Tue Mar 17 11:13:33 2020

/usr/bin/breseq-0.33.1-Linux-x86_64/bin/breseq --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -p -j 1 -o breseq_processes/3 -r /var/data/Ref_Ecoli_W3110.gb /var/alemutpipe-outputs/good/DRR021344_R1.good.fq /var/alemutpipe-outputs/good/DRR021344_R2.good.fq