Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 517,074 A→G S144P (TCG→CCG)  ybbN ← putative thioredoxin‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913517,0740AG99.6% 846.0 / NA 242S144P (TCG→CCG) ybbNputative thioredoxin‑like protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (109/132);  minor base C (0/1);  total (109/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 248 total aligned reads displayed.

TGGTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGACAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCAGCTCTT  >  NC_000913/516984‑517163
                                                                                          |                                                                                         
tGGTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCa                                                                                         >  1:1018018/1‑93 (MQ=255)
tGGTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCa                                                                                         >  1:1366571/1‑93 (MQ=255)
 ggTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCaa                                                                                        <  1:158483/93‑1 (MQ=255)
  gTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAAc                                                                                       >  1:5917982/1‑93 (MQ=255)
  gTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAAc                                                                                       >  1:911528/1‑93 (MQ=255)
  gTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAAc                                                                                       >  2:167924/1‑93 (MQ=255)
  gTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAAc                                                                                       <  2:5893645/93‑1 (MQ=255)
   ttttCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACt                                                                                      <  1:4425499/93‑1 (MQ=255)
        aGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAg                                                                                 <  1:353813/93‑1 (MQ=255)
        aGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAg                                                                                 >  2:46671/1‑93 (MQ=255)
         gCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAgg                                                                                >  1:3708890/1‑93 (MQ=255)
         gCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAgg                                                                                >  1:4314948/1‑93 (MQ=255)
         gCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAgg                                                                                <  1:2172193/93‑1 (MQ=255)
           aCCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCg                                                                              >  2:5833530/1‑93 (MQ=255)
           aCCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCg                                                                              >  1:2113514/1‑93 (MQ=255)
            ccGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGt                                                                             >  2:4750953/1‑93 (MQ=255)
             cGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTc                                                                            <  2:2267517/93‑1 (MQ=255)
             cGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTc                                                                            >  1:2704981/1‑93 (MQ=255)
              gCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCt                                                                           <  2:5616337/93‑1 (MQ=255)
                 tCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTc                                                                        <  2:1765767/93‑1 (MQ=255)
                 tCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTc                                                                        <  1:34388/93‑1 (MQ=255)
                 tCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTc                                                                        <  2:5643247/93‑1 (MQ=255)
                    gCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGc                                                                     >  2:1153218/1‑93 (MQ=255)
                     cATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCa                                                                    <  2:6368758/93‑1 (MQ=255)
                      aTCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCaa                                                                   >  1:5217294/1‑93 (MQ=255)
                          tCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGc                                                               <  1:1574289/93‑1 (MQ=255)
                          tCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGc                                                               >  2:3141934/1‑93 (MQ=255)
                           cAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCa                                                              <  1:4106246/93‑1 (MQ=255)
                           cAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCa                                                              <  1:6357396/93‑1 (MQ=255)
                            aGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGcgg                                                             >  1:335291/1‑91 (MQ=255)
                            aGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAg                                                             <  1:6174891/93‑1 (MQ=255)
                              aaCGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAggg                                                           >  1:2078892/1‑93 (MQ=255)
                               aCGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAggga                                                          >  2:5275621/1‑92 (MQ=255)
                               aCGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGc                                                          >  1:4002066/1‑93 (MQ=255)
                               aCGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGc                                                          <  1:2845318/93‑1 (MQ=255)
                                cGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCa                                                         <  1:2161408/93‑1 (MQ=255)
                                 ggTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCAt                                                        <  1:1986130/93‑1 (MQ=255)
                                 cgtgcAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCAt                                                        <  2:5400130/89‑1 (MQ=255)
                                    tCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCgg                                                     <  1:1655993/93‑1 (MQ=255)
                                    tCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCgg                                                     >  2:1380082/1‑93 (MQ=255)
                                      aGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGgtg                                                   >  1:4278321/1‑93 (MQ=255)
                                      aGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGgtg                                                   >  1:3945441/1‑93 (MQ=255)
                                         gcAATCAGCGTTTCTGCCAGCAGCAGCCCGCTCTCCCCGTTCTGATTCGGCATCTGCCAGGCGGCTTTCAGCAATGGCAGGGCATCGGTGTaa                                                <  1:1059077/93‑1 (MQ=255)
                                          cAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAAt                                               >  1:5793748/1‑93 (MQ=255)
                                          cAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAAt                                               <  1:6377761/93‑1 (MQ=255)
                                          cAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGGGTAAt                                               >  1:1201873/1‑93 (MQ=255)
                                           aaTCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAAtt                                              <  2:3613095/93‑1 (MQ=255)
                                           aaTCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAAtt                                              <  1:2499609/93‑1 (MQ=255)
                                           aaTCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAAtt                                              >  2:125575/1‑93 (MQ=255)
                                           aaTCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAAtt                                              <  1:6309718/93‑1 (MQ=255)
                                            aTCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTg                                             >  2:5926680/1‑93 (MQ=255)
                                            aTCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTg                                             <  1:5134243/93‑1 (MQ=255)
                                             tCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGc                                            >  2:1097436/1‑93 (MQ=255)
                                              cAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCt                                           <  1:4665573/93‑1 (MQ=255)
                                                gCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCttt                                         >  2:3910726/1‑93 (MQ=255)
                                                gCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCttt                                         >  1:662551/1‑93 (MQ=255)
                                                 cGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTc                                        <  2:876740/93‑1 (MQ=255)
                                                  gTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTcc                                       >  1:1452600/1‑93 (MQ=255)
                                                   tttCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCt                                      <  2:3850907/93‑1 (MQ=255)
                                                   tttCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCt                                      <  1:1780671/93‑1 (MQ=255)
                                                    ttCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTg                                     <  1:5987467/93‑1 (MQ=255)
                                                      cTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCa                                   <  2:5667435/93‑1 (MQ=255)
                                                          cagcagcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAg                               >  2:4940222/1‑93 (MQ=255)
                                                          cagcagcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAg                               <  1:3889173/93‑1 (MQ=255)
                                                           agcagcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGt                              <  2:3701803/93‑1 (MQ=255)
                                                           agcagcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGt                              <  2:6083687/93‑1 (MQ=255)
                                                            gcagcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGtt                             <  1:484193/93‑1 (MQ=255)
                                                            gcagcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGtt                             >  1:5528519/1‑93 (MQ=255)
                                                             cagcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTg                            >  2:667230/1‑93 (MQ=255)
                                                             cagcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTg                            <  2:2521954/93‑1 (MQ=255)
                                                              agcagGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGc                           <  2:3370284/93‑1 (MQ=255)
                                                                 atgCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATc                        <  2:6166741/91‑1 (MQ=255)
                                                                 agGCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATc                        >  1:18773/1‑93 (MQ=255)
                                                                  ggCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCg                       >  2:446348/1‑93 (MQ=255)
                                                                  ggCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCg                       >  2:5638774/1‑93 (MQ=255)
                                                                  ggCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCg                       >  1:2339903/1‑93 (MQ=255)
                                                                  ggCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCg                       <  2:4240481/93‑1 (MQ=255)
                                                                   gCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGc                      >  2:4509337/1‑93 (MQ=255)
                                                                   gCCGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGc                      >  1:5570194/1‑93 (MQ=255)
                                                                    ccGATCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGcc                     <  2:5773256/93‑1 (MQ=255)
                                                                    ccGATCTCCCCGTGCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGcc                     <  1:3104228/93‑1 (MQ=255)
                                                                       aTCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCctgc                  <  2:1076663/93‑1 (MQ=255)
                                                                       aTCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCctgc                  >  2:1950134/1‑93 (MQ=255)
                                                                       aTCTCCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCctgc                  >  2:296750/1‑93 (MQ=255)
                                                                        tctcCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCctgct                 >  1:3169294/1‑93 (MQ=255)
                                                                         ctcCCCGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCctgctg                >  2:1579613/1‑93 (MQ=255)
                                                                         ctacccGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCctgctg                <  2:5859690/90‑1 (MQ=255)
                                                                           ccccGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTgcg              >  1:975921/1‑93 (MQ=255)
                                                                            cccGTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTgcgc             >  1:2248756/1‑93 (MQ=255)
                                                                               gTTCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCttt          >  2:288904/1‑93 (MQ=255)
                                                                                ttCTGATTCGGCGACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTc         >  2:3466231/1‑93 (MQ=255)
                                                                                ttCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTc         <  2:5077738/93‑1 (MQ=255)
                                                                                ttCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTc         >  1:71727/1‑93 (MQ=255)
                                                                                 tCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCa        >  2:6319296/1‑93 (MQ=255)
                                                                                 tCTGATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCa        <  1:480073/93‑1 (MQ=255)
                                                                                    gATTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCAGct     <  2:1468250/93‑1 (MQ=255)
                                                                                     aTTCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCAGctc    <  2:3203774/93‑1 (MQ=255)
                                                                                      ttCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCAGctct   <  1:5662725/93‑1 (MQ=255)
                                                                                      ttCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCAGctct   <  2:2641469/93‑1 (MQ=255)
                                                                                       tCGGCAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCAGCtctt  <  2:4320450/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGGTTTTCAGCACCGCTTCCGCATCTTCAGAACGGTTCAGCGCAATCAGCGTTTCTGCCAGCAGCAGGCCGATCTCCCCGTTCTGATTCGACAACTGCCAGGCGTCTTTCAGCAATGGCAGGGCATCGGTGTAATTGCTTTCCTGCATCAGTTGCATCGCCTGCTGCGCTTTCAGCTCTT  >  NC_000913/516984‑517163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: