New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | BX571858 | 1 = | 0 (0.000) | 13 (0.990) | 12/170 | NT | 100% | intergenic (–/‑11) | –/pSAS01 | –/putative ABC transporter ATP binding protein |
? | BX571858 | = 20651 | 0 (0.000) | intergenic (+5/–) | pSAS24/– | putative exported protein/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGAA > BX571858/1‑93 | ctacaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGa < 2:354609‑M1/5‑1 (MQ=255) gaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGt > 1:181728‑M1/85‑97 (MQ=255) tatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGAt > 2:102622‑M1/82‑97 (MQ=255) aaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGaaa > 2:295215‑M1/71‑97 (MQ=255) tcataaagggaaatatgtgcgttcgatagaatacattacaaacgatattcctagctttttaaaatgaGGTGACCGATAGTGTTATAACTTGAAAATg < 1:124456‑M1/30‑1 (MQ=255) tcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATg < 1:364723‑M1/30‑1 (MQ=255) gggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGt < 2:346342‑M1/37‑1 (MQ=255) atgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaaaaaa < 2:8308‑M1/44‑1 (MQ=255) agaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGGAATAAAAACa < 2:335280‑M1/57‑1 (MQ=255) atacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACAttt < 1:87050‑M1/60‑1 (MQ=255) cattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg > 1:215448‑M1/35‑97 (MQ=255) cctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTaa < 1:270757‑M1/79‑1 (MQ=255) gctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAAtttt < 1:194818‑M1/83‑1 (MQ=255) aaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAg < 1:260350‑M1/90‑1 (MQ=255) atgaGGTGACCGATAGTTATAAAACTTGAAAATGTTTTTTTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGaa > 2:215585‑M1/5‑97 (MQ=255) atgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGaa > 1:26118‑M1/5‑97 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGAA > BX571858/1‑93 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |