Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 481,922 T→C Q569R (CAG→CGG)  acrB ← acridine efflux pump

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913481,9220TC100.0% 850.4 / NA 244Q569R (CAG→CGG) acrBacridine efflux pump
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (114/130);  total (114/130)

Only 100 of 255 total aligned reads displayed.

AGATAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCTGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTAACGC  >  NC_000913/481832‑482011
                                                                                          |                                                                                         
aGATAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCgg                                                                                         >  2:4339177/1‑93 (MQ=255)
aGATAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCgg                                                                                         >  1:1535002/1‑93 (MQ=255)
aGATAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCgg                                                                                         >  1:4688025/1‑93 (MQ=255)
 gATAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCggc                                                                                        >  2:4836710/1‑92 (MQ=255)
 gATAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGt                                                                                        >  1:4965018/1‑93 (MQ=255)
 gATAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGt                                                                                        <  1:2612786/93‑1 (MQ=255)
   tAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTcc                                                                                      <  1:400600/93‑1 (MQ=255)
    aGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCt                                                                                     <  1:4153294/93‑1 (MQ=255)
    aGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCt                                                                                     <  1:5972938/93‑1 (MQ=255)
     gTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTc                                                                                    <  2:3658281/93‑1 (MQ=255)
      tAATGCTTTCCCTCATTGAGCATTTTCTGTGTACGTCCCTGCTTTGCCCCTGCGGGCAGCTGACCCATGGTCATAAACACGCCCCGGTCCTCa                                                                                   <  2:3293929/93‑1 (MQ=255)
        aTGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATc                                                                                 >  2:524134/1‑93 (MQ=255)
          gCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATCGTCATAAACACGCCCCGGTCCTCATCTg                                                                               >  2:2294575/1‑93 (MQ=255)
             ttACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCa                                                                            >  2:711077/1‑93 (MQ=255)
             ttACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCCGTCCTCATCTGGCa                                                                            >  1:6452782/1‑93 (MQ=255)
               aCCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCaag                                                                          >  1:5845500/1‑93 (MQ=255)
               aCCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCaag                                                                          >  1:82602/1‑93 (MQ=255)
                 cTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCaagaa                                                                        >  1:2408190/1‑93 (MQ=255)
                 cTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCaagaa                                                                        <  1:4278560/93‑1 (MQ=255)
                 cTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGTCATAAACACGCCCCGGTCCCCCTCTGGCaagaag                                                                       >  2:2163991/1‑93 (MQ=255)
                  tCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCGCCGGTCCTCATCTGGCaagaag                                                                       >  1:2186918/1‑93 (MQ=255)
                  tCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCaagaag                                                                       <  1:5240825/93‑1 (MQ=255)
                    aTTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGa                                                                     >  1:687259/1‑93 (MQ=255)
                     ttGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAg                                                                    <  1:2121053/93‑1 (MQ=255)
                     ttGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAg                                                                    >  2:5896430/1‑93 (MQ=255)
                     ttGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAAACATGGGCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAg                                                                    >  2:2649965/1‑93 (MQ=255)
                      tGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGc                                                                   >  1:1286197/1‑93 (MQ=255)
                        aGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCtt                                                                 <  1:1178705/93‑1 (MQ=255)
                         gCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTg                                                                >  1:3231932/1‑93 (MQ=255)
                         gCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTg                                                                <  1:4622781/93‑1 (MQ=255)
                          cACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTgg                                                               <  2:3976398/93‑1 (MQ=255)
                           aCTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGc                                                              >  1:3438855/1‑93 (MQ=255)
                           aCTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGc                                                              <  1:3050353/93‑1 (MQ=255)
                           aCTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGc                                                              <  1:2271899/93‑1 (MQ=255)
                            cTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACTATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCa                                                             <  1:3882759/93‑1 (MQ=255)
                            cTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCa                                                             >  1:2785907/1‑93 (MQ=255)
                              ttCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGa                                                           >  2:5416157/1‑93 (MQ=255)
                               tCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGAc                                                          >  1:5391988/1‑93 (MQ=255)
                               tCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGAc                                                          <  1:5411771/93‑1 (MQ=255)
                                cTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACg                                                         >  1:2919472/1‑93 (MQ=255)
                                   ttgaCGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCAc                                                      <  2:5176014/90‑1 (MQ=255)
                                   tgtACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCAc                                                      <  2:4603853/93‑1 (MQ=255)
                                   tgtACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCAc                                                      <  1:2993459/93‑1 (MQ=255)
                                    gtACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACg                                                     >  2:2564239/1‑93 (MQ=255)
                                       cGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAAc                                                  <  1:1370563/93‑1 (MQ=255)
                                       cGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAAc                                                  <  2:4546519/93‑1 (MQ=255)
                                        gTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACa                                                 <  2:2569039/93‑1 (MQ=255)
                                         ttCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAg                                                >  1:3721603/1‑93 (MQ=255)
                                          tCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGa                                               >  1:3406264/1‑93 (MQ=255)
                                          tCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGa                                               <  2:6162501/93‑1 (MQ=255)
                                          tCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGa                                               <  2:4190931/93‑1 (MQ=255)
                                          tCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGa                                               <  2:1314460/93‑1 (MQ=255)
                                            cTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATa                                             <  2:1825993/93‑1 (MQ=255)
                                              tcGTTGCCCCTGCGGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAgg                                           <  1:23468/92‑1 (MQ=255)
                                               cGTTGCACCTGGTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGc                                          <  2:3384870/93‑1 (MQ=255)
                                                   gCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATg                                      >  1:5548042/1‑93 (MQ=255)
                                                    cACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGc                                     >  2:5004141/1‑93 (MQ=255)
                                                    cACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGc                                     >  2:3857695/1‑93 (MQ=255)
                                                     aCCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGcc                                    >  2:4122244/1‑93 (MQ=255)
                                                      ccTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCg                                   >  2:109691/1‑93 (MQ=255)
                                                      ccTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCg                                   >  2:1904545/1‑93 (MQ=255)
                                                      ccTGCTGGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCg                                   >  2:5863686/1‑93 (MQ=255)
                                                       ctgctgGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGa                                  <  2:2782190/93‑1 (MQ=255)
                                                       ctgctgGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGa                                  >  1:2008714/1‑93 (MQ=255)
                                                        tgctgGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGAc                                 >  2:5528307/1‑93 (MQ=255)
                                                         gctgGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGAcc                                <  2:5292221/93‑1 (MQ=255)
                                                          ctgGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCCCGAACAGATAGGCCATGCCGACCa                               <  1:1761595/93‑1 (MQ=255)
                                                           tgGCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCAc                              <  2:4675057/93‑1 (MQ=255)
                                                            ggCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACg                             >  1:3824646/1‑93 (MQ=255)
                                                             gCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACga                            <  1:4845571/93‑1 (MQ=255)
                                                             gCAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACga                            <  1:6375678/93‑1 (MQ=255)
                                                              cAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACgat                           <  2:2040602/93‑1 (MQ=255)
                                                              cAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACgat                           <  1:3581057/93‑1 (MQ=255)
                                                              cAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACgat                           <  2:3205511/93‑1 (MQ=255)
                                                              cAGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACgat                           <  2:3610802/93‑1 (MQ=255)
                                                               aGCTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACgatg                          >  2:195602/1‑93 (MQ=255)
                                                                 cTGAACCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACgatgat                        >  1:5936710/1‑93 (MQ=255)
                                                                    aaCCATGGTCATAAGCGCGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAg                     <  2:3902507/93‑1 (MQ=255)
                                                                     aCCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGa                    <  1:3943198/93‑1 (MQ=255)
                                                                     aCCATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGa                    <  1:435813/93‑1 (MQ=255)
                                                                      ccATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGAt                   <  2:3083606/93‑1 (MQ=255)
                                                                       cATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATa                  <  2:1566885/93‑1 (MQ=255)
                                                                       cATGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATa                  >  1:27416/1‑93 (MQ=255)
                                                                         tGGTCATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACa                >  1:5621943/1‑93 (MQ=255)
                                                                             cATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCAc            <  1:3665797/93‑1 (MQ=255)
                                                                             cATAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCAc            <  1:425767/93‑1 (MQ=255)
                                                                              aTAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCAcc           <  2:3016368/93‑1 (MQ=255)
                                                                               tAAACACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCa          <  1:6015634/93‑1 (MQ=255)
                                                                                aaaCACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAg         <  1:1336513/93‑1 (MQ=255)
                                                                                aaaCACGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAg         <  2:6252284/93‑1 (MQ=255)
                                                                                  acacGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGt       >  1:1048937/1‑93 (MQ=255)
                                                                                  acacGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGt       <  1:1667122/93‑1 (MQ=255)
                                                                                   cacGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTa      <  2:1732430/93‑1 (MQ=255)
                                                                                    acGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTaa     <  2:4969754/93‑1 (MQ=255)
                                                                                    acGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTaa     >  2:1052919/1‑93 (MQ=255)
                                                                                     cGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTAAc    <  1:4425419/93‑1 (MQ=255)
                                                                                     cGCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTAAc    <  2:2448293/93‑1 (MQ=255)
                                                                                      gCCCCGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTAACg   <  2:143701/93‑1 (MQ=255)
                                                                                       ccccGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTAACGc  >  1:881222/1‑93 (MQ=255)
                                                                                       ccccGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTAACGc  >  2:4248304/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGATAGTAATGCGTTACCTCATTGAGCACTTTCTGTGTACGTTCCTGCGTTGCACCTGCTGGCAGCTGAACCATGGTCATAAACACGCCCTGGTCCTCATCTGGCAAGAAGGAGCTTGGCAGACGCACGAACAGATAGGCCATGCCGACCACGATGATCAGATACAGCACCAGGTAACGC  >  NC_000913/481832‑482011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: