Predicted mutation
evidence seq id position mutation freq annotation gene description
RA BX571857 1,868,342 G→A 100% G129D (GGT→GAT)  SAS1720 → putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*BX5718571,868,3420GA100.0% 1114.4 / NA 247G129D (GGT→GAT) SAS1720putative membrane protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (121/126);  total (121/126)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 247 total aligned reads displayed.

CAGTTGAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGGTAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTCTGCTAA  >  BX571857/1868249‑1868435
                                                                                             |                                                                                             
 aGTTGAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATaaa                                                                                           >  1:2480723/1‑97 (MQ=255)
   ttGAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAaaga                                                                                         <  2:3659572/97‑1 (MQ=255)
    tGAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAaagaa                                                                                        >  1:1905513/1‑97 (MQ=255)
    tGAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAaagaa                                                                                        >  2:3602332/1‑97 (MQ=255)
     gAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAaagaag                                                                                       <  1:732463/97‑1 (MQ=255)
     gAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAaagaag                                                                                       <  1:1433624/97‑1 (MQ=255)
     gAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAaagaag                                                                                       <  1:2014057/97‑1 (MQ=255)
     gAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAaagaag                                                                                       <  1:3951243/97‑1 (MQ=255)
        aCTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGt                                                                                    >  1:1256171/1‑97 (MQ=255)
        aCTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGt                                                                                    <  2:4389030/97‑1 (MQ=255)
         cTATGAAATCAGTTGGTCCATCTATCGCGCCAACAACTGCTAAAGGTACATTTGTCGTTGCTGCTGTGACGAGTAAAAACAACGATAAAGAAGCGtg                                                                                   >  2:4555573/1‑96 (MQ=255)
         cTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGtt                                                                                   <  1:3722711/97‑1 (MQ=255)
         cTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGtt                                                                                   >  2:3649780/1‑97 (MQ=255)
          tATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTa                                                                                  <  2:662862/97‑1 (MQ=255)
           aTGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTaa                                                                                 >  1:691913/1‑97 (MQ=255)
            tGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATGTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAAc                                                                                <  1:403266/97‑1 (MQ=255)
             gAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACa                                                                               <  1:729318/97‑1 (MQ=255)
              aaaTCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACaa                                                                              >  1:3323472/1‑97 (MQ=255)
              aaaTCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACaa                                                                              <  1:2015118/97‑1 (MQ=255)
              aaaTCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACaa                                                                              <  2:1042508/97‑1 (MQ=255)
                aTCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAAtt                                                                            <  1:3505803/97‑1 (MQ=255)
                 tCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTg                                                                           <  1:2042709/97‑1 (MQ=255)
                  cAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGa                                                                          >  2:1786164/1‑97 (MQ=255)
                  cAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGa                                                                          <  2:1997891/97‑1 (MQ=255)
                  cAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGa                                                                          >  2:2703854/1‑97 (MQ=255)
                  cAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGa                                                                          >  2:4329520/1‑97 (MQ=255)
                    gTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATa                                                                        <  2:2914289/97‑1 (MQ=255)
                     ttGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAg                                                                       >  1:596747/1‑97 (MQ=255)
                      tGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGt                                                                      >  1:1617950/1‑97 (MQ=255)
                        gTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTc                                                                    <  1:4399901/97‑1 (MQ=255)
                        gTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTc                                                                    <  2:865742/97‑1 (MQ=255)
                         tCCATCTATCGCGCCAACAAATGCTAAATGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCa                                                                   <  1:1624082/97‑1 (MQ=255)
                          ccATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCaa                                                                  <  2:1586054/97‑1 (MQ=255)
                          ccATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCaa                                                                  <  2:938197/97‑1 (MQ=255)
                          ccATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCaa                                                                  >  1:389828/1‑97 (MQ=255)
                          ccATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCaa                                                                  <  1:1363561/97‑1 (MQ=255)
                          ccATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCaa                                                                  >  1:2659815/1‑97 (MQ=255)
                           cATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAAt                                                                 <  1:3048862/97‑1 (MQ=255)
                              cTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGtt                                                              <  2:482231/97‑1 (MQ=255)
                               tATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGatt                                                             >  2:3095649/1‑97 (MQ=255)
                                aTCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTa                                                            >  1:2142608/1‑97 (MQ=255)
                                aTCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTa                                                            >  1:1396483/1‑97 (MQ=255)
                                aTCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTa                                                            <  2:3944108/97‑1 (MQ=255)
                                 tCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTaa                                                           <  1:1735316/97‑1 (MQ=255)
                                 tCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTaa                                                           <  1:4526699/97‑1 (MQ=255)
                                  cgcgCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTaaa                                                          <  2:132248/97‑1 (MQ=255)
                                  cgcgCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTaaa                                                          >  1:4167315/1‑97 (MQ=255)
                                  cgcgCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTaaa                                                          >  1:2735045/1‑97 (MQ=255)
                                   gcgcCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAAc                                                         >  1:1036316/1‑97 (MQ=255)
                                   gcgcCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAAc                                                         >  1:553177/1‑97 (MQ=255)
                                   gcgcCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAAc                                                         >  2:4377248/1‑97 (MQ=255)
                                        aacaaATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGaaa                                                    <  2:3204938/97‑1 (MQ=255)
                                        aacaaATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGaaa                                                    <  2:459376/97‑1 (MQ=255)
                                         acaaATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAAt                                                   >  2:832445/1‑97 (MQ=255)
                                          caaATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATc                                                  <  2:4112450/97‑1 (MQ=255)
                                             aTGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTgg                                               >  2:3280999/1‑97 (MQ=255)
                                               gCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTg                                             >  2:1463373/1‑97 (MQ=255)
                                                cTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGa                                            >  1:3800442/1‑97 (MQ=255)
                                                  aaaGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATa                                          <  2:1081971/97‑1 (MQ=255)
                                                   aaGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATaa                                         >  1:2260811/1‑97 (MQ=255)
                                                     ggTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATaaaa                                       <  2:302914/97‑1 (MQ=255)
                                                       tACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACa                                     >  2:716221/1‑97 (MQ=255)
                                                       tACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACa                                     <  1:3378435/97‑1 (MQ=255)
                                                       tACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACa                                     >  2:2203522/1‑97 (MQ=255)
                                                        aCATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACAt                                    >  1:3651044/1‑97 (MQ=255)
                                                        aCATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACAt                                    <  2:1162005/97‑1 (MQ=255)
                                                         cATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACAtt                                   >  1:3564871/1‑97 (MQ=255)
                                                          aTTTGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCGATGTTTAAACTGAAATCTGGTGATAAAACAttt                                  <  1:2188266/97‑1 (MQ=255)
                                                           tttGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTg                                 <  2:775579/97‑1 (MQ=255)
                                                            ttGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGa                                <  2:1719079/97‑1 (MQ=255)
                                                             tGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGaa                               >  1:4091622/1‑97 (MQ=255)
                                                             tGTCGTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGaa                               >  2:1963986/1‑97 (MQ=255)
                                                                 gTTGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAg                           >  2:670128/1‑97 (MQ=255)
                                                                   tGCTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGat                         >  1:2229229/1‑97 (MQ=255)
                                                                     cTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGataa                       >  1:3855819/1‑97 (MQ=255)
                                                                     cTGATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGataa                       <  1:1710557/97‑1 (MQ=255)
                                                                       gATGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGataata                     <  1:1312368/97‑1 (MQ=255)
                                                                        aTGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATAc                    <  2:3453987/97‑1 (MQ=255)
                                                                        aTGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATAc                    <  1:495815/97‑1 (MQ=255)
                                                                        aTGTGACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATAc                    >  2:2757991/1‑97 (MQ=255)
                                                                          gtgACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAg                  <  1:1110691/97‑1 (MQ=255)
                                                                           tgACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAgg                 >  1:2333470/1‑97 (MQ=255)
                                                                            gACGATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGc                >  1:1890874/1‑97 (MQ=255)
                                                                               gATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCa             >  1:1565263/1‑97 (MQ=255)
                                                                               gATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCa             <  2:3730514/97‑1 (MQ=255)
                                                                               gATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCa             <  1:2426761/97‑1 (MQ=255)
                                                                               gATTAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCa             >  1:3071802/1‑97 (MQ=255)
                                                                                 ttAAAAACAAAGATATGGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAGAACATTTGAAGCTGATAATACAGGCTCAAt           <  2:1258223/97‑1 (MQ=255)
                                                                                  tAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATg          <  1:1519940/97‑1 (MQ=255)
                                                                                  tAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATg          >  1:23613/1‑97 (MQ=255)
                                                                                  tAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATg          >  2:2071100/1‑97 (MQ=255)
                                                                                  tAAAAACAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATg          >  2:2485368/1‑97 (MQ=255)
                                                                                    aaaaCAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTc        >  2:4289742/1‑97 (MQ=255)
                                                                                    aaaaCAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTc        >  2:3304105/1‑97 (MQ=255)
                                                                                    aaaaCAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTc        <  2:318497/97‑1 (MQ=255)
                                                                                     aaaCAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTCt       >  1:4266558/1‑97 (MQ=255)
                                                                                      aaCAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTCTg      >  2:2350485/1‑97 (MQ=255)
                                                                                       aCAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTCTGc     >  2:4172444/1‑97 (MQ=255)
                                                                                       aCAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATCTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTCTGc     >  2:3743782/1‑97 (MQ=255)
                                                                                        cAAAGATAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTCTGCt    >  1:906924/1‑97 (MQ=255)
                                                                                             |                                                                                             
CAGTTGAAACTATGAAATCAGTTGGTCCATCTATCGCGCCAACAAATGCTAAAGGTACATTTGTCGTTGCTGATGTGACGATTAAAAACAAAGGTAAAGAAGCGTTAACAATTGATAGTTCAATGTTTAAACTGAAATCTGGTGATAAAACATTTGAAGCAGATAATACAGGCTCAATGTCTGCTAA  >  BX571857/1868249‑1868435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: