Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,670,236 T→C Y89H (TAT→CAT)  yhjC → putative transcriptional regulator LYSR‑type

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,670,2360TC100.0% 894.8 / NA 253Y89H (TAT→CAT) yhjCputative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (111/142);  total (111/142)

Only 100 of 263 total aligned reads displayed.

CGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTA  >  NC_000913/3670146‑3670325
                                                                                          |                                                                                         
cgcCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcat                                                                                         <  2:2405603/93‑1 (MQ=255)
  ccAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcatta                                                                                       >  2:2888370/1‑93 (MQ=255)
  ccAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcatta                                                                                       >  1:1426744/1‑93 (MQ=255)
     gATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCa                                                                                    >  1:101901/1‑93 (MQ=255)
      aTACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCaa                                                                                   >  2:3696208/1‑93 (MQ=255)
         cAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGa                                                                                <  1:234205/93‑1 (MQ=255)
          aGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAg                                                                               <  1:6215792/93‑1 (MQ=255)
           ggCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGc                                                                              >  1:1722012/1‑93 (MQ=255)
           ggCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGc                                                                              >  2:4048479/1‑93 (MQ=255)
           ggCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGc                                                                              <  1:5372604/93‑1 (MQ=255)
           ggCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAAAGAGc                                                                              >  1:4466707/1‑93 (MQ=255)
           ggCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACACATTATCAACGAGc                                                                              >  2:5182867/1‑93 (MQ=255)
            gCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCa                                                                             <  1:5853102/93‑1 (MQ=255)
            gCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCa                                                                             >  1:4663084/1‑93 (MQ=255)
            gCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCa                                                                             <  2:3604890/93‑1 (MQ=255)
            gCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCa                                                                             <  1:2704211/93‑1 (MQ=255)
                  gAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAt                                                                       <  1:5532585/93‑1 (MQ=255)
                  gAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAt                                                                       >  2:3749168/1‑93 (MQ=255)
                  gAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAt                                                                       <  1:401396/93‑1 (MQ=255)
                   aaCATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAtg                                                                      <  2:4655684/93‑1 (MQ=255)
                   aaCATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAtg                                                                      <  1:3761086/93‑1 (MQ=255)
                   aaCATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAtg                                                                      >  2:6407360/1‑93 (MQ=255)
                    aCATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCTACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAtgt                                                                     <  2:2754840/93‑1 (MQ=255)
                    aCATCAACTTGCCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCGGAAGGCATGCCCCATTATCAACGAGCAAAAGAtgt                                                                     <  1:3317654/93‑1 (MQ=255)
                     cATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAtgtg                                                                    >  1:1313093/1‑93 (MQ=255)
                      aTCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATgtgt                                                                   <  1:613514/93‑1 (MQ=255)
                      aTCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATgtgt                                                                   <  2:168026/93‑1 (MQ=255)
                      aTCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATgtgt                                                                   <  2:2100297/93‑1 (MQ=255)
                      aTCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATgtgt                                                                   <  2:2026504/93‑1 (MQ=255)
                       tCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGtt                                                                  <  1:694026/93‑1 (MQ=255)
                       tCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGtt                                                                  <  2:4443897/93‑1 (MQ=255)
                       tCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGtt                                                                  <  2:4902604/93‑1 (MQ=255)
                       tCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGtt                                                                  >  2:5144470/1‑93 (MQ=255)
                        cAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTg                                                                 >  1:4924344/1‑93 (MQ=255)
                         aaCTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGa                                                                <  1:4129364/93‑1 (MQ=255)
                          aCTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAg                                                               >  1:3210053/1‑93 (MQ=255)
                             tGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTaa                                                            >  1:1377003/1‑93 (MQ=255)
                              ggCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAAt                                                           >  1:840998/1‑93 (MQ=255)
                               gCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAAtc                                                          >  2:4259589/1‑93 (MQ=255)
                                cACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAAtct                                                         <  2:1138220/93‑1 (MQ=255)
                                 aCCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAAtctc                                                        >  1:3909363/1‑93 (MQ=255)
                                  cccAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCa                                                       <  2:2815213/93‑1 (MQ=255)
                                  cccAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCa                                                       <  2:6341677/93‑1 (MQ=255)
                                   ccAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAg                                                      <  2:5522167/93‑1 (MQ=255)
                                    cAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGc                                                     >  2:4822918/1‑93 (MQ=255)
                                     aGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCg                                                    <  2:4190178/93‑1 (MQ=255)
                                     aGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCg                                                    >  2:2222898/1‑93 (MQ=255)
                                        ttCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAAc                                                 <  1:2945477/93‑1 (MQ=255)
                                         tctcCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACt                                                <  1:758367/93‑1 (MQ=255)
                                          ctcCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTg                                               <  2:229784/93‑1 (MQ=255)
                                           tcCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTgg                                              >  1:1817461/1‑93 (MQ=255)
                                           tcCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTgg                                              <  2:6134376/93‑1 (MQ=255)
                                            ccAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGa                                             <  1:6440988/93‑1 (MQ=255)
                                            ccAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGa                                             <  1:2734776/93‑1 (MQ=255)
                                             cAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGAc                                            <  1:114600/93‑1 (MQ=255)
                                              aGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACg                                           >  2:262568/1‑93 (MQ=255)
                                               gcgcACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACgg                                          <  2:2174079/93‑1 (MQ=255)
                                                cgcACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGt                                         <  2:1610057/93‑1 (MQ=255)
                                                cgcACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGt                                         <  2:5090178/93‑1 (MQ=255)
                                                 gcACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTc                                        <  2:3147325/93‑1 (MQ=255)
                                                 gcACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTc                                        <  1:528100/93‑1 (MQ=255)
                                                  caccacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCt                                       <  2:4064150/93‑1 (MQ=255)
                                                  caccacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCt                                       <  1:4872659/93‑1 (MQ=255)
                                                    ccacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGt                                     <  1:3722997/93‑1 (MQ=255)
                                                    ccacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGt                                     <  2:2694747/93‑1 (MQ=255)
                                                    ccacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGt                                     <  2:306865/93‑1 (MQ=255)
                                                     cacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGtt                                    <  2:1021344/93‑1 (MQ=255)
                                                      acGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGttt                                   <  1:5409007/93‑1 (MQ=255)
                                                          gACGGGTCAAACTCACGCCGGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTTNTTANAc                               >  2:1371260/1‑93 (MQ=255)
                                                          gACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAAc                               <  1:5098824/93‑1 (MQ=255)
                                                          gACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAAc                               >  2:329935/1‑93 (MQ=255)
                                                            cGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAg                             >  1:4816653/1‑93 (MQ=255)
                                                              ggTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGa                           <  1:3479639/93‑1 (MQ=255)
                                                              ggTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGa                           <  1:5508920/93‑1 (MQ=255)
                                                               gTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGAt                          >  1:4367629/1‑93 (MQ=255)
                                                                tCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATg                         <  1:3598757/93‑1 (MQ=255)
                                                                 cAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGc                        >  1:2969926/1‑93 (MQ=255)
                                                                 cAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGc                        <  1:3113691/93‑1 (MQ=255)
                                                                 cAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGc                        <  2:5925276/93‑1 (MQ=255)
                                                                  aaaCTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGcc                       <  2:3350007/93‑1 (MQ=255)
                                                                  aaaCTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGcc                       >  1:4547526/1‑93 (MQ=255)
                                                                    aCTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGccac                     <  2:412524/93‑1 (MQ=255)
                                                                        aCGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGt                 <  2:1883473/93‑1 (MQ=255)
                                                                        aCGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGt                 >  1:3997841/1‑93 (MQ=255)
                                                                        aCGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGt                 >  2:1445779/1‑93 (MQ=255)
                                                                         cGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTa                <  1:2870994/93‑1 (MQ=255)
                                                                              gAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGTGCTGTTTCAACAGGATGCCACCAGTATGAGc           >  1:2247781/1‑93 (MQ=255)
                                                                              gAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGc           <  2:3937630/93‑1 (MQ=255)
                                                                              gAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGc           <  1:4781625/93‑1 (MQ=255)
                                                                               aaGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCg          >  1:4214981/1‑93 (MQ=255)
                                                                               aaGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCg          >  2:5418044/1‑93 (MQ=255)
                                                                                aGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCgg         >  1:2633881/1‑93 (MQ=255)
                                                                                  gCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTa       <  1:5655042/93‑1 (MQ=255)
                                                                                   cATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTaa      <  2:6418986/93‑1 (MQ=255)
                                                                                     tGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAt    >  2:1500816/1‑93 (MQ=255)
                                                                                     tGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAt    >  2:5680830/1‑93 (MQ=255)
                                                                                     tGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAt    >  1:5917185/1‑93 (MQ=255)
                                                                                     tGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAt    <  2:833009/93‑1 (MQ=255)
                                                                                      gACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAtt   <  1:1971984/93‑1 (MQ=255)
                                                                                       aCCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTa  <  2:452192/93‑1 (MQ=255)
                                                                                          |                                                                                         
CGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTA  >  NC_000913/3670146‑3670325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: