New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BX571857 = 165482NA (NA)126 (0.570) 7/136 NT 33.8% coding (47/267 nt) SAS0144 hypothetical protein
?BX571857 = 273445 313 (1.120)coding (57/135 nt) SAS0230 hypothetical protein

Only 100 of 431 total aligned reads displayed.

TGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTcaggggccccaacacaga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  BX571857/165387‑165482
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTATTTATAGAA  <  BX571857/273445‑273332
                                                                                                                                                                                                                  
TGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTC                                                                                                                   >  1:4646320/1‑97
TGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTC                                                                                                                   >  1:3251923/1‑97
TGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTC                                                                                                                   <  1:2988972/97‑1
TGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTC                                                                                                                   <  1:3764462/97‑1
TGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTC                                                                                                                   <  1:646636/97‑1
 GGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCA                                                                                                                  <  1:508436/97‑1
 GGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCA                                                                                                                  >  2:3711737/1‑97
 GGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCA                                                                                                                  <  2:3041281/97‑1
 GGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCA                                                                                                                  >  1:174824/1‑97
  GGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAG                                                                                                                 <  1:2422561/97‑1
  GGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAG                                                                                                                 <  2:4632864/97‑1
   GACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGG                                                                                                                >  1:3499459/1‑97
    ACATAAATCAATGTTCTATGCTCTACGACGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGG                                                                                                               <  1:1448917/97‑1
    ACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGG                                                                                                               <  1:1428829/97‑1
    ACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGG                                                                                                               <  2:321372/97‑1
     CATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGG                                                                                                              >  1:729087/1‑97
      ATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAACTGCGCTTGTAACACGCTTTTTTCAATTCTAGTCAGGGGC                                                                                                             >  2:4563231/1‑97
      ATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGC                                                                                                             >  1:1559117/1‑97
      ATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGC                                                                                                             >  2:1821025/1‑97
       TAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCC                                                                                                            <  1:951236/97‑1
        AAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCC                                                                                                           >  1:3054937/1‑97
         AATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCC                                                                                                          <  2:4421416/97‑1
         AATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCC                                                                                                          >  1:1242408/1‑97
          ATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCA                                                                                                         >  2:2482234/1‑97
           TCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAA                                                                                                        <  1:4183623/97‑1
           TCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAA                                                                                                        <  1:598660/97‑1
           TCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAA                                                                                                        >  2:1283570/1‑97
           TCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAA                                                                                                        >  2:3554926/1‑97
           TCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAA                                                                                                        <  2:698582/97‑1
           TCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAA                                                                                                        >  1:1501806/1‑97
            CAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAAC                                                                                                       <  2:1608225/97‑1
            CAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGCCAGGGGCCCCAAC                                                                                                       >  2:3877062/1‑97
             AATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACA                                                                                                      >  2:4497677/1‑97
             AATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACA                                                                                                      >  2:124046/1‑97
             AATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACA                                                                                                      <  1:2194920/97‑1
             AATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACA                                                                                                      <  2:382010/97‑1
              ATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACAC                                                                                                     <  2:344320/97‑1
               TGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACA                                                                                                    <  1:868364/97‑1
                tcTCTATGCTCTACTAAGTGATTTTGGCAGTAGTTGACTTATCGAAAAACCGCTTGTAACACGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAG                                                                                                   <  2:1513021/95‑1
                 TTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGA                                                                                                  <  2:3612168/97‑1
                   CTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAG                                                                                                <  2:3154251/97‑1
                    TATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGC                                                                                               >  1:2090247/1‑97
                    TATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGC                                                                                               >  2:1087027/1‑97
                     ATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCT                                                                                              <  1:4298566/97‑1
                      TGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTG                                                                                             >  2:1389678/1‑97
                      TGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTG                                                                                             >  1:4017411/1‑97
                      TGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTG                                                                                             >  2:566057/1‑97
                        CTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGAC                                                                                           >  1:3841309/1‑97
                           TACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTCGTCAGGGGCCCCAACACAGAAGCTGACGAA                                                                                        >  2:1862672/1‑97
                               AAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGT                                                                                    >  2:1136973/1‑97
                                AGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTC                                                                                   <  2:1482044/97‑1
                                 GTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCA                                                                                  >  1:4523592/1‑97
                                 GTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCA                                                                                  >  2:3302651/1‑97
                                 GTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCA                                                                                  >  1:1955991/1‑97
                                   TATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGC                                                                                >  1:4462440/1‑97
                                   TATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGC                                                                                >  1:1134499/1‑97
                                    ATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCT                                                                               >  1:1365832/1‑97
                                      ATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTA                                                                             <  1:1034740/97‑1
                                       TTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTAC                                                                            <  1:545117/97‑1
                                        TGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACA                                                                           <  1:845125/97‑1
                                        TGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACA                                                                           >  1:2479071/1‑97
                                        TGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACA                                                                           <  1:2584713/97‑1
                                            AGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCACCACAGACGCTGACGAAAAGTCCGCTTCCAATAA                                                                       >  2:4380574/1‑97
                                            AGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAA                                                                       >  1:4637495/1‑97
                                            AGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAA                                                                       >  1:1837479/1‑97
                                            AGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAA                                                                       <  1:2562589/97‑1
                                              TAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATG                                                                     >  1:4429820/1‑97
                                               AGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGT                                                                    >  2:1039230/1‑97
                                                 TTGACTGAACGAAAATGCGCTTGTAACAAGCGTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGC                                                                  <  2:1959838/97‑1
                                                      TGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT                                                             >  2:3950735/1‑97
                                                      TGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT                                                             <  1:2714651/97‑1
                                                      TGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT                                                             <  2:1321818/97‑1
                                                       GAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTG                                                            >  1:3396427/1‑97
                                                       GAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTG                                                            >  1:4089958/1‑97
                                                        AACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGG                                                           >  1:4241082/1‑97
                                                         ACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGG                                                          <  2:254417/97‑1
                                                                             AGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGAGGCTGAGACGGCAACCTA                                      >  2:2870414/1‑97
                                                                               CTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGG                                    >  2:2049328/1‑97
                                                                                         TTCTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGCCAACATAGGAAGGGACCCG                          >  2:2324365/1‑97
                                                                                           CTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAG                                     >  2:3378279/1‑84
                                                                                           CTAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAG                                     <  1:3378279/84‑1
                                                                                            TAGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCA                       >  2:2413041/1‑97
                                                                                             AGTCAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCAT                      <  2:214436/97‑1
                                                                                                CAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAA                   <  1:4062312/97‑1
                                                                                                 AGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAA                  <  1:1195646/97‑1
                                                                                                  GGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAA                 <  1:4332922/97‑1
                                                                                                  GGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAA                 >  1:1353729/1‑97
                                                                                                   GGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAA                >  2:886626/1‑97
                                                                                                    GGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAAT               >  1:3559326/1‑97
                                                                                                    GGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCGGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAAT               <  2:772414/97‑1
                                                                                                     GCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATT              >  2:2648259/1‑97
                                                                                                     GCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATT              >  2:626215/1‑97
                                                                                                       CCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCT            >  2:4185098/1‑97
                                                                                                        CCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTA           <  2:4300563/97‑1
                                                                                                        CCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTA           <  1:2323256/97‑1
                                                                                                        CCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTA           <  1:1669823/97‑1
                                                                                                          AACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTATT         <  1:199349/97‑1
                                                                                                              CAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTATTTATA     <  1:3692587/97‑1
                                                                                                               AGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTATTTATAG    <  2:2679812/97‑1
                                                                                                                 AAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTATTTATAGAA  <  2:4059096/97‑1
                                                                                                                                                                                                                  
TGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTcaggggccccaacacaga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  BX571857/165387‑165482
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGCTGAGACGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTATTTATAGAA  <  BX571857/273445‑273332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.