 (MQ=255)
    aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc                                                                                     >  2:1245859/1‑93 (MQ=255)
    aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc                                                                                     >  1:4353767/1‑93 (MQ=255)
    aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc                                                                                     <  2:4986607/93‑1 (MQ=255)
    aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc                                                                                     <  2:1531503/93‑1 (MQ=255)
    aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGCCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc                                                                                     >  1:2584315/1‑93 (MQ=255)
     aaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCt                                                                                    >  2:1471903/1‑93 (MQ=255)
      aGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTg                                                                                   >  2:2370634/1‑93 (MQ=255)
       gACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGt                                                                                  >  1:2339623/1‑93 (MQ=255)
       gACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGt                                                                                  <  2:1786046/93‑1 (MQ=255)
             tCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTc                                                                            <  1:5063699/93‑1 (MQ=255)
                cGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCGACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGt                                                                         >  1:2437392/1‑93 (MQ=255)
                cGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGt                                                                         <  2:421982/93‑1 (MQ=255)
                cGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGt                                                                         <  2:2146572/93‑1 (MQ=255)
                 ggTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGtt                                                                        <  2:1588580/93‑1 (MQ=255)
                  gTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTa                                                                       <  2:4108544/93‑1 (MQ=255)
                  gTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTa                                                                       >  1:2859019/1‑93 (MQ=255)
                  gTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTa                                                                       >  1:183546/1‑93 (MQ=255)
                   ttGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTAc                                                                      >  2:5679485/1‑93 (MQ=255)
                     gCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTa                                                                    <  2:5266740/93‑1 (MQ=255)
                      ccGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTAt                                                                   >  2:6001783/1‑93 (MQ=255)
                      ccGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTCTTACTAt                                                                   <  1:5214979/93‑1 (MQ=255)
                        gACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTg                                                                 <  2:2316523/93‑1 (MQ=255)
                            aTGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAg                                                             <  2:5056711/93‑1 (MQ=255)
                             tGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGt                                                            >  2:3068369/1‑93 (MQ=255)
                               cgccgcCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCt                                                          >  1:6060570/1‑93 (MQ=255)
                               cgccgcCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCt                                                          <  1:3257950/93‑1 (MQ=255)
                               cgccgcCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCt                                                          <  2:3815012/93‑1 (MQ=255)
                               cgccgcCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCt                                                          <  1:1704497/93‑1 (MQ=255)
                                 ccgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTa                                                        >  1:5050627/1‑93 (MQ=255)
                                 ccgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTa                                                        <  2:4561167/93‑1 (MQ=255)
                                  cgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCTGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTac                                                       <  2:3337502/93‑1 (MQ=255)
                                  cgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTac                                                       <  1:3720916/93‑1 (MQ=255)
                                  cgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTac                                                       <  2:5329052/93‑1 (MQ=255)
                                   gccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTaca                                                      >  2:2500343/1‑93 (MQ=255)
                                   gccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTaca                                                      <  2:6309706/93‑1 (MQ=255)
                                    ccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTacac                                                     <  2:2862547/93‑1 (MQ=255)
                                    ccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTacac                                                     <  1:2074960/93‑1 (MQ=255)
                                     cgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACg                                                    >  2:4388192/1‑93 (MQ=255)
                                     cgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACg                                                    >  1:410237/1‑93 (MQ=255)
                                      gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc                                                   <  2:2641591/93‑1 (MQ=255)
                                      gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc                                                   >  1:3519253/1‑93 (MQ=255)
                                      gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc                                                   <  2:5773720/93‑1 (MQ=255)
                                      gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc                                                   <  1:4994791/93‑1 (MQ=255)
                                      gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGACACGTCTGTTACTATTGGAAGGCTTACACGc                                                   >  1:1412521/1‑93 (MQ=255)
                                        tAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtc                                                 <  1:6426285/93‑1 (MQ=255)
                                           gTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtcgtc                                              <  1:886384/93‑1 (MQ=255)
                                           gTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtcgtc                                              >  1:2673806/1‑93 (MQ=255)
                                            tCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtcgtcg                                             >  2:738135/1‑93 (MQ=255)
                                              cGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGca                                           >  1:4682401/1‑93 (MQ=255)
                                                cTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacc                                         <  2:5486248/93‑1 (MQ=255)
                                                cTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacc                                         <  2:4723577/93‑1 (MQ=255)
                                                cTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacc                                         <  2:1882806/93‑1 (MQ=255)
                                                 ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacca                                        >  2:692201/1‑93 (MQ=255)
                                                 ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacca                                        >  1:2852671/1‑93 (MQ=255)
                                                 ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacca                                        >  1:2766726/1‑93 (MQ=255)
                                                  tATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcaccac                                       <  2:6424825/93‑1 (MQ=255)
                                                  tATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcaccac                                       <  2:4475513/93‑1 (MQ=255)
                                                  tATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATGGGAAGTCTTACACGCTCGTCGcaccac                                       <  1:5175115/93‑1 (MQ=255)
                                                   aTCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCaccacc                                      >  2:373628/1‑93 (MQ=255)
                                                   aTCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCaccacc                                      >  1:3869962/1‑93 (MQ=255)
                                                    tCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCg                                     <  1:1438803/93‑1 (MQ=255)
                                                    tCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCg                                     >  1:1011402/1‑93 (MQ=255)
                                                     ccaccaGCTTAAATTTTCCCGTCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCgg                                    <  2:4256322/93‑1 (MQ=255)
                                                     ccaccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCgg                                    >  2:2332001/1‑93 (MQ=255)
                                                      caccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCggg                                   >  1:6392615/1‑93 (MQ=255)
                                                       accaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCGCCACCAGGt                                  >  1:6212912/1‑93 (MQ=255)
                                                       accaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGt                                  <  2:2998235/93‑1 (MQ=255)
                                                        ccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGtt                                 <  1:5443452/93‑1 (MQ=255)
                                                        ccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGtt                                 >  1:3398031/1‑93 (MQ=255)
                                                        ccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGtt                                 >  1:1181133/1‑93 (MQ=255)
                                                         caGCTTAAGTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTg                                >  1:6291808/1‑93 (MQ=255)
                                                          aGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGc                               >  1:536586/1‑93 (MQ=255)
                                                          aGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGc                               >  2:3528441/1‑93 (MQ=255)
                                                          aGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGc                               >  2:1032294/1‑93 (MQ=255)
                                                             ttAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAAt                            <  1:2017053/93‑1 (MQ=255)
                                                              tAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAAtt                           >  2:289368/1‑93 (MQ=255)
                                                               aaaTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTg                          <  2:1095543/93‑1 (MQ=255)
                                                                aaTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGc                         <  1:1572364/93‑1 (MQ=255)
                                                                 aTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGcc                        <  1:1108223/93‑1 (MQ=255)
                                                                  ttttCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCg                       >  1:5456459/1‑93 (MQ=255)
                                                                   tttCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCgg                      <  1:3651688/93‑1 (MQ=255)
                                                                     tgccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGAt                    <  2:1434604/91‑1 (MQ=255)
                                                                      cccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATc                   <  2:2418014/93‑1 (MQ=255)
                                                                       ccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCg                  <  2:4246716/93‑1 (MQ=255)
                                                                       ccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCg                  <  1:6012796/93‑1 (MQ=255)
                                                                          gcgcAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCAt               >  2:3884069/1‑93 (MQ=255)
                                                                             cAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGt            <  1:444340/93‑1 (MQ=255)
                                                                              aGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTc           >  2:1338734/1‑93 (MQ=255)
                                                                               gTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCa          <  2:2943358/93‑1 (MQ=255)
                                                                               gTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCa          <  1:4306134/93‑1 (MQ=255)
                                                                                 gAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGc        <  2:3387441/93‑1 (MQ=255)
                                                                                 gAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGc        >  2:1965433/1‑93 (MQ=255)
                                                                                  aaaTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCg       <  1:46205/93‑1 (MQ=255)
                                                                                    aTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGtt     >  2:3617105/1‑93 (MQ=255)
                                                                                    aTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGtt     >  1:4002650/1‑93 (MQ=255)
                                                                                     tCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTc    <  2:755135/93‑1 (MQ=255)
                                                                                      cGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTcc   <  1:735432/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG  >  NC_000913/3542698‑3542877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: