New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BX571858 1 =0 (0.000)220 (1.130) 111/170 NT 100% intergenic (–/‑11) –/pSAS01 –/putative ABC transporter ATP binding protein
?BX571858 = 20651 0 (0.000)intergenic (+5/–) pSAS24/– putative exported protein/–

Only 100 of 249 total aligned reads displayed.

TGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAATATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G  >  BX571858/20556‑20652
                                                                                                |                                                                                               
 gATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAg                                                                                                >  1:1063013‑M2/1‑96 (MQ=255)
 gATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAg                                                                                                <  1:1320138‑M2/97‑2 (MQ=255)
  aTCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAgg                                                                                               <  2:876467‑M2/97‑3 (MQ=255)
   tCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggt                                                                                              >  1:234835‑M2/1‑94 (MQ=255)
   tCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggt                                                                                              >  1:714763‑M2/1‑94 (MQ=255)
    ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtg                                                                                             >  2:1927995‑M2/1‑93 (MQ=255)
    ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtg                                                                                             >  1:1725784‑M2/1‑93 (MQ=255)
       aCAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgacc                                                                                          <  1:1466716‑M2/97‑8 (MQ=255)
        cAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccg                                                                                         <  1:358349‑M2/97‑9 (MQ=255)
         aaaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccga                                                                                        >  1:1845622‑M2/1‑88 (MQ=255)
          aaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgat                                                                                       <  2:2064134‑M2/97‑11 (MQ=255)
           aaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgata                                                                                      <  2:448805‑M2/97‑12 (MQ=255)
            aGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatag                                                                                     <  2:808914‑M2/97‑13 (MQ=255)
            aGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATGACAAAAGATACCGCTAGCTTTTTAAAATGAggtgaccgatag                                                                                     <  2:1145639‑M2/97‑13 (MQ=255)
             gAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagg                                                                                    <  2:429176‑M2/97‑14 (MQ=255)
              aaTATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGGATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtg                                                                                   <  2:1978140‑M2/97‑15 (MQ=255)
              aaTATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtg                                                                                   >  2:758032‑M2/1‑83 (MQ=255)
               atatGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtga                                                                                  >  2:1497563‑M2/1‑82 (MQ=255)
               atatGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtga                                                                                  <  1:1831605‑M2/97‑16 (MQ=255)
                  tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataa                                                                               <  2:837322‑M2/97‑19 (MQ=255)
                  tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataa                                                                               <  1:3274‑M2/97‑19 (MQ=255)
                   gtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaa                                                                              >  2:1247988‑M2/1‑78 (MQ=255)
                    tgAAAGTAAATCATAAAGTGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa                                                                             >  2:1151454‑M2/1‑77 (MQ=255)
                    tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa                                                                             >  2:826683‑M2/1‑77 (MQ=255)
                    tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa                                                                             <  1:291863‑M2/97‑21 (MQ=255)
                    tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa                                                                             <  1:1670053‑M2/97‑21 (MQ=255)
                    tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa                                                                             >  1:103372‑M2/1‑77 (MQ=255)
                      aaaGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaact                                                                           <  2:1633311‑M2/97‑23 (MQ=255)
                          tAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaa                                                                       >  2:2266303‑M2/1‑71 (MQ=255)
                           aaaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaa                                                                      <  2:2185425‑M2/97‑28 (MQ=255)
                            aaTCATAAAGGGAAGTATGTGCGTTCGATAGAATACATTGCAAAAGATATGCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaa                                                                     <  2:2351230‑M2/97‑29 (MQ=255)
                              tCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg                                                                   <  2:2416881‑M2/97‑31 (MQ=255)
                               cATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgt                                                                  <  2:1374166‑M2/97‑32 (MQ=255)
                               cATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgt                                                                  >  1:2431033‑M2/1‑66 (MQ=255)
                                aTAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt                                                                 >  2:1922587‑M2/1‑65 (MQ=255)
                                aTAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt                                                                 >  1:425603‑M2/1‑65 (MQ=255)
                                aTAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt                                                                 <  2:2021393‑M2/97‑33 (MQ=255)
                                 tAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttt                                                                >  2:2042207‑M2/1‑64 (MQ=255)
                                  aaaGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCGAGCTTTTTAAAATGAggtgaccgattgtgagaaaaagtgaaaatggatt                                                               <  1:606596‑M2/97‑35 (MQ=255)
                                   aaGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttttt                                                              <  1:473569‑M2/97‑36 (MQ=255)
                                     gggAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt                                                            <  1:990908‑M2/97‑38 (MQ=255)
                                        aaaTATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaa                                                         <  2:213404‑M2/97‑41 (MQ=255)
                                        aaaTATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaa                                                         <  1:64386‑M2/97‑41 (MQ=255)
                                           tatGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa                                                      <  2:1231626‑M2/97‑44 (MQ=255)
                                           tatGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa                                                      <  1:2163149‑M2/97‑44 (MQ=255)
                                            atGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAGATGAggtgaccgatagtgataacacttgaaaatgtttttgtaaaaaaa                                                     <  2:1778244‑M2/97‑45 (MQ=255)
                                            atGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaa                                                     <  2:591320‑M2/97‑45 (MQ=255)
                                             tgtgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaag                                                    <  1:2401727‑M2/97‑46 (MQ=255)
                                             tgtgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaag                                                    <  2:1028697‑M2/97‑46 (MQ=255)
                                               tgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt                                                  <  1:1127363‑M2/97‑48 (MQ=255)
                                               tgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt                                                  <  1:35495‑M2/97‑48 (MQ=255)
                                               tgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt                                                  >  2:2227098‑M2/1‑50 (MQ=255)
                                               tgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt                                                  >  1:1231445‑M2/1‑50 (MQ=255)
                                                 cGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaa                                                >  1:1290908‑M2/1‑48 (MQ=255)
                                                        tAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaac                                         <  2:134496‑M2/97‑57 (MQ=255)
                                                         aGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca                                        <  2:651881‑M2/97‑58 (MQ=255)
                                                          gAATACATTACAAAAGATATTCCTAGTTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat                                       >  2:1435600‑M2/1‑39 (MQ=255)
                                                          gAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat                                       <  2:51968‑M2/97‑59 (MQ=255)
                                                          gAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat                                       <  1:2224217‑M2/97‑59 (MQ=255)
                                                          gAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat                                       <  2:1276433‑M2/97‑59 (MQ=255)
                                                          gAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat                                       <  1:1384979‑M2/97‑59 (MQ=255)
                                                           aaTACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatt                                      >  2:1314448‑M2/1‑38 (MQ=255)
                                                            aTACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattt                                     <  1:392424‑M2/97‑61 (MQ=255)
                                                            aTACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattt                                     <  2:498308‑M2/97‑61 (MQ=255)
                                                            aTACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattt                                     >  2:1864585‑M2/1‑37 (MQ=255)
                                                             tACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttt                                    <  2:845047‑M2/97‑62 (MQ=255)
                                                              aCATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta                                   >  1:1035313‑M2/1‑35 (MQ=255)
                                                              aCATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtatttgtaaaaaaaggtaataaaaacatttta                                   <  1:2426306‑M2/97‑63 (MQ=255)
                                                               cATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttag                                  <  2:1077080‑M2/97‑64 (MQ=255)
                                                               cATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttag                                  <  2:2076681‑M2/97‑64 (MQ=255)
                                                                aTTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaacatggttttgtaaaaaaaggcaataaaaacattttagc                                 <  2:702756‑M2/97‑65 (MQ=255)
                                                                  tACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacg                               >  1:854557‑M2/1‑31 (MQ=255)
                                                                  tACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacg                               >  2:1686020‑M2/1‑31 (MQ=255)
                                                                  tACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacg                               >  2:1282462‑M2/1‑31 (MQ=255)
                                                                   aCAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgg                              <  1:2111683‑M2/97‑68 (MQ=255)
                                                                   aCAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgg                              >  2:2152116‑M2/1‑30 (MQ=255)
                                                                     aaagaTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatg                           <  1:525831‑M2/97‑71 (MQ=255)
                                                                     aaagaTATTCCTAGCTTATTAAAATGAggtgaccaatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatg                           >  2:1831430‑M2/1‑27 (MQ=255)
                                                                      aagaTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgt                          >  2:320056‑M2/1‑26 (MQ=255)
                                                                       aagatattccTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgt                          >  1:2013485‑M2/4‑26 (MQ=255)
                                                                        agatattcCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgta                         <  1:1143465‑M2/95‑73 (MQ=255)
                                                                        agatattcCTAGCTTTTTAAAATGAggggaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgta                         >  2:543609‑M2/3‑25 (MQ=255)
                                                                         gatattCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaa                        >  1:281319‑M2/2‑24 (MQ=255)
                                                                            atTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactt                     <  1:1702467‑M2/97‑77 (MQ=255)
                                                                             ttCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaacttt                    <  1:746983‑M2/97‑78 (MQ=255)
                                                                             ttCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaacttt                    <  2:1452437‑M2/97‑78 (MQ=255)
                                                                               ccTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttca                  <  1:1780241‑M2/97‑80 (MQ=255)
                                                                               ccTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaa                  <  1:2049246‑M2/97‑80 (MQ=255)
                                                                                 tAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaatt                >  2:1754959‑M2/1‑16 (MQ=255)
                                                                                   gCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaatttt              <  1:1396856‑M2/97‑84 (MQ=255)
                                                                                       tttAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaa          <  1:921238‑M2/97‑88 (MQ=255)
                                                                                       tttAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaa          >  1:1642360‑M2/1‑10 (MQ=255)
                                                                                        ttAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaaa         >  2:1188446‑M2/1‑9 (MQ=255)
                                                                                          aaaaTGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaaaag       >  2:270269‑M2/1‑7 (MQ=255)
                                                                                            aaTGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaaaagga     >  1:1900773‑M2/1‑5 (MQ=255)
                                                                                             aTGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaaaaggaa    <  1:1221389‑M2/97‑94 (MQ=255)
                                                                                             aTGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaaaaggaa    <  1:1561925‑M2/97‑94 (MQ=255)
                                                                                              tGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaaaaggaaa   >  2:2370448‑M2/1‑3 (MQ=255)
                                                                                              tGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaaaaggaaa   <  2:2228840‑M2/97‑95 (MQ=255)
                                                                                               gAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgtaactttaattttgaaaaaggaaaa  >  1:2226889‑M2/1‑2 (MQ=255)
                                                                                                |                                                                                               
TGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAATATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G  >  BX571858/20556‑20652

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.