BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,882,952	T→C	L83P (CTG→CCG)	yidC →	60 KD inner‑membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,882,952	0	T	C	100.0%	895.6 / NA	257	L83P (CTG→CCG)	yidC	60 KD inner‑membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (117/140); total (117/140)

Only 100 of 275 total aligned reads displayed.

CGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCTGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCG  >  NC_000913/3882862‑3883041

 ggCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTccgct                                                                                        >  1:1793696/1‑93 (MQ=255)

  gCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTccgctg                                                                                       >  1:5028068/1‑93 (MQ=255)

  gCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTccgctg                                                                                       >  1:6160705/1‑93 (MQ=255)

   ccAGAGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCcgctgc                                                                                      >  2:1522532/1‑93 (MQ=255)

     aGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGcttcct                                                                                    <  1:158597/93‑1 (MQ=255)

       tGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGctgcctgc                                                                                  <  2:3973777/93‑1 (MQ=255)

        ggCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCt                                                                                 <  1:1081058/93‑1 (MQ=255)

        ggCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCt                                                                                 <  2:195774/93‑1 (MQ=255)

        ggCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCt                                                                                 <  1:2754049/93‑1 (MQ=255)

         gcaaGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCtt                                                                                <  1:2231266/90‑1 (MQ=255)

          ccAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTa                                                                               >  2:4299926/1‑93 (MQ=255)

           cAGGGTAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTAc                                                                              <  1:3656370/93‑1 (MQ=255)

            aGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTAcc                                                                             >  1:565026/1‑93 (MQ=255)

             ggggAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTAccc                                                                            >  2:2440145/1‑93 (MQ=255)

             ggggAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTAccc                                                                            >  1:5723926/1‑93 (MQ=255)

             ggggAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTAccc                                                                            >  2:1312952/1‑93 (MQ=255)

                gAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGaa                                                                         >  2:4502958/1‑93 (MQ=255)

                gAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGaa                                                                         <  1:1854283/93‑1 (MQ=255)

                gAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGaa                                                                         <  2:5729634/93‑1 (MQ=255)

                  aaCTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAag                                                                       >  2:2894141/1‑93 (MQ=255)

                     tGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGc                                                                    <  2:4190221/93‑1 (MQ=255)

                       aTCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTg                                                                  >  1:1880799/1‑93 (MQ=255)

                        tctcGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGa                                                                 <  2:4796656/93‑1 (MQ=255)

                          tcGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAAc                                                               <  2:4402103/93‑1 (MQ=255)

                            ggTTAAGACCGACGTGCTTGATCTGACCATCAACGCCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAActc                                                             <  2:836606/93‑1 (MQ=255)

                             gTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAActct                                                            <  2:3063198/93‑1 (MQ=255)

                              ttAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTa                                                           <  2:5244708/93‑1 (MQ=255)

                               tAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTAc                                                          <  2:3252959/93‑1 (MQ=255)

                                aaGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTAcc                                                         <  1:446727/93‑1 (MQ=255)

                                 aGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTAccc                                                        <  1:4004445/93‑1 (MQ=255)

                                 aGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTAccc                                                        <  1:4583060/93‑1 (MQ=255)

                                  gACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCa                                                       >  2:483462/1‑93 (MQ=255)

                                  gACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCa                                                       >  2:4859377/1‑93 (MQ=255)

                                  gACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCa                                                       >  1:519766/1‑93 (MQ=255)

                                   aCCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAg                                                      <  1:4192483/93‑1 (MQ=255)

                                    ccGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGc                                                     <  2:5083852/93‑1 (MQ=255)

                                    ccGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGc                                                     <  1:3426606/93‑1 (MQ=255)

                                       aCGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGt                                                  <  1:805737/93‑1 (MQ=255)

                                       aCGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGt                                                  >  2:4731933/1‑93 (MQ=255)

                                       aCGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGt                                                  <  1:4136179/93‑1 (MQ=255)

                                        cGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGtt                                                 >  2:2860487/1‑93 (MQ=255)

                                         gTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTc                                                >  1:5946917/1‑93 (MQ=255)

                                          tGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTcc                                               >  2:3303556/1‑93 (MQ=255)

                                          tGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTcc                                               >  1:768994/1‑93 (MQ=255)

                                           ccTTGATCTGCCCATCAACACCTGTGGTGGTGTTGTTGAGCAAGCTCCGCTGCCTGCTGACCCGAAAGAGCCGAACTCTACCCAGCCGTTCCa                                              <  1:1632134/92‑1 (MQ=255)

                                            cTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAg                                             >  2:3766072/1‑93 (MQ=255)

                                             ttGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGc                                            <  2:1925800/93‑1 (MQ=255)

                                             ttGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGc                                            <  2:6240052/93‑1 (MQ=255)

                                             ttGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGc                                            >  1:6069646/1‑93 (MQ=255)

                                             ttGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGc                                            >  2:1047732/1‑93 (MQ=255)

                                              tGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCt                                           <  2:5562262/93‑1 (MQ=255)

                                               gATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTg                                          <  2:175303/93‑1 (MQ=255)

                                                aTCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGt                                         <  1:2835002/93‑1 (MQ=255)

                                                   tGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTgg                                      <  2:4435070/93‑1 (MQ=255)

                                                   tGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTgg                                      <  2:2496572/93‑1 (MQ=255)

                                                    gcccATCAACACCAGTGGTGGTGATGTGGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGa                                     <  1:953740/91‑1 (MQ=255)

                                                    gACCATCAACGCCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGa                                     <  2:3559508/93‑1 (MQ=255)

                                                    gACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGa                                     >  1:1710050/1‑93 (MQ=255)

                                                      ccATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGaaa                                   >  1:3204612/1‑93 (MQ=255)

                                                      ccATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGaaa                                   >  1:6373960/1‑93 (MQ=255)

                                                       cATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAAc                                  >  2:5834420/1‑93 (MQ=255)

                                                        aTCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACt                                 >  1:2606713/1‑93 (MQ=255)

                                                         tCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACtt                                >  1:86147/1‑93 (MQ=255)

                                                         tCAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACtt                                >  1:4705173/1‑93 (MQ=255)

                                                          cAACACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTc                               <  2:2847823/93‑1 (MQ=255)

                                                           aaCACCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCa                              >  2:5439584/1‑93 (MQ=255)

                                                            acacCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCAc                             >  1:37687/1‑93 (MQ=255)

                                                            acacCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCCGAACTCTACCCAGCCGTTCCAGCTGTTGGAAAGTTCAc                             <  1:1394427/93‑1 (MQ=255)

                                                             cacCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCAcc                            <  2:3520847/93‑1 (MQ=255)

                                                             cacCCGTGGTGGTGATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCAcc                            <  2:697750/93‑1 (MQ=255)

                                                                  gtggtggtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGt                       >  2:391321/1‑93 (MQ=255)

                                                                  gtggtggtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGt                       <  1:2986050/93‑1 (MQ=255)

                                                                    ggtggtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGttt                     <  2:5896903/93‑1 (MQ=255)

                                                                     gtggttATGTTGAGAAAGCTCCGCGGCCTCCTTACCCGAAAGAGCTGAACTATACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGttta                    <  2:3647335/93‑1 (MQ=255)

                                                                     gtggtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGttta                    <  1:5284915/93‑1 (MQ=255)

                                                                      tgttgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttat                   <  1:82059/90‑1 (MQ=255)

                                                                      tggtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttat                   <  2:1257027/93‑1 (MQ=255)

                                                                      tggtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttat                   >  2:1938139/1‑93 (MQ=255)

                                                                      tggtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttat                   <  2:1155004/93‑1 (MQ=255)

                                                                       ggtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttatt                  >  2:309147/1‑93 (MQ=255)

                                                                        gtgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttattt                 <  1:3561963/93‑1 (MQ=255)

                                                                         tgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttattta                <  2:1637407/93‑1 (MQ=255)

                                                                         tgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttattta                <  1:4753594/93‑1 (MQ=255)

                                                                         tgATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGtttattta                <  1:5982174/93‑1 (MQ=255)

                                                                          gATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTttatttat               >  1:1280209/1‑93 (MQ=255)

                                                                          gATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTttatttat               <  2:6026509/93‑1 (MQ=255)

                                                                          gATGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTttatttat               >  1:2773014/1‑93 (MQ=255)

                                                                           aTGTTGAGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCAcc                            <  1:696388/79‑1 (MQ=255)

                                                                            tGTTGAGCAACCTCCGCTCCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCa             <  2:2044135/93‑1 (MQ=255)

                                                                               tGAGCAAGCTCCGCTGCCTGCTTCCCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGc          <  1:2952205/93‑1 (MQ=255)

                                                                                 aGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGcac        >  1:205381/1‑93 (MQ=255)

                                                                                 aGCAAGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGcac        <  2:3491522/93‑1 (MQ=255)

                                                                                   cAAGCTCCGCTCCCTCCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACag      <  1:5450302/93‑1 (MQ=255)

                                                                                    aaGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACaga     <  2:537089/93‑1 (MQ=255)

                                                                                    aaGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACaga     >  2:2990199/1‑93 (MQ=255)

                                                                                     aGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACagag    >  2:1448762/1‑93 (MQ=255)

                                                                                     aGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACagag    >  2:2797008/1‑93 (MQ=255)

                                                                                     aGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACagag    <  2:6466707/93‑1 (MQ=255)

                                                                                     aGCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACagag    >  1:1515891/1‑93 (MQ=255)

                                                                                      gCTCCGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGc   <  1:4878823/93‑1 (MQ=255)

CGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCTGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCG  >  NC_000913/3882862‑3883041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`