New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BX571857 601531 =243 (1.100)45 (0.220) 3/164 NT 16.4% coding (3886/4098 nt) SAS0520 putative surface anchored protein
?BX571857 = 604941 NA (NA)coding (2805/3426 nt) SAS0521 bone sialoprotein‑binding protein

Only 100 of 332 total aligned reads displayed.

ATGATAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACTCAGAAA  >  BX571857/604850‑605038
                                                                                           |                                                                                                 
atgatAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGAc                                                                                             <  2:1972344/98‑1 (MQ=31)
atgatAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGAc                                                                                             >  1:708961/1‑98 (MQ=31)
 tgatAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACa                                                                                            <  2:1800162/98‑1 (MQ=32)
 tgatAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACa                                                                                            >  2:1741438/1‑98 (MQ=32)
 tgatAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACa                                                                                            >  1:2596190/1‑98 (MQ=32)
  gatAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAg                                                                                           >  1:1040906/1‑98 (MQ=33)
  gatAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAg                                                                                           >  2:737514/1‑98 (MQ=33)
  gatAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAg                                                                                           <  2:3524239/98‑1 (MQ=33)
   atAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGt                                                                                          <  2:1581194/98‑1 (MQ=34)
   atAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGt                                                                                          <  1:1472321/98‑1 (MQ=34)
    tAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTg                                                                                         <  1:2954536/98‑1 (MQ=35)
     aaaGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGa                                                                                        <  2:2438218/98‑1 (MQ=37)
     aaaGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGa                                                                                        <  2:781020/98‑1 (MQ=37)
      aggATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGAt                                                                                       <  2:82668/96‑1 (MQ=38)
      aaGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGAt                                                                                       <  1:3010063/98‑1 (MQ=38)
       aGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGCCCCTGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGAtt                                                                                      >  2:679880/1‑98 (MQ=255)
       aGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACCTCGAAGAAGATACATCAGACAGGGAtt                                                                                      >  2:30263/1‑98 (MQ=255)
        gATGCAGATGGTGGCGCAGTTGACGTAACAATTACGGATCATGATGATGTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtc                                                                                     <  2:561072/98‑1 (MQ=255)
        gATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtc                                                                                     >  1:1011733/1‑98 (MQ=40)
          tGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcag                                                                                   <  2:3248852/98‑1 (MQ=255)
           gCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcaga                                                                                  <  1:2320832/98‑1 (MQ=255)
           gCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcaga                                                                                  >  1:912789/1‑98 (MQ=255)
            cAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcagac                                                                                 <  1:1104822/98‑1 (MQ=255)
             aGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcagact                                                                                <  1:490150/98‑1 (MQ=255)
                tggtggCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcagactcag                                                                             <  2:1962599/98‑1 (MQ=255)
                tggtggCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcagactcag                                                                             <  1:3496894/98‑1 (MQ=255)
                 ggtggCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGCTAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcagactcaga                                                                            >  2:2178917/1‑98 (MQ=255)
                 ggtggCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATtcagactcaga                                                                            >  1:790140/1‑98 (MQ=255)
                   tggCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACa                                                                          <  1:3287030/98‑1 (MQ=255)
                     gCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGc                                                                        <  2:3302739/98‑1 (MQ=255)
                      cGAAGTTGACGTAACAATTACGGATCGTGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCg                                                                       <  2:1295622/98‑1 (MQ=255)
                       gAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGa                                                                      <  2:2886712/98‑1 (MQ=255)
                        aaGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGAt                                                                     >  2:3230360/1‑98 (MQ=255)
                         aGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGAtt                                                                    <  2:461260/98‑1 (MQ=255)
                              ccGTAACAATTACGGATCATGATGATTTCACACCTGATAACGGATACTTCGAAGAAGATACATCAGACCGTGATTCAGACTCAGACAGCGATTCAGAc                                                               <  2:3591225/97‑1 (MQ=255)
                                gTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTc                                                             <  2:2355279/98‑1 (MQ=255)
                                gTAACAATTACGGATCATGATGATTTCACACTTAATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTc                                                             >  2:3003686/1‑98 (MQ=255)
                                    cAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGAt                                                         >  1:454618/1‑98 (MQ=255)
                                    cAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGAt                                                         <  2:1895265/98‑1 (MQ=255)
                                     aaTTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATa                                                        <  2:2726975/98‑1 (MQ=255)
                                        tACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCg                                                     <  2:2615840/98‑1 (MQ=255)
                                         aCGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGa                                                    >  2:1112668/1‑98 (MQ=255)
                                           ggATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACt                                                  >  2:2214136/1‑98 (MQ=255)
                                           ggATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACt                                                  >  1:2157268/1‑98 (MQ=255)
                                            gATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTc                                                 <  1:3442770/98‑1 (MQ=255)
                                            gATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTc                                                 <  2:711208/98‑1 (MQ=255)
                                            gATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTc                                                 >  1:1803010/1‑98 (MQ=255)
                                            gATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTc                                                 >  1:367346/1‑98 (MQ=255)
                                            gATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTc                                                 >  1:2488650/1‑98 (MQ=255)
                                            gATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACACAGATAGCGACTc                                                 >  1:242815/1‑98 (MQ=255)
                                             aTCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCa                                                <  1:3311484/98‑1 (MQ=255)
                                             aTCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCa                                                >  2:2117974/1‑98 (MQ=255)
                                             aTCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAACGACCCa                                                >  2:3159089/1‑98 (MQ=255)
                                              tCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAg                                               >  1:1137429/1‑98 (MQ=255)
                                               cATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGa                                              <  1:2802947/98‑1 (MQ=255)
                                               cATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGa                                              >  1:2709119/1‑98 (MQ=255)
                                                atgatgATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGAt                                             <  2:869092/98‑1 (MQ=255)
                                                atgatgATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGAt                                             <  2:3364724/98‑1 (MQ=255)
                                                atgatgATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGAt                                             <  2:2308928/98‑1 (MQ=255)
                                                    tgatTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAg                                         <  2:3438290/98‑1 (MQ=255)
                                                    tgatTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAg                                         >  2:1073532/1‑98 (MQ=255)
                                                    tgatTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAg                                         >  1:1862956/1‑98 (MQ=255)
                                                     gatTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGa                                        <  1:1748290/98‑1 (MQ=255)
                                                      atTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGAc                                       <  1:1310499/98‑1 (MQ=255)
                                                       tttCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGATTCAGATAGCGactcagactcag                                         >  1:179109/1‑95 (MQ=255)
                                                       tttCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACa                                      >  2:932863/1‑98 (MQ=255)
                                                        ttCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAg                                     >  1:1565093/1‑98 (MQ=255)
                                                        ttCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAg                                     >  1:1696243/1‑98 (MQ=255)
                                                         tCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGt                                    >  1:505865/1‑98 (MQ=255)
                                                            cacTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTgac                                 >  1:2057052/1‑98 (MQ=255)
                                                                tGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTgactcag                             <  2:2399849/98‑1 (MQ=255)
                                                                tGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTgactcag                             <  1:979252/98‑1 (MQ=255)
                                                                 gATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCgactcaga                            >  1:2013787/1‑98 (MQ=255)
                                                                  aTAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTgactcagac                           <  2:1473394/98‑1 (MQ=255)
                                                                   tAACGTATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTgactcagact                          <  2:37004/98‑1 (MQ=255)
                                                                   tAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTgactcagact                          <  2:1688392/98‑1 (MQ=255)
                                                                   tAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTgactcagact                          >  1:1935536/1‑98 (MQ=255)
                                                                   tAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTgactcagact                          <  1:419009/98‑1 (MQ=255)
                                                                      cGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGactcagactcag                       >  1:1656582/1‑98 (MQ=255)
                                                                      cGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGactcagactcag                       <  1:2632324/98‑1 (MQ=255)
                                                                        gATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGAt                     <  1:1202722/98‑1 (MQ=255)
                                                                          tACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAg                   <  2:1614684/98‑1 (MQ=255)
                                                                            cTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCg                 <  2:393083/98‑1 (MQ=255)
                                                                             ttCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGa                <  2:2802098/98‑1 (MQ=255)
                                                                             ttCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGa                <  2:601227/98‑1 (MQ=255)
                                                                                  agaagaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAg           <  1:3095196/98‑1 (MQ=255)
                                                                                  agaagaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAg           >  2:251716/1‑98 (MQ=255)
                                                                                    aagaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGAc         <  1:2251770/98‑1 (MQ=255)
                                                                                    aagaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGAc         <  1:944619/98‑1 (MQ=255)
                                                                                     agaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACt        >  1:2929198/1‑98 (MQ=255)
                                                                                     agaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACt        >  1:1494476/1‑98 (MQ=255)
                                                                                     agaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACt        >  2:248878/1‑98 (MQ=255)
                                                                                     agaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACt        <  2:3073749/98‑1 (MQ=255)
                                                                                      gaTACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGTGATTCAGACTCAGATAGCGATTCGGACTc       >  1:2162812/1‑98 (MQ=17)
                                                                                         aCATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGActcagactcaga    >  1:604453/1‑98 (MQ=255)
                                                                                         aCATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACTCAGa    >  2:2921475/1‑98 (MQ=255)
                                                                                         aCATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACTCAGa    >  1:3366004/1‑98 (MQ=255)
                                                                                          cATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACTCAGaa   >  1:2096584/1‑98 (MQ=255)
                                                                                          cATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACTCAGaa   >  1:1395906/1‑98 (MQ=255)
                                                                                           aTCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACTCAGaaa  <  1:2275634/98‑1 (MQ=255)
                                                                                           |                                                                                                 
ATGATAAAGATGCAGATGGTGGCGAAGTTGACGTAACAATTACGGATCATGATGATTTCACACTTGATAACGGATACTTCGAAGAAGATACATCAGACAGTGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGATTCAGACTCAGAAA  >  BX571857/604850‑605038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.