Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 434,599 T→C V80A (GTA→GCA)  nusB → transcription termination

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913434,5990TC100.0% 960.0 / NA 273V80A (GTA→GCA) nusBtranscription termination
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (144/129);  total (144/129)

Only 100 of 275 total aligned reads displayed.

AGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGA  >  NC_000913/434509‑434686
                                                                                          |                                                                                       
aGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAg                                                                                       <  1:2368512/93‑1 (MQ=255)
 gctgctGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGa                                                                                      >  1:5691827/1‑93 (MQ=255)
   tgctgGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGaaa                                                                                    >  1:1725136/1‑93 (MQ=255)
    gctgGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGaaaa                                                                                   >  1:4114454/1‑93 (MQ=255)
     ctgGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGaaaaa                                                                                  >  1:4532967/1‑93 (MQ=255)
      tgGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAg                                                                                 >  2:61228/1‑93 (MQ=255)
      tgGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAg                                                                                 <  2:5455053/93‑1 (MQ=255)
       ggCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGc                                                                                >  2:3425582/1‑93 (MQ=255)
       ggCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGc                                                                                >  1:3334918/1‑93 (MQ=255)
       ggCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGc                                                                                >  2:1211812/1‑93 (MQ=255)
        gCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCa                                                                               <  1:5289594/93‑1 (MQ=255)
        gCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCa                                                                               <  2:801713/93‑1 (MQ=255)
           ggggTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTa                                                                            <  2:1548694/93‑1 (MQ=255)
            gggTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTAc                                                                           <  1:2546705/93‑1 (MQ=255)
             ggTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACt                                                                          >  2:2742638/1‑93 (MQ=255)
              gTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTg                                                                         <  2:203247/93‑1 (MQ=255)
               tGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTgc                                                                        <  2:2962657/93‑1 (MQ=255)
               tGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTgc                                                                        >  1:5859228/1‑93 (MQ=255)
               tGGCGACGACTACCGCATACCTCGACGGACTGCTGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTgc                                                                        <  2:2610555/93‑1 (MQ=255)
                ggCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTgcg                                                                       <  2:1289184/93‑1 (MQ=255)
                  cGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCa                                                                     >  1:1461939/1‑93 (MQ=255)
                    aCTAATACCGCATCCCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCAtt                                                                   <  1:262414/93‑1 (MQ=255)
                    aCTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCAtt                                                                   <  2:5144524/93‑1 (MQ=255)
                    aCTAATACAGCATACCTCGTCGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCAtt                                                                   >  1:6319160/1‑93 (MQ=255)
                      tAATCCCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTgc                                                                 <  1:1412143/93‑1 (MQ=255)
                      tAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTgc                                                                 <  2:142373/93‑1 (MQ=255)
                      tAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTgc                                                                 <  2:2883356/93‑1 (MQ=255)
                        aTACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTgcgc                                                               <  2:6020599/93‑1 (MQ=255)
                         tACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCt                                                              <  1:457824/93‑1 (MQ=255)
                           ccGCATACCTCGACGAACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGt                                                            <  1:1675592/93‑1 (MQ=255)
                            cGCATACCTCGACGGACTGATGCAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTa                                                           <  2:6267794/93‑1 (MQ=255)
                             gCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTAc                                                          >  2:4162763/1‑93 (MQ=255)
                             gCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTAc                                                          >  1:6201494/1‑93 (MQ=255)
                              cATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACg                                                         >  2:1755265/1‑93 (MQ=255)
                               aTACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGa                                                        >  1:4957178/1‑93 (MQ=255)
                                tACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGaa                                                       <  1:1022235/93‑1 (MQ=255)
                                 aCCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAAc                                                      >  2:4707531/1‑93 (MQ=255)
                                 aCCTCGACGGACTGATAAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAAc                                                      <  1:6239649/93‑1 (MQ=255)
                                  ccTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACt                                                     <  2:5860078/93‑1 (MQ=255)
                                      gACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCt                                                 >  1:5937990/1‑93 (MQ=255)
                                      gACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCt                                                 >  1:1948144/1‑93 (MQ=255)
                                      gACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCt                                                 >  1:2194110/1‑93 (MQ=255)
                                         ggACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTaaa                                              >  2:3186019/1‑93 (MQ=255)
                                          gACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAAc                                             >  1:5990390/1‑93 (MQ=255)
                                          gACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAAc                                             >  1:6170577/1‑93 (MQ=255)
                                          gACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAAc                                             <  2:4855349/93‑1 (MQ=255)
                                              gatgaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAg                                         <  2:4468616/93‑1 (MQ=255)
                                              gatgaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAg                                         >  2:310914/1‑93 (MQ=255)
                                                  aaGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAt                                     >  1:5219787/1‑93 (MQ=255)
                                                  aaGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAt                                     >  1:4715164/1‑93 (MQ=255)
                                                  aaGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAt                                     <  2:5195869/93‑1 (MQ=255)
                                                   aGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAtg                                    <  1:2857034/93‑1 (MQ=255)
                                                    gCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAtgt                                   >  2:5566288/1‑93 (MQ=255)
                                                    gCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAtgt                                   <  1:5089707/93‑1 (MQ=255)
                                                      cATACCTGTCCAGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGc                                 <  1:4255724/93‑1 (MQ=255)
                                                       aTACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGcc                                <  2:5587611/93‑1 (MQ=255)
                                                       aTACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGcc                                <  1:3716078/93‑1 (MQ=255)
                                                        tACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCa                               >  2:1025386/1‑93 (MQ=255)
                                                        tACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCa                               <  2:5406378/93‑1 (MQ=255)
                                                        tACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCa                               >  2:2374110/1‑93 (MQ=255)
                                                        tACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCa                               >  1:3016612/1‑93 (MQ=255)
                                                         aCCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCAt                              >  2:3133985/1‑93 (MQ=255)
                                                          ccTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATa                             >  2:234395/1‑93 (MQ=255)
                                                          ccTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATa                             >  1:3636633/1‑93 (MQ=255)
                                                          ccTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATa                             >  2:5043598/1‑93 (MQ=255)
                                                           cTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATAc                            >  2:827504/1‑93 (MQ=255)
                                                           cTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATAc                            >  1:347417/1‑93 (MQ=255)
                                                             gTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACaa                          >  2:5743869/1‑93 (MQ=255)
                                                              tCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACaaa                         <  2:5184264/93‑1 (MQ=255)
                                                              tCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACaaa                         <  1:2340737/93‑1 (MQ=255)
                                                              tCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACaaa                         >  2:2466824/1‑93 (MQ=255)
                                                               cccGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACagag                        >  2:4219000/1‑93 (MQ=255)
                                                               cccGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAg                        >  2:4435660/1‑93 (MQ=255)
                                                                ccGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGt                       <  2:6374976/93‑1 (MQ=255)
                                                                 cGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTg                      >  1:1522795/1‑93 (MQ=255)
                                                                 cGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTg                      <  2:631741/93‑1 (MQ=255)
                                                                   ccTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGc                    >  2:9192/1‑93 (MQ=255)
                                                                    ctgctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGcc                   >  2:3503339/1‑93 (MQ=255)
                                                                    ctgctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGcc                   <  1:2039794/93‑1 (MQ=255)
                                                                    ctgctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGcc                   <  2:680334/93‑1 (MQ=255)
                                                                     tgctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCa                  >  1:1089740/1‑93 (MQ=255)
                                                                     tgctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCa                  >  1:4496006/1‑93 (MQ=255)
                                                                      gctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCAt                 <  1:1144886/93‑1 (MQ=255)
                                                                      gctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCAt                 >  2:3631373/1‑93 (MQ=255)
                                                                        tgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTa               <  1:935895/93‑1 (MQ=255)
                                                                          gaagaaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAAc             >  2:1349888/1‑93 (MQ=255)
                                                                           aagaaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACg            >  1:3214922/1‑93 (MQ=255)
                                                                             gaaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGaa          <  1:688953/93‑1 (MQ=255)
                                                                              aaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAg         >  1:4739046/1‑93 (MQ=255)
                                                                                ccgggCCAGGCAGAAAAAGAAGTACTGCGCATTGCGGTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCg       <  1:225514/91‑1 (MQ=255)
                                                                                 tGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGa      >  2:5806028/1‑93 (MQ=255)
                                                                                  gggACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGAt     >  2:391465/1‑93 (MQ=255)
                                                                                  gggACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGAt     <  1:5596681/93‑1 (MQ=255)
                                                                                   ggACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATc    <  2:105775/93‑1 (MQ=255)
                                                                                   ggACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATc    <  1:1216162/93‑1 (MQ=255)
                                                                                    gACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCg   >  1:3606900/1‑93 (MQ=255)
                                                                                    gACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCg   >  2:5936731/1‑93 (MQ=255)
                                                                                    gACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCg   <  1:131417/93‑1 (MQ=255)
                                                                                     aCAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGa  <  2:4188839/93‑1 (MQ=255)
                                                                                     aCAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGa  <  2:94783/93‑1 (MQ=255)
                                                                                          |                                                                                       
AGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGA  >  NC_000913/434509‑434686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: