New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | BX571858 | 1 = | 0 (0.000) | 13 (0.990) | 12/170 | NT | 100% | intergenic (–/‑11) | –/pSAS01 | –/putative ABC transporter ATP binding protein |
? | BX571858 | = 20651 | 0 (0.000) | intergenic (+5/–) | pSAS24/– | putative exported protein/– |
TTCCTTTTTCAAAATTAAAGTTACATCCGTCTAAAATGTTTTTATTACCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < BX571858/93‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCATTTTAAAAAGCTAGGAATAT‑TTTTGTAATGTATTCTATCGAACGCACATATTTCCCTTTATGATTTACTTTCACATATTCTTTTGTAG < BX571858/20651‑20561 TTCCTTTTTCAAAATTAAAGTTACATCCGTCTAAAATGTTTTTATTACCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCAT > 1:26118/1‑97 TTCCTTTTTCAAAATTAAAGTTACATCCGTCTAAAATGTTTTTATTACCTTTTTTTAAAAAAACATTTTCAAGTTTTATAACTATCGGTCACCTCAT > 2:215585/1‑97 CTTTTTCAAAATTAAAGTTACATCCGTCTAAAATGTTTTTATTACCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCATTTT < 1:260350/97‑1 AAAATTAAAGTTACATCCGTCTAAAATGTTTTTATTACCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGC < 1:194818/97‑1 TTAAAGTTACATCCGTCTAAAATGTTTTTATTACCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGCTAGG < 1:270757/97‑1 CTAAAATGTTTTTATTACCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATG > 1:215448/1‑97 AAATGTTTTTATTACCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTAT < 1:87050/97‑1 TGTTTTTATTCCCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTATTCT < 2:335280/97‑1 TTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTATTCTATCGAACGCACAT < 2:8308/97‑1 ACAAAAACATTTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTATTCTATCGAACGCACATATTTCCC < 2:346342/97‑1 CATTTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTATTCTATCGAACGCACATATTTCCCTTTATGA < 1:364723/97‑1 CATTTTCAAGTTATAACACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCGTTTGTAATGTATTCTATCGAACGCACATATTTCCCTTTATGA < 1:124456/97‑1 TTTCAAGTTTTATCACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTATTCTATCGAACGCACATATTTCCCTTTATGATTT > 2:295215/1‑97 ATCACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTATTCTATCGAACGCACATATTTCCCTTTATGATTTACTTTCACATA > 2:102622/1‑97 ACTATCGGTCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTATTCTATCGAACGCACATATTTCCCTTTATGATTTACTTTCACATATTC > 1:181728/1‑97 TCACCTCATTTTAAAAAGCTAGGAATATCTTTTGTAATGTATTCTATCGAACGCACATATTTCCCTTTATGATTTACTTTCACATATTCTTTTGTAG < 2:354609/97‑1 TTCCTTTTTCAAAATTAAAGTTACATCCGTCTAAAATGTTTTTATTACCTTTTTTTACAAAAACATTTTCAAGTTTTATCACTATCGGTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < BX571858/93‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCATTTTAAAAAGCTAGGAATAT‑TTTTGTAATGTATTCTATCGAACGCACATATTTCCCTTTATGATTTACTTTCACATATTCTTTTGTAG < BX571858/20651‑20561 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |