BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,893,920	C→T	G107S (GGC→AGC)	yieG ←	putative membrane/transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,893,920	0	C	T	100.0%	1129.2 / NA	289	G107S (GGC→AGC)	yieG	putative membrane/transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (141/148); total (141/148)

Only 100 of 293 total aligned reads displayed.

TCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCA  >  NC_000913/3893830‑3894009

tcatcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCTCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCa                                                                                         <  1:1631901/93‑1 (MQ=255)

       gTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTg                                                                                  >  2:1482809/1‑93 (MQ=255)

        tAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGt                                                                                 >  2:243032/1‑93 (MQ=255)

         aGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTa                                                                                >  2:528748/1‑93 (MQ=255)

          gCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAc                                                                               >  1:640354/1‑93 (MQ=255)

          gCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAc                                                                               >  1:522994/1‑93 (MQ=255)

           cGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACa                                                                              >  1:2359037/1‑93 (MQ=255)

             aaCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAc                                                                            <  2:3580328/93‑1 (MQ=255)

             aaCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAc                                                                            >  2:5149549/1‑93 (MQ=255)

              aCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAca                                                                           >  1:4946158/1‑92 (MQ=255)

                gcgGAAAATAGTCAGTAACAGCCGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGACAAGCTCATCGCCTGTACaacaac                                                                         <  1:4017020/93‑1 (MQ=37)

                  ggAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAcaacaacaa                                                                       <  2:3554611/93‑1 (MQ=255)

                    aaaaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACaaaa                                                                     <  2:6368916/93‑1 (MQ=255)

                    aaaaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACaaaa                                                                     >  1:807266/1‑93 (MQ=255)

                     aaaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAg                                                                    <  1:2900972/93‑1 (MQ=255)

                      aaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGc                                                                   >  1:6364039/1‑93 (MQ=255)

                       aTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCg                                                                  >  1:1001698/1‑93 (MQ=255)

                        tCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCga                                                                 <  2:4578529/93‑1 (MQ=255)

                         cGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCgaa                                                                <  2:3234766/93‑1 (MQ=255)

                         cGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCgaa                                                                >  2:3672346/1‑93 (MQ=255)

                         cGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCgaa                                                                >  1:4379592/1‑93 (MQ=255)

                           tCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCTTCCCGACCTGCCACGGAAAGCTCATCGCCTGTACAACAACAAAAGGgagaa                                                              >  1:5539149/1‑90 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAc                                                            <  1:4211186/93‑1 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAc                                                            >  1:5073707/1‑93 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAc                                                            <  1:690233/93‑1 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAc                                                            <  2:864954/93‑1 (MQ=255)

                              gTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACg                                                           >  2:1052066/1‑93 (MQ=255)

                               tAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGc                                                          >  2:419605/1‑93 (MQ=255)

                                  cagcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCAtt                                                       >  1:4502612/1‑93 (MQ=255)

                                  cagcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCAtt                                                       <  2:5039017/93‑1 (MQ=255)

                                   agcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTc                                                      >  1:1142339/1‑93 (MQ=255)

                                   agcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTc                                                      <  2:5101827/93‑1 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCa                                                     >  1:3883778/1‑93 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCa                                                     >  2:6037681/1‑93 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCa                                                     <  2:3535811/93‑1 (MQ=255)

                                     cagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAg                                                    <  1:1287809/93‑1 (MQ=255)

                                      agACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAgg                                                   >  2:759237/1‑93 (MQ=255)

                                       gACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGc                                                  >  1:756746/1‑93 (MQ=255)

                                       gACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGc                                                  >  1:3164307/1‑93 (MQ=255)

                                        cccTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGcc                                                 <  2:3062581/92‑1 (MQ=255)

                                        aCCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGcc                                                 >  2:1358298/1‑93 (MQ=255)

                                         ccTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGccc                                                <  2:4355245/93‑1 (MQ=255)

                                          cTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCa                                               >  1:2173226/1‑93 (MQ=255)

                                          cTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCa                                               >  2:3852198/1‑93 (MQ=255)

                                           tATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAt                                              >  1:4690220/1‑93 (MQ=255)

                                           tATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAt                                              >  2:2507596/1‑93 (MQ=255)

                                           tATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAt                                              >  2:2190386/1‑93 (MQ=255)

                                           tATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGCCCCAt                                              <  1:2387087/93‑1 (MQ=255)

                                            aTCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATa                                             >  1:2258532/1‑93 (MQ=255)

                                            aTCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATa                                             <  2:3298208/93‑1 (MQ=255)

                                            aTCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATa                                             >  2:4707678/1‑93 (MQ=255)

                                              cgcgCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGc                                           <  2:2819227/93‑1 (MQ=255)

                                               gcgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCg                                          <  1:2550359/93‑1 (MQ=255)

                                               gcgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCg                                          <  1:2805986/93‑1 (MQ=255)

                                                cgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCgg                                         <  2:5394972/93‑1 (MQ=255)

                                                 gcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCggg                                        >  2:5211364/1‑93 (MQ=255)

                                                     cAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGcc                                    >  2:5857833/1‑93 (MQ=255)

                                                     cAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGcc                                    >  1:6118649/1‑93 (MQ=255)

                                                       gaagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAg                                  >  1:4392768/1‑93 (MQ=255)

                                                        aagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGt                                 <  2:6132268/93‑1 (MQ=255)

                                                        aagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGt                                 <  1:89534/93‑1 (MQ=255)

                                                          gaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGc                               >  2:5980488/1‑93 (MQ=255)

                                                            ttGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCaa                             <  2:6119534/93‑1 (MQ=255)

                                                             tGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAAc                            <  1:4250154/93‑1 (MQ=255)

                                                             tGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAAc                            <  2:5427728/93‑1 (MQ=255)

                                                              gcgcCCATCCCGCCCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACt                           <  2:34126/93‑1 (MQ=255)

                                                              gcgcCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACt                           <  1:3311585/93‑1 (MQ=255)

                                                                 cccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc                        >  1:4830606/1‑93 (MQ=255)

                                                                 cccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc                        <  1:3210846/93‑1 (MQ=255)

                                                                 cccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc                        <  1:4113922/93‑1 (MQ=255)

                                                                 cccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc                        >  1:541162/1‑93 (MQ=255)

                                                                  ccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCa                       <  2:1605410/93‑1 (MQ=255)

                                                                  ccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCa                       >  1:3004248/1‑93 (MQ=255)

                                                                   cATCCCGCCCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAg                      <  2:4111311/93‑1 (MQ=255)

                                                                   cATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAg                      <  2:1150118/93‑1 (MQ=255)

                                                                    aTCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAgg                     >  1:5791679/1‑93 (MQ=255)

                                                                        cGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAg                 <  2:193897/93‑1 (MQ=255)

                                                                        cGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAg                 >  1:1760667/1‑93 (MQ=255)

                                                                        cGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCACATAGCGGGTGCCAGTGCAACTGGCAGGTTAg                 >  2:640863/1‑93 (MQ=255)

                                                                         gACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGc                >  1:5883062/1‑93 (MQ=255)

                                                                         gACCTGCCACGGCAAGCTCAGCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGc                <  1:2644673/93‑1 (MQ=255)

                                                                          aCCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCa               >  1:1864482/1‑93 (MQ=255)

                                                                           ccTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCaa              <  1:5773806/93‑1 (MQ=255)

                                                                             tGCCACGGCAAGCTCATCGCCTGTACAACAGCAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAc            <  1:351993/93‑1 (MQ=255)

                                                                             tGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAc            >  2:3848471/1‑93 (MQ=255)

                                                                             tGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAc            <  2:4459615/93‑1 (MQ=255)

                                                                              gCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGGCCGTGGAACTGGCAGGTTAGCAAACa           >  1:6008575/1‑93 (MQ=255)

                                                                              gCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACa           <  1:3641582/93‑1 (MQ=255)

                                                                              gCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACa           <  2:660053/93‑1 (MQ=255)

                                                                                 aCGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTc        <  2:5750910/93‑1 (MQ=255)

                                                                                 aCGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTc        <  1:3839380/93‑1 (MQ=255)

                                                                                  cGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTcc       <  2:4897475/93‑1 (MQ=255)

                                                                                  cGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTcc       <  1:6478342/93‑1 (MQ=255)

                                                                                  cGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTcc       <  1:2842883/93‑1 (MQ=255)

                                                                                   ggCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTccc      <  2:3330358/93‑1 (MQ=255)

                                                                                     cAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcat    >  2:1738254/1‑93 (MQ=255)

                                                                                      aaGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcatc   >  2:3920966/1‑93 (MQ=255)

                                                                                      aaGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcata   >  2:4282768/1‑92 (MQ=255)

                                                                                       aGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcatca  >  2:2069655/1‑93 (MQ=255)

                                                                                       aGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcatca  <  1:1962138/93‑1 (MQ=255)

TCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCA  >  NC_000913/3893830‑3894009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`