Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 418,805 A→G intergenic (+397/‑10) phoR → / → brnQ positive and negative sensor protein for pho regulon/branched chain amino acid transport system II carrier protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913418,8050AG100.0% 804.1 / NA 228intergenic (+397/‑10)phoR/brnQpositive and negative sensor protein for pho regulon/branched chain amino acid transport system II carrier protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (131/97);  total (131/97)

Only 100 of 233 total aligned reads displayed.

TATTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACAT  >  NC_000913/418715‑418894
                                                                                          |                                                                                         
 aTTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTa                                                                                        >  2:662661/1‑93 (MQ=255)
 aTTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTa                                                                                        <  2:5428210/93‑1 (MQ=255)
 aTTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTa                                                                                        <  1:1789027/93‑1 (MQ=255)
 aTTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTa                                                                                        >  2:6288749/1‑93 (MQ=255)
  tttCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTAt                                                                                       >  1:5615665/1‑93 (MQ=255)
  tttCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTAt                                                                                       >  1:712986/1‑93 (MQ=255)
    tCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGa                                                                                     <  1:1871843/93‑1 (MQ=255)
     cccGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAt                                                                                    <  2:4290451/93‑1 (MQ=255)
      ccGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAtt                                                                                   >  2:6032682/1‑93 (MQ=255)
      ccGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAtt                                                                                   >  1:5296220/1‑93 (MQ=255)
      ccGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAtt                                                                                   >  2:234569/1‑93 (MQ=255)
       cGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAttt                                                                                  >  1:2244254/1‑93 (MQ=255)
       cGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAttt                                                                                  >  2:2803241/1‑93 (MQ=255)
          tAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATg                                                                               >  2:1925290/1‑93 (MQ=255)
           aaaaTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGa                                                                              >  2:789922/1‑93 (MQ=255)
            aaaTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGAc                                                                             >  1:3623640/1‑93 (MQ=255)
              aTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGAccc                                                                           <  1:248471/93‑1 (MQ=255)
               ttGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACTACATCCACAGGCGGTCTGATTTATGagcta                                                                          >  1:382558/1‑89 (MQ=255)
               ttGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCa                                                                          >  1:5937613/1‑93 (MQ=255)
                  tttAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCa                                                                       >  1:2491284/1‑93 (MQ=255)
                   ttAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCaa                                                                      >  2:2791552/1‑93 (MQ=255)
                       atatACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTaa                                                                  <  1:779645/93‑1 (MQ=255)
                       atatACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTaa                                                                  <  1:3166642/93‑1 (MQ=255)
                       atatACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTaa                                                                  >  2:4812597/1‑93 (MQ=255)
                        tataCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGGATGATTTATGACCCATCAATTAAg                                                                 >  1:5817760/1‑93 (MQ=255)
                         ataCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGa                                                                >  1:3887415/1‑93 (MQ=255)
                          taCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCGATCAATTAAGAt                                                               >  1:3351193/1‑93 (MQ=255)
                          taCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGAt                                                               <  1:1427922/93‑1 (MQ=255)
                           aCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATc                                                              >  1:4210547/1‑93 (MQ=255)
                             cGCTGTATCATGCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcgc                                                            <  1:1046131/93‑1 (MQ=255)
                              gCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcgcg                                                           >  1:3301025/1‑93 (MQ=255)
                                 gTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGa                                                        >  2:135038/1‑93 (MQ=255)
                                 gTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGa                                                        >  2:1254448/1‑93 (MQ=255)
                                  tATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGat                                                       >  2:3591953/1‑93 (MQ=255)
                                   atcatcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGata                                                      <  2:2005715/93‑1 (MQ=255)
                                     catcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATatc                                                    <  2:4828122/93‑1 (MQ=255)
                                      atcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATatca                                                   <  2:1211103/93‑1 (MQ=255)
                                      atcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATatca                                                   >  1:6065190/1‑93 (MQ=255)
                                       tcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATatcat                                                  <  2:4076537/93‑1 (MQ=255)
                                        ccccAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATatcatc                                                 <  2:3523578/93‑1 (MQ=255)
                                          ccAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGc                                               <  2:4950843/93‑1 (MQ=255)
                                           cAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGct                                              >  1:2790858/1‑93 (MQ=255)
                                            aGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctc                                             <  2:2103877/93‑1 (MQ=255)
                                             gggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctct                                            <  1:5494629/93‑1 (MQ=255)
                                             gggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctct                                            >  1:1161353/1‑93 (MQ=255)
                                             gggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctct                                            >  2:4710627/1‑93 (MQ=255)
                                             gggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctct                                            >  1:3529956/1‑93 (MQ=255)
                                             aggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctct                                            <  2:1650393/92‑1 (MQ=255)
                                               gATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTgg                                          <  2:3969724/93‑1 (MQ=255)
                                               gATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTgg                                          >  1:4751385/1‑93 (MQ=255)
                                                  tGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCt                                       <  1:3903889/93‑1 (MQ=255)
                                                   ggCACAAAAATTTAACGTTACAACACCATATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCtt                                      >  1:4077269/1‑93 (MQ=255)
                                                    gCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCttt                                     <  1:2310736/93‑1 (MQ=255)
                                                      acaAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTAt                                   >  2:2722946/1‑93 (MQ=255)
                                                      acaAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTAt                                   >  2:2967364/1‑93 (MQ=255)
                                                      acaAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTAt                                   <  2:3838683/93‑1 (MQ=255)
                                                       caAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATg                                  >  2:4272570/1‑93 (MQ=255)
                                                         aaaaTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGAc                                >  2:4422333/1‑93 (MQ=255)
                                                          aaaTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACa                               >  2:1015480/1‑93 (MQ=255)
                                                            aTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACAtt                             <  2:5590633/93‑1 (MQ=255)
                                                             tttAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACAttt                            <  1:3424970/93‑1 (MQ=255)
                                                             tttAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACAttt                            <  1:3142558/93‑1 (MQ=255)
                                                             tttAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACAttt                            >  2:4052967/1‑93 (MQ=255)
                                                             tttAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACAttt                            <  1:995994/93‑1 (MQ=255)
                                                             tttAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACAttt                            <  1:1917317/93‑1 (MQ=255)
                                                              ttAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTg                           >  1:5033996/1‑93 (MQ=255)
                                                                 aCGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgt                        >  1:924197/1‑93 (MQ=255)
                                                                 aCGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgt                        <  1:4647590/93‑1 (MQ=255)
                                                                 aCGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgt                        <  1:102262/93‑1 (MQ=255)
                                                                    ttACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgttgt                     <  1:536450/93‑1 (MQ=255)
                                                                      acaacaCCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtc                   <  2:5266984/93‑1 (MQ=255)
                                                                       caacaCCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtct                  >  1:4420264/1‑92 (MQ=255)
                                                                       caacaCCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtcg                  >  1:673825/1‑93 (MQ=255)
                                                                        aacaCCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtcgt                 >  1:4853867/1‑93 (MQ=255)
                                                                        aacaCCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtcgt                 <  1:300159/93‑1 (MQ=255)
                                                                        aacaCCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtcgt                 >  1:3201201/1‑93 (MQ=255)
                                                                         acacCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtcgtc                >  1:2942679/1‑93 (MQ=255)
                                                                         acacCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtcgtc                <  2:2378620/93‑1 (MQ=255)
                                                                           accacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCgg              >  2:5792089/1‑93 (MQ=255)
                                                                           accacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCgg              <  1:5149270/93‑1 (MQ=255)
                                                                           accacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCgg              >  1:6401735/1‑93 (MQ=255)
                                                                           accacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGAAATTTGCGTTGTTCGTCgg              >  1:5716733/1‑93 (MQ=255)
                                                                             cacaTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTTGGCTTTATGACATTTGCGTTGTTCGTCGgcg            >  1:6298793/1‑93 (MQ=255)
                                                                              acaTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGgcgc           >  2:4144178/1‑93 (MQ=255)
                                                                               caTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCa          >  1:4321073/1‑93 (MQ=255)
                                                                                aTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAg         <  2:6114501/93‑1 (MQ=255)
                                                                                 tCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAgg        <  1:798120/93‑1 (MQ=255)
                                                                                 tCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAgg        >  2:3691630/1‑93 (MQ=255)
                                                                                  ccACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGt       >  1:2435223/1‑93 (MQ=255)
                                                                                   cacaGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTa      <  1:2260326/93‑1 (MQ=255)
                                                                                    acaGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTaa     <  2:3018792/93‑1 (MQ=255)
                                                                                    acaGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTaa     >  2:3347698/1‑93 (MQ=255)
                                                                                     caGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAAc    >  1:372698/1‑93 (MQ=255)
                                                                                     caGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAAc    >  1:5725202/1‑93 (MQ=255)
                                                                                      aGGCGGTATGATTTATGAGCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACa   >  1:5244919/1‑93 (MQ=255)
                                                                                      aGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACa   <  2:4539116/93‑1 (MQ=255)
                                                                                      aGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACa   <  2:4778967/93‑1 (MQ=255)
                                                                                       ggCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAAcgt  >  2:2551321/1‑91 (MQ=255)
                                                                                       ggCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACat  >  1:4895677/1‑93 (MQ=255)
                                                                                       ggCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACat  >  2:31200/1‑93 (MQ=255)
                                                                                          |                                                                                         
TATTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACAT  >  NC_000913/418715‑418894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: