Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | BX571857 | 545,010 | G→A | 6.2% | intergenic (+413/+298) | unknown → / ← SAS0475 | –/GntR family regulatory protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | BX571857 | 545,010 | 0 | G | A | 6.2% | 546.1 / 15.3 | 153 | intergenic (+413/+298) | unknown/SAS0475 | –/GntR family regulatory protein |
Reads supporting (aligned to +/- strand): ref base G (53/89); new base A (4/7); total (57/96) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 163 total aligned reads displayed.
CTCTTTTTTTATGTCTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAAC > BX571857/544914‑545104 | tttttttATGTCTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAgcgc < 2:1520518/97‑1 (MQ=255) tttttttATGTCTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAgcgc < 2:1019279/97‑1 (MQ=255) tttttATGTCTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCaa > 2:1096447/1‑97 (MQ=255) tttATGTCTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACg < 1:218815/97‑1 (MQ=255) tATGTCTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAg < 1:2003939/97‑1 (MQ=255) gTCTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGttt < 1:1265175/97‑1 (MQ=255) cTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtag < 1:1354638/97‑1 (MQ=255) cTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtag > 1:920674/1‑97 (MQ=255) aaaCGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtagtag > 1:417248/1‑97 (MQ=255) aaaCGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtagtag < 1:1628878/97‑1 (MQ=255) aaaCGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGGTtagtag > 2:2127804/1‑97 (MQ=255) aaCGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGGTTAGTaga > 1:32069/1‑97 (MQ=255) gTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCt > 2:2072218/1‑97 (MQ=255) gTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCt > 1:641948/1‑97 (MQ=255) cAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTaa < 1:1065075/97‑1 (MQ=255) aaTAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATg > 1:423931/1‑97 (MQ=255) aTAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGa > 2:348323/1‑97 (MQ=255) aTAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGa > 2:299487/1‑97 (MQ=255) tAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAg < 1:1022575/97‑1 (MQ=255) aaaGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTa > 1:1010511/1‑97 (MQ=255) aGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAg > 2:424179/1‑97 (MQ=255) aGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAg > 2:476772/1‑97 (MQ=255) tAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGGGTTTAGTAGAGCTAAATGAGTAAGCga < 2:878104/97‑1 (MQ=255) aaCACAAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCga < 2:1448282/97‑1 (MQ=16) aaCAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCgag > 1:763011/1‑97 (MQ=40) aaCAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCgag < 1:2169403/97‑1 (MQ=40) acac‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCgaga < 2:1363762/97‑1 (MQ=39) cac‑aAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGagag > 2:1004994/1‑97 (MQ=40) c‑aAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGcc > 2:270450/1‑97 (MQ=40) aggAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCga < 2:1061502/95‑1 (MQ=21) aGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaa < 2:60323/97‑1 (MQ=35) aGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaa < 2:198559/97‑1 (MQ=35) aaaaTGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaaga < 2:2031353/97‑1 (MQ=34) aaaaTGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAAAGAGTTTAGTAGAGCTAAATGAGAAAGCGAGAGCCgaaga > 2:1565427/1‑97 (MQ=255) aaaTGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaagaa < 1:1843847/97‑1 (MQ=35) aaaTGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaagaa > 1:1814775/1‑97 (MQ=37) aaTGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGaaa < 2:1712226/97‑1 (MQ=38) tGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAAt < 2:1560816/97‑1 (MQ=39) ggCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGaaaagg > 2:726488/1‑95 (MQ=1) ggCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGGGAAAAGCGCGCCACGAGGTTAGTAGAGCGAAATGAGTAAGCGCGAGCCGAAGAAAATg > 2:789607/1‑97 (MQ=14) gCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGa > 2:1263639/1‑97 (MQ=18) cTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGAt < 1:1089777/97‑1 (MQ=255) ttGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATa < 1:895969/97‑1 (MQ=255) ttGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATa > 1:580539/1‑97 (MQ=255) ttGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATa < 1:295357/97‑1 (MQ=255) gACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAAt > 1:2132923/1‑97 (MQ=255) aCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAAtt < 2:1296241/97‑1 (MQ=255) cGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAAttt < 2:1138693/97‑1 (MQ=255) gAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTta > 2:1537290/1‑97 (MQ=255) gAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTta > 2:257323/1‑97 (MQ=255) aaGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTtaa < 2:624444/97‑1 (MQ=255) aGTGAAAACGTTTGAATCTGGCCAAACGAGAAACGAGCGCCTCGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTtaat < 2:95075/97‑1 (MQ=17) aGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTtaat < 1:1484351/97‑1 (MQ=255) gTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTtaata > 1:1649666/1‑97 (MQ=255) gTGAAAACGGTTGAATCTGCCGAAACGAGAAAAGAGCGCAACGAGATTAGTAGAGCTAAATGAGTAAGCGAGAGACGAAGAAAATGAtaatataata > 2:372781/1‑97 (MQ=14) tGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTtaataa < 2:1499579/97‑1 (MQ=255) gAAAACGTTTGAATCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGa < 2:554122/85‑1 (MQ=255) aaCGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTa > 2:1833288/1‑97 (MQ=255) aCGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTac < 2:1923214/97‑1 (MQ=255) aCGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTac > 2:1526736/1‑97 (MQ=255) cGTTTGAATCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTaca < 2:1473151/97‑1 (MQ=255) gTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTacac < 2:1751420/97‑1 (MQ=255) gTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTacac < 2:604828/97‑1 (MQ=255) gTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTacac < 2:550414/97‑1 (MQ=255) gTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTacac < 1:641268/97‑1 (MQ=255) tttGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACt < 1:1059571/97‑1 (MQ=255) tttGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACt < 1:530913/97‑1 (MQ=255) tttGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACt < 1:1341068/97‑1 (MQ=255) ttGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACtt < 2:2176655/97‑1 (MQ=255) ttGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACtt < 2:105797/97‑1 (MQ=255) tGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACttt > 1:518567/1‑97 (MQ=255) gAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTc < 1:1398972/97‑1 (MQ=255) gaTCTGACGGAACGAGAAAGGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAGAATGATAATTTAATAATGTACACTTTCg < 2:207272/96‑1 (MQ=18) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCg < 1:859573/97‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCg < 2:168677/97‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCg < 2:75640/97‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCg < 2:168779/97‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCg < 1:964720/97‑1 (MQ=255) aTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGa < 1:1742453/97‑1 (MQ=255) aTCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGa < 1:1230943/97‑1 (MQ=255) tCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGAt < 2:385126/97‑1 (MQ=255) cTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGAtt > 1:1798706/1‑97 (MQ=255) tGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaagaa < 1:1975511/65‑1 (MQ=33) tGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTg > 1:881443/1‑97 (MQ=255) tGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTg < 1:682330/97‑1 (MQ=255) tGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaagaa > 2:1975511/1‑65 (MQ=16) gAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTa < 2:1483033/97‑1 (MQ=255) aaCGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAg < 1:1401623/97‑1 (MQ=255) aCGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgt > 2:1820248/1‑97 (MQ=255) agaAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatg < 2:1753779/97‑1 (MQ=255) agaAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatg < 1:1920700/97‑1 (MQ=255) agaAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatg < 1:44178/97‑1 (MQ=255) gaAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatgt < 2:1219505/97‑1 (MQ=255) aaaaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatgta > 1:1777806/1‑97 (MQ=255) aaaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatgtat < 2:87577/97‑1 (MQ=255) aaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGtata < 2:426290/97‑1 (MQ=255) aaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGtata < 1:501926/97‑1 (MQ=255) aaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCATAAGAAGATGATAATTTAATAGTGTACACTTTCGATTGTCTAAGTATGtata < 1:1085996/97‑1 (MQ=25) gagCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAAc < 2:423069/97‑1 (MQ=255) gagCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAAc < 2:1258778/97‑1 (MQ=255) | CTCTTTTTTTATGTCTAAAACGTCAAAATAAAAGTTAACAC‑AAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAAC > BX571857/544914‑545104 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |