Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,692,572 C→T T98T (ACG→ACA b3533 ← putative cellulose synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,692,5720CT99.6% 856.1 / NA 227T98T (ACG→ACAb3533putative cellulose synthase
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (104/122);  total (105/122)
Fisher's exact test for biased strand distribution p-value = 4.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 232 total aligned reads displayed.

GCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGTTGAT  >  NC_000913/3692482‑3692661
                                                                                          |                                                                                         
 cTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGtt                                                                                        >  2:181022/1‑93 (MQ=255)
   aaCGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTc                                                                                      <  1:2083374/93‑1 (MQ=255)
   aaCGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTc                                                                                      >  1:65123/1‑93 (MQ=255)
    aCGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCt                                                                                     >  2:6354533/1‑93 (MQ=255)
      gcgcTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCttt                                                                                   <  2:878636/93‑1 (MQ=255)
      gcgcTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCttt                                                                                   <  2:2292312/93‑1 (MQ=255)
      gcgcTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCttt                                                                                   <  2:68208/93‑1 (MQ=255)
             ggCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGAt                                                                            >  2:3798264/1‑93 (MQ=255)
             ggCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGAt                                                                            >  1:3204104/1‑93 (MQ=255)
              gCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATg                                                                           >  1:1011653/1‑93 (MQ=255)
                aGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGCTGcc                                                                         >  2:2227241/1‑92 (MQ=255)
                 gCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCAc                                                                        >  2:2851709/1‑93 (MQ=255)
                 gCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCAc                                                                        <  1:3528656/93‑1 (MQ=255)
                  cTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCAcc                                                                       <  1:4638072/93‑1 (MQ=255)
                  cTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCAcc                                                                       <  1:3103181/93‑1 (MQ=255)
                   tCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCg                                                                      <  1:3600223/93‑1 (MQ=255)
                     gTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGAt                                                                    >  2:4006860/1‑93 (MQ=255)
                      ttCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATc                                                                   <  1:5850820/93‑1 (MQ=255)
                       tCATCCATTTATGGTAACGTCCACGAATATTTAGCAGTCCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCa                                                                  <  1:3307925/93‑1 (MQ=255)
                        cATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCaa                                                                 >  1:3886977/1‑93 (MQ=255)
                         aTCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAAt                                                                >  2:2064089/1‑93 (MQ=255)
                         aTCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAAt                                                                <  1:5192947/93‑1 (MQ=255)
                            cATTGATGGTACCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAAc                                                             <  2:1128420/93‑1 (MQ=255)
                               tGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAg                                                          >  2:3579328/1‑93 (MQ=255)
                                 aTGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCa                                                        <  2:1502119/93‑1 (MQ=255)
                                  tGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCAt                                                       >  2:4126535/1‑93 (MQ=255)
                                   ggTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATg                                                      >  1:4365490/1‑93 (MQ=255)
                                   ggTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATg                                                      >  1:5103540/1‑93 (MQ=255)
                                      aaCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGttt                                                   >  1:2739135/1‑93 (MQ=255)
                                      aaCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGttt                                                   <  2:3739690/93‑1 (MQ=255)
                                      aaCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGttt                                                   >  2:5459189/1‑93 (MQ=255)
                                      aaCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGttt                                                   >  2:3511666/1‑93 (MQ=255)
                                       aCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTg                                                  >  1:4352549/1‑93 (MQ=255)
                                       aCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTg                                                  <  1:145887/93‑1 (MQ=255)
                                       aCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTg                                                  <  1:3818241/93‑1 (MQ=255)
                                          tCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAAt                                               <  1:1816453/93‑1 (MQ=255)
                                           ccACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATg                                              >  1:4915635/1‑93 (MQ=255)
                                           ccACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATg                                              >  1:2158937/1‑93 (MQ=255)
                                            cACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATga                                             <  1:2438546/93‑1 (MQ=255)
                                            cACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATga                                             <  2:2163042/93‑1 (MQ=255)
                                            cACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATga                                             >  1:481149/1‑93 (MQ=255)
                                             aCGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATgag                                            >  2:4983452/1‑93 (MQ=255)
                                             aCGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATgag                                            <  1:88575/93‑1 (MQ=255)
                                             aCGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATgag                                            <  2:4808187/93‑1 (MQ=255)
                                              cGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATgaga                                           >  1:5510485/1‑93 (MQ=255)
                                              cGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATgaga                                           <  2:626494/93‑1 (MQ=255)
                                              cGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATgaga                                           <  1:187954/93‑1 (MQ=255)
                                              cGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATgaga                                           <  1:4442145/93‑1 (MQ=255)
                                                 atatTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATaa                                        <  2:5033117/93‑1 (MQ=255)
                                                 atatTGTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATaa                                        <  1:1370198/93‑1 (MQ=255)
                                                   atTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACg                                      >  2:1009377/1‑93 (MQ=255)
                                                   atTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACg                                      >  2:773818/1‑93 (MQ=255)
                                                   atTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACg                                      <  1:5391201/93‑1 (MQ=255)
                                                      ttGCAGACCTGAAAATGCCCGCCTGCGCGGTGTCGGTGTTTCTTTGCGCGATGCACCGATCAATAGCCAGCATGTTTGAATGAGATAACGGAc                                   <  2:6149288/93‑1 (MQ=255)
                                                          aGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCggg                               >  1:3683464/1‑93 (MQ=255)
                                                          aGACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCggg                               >  1:4001836/1‑93 (MQ=255)
                                                           gACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGt                              <  1:1551731/93‑1 (MQ=255)
                                                           gACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGt                              >  2:1536222/1‑93 (MQ=255)
                                                           gACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGt                              >  1:6328707/1‑93 (MQ=255)
                                                           gACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGt                              >  2:455106/1‑93 (MQ=255)
                                                           gACCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGt                              >  2:4190134/1‑93 (MQ=255)
                                                            aCCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTc                             <  2:4676727/93‑1 (MQ=255)
                                                            aCCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTc                             <  1:5917594/93‑1 (MQ=255)
                                                            aCCTGAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTc                             >  2:3141617/1‑93 (MQ=255)
                                                                gAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgc                         >  2:4326357/1‑93 (MQ=255)
                                                                gAAAATGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgc                         <  2:2747391/93‑1 (MQ=255)
                                                                 aaaaTGCCAGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcg                        >  1:6304812/1‑93 (MQ=255)
                                                                   aaTGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcgga                      >  2:6458791/1‑93 (MQ=255)
                                                                    aTGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggac                     <  2:500265/93‑1 (MQ=255)
                                                                    aTGCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggac                     <  2:1228065/93‑1 (MQ=255)
                                                                      gCCCGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggacgc                   <  2:5215677/93‑1 (MQ=255)
                                                                       cccGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggacgcg                  >  2:19769/1‑93 (MQ=255)
                                                                        ccGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggacgcgg                 >  1:5434157/1‑93 (MQ=255)
                                                                         cGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggacgcgga                <  1:2580966/93‑1 (MQ=255)
                                                                         cGCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggacgcgga                >  1:4869147/1‑93 (MQ=255)
                                                                          gCCTGCGGGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggacgcggac               >  1:6131269/1‑93 (MQ=255)
                                                                          gCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggacgcggac               >  2:5576502/1‑93 (MQ=255)
                                                                          gCCTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAgcggacgcggac               <  2:3004276/93‑1 (MQ=255)
                                                                           ccTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGcggacgcggacg              >  2:1860063/1‑93 (MQ=255)
                                                                           ccTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGcggacgcggacg              <  2:5416855/93‑1 (MQ=255)
                                                                           ccTGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGcggacgcggacg              >  1:1997180/1‑93 (MQ=255)
                                                                             tGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGgacgcggacgcg            >  1:2645917/1‑93 (MQ=255)
                                                                             tGCGCGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGgacgcggacgcg            >  1:1244879/1‑93 (MQ=255)
                                                                              gcgcGGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGa           <  1:4250299/93‑1 (MQ=255)
                                                                               cgcgGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAg          <  2:3452809/93‑1 (MQ=255)
                                                                               cgcgGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAg          <  2:5684943/93‑1 (MQ=255)
                                                                               cgcgGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAg          <  1:2824279/93‑1 (MQ=255)
                                                                                gcgGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAgg         <  2:584400/93‑1 (MQ=255)
                                                                                 cgGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGc        <  2:3695201/93‑1 (MQ=255)
                                                                                 cgGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGc        <  1:1392279/93‑1 (MQ=255)
                                                                                 cgGTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGc        <  2:65123/93‑1 (MQ=255)
                                                                                  ggTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCg       >  1:6436565/1‑93 (MQ=255)
                                                                                   gTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGt      <  2:5164802/93‑1 (MQ=255)
                                                                                   gTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGt      >  1:596049/1‑93 (MQ=255)
                                                                                   gTTTCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGt      <  2:2523689/93‑1 (MQ=255)
                                                                                    tttCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGtt     <  1:3473979/93‑1 (MQ=255)
                                                                                    tttCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGtt     <  1:1719912/93‑1 (MQ=255)
                                                                                    tttCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGtt     >  2:1399378/1‑93 (MQ=255)
                                                                                     ttCGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGTTg    <  2:3252678/93‑1 (MQ=255)
                                                                                       cGGTGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGTTGat  <  1:2219945/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCAATAACCAGCATGTTTGAATGAGATAACGGACCGGGTCCAGCGGACGCGGACGCGAGGCGTTGAT  >  NC_000913/3692482‑3692661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: