Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 400,205 A→G intergenic (‑58/‑405) ddlA ← / → yaiB D‑alanine‑D‑alanine ligase A/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913400,2050AG100.0% 523.7 / NA 153intergenic (‑58/‑405)ddlA/yaiBD‑alanine‑D‑alanine ligase A/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (28/125);  total (28/125)

Only 100 of 157 total aligned reads displayed.

ACCAAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGATTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGC  >  NC_000913/400115‑400294
                                                                                          |                                                                                         
accaAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGtt                                                                                         <  2:5530497/93‑1 (MQ=255)
 ccaAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTc                                                                                        <  1:4211616/93‑1 (MQ=255)
  caAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcg                                                                                       <  2:1222648/93‑1 (MQ=255)
   aaaaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcgc                                                                                      <  1:6009805/93‑1 (MQ=255)
   aaaaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcgc                                                                                      <  1:4217814/93‑1 (MQ=255)
   aaaaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcgc                                                                                      <  2:5541924/93‑1 (MQ=255)
    aaaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcgcg                                                                                     >  2:1620202/1‑93 (MQ=255)
    aaaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcgcg                                                                                     >  2:2856133/1‑93 (MQ=255)
    aaaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcgcg                                                                                     <  1:1695130/93‑1 (MQ=255)
     aaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCgg                                                                                    >  1:3518628/1‑93 (MQ=255)
      aaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGc                                                                                   <  1:264396/93‑1 (MQ=255)
       aCGATTCCTGCCCTCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGcc                                                                                  <  2:1781304/93‑1 (MQ=255)
       aCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGcc                                                                                  <  2:5515649/93‑1 (MQ=255)
       aCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGcc                                                                                  <  1:386137/93‑1 (MQ=255)
       aCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGcc                                                                                  <  1:1062355/93‑1 (MQ=255)
          aTTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTc                                                                               >  2:3632018/1‑93 (MQ=255)
          aTTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTc                                                                               <  2:3868290/93‑1 (MQ=255)
          aTTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGGTCGCGGCCTTc                                                                               >  2:4450924/1‑93 (MQ=255)
           ttCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCt                                                                              <  2:1698935/93‑1 (MQ=255)
           ttCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCt                                                                              <  1:3215268/93‑1 (MQ=255)
            tCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTg                                                                             <  2:6415000/93‑1 (MQ=255)
                aCCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAg                                                                         >  2:144219/1‑93 (MQ=255)
                     cAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAttgt                                                                    <  2:4340312/93‑1 (MQ=255)
                      aGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAttgtt                                                                   <  2:5349856/93‑1 (MQ=255)
                       gTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAttgttg                                                                  >  1:5209204/1‑93 (MQ=255)
                            tCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtc                                                             <  1:1414192/93‑1 (MQ=255)
                            tCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtc                                                             <  1:1436965/93‑1 (MQ=255)
                             ccATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtct                                                            >  2:4940363/1‑93 (MQ=255)
                             ccATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtct                                                            <  2:5993836/93‑1 (MQ=255)
                             ccATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtct                                                            <  1:2410188/93‑1 (MQ=255)
                             ccATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtct                                                            <  2:6293948/93‑1 (MQ=255)
                               aTCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtcttc                                                          <  1:3595368/93‑1 (MQ=255)
                               aTCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtcttc                                                          <  1:6096043/93‑1 (MQ=255)
                                acTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtcttct                                                         <  2:5214976/92‑1 (MQ=255)
                                 cTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctg                                                        <  1:555923/93‑1 (MQ=255)
                                 cTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctg                                                        >  2:5056567/1‑93 (MQ=255)
                                  ttAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctgc                                                       <  2:3770/93‑1 (MQ=255)
                                  ttAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctgc                                                       <  2:587742/93‑1 (MQ=255)
                                   tAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctgct                                                      <  1:3017447/93‑1 (MQ=255)
                                   tAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctgct                                                      <  1:1215452/93‑1 (MQ=255)
                                      aaaCCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGAc                                                   <  2:3362804/93‑1 (MQ=255)
                                          ctgtCCCGTCTAACACAAAGTGCATACATTGCCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAg                                               <  2:248340/90‑1 (MQ=255)
                                          cTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAg                                               <  1:63423/93‑1 (MQ=255)
                                           tATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGc                                              <  2:5711720/93‑1 (MQ=255)
                                           tATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGc                                              <  1:2779411/93‑1 (MQ=255)
                                           tATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGc                                              <  2:2731066/93‑1 (MQ=255)
                                            aTCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCg                                             >  2:5927203/1‑93 (MQ=255)
                                              cccGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTg                                           <  1:3741495/93‑1 (MQ=255)
                                               ccGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGc                                          <  1:639569/93‑1 (MQ=255)
                                                cGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCa                                         <  2:3988513/93‑1 (MQ=255)
                                                 gTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCaa                                        <  1:1598561/93‑1 (MQ=255)
                                                  tCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAAc                                       <  2:3387495/93‑1 (MQ=255)
                                                  tCTAACACAAAGTGAATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAAc                                       <  1:3737180/93‑1 (MQ=255)
                                                   cTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACg                                      <  2:5355656/93‑1 (MQ=255)
                                                    tAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGt                                     >  1:936164/1‑93 (MQ=255)
                                                      acacAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTAc                                   >  1:2076010/1‑93 (MQ=255)
                                                       cacaAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACt                                  <  1:1068811/93‑1 (MQ=255)
                                                        acaAAGTGCATACATTACCACGACAAAGCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTg                                 <  1:3376259/93‑1 (MQ=255)
                                                        acaAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTg                                 <  1:5847225/93‑1 (MQ=255)
                                                         caAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTgg                                >  2:4570452/1‑93 (MQ=255)
                                                          aaaGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGt                               <  1:2789475/93‑1 (MQ=255)
                                                          aaaGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGt                               <  2:389373/93‑1 (MQ=255)
                                                           aaGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTg                              <  1:4459421/93‑1 (MQ=255)
                                                           aaGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTg                              <  2:4857786/93‑1 (MQ=255)
                                                            aGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTga                             <  2:561069/93‑1 (MQ=255)
                                                             gTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTgaa                            <  1:4802108/93‑1 (MQ=255)
                                                              tGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTgaag                           <  1:5928976/93‑1 (MQ=255)
                                                              tGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTgaag                           <  1:5711345/93‑1 (MQ=255)
                                                               gCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTgaaga                          <  2:5972591/93‑1 (MQ=255)
                                                                   aCATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGt                      <  1:701208/93‑1 (MQ=255)
                                                                   aCATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGt                      <  2:1028110/93‑1 (MQ=255)
                                                                   aCATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGt                      <  1:5414099/93‑1 (MQ=255)
                                                                    cATTACCACGGCAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTg                     <  2:6275517/93‑1 (MQ=255)
                                                                    cATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTg                     <  1:136122/93‑1 (MQ=255)
                                                                     aTTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGc                    <  1:524115/93‑1 (MQ=255)
                                                                     aTTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGc                    <  2:1668421/93‑1 (MQ=255)
                                                                      ttACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCg                   <  2:4430558/93‑1 (MQ=255)
                                                                       tcccACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGt                  <  2:3023433/91‑1 (MQ=255)
                                                                       tACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGt                  <  2:772278/93‑1 (MQ=255)
                                                                        aCCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGtt                 <  2:1994692/93‑1 (MQ=255)
                                                                         ccACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAGAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTa                <  1:3930432/93‑1 (MQ=255)
                                                                         ccACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTa                <  2:4960388/93‑1 (MQ=255)
                                                                          cACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAt               <  1:4141334/93‑1 (MQ=255)
                                                                           aCGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAtc              <  2:1502808/93‑1 (MQ=255)
                                                                           aCGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAtc              <  2:5789947/93‑1 (MQ=255)
                                                                           aCGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAtc              <  1:6158745/93‑1 (MQ=255)
                                                                            cGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAtct             <  2:2691450/93‑1 (MQ=255)
                                                                            cGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAtct             <  1:6053451/93‑1 (MQ=255)
                                                                            cGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAtct             <  2:5886624/93‑1 (MQ=255)
                                                                             gACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGAGTTAtctc            <  1:6283773/93‑1 (MQ=255)
                                                                              aCAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCa           <  1:5918756/93‑1 (MQ=255)
                                                                                  aaCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGa       <  1:3804398/93‑1 (MQ=255)
                                                                                   aCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGAt      <  1:5633369/93‑1 (MQ=255)
                                                                                    cGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGAtg     <  2:2826548/93‑1 (MQ=255)
                                                                                    cGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGAtg     <  2:6426578/93‑1 (MQ=255)
                                                                                     ggggggTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGAtgt    <  1:998600/93‑1 (MQ=255)
                                                                                      ggggGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGAtgtg   <  2:2214238/93‑1 (MQ=255)
                                                                                       ggggTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTgc  <  2:5808663/93‑1 (MQ=255)
                                                                                       ggggTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTgc  <  1:4085216/93‑1 (MQ=255)
                                                                                       ggggTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTgc  <  1:4397748/93‑1 (MQ=255)
                                                                                          |                                                                                         
ACCAAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGATTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGC  >  NC_000913/400115‑400294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: