breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	4,977	C→T	6.1%	intergenic (‑596/+35)	trmF ← / ← trmE	tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase
RA	4,980	A→G	6.0%	intergenic (‑599/+32)	trmF ← / ← trmE	tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase
RA	6,339	T→A	5.8%	Q15L (CAG→CTG)	trmE ←	GTPase
RA	6,346	T→G	8.1%	T13P (ACG→CCG)	trmE ←	GTPase
RA	26,837:1	+A	11.4%	intergenic (+33/+152)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	26,844	A→T	12.4%	intergenic (+40/+145)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	27,581	C→T	11.3%	intergenic (‑428/+18)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	27,584	A→G	10.9%	intergenic (‑431/+15)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	58,363	T→C	5.4%	intergenic (‑274/+414)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,747	T→A	6.1%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	6.1%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,598	T→G	5.1%	P225P (CCA→CCC)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	77,500	A→T	10.8%	L15H (CTC→CAC)	rsmB ←	ribosomal RNA small subunit methyltransferase B
RA	77,503	A→T	10.8%	V14E (GTG→GAG)	rsmB ←	ribosomal RNA small subunit methyltransferase B
RA	88,649	T→A	7.1%	A223A (GCA→GCT)	betC ←	choline‑sulfatase
RA	88,653	T→A	6.1%	Q222L (CAG→CTG)	betC ←	choline‑sulfatase
RA	88,657	T→A	7.5%	S221C (AGC→TGC)	betC ←	choline‑sulfatase
RA	88,807	G→T	5.1%	Q171K (CAG→AAG)	betC ←	choline‑sulfatase
RA	118,131	A→T	7.0%	intergenic (‑47/+18)	metQ ← / ← metI	methionine ABC transporter substrate‑binding protein/ABC transporter permease
RA	126,115	A→G	5.5%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	132,463	G→A	6.3%	intergenic (+37/‑115)	cc → / → dsbA	cytochrome c4/thiol:disulfide interchange protein
RA	132,467	G→C	5.9%	intergenic (+41/‑111)	cc → / → dsbA	cytochrome c4/thiol:disulfide interchange protein
RA	132,471	T→C	5.9%	intergenic (+45/‑107)	cc → / → dsbA	cytochrome c4/thiol:disulfide interchange protein
RA	152,157	A→T	10.6%	intergenic (‑51/+43)	PP_0143 ← / ← PP_0144	membrane protein/insulinase family metalloprotease
RA	152,158	A→T	10.6%	intergenic (‑52/+42)	PP_0143 ← / ← PP_0144	membrane protein/insulinase family metalloprotease
RA	160,310	C→T	6.5%	E27K (GAG→AAG)	PP_0149 ←	hypothetical protein
RA	160,311	A→G	6.4%	L26L (CTT→CTC)	PP_0149 ←	hypothetical protein
RA	162,270	C→T	7.1%	intergenic (‑304/+70)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,281	A→T	9.5%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	10.0%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	163,968:1	+T	5.6%	intergenic (‑135/+52)	scpC ← / ← pntB	propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta
RA	163,973	T→A	5.6%	intergenic (‑140/+47)	scpC ← / ← pntB	propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta
RA	163,978	Δ1 bp	5.6%	intergenic (‑145/+42)	scpC ← / ← pntB	propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta
RA	181,943	C→T	32.3%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,035	A→T	5.8%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036	T→C	7.1%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036:1	+C	5.1%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	195,559	C→A	17.3%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	10.9%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	10.5%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	38.8%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	10.1%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	195,732	A→C	5.5%	N413T (AAC→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	17.4%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	23.6%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	32.1%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	38.3%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	7.1%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	15.5%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,179	A→G	6.5%	V895V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,524	A→G	5.2%	V1010V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	12.0%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	17.9%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	20.4%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	8.7%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	8.6%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,777	T→A	6.7%	L1428Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	202,309	C→G	6.4%	V2605V (GTC→GTG)	PP_0168 →	putative surface adhesion protein
RA	206,064	T→A	6.4%	L3857Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	212,034	T→A	9.3%	L5847Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	212,694	T→A	9.3%	L6067Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	220,561	A→T	7.5%	intergenic (+18/‑110)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,562	C→G	7.1%	intergenic (+19/‑109)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,563	A→T	7.5%	intergenic (+20/‑108)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	225,542	A→T	6.0%	L40Q (CTG→CAG)	PP_0173 ←	transcriptional factor‑like protein
RA	225,545	A→T	5.9%	L39Q (CTG→CAG)	PP_0173 ←	transcriptional factor‑like protein
RA	228,066	G→A	6.0%	G298S (GGC→AGC)	PP_0176 →	putative efflux transporter
RA	233,832	A→T	7.0%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	6.7%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	8.2%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	268,744	T→A	8.2%	intergenic (‑75/+25)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	268,746	G→C	8.6%	intergenic (‑77/+23)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	274,785	T→G	8.3%	D388A (GAC→GCC)	PP_0222 ←	DszA family monooxygenase
RA	274,788	A→T	8.2%	L387Q (CTG→CAG)	PP_0222 ←	DszA family monooxygenase
RA	274,791	C→A	7.8%	G386V (GGC→GTC)	PP_0222 ←	DszA family monooxygenase
RA	284,587	T→A	10.5%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	9.8%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	292,607	C→G	5.4%	intergenic (+22/‑38)	ssuA → / → ssuD	aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase
RA	296,370	C→A	6.2%	A20S (GCG→TCG)	PP_0242 ←	TetR family transcriptional regulator
RA	296,371	C→G	6.2%	E19D (GAG→GAC) ‡	PP_0242 ←	TetR family transcriptional regulator
RA	296,372	T→G	5.9%	E19A (GAG→GCG) ‡	PP_0242 ←	TetR family transcriptional regulator
RA	305,154	Δ1 bp	6.9%	intergenic (+11/+18)	hslR → / ← PP_0251	heat shock protein Hsp15/membrane protein
RA	305,156:1	+A	6.9%	intergenic (+13/+16)	hslR → / ← PP_0251	heat shock protein Hsp15/membrane protein
RA	321,440	A→G	6.6%	T278A (ACT→GCT)	aguA →	agmatine deiminase
RA	322,135	G→A	32.3%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	32.4%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	326,067	C→A	5.1%	*556Y (TAG→TAT)	PP_0269 ←	glutamate synthase large subunit
RA	326,070	T→G	5.7%	A555A (GCA→GCC)	PP_0269 ←	glutamate synthase large subunit
RA	334,605	A→T	13.0%	L28* (TTG→TAG) ‡	PP_0276 ←	Cro/CI family transcriptional regulator
RA	334,606	A→T	13.0%	L28M (TTG→ATG) ‡	PP_0276 ←	Cro/CI family transcriptional regulator
RA	337,794	A→G	7.7%	intergenic (‑41/+88)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,795	C→T	7.6%	intergenic (‑42/+87)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,820:1	+A	6.1%	intergenic (‑67/+62)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	7.4%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	5.8%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,831	Δ1 bp	5.7%	intergenic (‑78/+51)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	10.4%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	338,068	G→T	6.4%	A168A (GCC→GCA)	PP_0280 ←	amino acid ABC transporter permease
RA	338,071	A→C	6.2%	S167R (AGT→AGG)	PP_0280 ←	amino acid ABC transporter permease
RA	339,228	C→G	6.8%	M12I (ATG→ATC)	PP_0281 ←	amino acid ABC transporter permease
RA	342,823	Δ1 bp	6.4%	coding (1337/1386 nt)	gabP‑I →	gamma‑aminobutyrate permease
RA	342,831:1	+A	6.8%	coding (1345/1386 nt)	gabP‑I →	gamma‑aminobutyrate permease
RA	343,610	T→A	6.5%	intergenic (‑163/‑77)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,611	G→C	6.6%	intergenic (‑164/‑76)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,612	T→A	6.7%	intergenic (‑165/‑75)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	344,035	A→G	12.4%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,044	Δ1 bp	15.6%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	16.1%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	367,365	C→A	6.3%	intergenic (‑48/+26)	PP_5442 ← / ← PP_0306	hypothetical protein/hypothetical protein
RA	367,370	T→G	6.3%	intergenic (‑53/+21)	PP_5442 ← / ← PP_0306	hypothetical protein/hypothetical protein
RA	374,742	G→T	8.7%	R10L (CGC→CTC)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	374,745	C→G	8.7%	A11G (GCC→GGC)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	374,748	A→C	8.2%	E12A (GAG→GCG)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	378,092	Δ1 bp	5.7%	intergenic (+32/+33)	PP_0314 → / ← gbcA	hypothetical protein/glycine‑betaine dioxygenase subunit
RA	378,094	T→A	5.7%	intergenic (+34/+31)	PP_0314 → / ← gbcA	hypothetical protein/glycine‑betaine dioxygenase subunit
RA	378,097	T→A	5.7%	intergenic (+37/+28)	PP_0314 → / ← gbcA	hypothetical protein/glycine‑betaine dioxygenase subunit
RA	378,098:1	+A	5.7%	intergenic (+38/+27)	PP_0314 → / ← gbcA	hypothetical protein/glycine‑betaine dioxygenase subunit
RA	384,786	C→G	5.9%	R421G (CGC→GGC)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,790	A→T	5.5%	N422I (AAT→ATT)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,794	C→G	5.4%	A423A (GCC→GCG)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	432,996	A→T	6.8%	intergenic (+18/+29)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,997	A→T	6.8%	intergenic (+19/+28)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,998	A→T	6.8%	intergenic (+20/+27)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	439,419	A→T	7.9%	N185K (AAT→AAA)	PP_0361 ←	competence protein ComF
RA	461,033	C→G	5.1%	V479L (GTG→CTG)	pqqF ←	coenzyme PQQ synthesis protein F
RA	461,040	T→G	5.6%	P476P (CCA→CCC)	pqqF ←	coenzyme PQQ synthesis protein F
RA	464,323	G→C	11.9%	H259Q (CAC→CAG) ‡	davB ←	lysine 2‑monooxygenase
RA	464,324	T→A	12.1%	H259L (CAC→CTC) ‡	davB ←	lysine 2‑monooxygenase
RA	464,325	G→C	11.8%	H259D (CAC→GAC) ‡	davB ←	lysine 2‑monooxygenase
RA	467,101	A→G	5.4%	intergenic (‑31/+22)	PP_5445 ← / ← PP_t71	hypothetical protein/tRNA‑Met
RA	467,104	C→T	5.3%	intergenic (‑34/+19)	PP_5445 ← / ← PP_t71	hypothetical protein/tRNA‑Met
RA	471,069	T→C	8.5%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,070	G→A	8.6%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	476,666	G→C	5.2%	A319P (GCC→CCC)	tsaD →	tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD
RA	492,311	T→C	7.5%	D38G (GAC→GGC)	lptD ←	LPS‑assembly protein LptD
RA	492,317	T→A	7.5%	Q36L (CAG→CTG)	lptD ←	LPS‑assembly protein LptD
RA	492,323	G→A	7.4%	A34V (GCC→GTC)	lptD ←	LPS‑assembly protein LptD
RA	496,099	T→A	5.4%	intergenic (‑63/‑33)	PP_0408 ← / → PP_0409	hypothetical protein/two‑component system sensor histidine kinase
RA	500,941	G→A	5.1%	A108T (GCC→ACC)	PP_0412 →	polyamine ABC transportersubstrate‑binding protein
RA	503,828	Δ1 bp	5.6%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	508,957:1	+C	8.6%	coding (57/1890 nt)	estP ←	esterase EstP
RA	524,352	G→C	10.0%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	10.8%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	546,005	G→A	5.1%	intergenic (+42/‑31)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,010	G→T	6.2%	intergenic (+47/‑26)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,011	A→T	6.1%	intergenic (+48/‑25)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,012	A→C	6.1%	intergenic (+49/‑24)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,017	T→C	6.4%	intergenic (+54/‑19)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	550,552	C→G	11.0%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	557,335	Δ1 bp	10.3%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,339:1	+A	10.3%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	564,380:1	+A	9.6%	intergenic (+29/‑144)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	564,385	Δ1 bp	9.8%	intergenic (+34/‑139)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	572,521	A→G	5.8%	I191T (ATC→ACC)	PP_0486 ←	GntR family transcriptional regulator
RA	572,528	C→T	6.8%	V189M (GTG→ATG)	PP_0486 ←	GntR family transcriptional regulator
RA	593,437	A→C	5.0%	E391A (GAG→GCG)	PP_0503 →	MFS transporter
RA	609,782	A→C	6.5%	L356R (CTG→CGG) ‡	PP_0525 ←	B12 family TonB‑dependent receptor
RA	609,783	G→T	5.8%	L356M (CTG→ATG) ‡	PP_0525 ←	B12 family TonB‑dependent receptor
RA	626,559	T→G	7.5%	K213Q (AAG→CAG)	dedA ←	inner membrane protein
RA	626,572	C→A	6.3%	L208L (CTG→CTT)	dedA ←	inner membrane protein
RA	634,122	A→T	5.7%	Q142L (CAG→CTG)	PP_0546 →	sigma‑54 dependent transcriptional regulator
RA	634,128:1	+C	5.7%	coding (431/2016 nt)	PP_0546 →	sigma‑54 dependent transcriptional regulator
RA	651,426	T→A	5.1%	K414M (AAG→ATG)	dsbD‑I ←	thiol/disulfide interchange protein 1
RA	652,767	G→C	9.9%	intergenic (‑101/+17)	dsbD‑I ← / ← ctpL	thiol/disulfide interchange protein 1/methyl‑accepting chemotaxis protein CtpL
RA	652,770	G→C	10.0%	intergenic (‑104/+14)	dsbD‑I ← / ← ctpL	thiol/disulfide interchange protein 1/methyl‑accepting chemotaxis protein CtpL
RA	660,595	T→C	6.8%	G546G (GGT→GGC)	speA →	biosynthetic arginine decarboxylase
RA	660,596	G→A	6.8%	A547T (GCC→ACC)	speA →	biosynthetic arginine decarboxylase
RA	660,599	T→C	6.5%	Y548H (TAC→CAC)	speA →	biosynthetic arginine decarboxylase
RA	664,889	C→T	5.4%	A584A (GCC→GCT)	yfhM →	lipoprotein
RA	666,931	Δ1 bp	5.8%	coding (3794/4902 nt)	yfhM →	lipoprotein
RA	667,326	C→G	5.3%	R1397G (CGT→GGT)	yfhM →	lipoprotein
RA	684,844	Δ1 bp	5.5%	coding (1406/2400 nt)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	684,849:1	+A	6.4%	coding (1401/2400 nt)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	697,253	G→A	8.2%	intergenic (+177/‑574)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	48.3%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	709,556	A→T	5.4%	K100* (AAG→TAG)	ribF →	bifunctional riboflavin kinase/FMN adenylyltransferase
RA	726,945	A→T	7.5%	intergenic (‑189/+78)	PP_0620 ← / ← PP_0621	GntR family transcriptional regulator/hypothetical protein
RA	726,947	A→C	7.4%	intergenic (‑191/+76)	PP_0620 ← / ← PP_0621	GntR family transcriptional regulator/hypothetical protein
RA	726,949	C→T	6.5%	intergenic (‑193/+74)	PP_0620 ← / ← PP_0621	GntR family transcriptional regulator/hypothetical protein
RA	726,953	G→T	6.7%	intergenic (‑197/+70)	PP_0620 ← / ← PP_0621	GntR family transcriptional regulator/hypothetical protein
RA	727,318	C→T	5.7%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,319	A→T	5.5%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	729,100	C→T	7.7%	Q196* (CAG→TAG) ‡	rluD →	23S rRNA pseudouridine(1911/1915/1917) synthase
RA	729,101	A→G	8.5%	Q196R (CAG→CGG) ‡	rluD →	23S rRNA pseudouridine(1911/1915/1917) synthase
RA	733,648	A→T	12.1%	intergenic (+19/‑28)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,649	A→T	11.8%	intergenic (+20/‑27)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,650	A→T	12.4%	intergenic (+21/‑26)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	772,181	T→C	12.0%	intergenic (+39/‑160)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,182	T→G	12.0%	intergenic (+40/‑159)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,185	C→A	11.5%	intergenic (+43/‑156)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,186	G→A	11.5%	intergenic (+44/‑155)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	780,559	A→C	10.6%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,561	T→A	10.6%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,563	G→T	10.8%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	790,960	T→A	6.6%	Q46L (CAG→CTG)	PP_0677 ←	lipoprotein
RA	792,038	G→A	5.7%	F338F (TTC→TTT)	PP_0678 ←	hypothetical protein
RA	797,512	G→A	8.0%	intergenic (+33/‑44)	PP_0682 → / → PP_0683	inner membrane protein/hypothetical protein
RA	798,632	T→A	9.8%	L201Q (CTG→CAG)	fklB‑I →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	809,807	C→G	6.0%	P124R (CCC→CGC) ‡	PP_0696 →	hypothetical protein
RA	809,808	C→G	5.9%	P124P (CCC→CCG) ‡	PP_0696 →	hypothetical protein
RA	838,006	Δ1 bp	7.7%	intergenic (‑39/+41)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	838,010:1	+C	7.7%	intergenic (‑43/+37)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	850,994	C→G	8.1%	intergenic (‑574/‑231)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,995	C→G	8.0%	intergenic (‑575/‑230)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	867,783	T→A	5.2%	F65I (TTC→ATC)	PP_0750 →	hypothetical protein
RA	868,054	G→T	6.5%	intergenic (+149/+28)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,055	A→C	6.5%	intergenic (+150/+27)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	869,996	G→T	6.6%	intergenic (‑406/+196)	mqo‑I ← / ← PP_5456	malate:quinone oxidoreductase/hypothetical protein
RA	870,233	G→T	7.7%	R65S (CGC→AGC)	PP_5456 ←	hypothetical protein
RA	870,234	A→C	8.1%	A64A (GCT→GCG)	PP_5456 ←	hypothetical protein
RA	871,188	A→T	6.8%	intergenic (+33/+42)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,189	G→C	6.8%	intergenic (+34/+41)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,190	T→A	7.6%	intergenic (+35/+40)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,191	G→C	6.9%	intergenic (+36/+39)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,192	A→T	6.7%	intergenic (+37/+38)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	873,421	G→A	5.3%	G18S (GGC→AGC)	PP_5457 →	hypothetical protein
RA	874,539:1	+T	6.0%	coding (115/840 nt)	PP_0759 →	hypothetical protein
RA	874,543	Δ1 bp	6.0%	coding (119/840 nt)	PP_0759 →	hypothetical protein
RA	874,554	T→C	6.0%	Y44H (TAC→CAC)	PP_0759 →	hypothetical protein
RA	895,213	G→C	5.7%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	919,675	G→C	7.7%	intergenic (‑143/+48)	PP_5458 ← / ← PP_0800	hypothetical protein/hypothetical protein
RA	922,760	G→C	5.0%	Q91E (CAG→GAG)	PP_0803 ←	protein secretion ABC transporter permease
RA	935,513	C→G	6.8%	G3371A (GGC→GCC) ‡	PP_0806 ←	surface adhesion protein
RA	935,514	C→G	6.7%	G3371R (GGC→CGC) ‡	PP_0806 ←	surface adhesion protein
RA	944,829	A→T	6.2%	S266T (TCG→ACG)	PP_0806 ←	surface adhesion protein
RA	944,834	G→A	6.8%	P264L (CCC→CTC)	PP_0806 ←	surface adhesion protein
RA	944,837	T→C	6.9%	E263G (GAG→GGG)	PP_0806 ←	surface adhesion protein
RA	944,842	A→T	7.3%	R261R (CGT→CGA)	PP_0806 ←	surface adhesion protein
RA	945,386	C→T	5.1%	G80D (GGC→GAC)	PP_0806 ←	surface adhesion protein
RA	945,389	A→G	5.1%	V79A (GTC→GCC)	PP_0806 ←	surface adhesion protein
RA	953,241	G→A	5.0%	G16E (GGG→GAG)	cyoC →	cytochrome bo terminal oxidase subunit III
RA	955,155	T→A	14.6%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	970,240	T→G	6.2%	F29C (TTC→TGC) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	970,241	C→A	6.2%	F29L (TTC→TTA) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	977,876	T→A	5.9%	intergenic (+39/‑141)	cysE → / → iscR	serine acetyltransferase/DNA‑binding transcriptional regulator IscR
RA	977,879	T→A	6.1%	intergenic (+42/‑138)	cysE → / → iscR	serine acetyltransferase/DNA‑binding transcriptional regulator IscR
RA	978,341	C→A	6.0%	L109M (CTG→ATG) ‡	iscR →	DNA‑binding transcriptional regulator IscR
RA	978,342	T→G	5.8%	L109R (CTG→CGG) ‡	iscR →	DNA‑binding transcriptional regulator IscR
RA	983,279	T→C	5.1%	L96P (CTG→CCG)	fdx →	ferredoxin
RA	990,691	C→G	5.5%	T190S (ACC→AGC)	PP_0856 →	lipoprotein
RA	994,412	G→T	6.4%	D94Y (GAT→TAT)	PP_0859 →	ketoglutaramate omega‑amidase
RA	994,951	T→A	5.1%	intergenic (+27/+98)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	998,973	G→A	5.5%	G383G (GGC→GGT)	PP_0861 ←	outer membrane ferric siderophore receptor
RA	1,001,196	A→T	8.0%	Q57L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,001,199	A→T	8.0%	Q58L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,013,240	A→G	7.1%	intergenic (+65/+66)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,034,963	T→C	5.4%	L333L (TTG→CTG)	PP_0892 →	phospholipase family protein
RA	1,034,969	G→A	5.4%	A335T (GCG→ACG)	PP_0892 →	phospholipase family protein
RA	1,039,265	G→C	6.6%	R45G (CGC→GGC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,269	A→T	6.1%	A43A (GCT→GCA)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,273	G→C	6.1%	P42R (CCT→CGT)	PP_0897 ←	class 1 fumarate hydratase
RA	1,060,105:1	+T	5.7%	coding (248/891 nt)	iciA →	chromosome initiation inhibitor
RA	1,062,133	T→C	6.4%	A90A (GCT→GCC)	PP_0919 →	hypothetical protein
RA	1,062,134	G→A	6.2%	G91S (GGC→AGC)	PP_0919 →	hypothetical protein
RA	1,070,265	G→C	16.2%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	17.2%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,096,740	G→C	7.7%	A76G (GCC→GGC)	lptB ←	ABC transporter ATP‑binding protein
RA	1,096,745	G→C	7.4%	G74G (GGC→GGG)	lptB ←	ABC transporter ATP‑binding protein
RA	1,123,943	T→A	8.8%	intergenic (‑138/+83)	PP_mr13 ← / ← gcvT‑I	cspA regulatory region/aminomethyltransferase
RA	1,123,948	T→A	8.8%	intergenic (‑143/+78)	PP_mr13 ← / ← gcvT‑I	cspA regulatory region/aminomethyltransferase
RA	1,130,198	A→T	5.1%	intergenic (‑247/+57)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,134,095	A→T	5.3%	intergenic (+34/+44)	PP_0995 → / ← gltS	membrane protein/glutamate:sodium symporter
RA	1,145,439	C→T	9.2%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	9.3%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	9.2%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	11.4%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,148,409	C→T	5.3%	G281D (GGC→GAC)	PP_1007 ←	transmembrane sensor
RA	1,150,010	G→A	5.8%	intergenic (‑251/+6)	PP_1008 ← / ← gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,151,972	C→T	8.0%	Q231* (CAG→TAG) ‡	edd →	phosphogluconate dehydratase
RA	1,151,973	A→G	8.9%	Q231R (CAG→CGG) ‡	edd →	phosphogluconate dehydratase
RA	1,157,858:1	+T	100%	intergenic (+89/‑16)	yihS → / → gtsA	aldose‑ketose isomerase/mannose/glucose ABC transporter substrate‑binding protein
RA	1,184,574	A→G	10.9%	intergenic (‑184/‑228)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,591	G→C	22.0%	intergenic (‑201/‑211)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,594	G→C	21.6%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,193,934	T→A	8.4%	L23M (TTG→ATG) ‡	uxpA →	lipoprotein UxpA
RA	1,193,935	T→A	8.4%	L23* (TTG→TAG) ‡	uxpA →	lipoprotein UxpA
RA	1,198,338	C→T	5.6%	A214A (GCC→GCT)	gspE →	protein secretion protein
RA	1,198,339	A→G	5.0%	S215G (AGC→GGC)	gspE →	protein secretion protein
RA	1,202,860	A→C	7.8%	Q228P (CAG→CCG)	xcpY →	type II secretion pathway protein XcpY
RA	1,202,863	G→T	7.0%	R229L (CGG→CTG)	xcpY →	type II secretion pathway protein XcpY
RA	1,221,043	T→G	5.6%	D90A (GAC→GCC)	dctD‑II ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,229,085	G→C	5.6%	E753D (GAG→GAC)	PP_1072 →	leucine‑rich repeat‑containing protein
RA	1,229,553	G→C	5.2%	Q909H (CAG→CAC)	PP_1072 →	leucine‑rich repeat‑containing protein
RA	1,237,662	C→T	6.7%	L151L (CTG→CTA) ‡	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,237,663	A→G	6.7%	L151P (CTG→CCG) ‡	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,237,671	G→A	6.4%	A148A (GCC→GCT)	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,249,755	A→T	7.0%	intergenic (+22/+49)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,757	C→G	7.4%	intergenic (+24/+47)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,759	A→T	7.5%	intergenic (+26/+45)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,261,542:1	+T	10.3%	coding (1099/1116 nt)	PP_1104 ←	AotO‑related protein
RA	1,261,548	T→A	10.7%	S365C (AGC→TGC)	PP_1104 ←	AotO‑related protein
RA	1,261,554	Δ1 bp	11.1%	coding (1087/1116 nt)	PP_1104 ←	AotO‑related protein
RA	1,261,563	C→G	5.1%	E360Q (GAA→CAA)	PP_1104 ←	AotO‑related protein
RA	1,263,102	G→A	6.1%	H437H (CAC→CAT) ‡	PP_1105 ←	ATP‑dependent DNA ligase
RA	1,263,103	T→C	6.2%	H437R (CAC→CGC) ‡	PP_1105 ←	ATP‑dependent DNA ligase
RA	1,266,695	A→T	12.5%	A433A (GCT→GCA)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,266,698	A→T	11.0%	A432A (GCT→GCA)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,266,916	G→C	6.8%	R360G (CGC→GGC)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,266,920	G→C	7.0%	R358R (CGC→CGG)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,266,923	G→C	6.9%	A357A (GCC→GCG)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,269,392	C→G	8.0%	A16P (GCA→CCA)	PP_1109 ←	GntR family transcriptional regulator
RA	1,269,395	C→G	7.8%	D15H (GAT→CAT)	PP_1109 ←	GntR family transcriptional regulator
RA	1,275,090	G→C	8.8%	intergenic (‑281/+31)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,275,093	G→C	8.4%	intergenic (‑284/+28)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,277,464	Δ1 bp	5.1%	intergenic (‑89/+506)	PP_1116 ← / ← PP_5465	resolvase family site‑specific recombinase/hypothetical protein
RA	1,293,261	T→G	5.9%	A286A (GCT→GCG)	PP_1128 →	OmpA family protein
RA	1,293,265	A→T	5.7%	K288* (AAG→TAG) ‡	PP_1128 →	OmpA family protein
RA	1,293,266	A→T	5.3%	K288M (AAG→ATG) ‡	PP_1128 →	OmpA family protein
RA	1,294,120	C→T	9.8%	intergenic (+15/+25)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,121	A→T	9.3%	intergenic (+16/+24)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,122	A→G	11.8%	intergenic (+17/+23)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,295,019	Δ1 bp	5.3%	intergenic (+29/+41)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,027	T→A	6.7%	intergenic (+37/+33)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,031:1	+T	6.4%	intergenic (+41/+29)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,310,449	G→C	7.9%	L364V (CTG→GTG)	PP_1144 ←	membrane protein
RA	1,310,451	T→A	5.4%	D363V (GAC→GTC)	PP_1144 ←	membrane protein
RA	1,310,453	G→C	6.2%	H362Q (CAC→CAG)	PP_1144 ←	membrane protein
RA	1,327,127	C→T	50.0%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,350,507	T→A	9.9%	K11N (AAA→AAT) ‡	PP_1176 ←	hypothetical protein
RA	1,350,508	T→A	9.7%	K11I (AAA→ATA) ‡	PP_1176 ←	hypothetical protein
RA	1,364,664	A→T	10.3%	intergenic (+28/+121)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,665	A→T	10.3%	intergenic (+29/+120)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,666	A→T	10.3%	intergenic (+30/+119)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,376,327	A→T	12.5%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,328	G→C	12.5%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,329	A→T	12.5%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,382,332	A→T	6.1%	intergenic (+12/+15)	dinB → / ← PP_1204	DNA polymerase IV/lipoprotein
RA	1,382,541	G→T	5.5%	L256I (CTC→ATC)	PP_1204 ←	lipoprotein
RA	1,382,543	T→A	5.6%	D255V (GAC→GTC)	PP_1204 ←	lipoprotein
RA	1,382,545	A→C	5.6%	D254E (GAT→GAG)	PP_1204 ←	lipoprotein
RA	1,385,193	A→T	6.6%	intergenic (‑157/+4)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,199	A→G	6.5%	*422Q (TAA→CAA)	oprD ←	basic amino acid specific porin OprD
RA	1,385,572	G→A	5.5%	G297G (GGC→GGT)	oprD ←	basic amino acid specific porin OprD
RA	1,385,576	T→G	5.8%	D296A (GAC→GCC)	oprD ←	basic amino acid specific porin OprD
RA	1,385,583	T→C	5.2%	T294A (ACC→GCC)	oprD ←	basic amino acid specific porin OprD
RA	1,400,840	C→A	5.1%	L268L (CTC→CTA)	ybgF →	TolQRA transport system periplasmic protein
RA	1,400,878	C→A	8.0%	intergenic (+35/‑134)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,880	A→T	8.4%	intergenic (+37/‑132)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,882	T→G	7.6%	intergenic (+39/‑130)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,403,596	G→A	20.0%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	20.7%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,413,439	T→A	5.3%	N155I (AAC→ATC) ‡	PP_1235 ←	AhpC/TSA family protein
RA	1,413,440	T→A	5.2%	N155Y (AAC→TAC) ‡	PP_1235 ←	AhpC/TSA family protein
RA	1,416,868	G→A	9.5%	R37Q (CGG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,874	T→A	9.4%	L39Q (CTG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,449,146	T→C	7.3%	*287R (TGA→CGA) ‡	PP_1266 →	fusaric acid resistance protein
RA	1,449,147	G→A	7.3%	*287* (TGA→TAA) ‡	PP_1266 →	fusaric acid resistance protein
RA	1,455,371	G→T	6.5%	A300S (GCC→TCC)	PP_1273 →	multidrug MFS transporter outer membrane protein
RA	1,460,546:1	+A	6.5%	coding (926/1167 nt)	algJ ←	alginate O‑acetylase AlgJ
RA	1,460,552	G→C	7.7%	A307G (GCC→GGC)	algJ ←	alginate O‑acetylase AlgJ
RA	1,460,558	Δ1 bp	7.7%	coding (914/1167 nt)	algJ ←	alginate O‑acetylase AlgJ
RA	1,463,031	A→T	7.2%	intergenic (‑100/+42)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,463,032	A→T	7.1%	intergenic (‑101/+41)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,464,203	G→A	6.8%	T474T (ACC→ACT) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,205	T→A	8.8%	T474S (ACC→TCC) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,207	T→C	7.4%	Q473R (CAG→CGG)	algX ←	alginate biosynthesis protein AlgX
RA	1,469,815	A→G	5.4%	V112A (GTG→GCG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,818	A→T	5.6%	L111Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,821	A→T	5.4%	L110Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,824	C→T	5.3%	R109H (CGC→CAC)	algK ←	alginate biosynthesis protein AlgK
RA	1,478,205	C→A	5.6%	S284S (TCC→TCA)	PP_1291 →	PhoH family protein
RA	1,491,138	Δ1 bp	7.6%	coding (794/1902 nt)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,491,144	G→C	8.8%	S267T (AGT→ACT)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,491,149:1	+A	7.7%	coding (805/1902 nt)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,497,841	T→G	8.0%	M141R (ATG→AGG)	PP_1310 →	hypothetical protein
RA	1,504,076	T→A	9.6%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,077	T→A	9.6%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,506,932	A→G	24.2%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,936	G→A	33.3%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	27.9%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	30.0%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,511,112	T→A	5.0%	pseudogene (497/1851 nt)	PP_1325 ←	putative lipoprotein
RA	1,526,622	T→A	6.9%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,631	A→C	6.7%	E259A (GAA→GCA)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,528,677	G→A	5.4%	V326I (GTC→ATC)	ftsA →	cell division protein FtsA
RA	1,544,531	C→A	15.8%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	18.1%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	20.2%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	18.2%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	18.2%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	18.3%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,549,937	A→T	5.1%	I99F (ATC→TTC)	groL →	chaperonin GroEL
RA	1,551,324	G→T	12.1%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	11.1%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,343	T→G	5.2%	intergenic (+60/+66)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,555,429:1	+C	10.2%	intergenic (+25/+49)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,432	Δ1 bp	10.2%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,576,577	T→C	5.5%	intergenic (‑55/+258)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,592,024	C→A	6.1%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	7.9%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,594,103	T→C	7.9%	intergenic (‑259/+42)	PP_1399 ← / ← kgtP	hypothetical protein/alpha‑ketoglutarate permease
RA	1,594,291	T→C	6.2%	T392A (ACC→GCC)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,292	G→A	6.0%	G391G (GGC→GGT)	kgtP ←	alpha‑ketoglutarate permease
RA	1,598,876	C→G	6.6%	intergenic (‑73/+58)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,606,449	A→T	10.8%	intergenic (‑157/+54)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,606,450	A→T	12.2%	intergenic (‑158/+53)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,629,486	G→A	8.6%	Q318Q (CAG→CAA)	mucB →	sigma factor AlgU regulator MucB
RA	1,629,495	G→T	8.2%	Q321H (CAG→CAT)	mucB →	sigma factor AlgU regulator MucB
RA	1,629,498	A→C	8.0%	*322Y (TAA→TAC)	mucB →	sigma factor AlgU regulator MucB
RA	1,637,357	T→C	6.9%	intergenic (+24/+42)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,367	A→T	16.2%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	15.0%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	14.7%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,384	A→G	11.0%	intergenic (+51/+15)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,386	C→T	7.3%	intergenic (+53/+13)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,394	G→A	5.2%	intergenic (+61/+5)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,607	A→G	8.6%	intergenic (‑155/‑156)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,617	C→T	9.1%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,618	G→T	10.3%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,622	G→A	7.8%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,623	T→C	7.9%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,627	A→C	8.7%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,628	A→G	10.0%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,638	C→T	7.6%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,306	G→A	8.0%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,334	T→C	9.0%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,343	G→A	13.1%	intergenic (‑129/+23)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,345	C→T	12.0%	intergenic (‑131/+21)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,661,519	C→A	10.8%	A50D (GCC→GAC)	PP_1456 →	membrane protein
RA	1,661,522	T→A	9.8%	L51Q (CTG→CAG)	PP_1456 →	membrane protein
RA	1,661,525	T→G	9.0%	V52G (GTC→GGC)	PP_1456 →	membrane protein
RA	1,663,117	A→T	8.7%	intergenic (+21/+17)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,663,118	A→T	8.9%	intergenic (+22/+16)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,663,119	A→T	8.9%	intergenic (+23/+15)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,676,202	C→G	7.2%	intergenic (+22/‑38)	hom → / → thrC	homoserine dehydrogenase/threonine synthase
RA	1,681,341	C→A	8.5%	N123K (AAC→AAA)	PP_1476 →	hypothetical protein
RA	1,683,290	C→G	8.0%	intergenic (+57/‑174)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,691,825	C→A	12.5%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	12.0%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,838	C→G	5.6%	intergenic (+63/‑108)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,839	G→A	5.5%	intergenic (+64/‑107)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,693,832	C→A	5.8%	R87S (CGC→AGC) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,834	C→G	6.9%	R87R (CGC→CGG) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,695,062	C→G	5.4%	A329G (GCC→GGC)	wspC →	biofilm formation methyltransferase WspC
RA	1,695,065	G→A	5.3%	R330Q (CGG→CAG)	wspC →	biofilm formation methyltransferase WspC
RA	1,695,068	T→C	6.1%	L331P (CTG→CCG)	wspC →	biofilm formation methyltransferase WspC
RA	1,698,852	Δ1 bp	5.7%	coding (558/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,698,856:1	+C	5.4%	coding (562/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,703,290	A→G	9.4%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	9.1%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294	C→T	9.4%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294:1	+T	14.1%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,704,678	T→A	10.8%	M1M (TTG→ATG) †‡	PP_1499 →	hypothetical protein
RA	1,704,679	T→A	12.1%	M1* (TTG→TAG) †‡	PP_1499 →	hypothetical protein
RA	1,707,269	G→C	15.7%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,272	G→C	15.2%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,330:1	+A	10.7%	intergenic (+106/+36)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,335	Δ1 bp	10.0%	intergenic (+111/+31)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,712,122	A→T	6.8%	intergenic (+71/‑187)	ppc → / → adk	phosphoenolpyruvate carboxylase/adenylate kinase
RA	1,712,993	T→A	5.4%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	5.4%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,724,495	T→A	9.5%	intergenic (+20/+29)	PP_1517 → / ← PP_1518	RND family transporter/hypothetical protein
RA	1,726,527	A→T	5.3%	L560Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,726,530	A→T	5.7%	L559Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,741,972	C→G	7.8%	intergenic (‑18/+66)	PP_1538 ← / ← PP_1539	hypothetical protein/hypothetical protein
RA	1,741,977	C→G	7.4%	intergenic (‑23/+61)	PP_1538 ← / ← PP_1539	hypothetical protein/hypothetical protein
RA	1,750,775	C→G	15.0%	A31G (GCC→GGC)	PP_1551 →	replication protein O
RA	1,763,724	C→A	5.6%	A8A (GCC→GCA)	PP_1572 →	hypothetical protein
RA	1,777,567	C→G	7.8%	intergenic (+259/+33)	PP_5476 → / ← PP_1585	hypothetical protein/antidote protein
RA	1,780,171	T→C	8.1%	intergenic (+88/+18)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,799,889	C→T	5.6%	intergenic (+17/‑170)	rnhB → / → dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
RA	1,799,892	G→A	8.3%	intergenic (+20/‑167)	rnhB → / → dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
RA	1,800,221	A→G	6.8%	T55A (ACT→GCT)	dnaEA →	DNA polymerase III subunit alpha
RA	1,810,377	T→G	8.2%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	8.3%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,815,968	C→T	5.2%	Q282* (CAG→TAG)	truD →	tRNA pseudouridine(13) synthase TruD
RA	1,818,526	A→G	5.1%	Y209C (TAC→TGC)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,818,531	C→T	5.1%	H211Y (CAT→TAT)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,818,534	A→G	5.7%	N212D (AAC→GAC)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,831,822	T→C	6.0%	L220P (CTG→CCG)	yfiP →	hypothetical protein
RA	1,842,798	G→A	6.2%	L680L (CTG→TTG)	gacS ←	sensor protein GacS
RA	1,844,125	Δ1 bp	100%	coding (711/2754 nt)	gacS ←	sensor protein GacS
RA	1,851,555	T→A	100%	L200Q (CTG→CAG)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,859,156	A→T	6.0%	intergenic (+34/+67)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,162	C→G	5.6%	intergenic (+40/+61)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,864,792	T→C	6.3%	A28A (GCT→GCC)	hda →	DnaA regulatory inactivator Hda
RA	1,864,795	G→A	6.2%	A29A (GCG→GCA)	hda →	DnaA regulatory inactivator Hda
RA	1,879,936	T→G	5.3%	intergenic (+78/+58)	PP_1686 → / ← PP_1687	glutathione peroxidase/hypothetical protein
RA	1,899,025	T→C	9.7%	intergenic (+53/‑467)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,028	G→A	9.4%	intergenic (+56/‑464)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,038	T→C	8.8%	intergenic (+66/‑454)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,849	A→T	5.7%	K120* (AAG→TAG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,899,850	A→T	5.7%	K120M (AAG→ATG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,903,384	A→T	6.1%	Q1298L (CAG→CTG)	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,915,868	A→T	8.0%	intergenic (+254/‑35)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,870	A→T	8.1%	intergenic (+256/‑33)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,872	A→T	7.8%	intergenic (+258/‑31)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,921,591	T→A	19.3%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	19.4%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,930,582	C→A	6.3%	P396P (CCG→CCT)	apeB ←	M18 family aminopeptidase
RA	1,930,597	C→A	6.4%	V391V (GTG→GTT)	apeB ←	M18 family aminopeptidase
RA	1,948,128	Δ1 bp	5.2%	coding (1570/1746 nt)	PP_1749 ←	acetyltransferase
RA	1,948,133:1	+G	5.2%	coding (1565/1746 nt)	PP_1749 ←	acetyltransferase
RA	1,955,252	T→A	10.6%	intergenic (+39/‑154)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,253	T→A	10.5%	intergenic (+40/‑153)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,978,751	C→G	9.3%	F45L (TTC→TTG)	cmk →	cytidylate kinase
RA	1,981,135	T→G	8.1%	intergenic (+31/‑269)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,981,136	C→A	7.9%	intergenic (+32/‑268)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,996,054	C→G	10.1%	intergenic (‑257/+28)	PP_mr26 ← / ← rfbC	C4 ncRNA/dTDP‑4‑dehydrorhamnose 3,5‑epimerase
RA	1,996,057	C→G	9.8%	intergenic (‑260/+25)	PP_mr26 ← / ← rfbC	C4 ncRNA/dTDP‑4‑dehydrorhamnose 3,5‑epimerase
RA	2,000,456	A→C	5.8%	K118N (AAA→AAC)	PP_1786 →	glycosyl transferase
RA	2,000,461	G→C	5.3%	G120A (GGC→GCC)	PP_1786 →	glycosyl transferase
RA	2,000,466	G→T	5.3%	V122F (GTT→TTT)	PP_1786 →	glycosyl transferase
RA	2,009,577	G→A	5.5%	Q634* (CAG→TAG)	PP_1792 ←	group 2 family glycosyl transferase
RA	2,019,126	C→A	6.6%	L120M (CTG→ATG) ‡	PP_1797 →	HlyD family secretion protein
RA	2,019,127	T→G	6.7%	L120R (CTG→CGG) ‡	PP_1797 →	HlyD family secretion protein
RA	2,031,413	T→G	7.9%	intergenic (+43/+32)	PP_1806 → / ← kdsA‑II	arabinose 5‑phosphate isomerase/2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,031,415	T→A	6.5%	intergenic (+45/+30)	PP_1806 → / ← kdsA‑II	arabinose 5‑phosphate isomerase/2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,039,746	A→C	8.6%	P33P (CCT→CCG) ‡	PP_1812 ←	hypothetical protein
RA	2,039,747	G→T	9.5%	P33H (CCT→CAT) ‡	PP_1812 ←	hypothetical protein
RA	2,049,346	G→T	8.8%	intergenic (‑32/+28)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,049,347	A→C	8.8%	intergenic (‑33/+27)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,068,194	A→T	11.6%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,068,195	A→T	11.8%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,080,393	G→C	7.9%	A340A (GCG→GCC)	earP →	EF‑P arginine 32 rhamnosyl‑transferase
RA	2,085,849	G→A	8.7%	intergenic (+515/‑80)	PP_1864 → / → PP_1865	hypothetical protein/transposase
RA	2,087,295	C→T	6.7%	intergenic (+65/+853)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,102,795	C→G	7.3%	noncoding (35/76 nt)	PP_t21 →	tRNA‑Gly
RA	2,109,914	C→T	7.7%	W1472* (TGG→TAG) ‡	PP_1882 ←	membrane protein
RA	2,109,915	A→G	7.7%	W1472R (TGG→CGG) ‡	PP_1882 ←	membrane protein
RA	2,134,321	G→T	6.6%	intergenic (‑44/+25)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,137,938	G→A	5.3%	intergenic (+131/‑3)	gstB → / → yadG	glutathione S‑transferase/ABC transporter ATP‑binding protein
RA	2,141,094:1	+A	7.2%	coding (787/2214 nt)	PP_1897 →	DNA internalization‑related competence protein ComEC/Rec2
RA	2,144,411	G→C	6.5%	Q239H (CAG→CAC)	lpxK →	tetraacyldisaccharide 4'‑kinase
RA	2,144,415	C→A	8.0%	L241M (CTG→ATG)	lpxK →	tetraacyldisaccharide 4'‑kinase
RA	2,154,429	T→G	10.0%	Q129P (CAG→CCG)	PP_1909 ←	septum formation protein
RA	2,154,434	T→A	7.3%	Q127H (CAA→CAT)	PP_1909 ←	septum formation protein
RA	2,154,439	C→A	7.5%	G126W (GGG→TGG)	PP_1909 ←	septum formation protein
RA	2,171,711	G→A	5.6%	intergenic (+203/+200)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,052	T→A	7.6%	Q165H (CAA→CAT) ‡	PP_1925 ←	monooxygenase
RA	2,173,053	T→A	7.5%	Q165L (CAA→CTA) ‡	PP_1925 ←	monooxygenase
RA	2,202,528	Δ1 bp	5.4%	coding (162/990 nt)	PP_1947 →	hypothetical protein
RA	2,202,531	C→G	5.3%	I55M (ATC→ATG)	PP_1947 →	hypothetical protein
RA	2,206,885	C→G	5.1%	H91Q (CAC→CAG)	PP_1950 →	hypothetical protein
RA	2,209,822	T→C	5.6%	V8V (GTT→GTC)	PP_1953 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,224,278	G→C	7.9%	G104G (GGC→GGG)	PP_1962 ←	site‑specific recombinase
RA	2,226,762	G→A	6.2%	S228F (TCC→TTC)	PP_1964 ←	dGMP/dTMP/dhydroxyCMP kinase
RA	2,246,148	C→G	5.4%	A115G (GCC→GGC)	ibpA →	small heat shock protein IbpA
RA	2,256,241	G→C	7.6%	intergenic (+258/‑446)	asd → / → PP_1990	aspartate‑semialdehyde dehydrogenase/transposase
RA	2,256,242	G→C	7.6%	intergenic (+259/‑445)	asd → / → PP_1990	aspartate‑semialdehyde dehydrogenase/transposase
RA	2,258,559	Δ1 bp	8.3%	coding (180/1005 nt)	asd →	aspartate‑semialdehyde dehydrogenase
RA	2,258,563:1	+G	8.3%	coding (184/1005 nt)	asd →	aspartate‑semialdehyde dehydrogenase
RA	2,273,095	A→G	10.9%	intergenic (+17/+274)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,105	C→G	16.7%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,109	A→T	16.2%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,113	C→G	15.9%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,275,079	A→C	5.6%	L152V (TTG→GTG)	PP_2005 ←	hypothetical protein
RA	2,275,080	G→T	5.4%	H151Q (CAC→CAA)	PP_2005 ←	hypothetical protein
RA	2,281,675	G→C	5.6%	G152R (GGC→CGC) ‡	PP_2009 →	1‑aminocyclopropane‑1‑carboxylate deaminase
RA	2,281,676	G→C	5.6%	G152A (GGC→GCC) ‡	PP_2009 →	1‑aminocyclopropane‑1‑carboxylate deaminase
RA	2,282,813	T→G	41.0%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,817	G→C	36.1%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,818	G→C	36.1%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,822	C→A	37.3%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,862	G→A	7.8%	intergenic (‑211/+18)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,868:1	+T	7.3%	intergenic (‑217/+12)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,869	A→G	7.3%	intergenic (‑218/+11)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,872	A→T	7.2%	intergenic (‑221/+8)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,285,069	T→A	7.7%	P93P (CCT→CCA)	PP_2013 →	hypothetical protein
RA	2,307,322	G→A	6.5%	L117L (CTC→CTT)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,316,298:1	+C	6.8%	coding (59/1548 nt)	PP_2038 →	long‑chain‑fatty‑acid‑‑CoA ligase
RA	2,316,303	Δ1 bp	6.8%	coding (64/1548 nt)	PP_2038 →	long‑chain‑fatty‑acid‑‑CoA ligase
RA	2,318,704	A→G	7.1%	A301A (GCA→GCG)	PP_2039 →	acyl‑CoA dehydrogenase
RA	2,318,705	C→T	8.1%	R302C (CGC→TGC)	PP_2039 →	acyl‑CoA dehydrogenase
RA	2,347,661	G→C	6.4%	V307L (GTG→CTG) ‡	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,347,663	G→C	6.4%	V307V (GTG→GTC) ‡	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,347,665	G→C	6.4%	S308T (AGC→ACC)	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,388,303	G→A	6.4%	R340R (CGG→CGA)	pyrD →	dihydroorotate dehydrogenase
RA	2,388,379	C→G	9.2%	intergenic (+73/+71)	pyrD → / ← rmf	dihydroorotate dehydrogenase/ribosome modulation factor
RA	2,404,283:1	+A	6.1%	coding (867/1209 nt)	PP_2106 →	ammonium transporter
RA	2,404,288	Δ1 bp	6.2%	coding (872/1209 nt)	PP_2106 →	ammonium transporter
RA	2,412,920	G→C	6.2%	intergenic (+141/‑280)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,947	G→C	7.6%	intergenic (+168/‑253)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,948	G→C	7.5%	intergenic (+169/‑252)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,416,597	A→T	5.3%	intergenic (+87/+28)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,416,598	A→T	5.4%	intergenic (+88/+27)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,420,641	Δ1 bp	11.3%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,645:1	+T	10.4%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,434,178	T→C	6.9%	intergenic (+78/+30)	uup → / ← PP_2132	ABC transporter ATP‑binding protein/universal stress protein
RA	2,434,179	G→A	7.0%	intergenic (+79/+29)	uup → / ← PP_2132	ABC transporter ATP‑binding protein/universal stress protein
RA	2,442,053	C→A	6.0%	P383Q (CCG→CAG)	topA →	DNA topoisomerase I
RA	2,445,724	G→A	9.3%	intergenic (‑170/‑46)	lexA‑I ← / → PP_2144	transcriptional repressor/TetR family transcriptional regulator
RA	2,445,727	T→C	6.5%	intergenic (‑173/‑43)	lexA‑I ← / → PP_2144	transcriptional repressor/TetR family transcriptional regulator
RA	2,470,656	Δ1 bp	6.1%	coding (178/1182 nt)	PP_2165 →	two‑component system response regulator
RA	2,471,564	C→T	5.9%	G362G (GGC→GGT)	PP_2165 →	two‑component system response regulator
RA	2,475,329	T→G	5.6%	intergenic (‑85/+72)	tal ← / ← dusA	transaldolase/tRNA dihydrouridine synthase DusA
RA	2,478,888	G→C	5.8%	intergenic (+98/+347)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,893	T→C	5.7%	intergenic (+103/+342)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,486,224	C→G	6.4%	A258G (GCC→GGC)	spuC‑I →	polyamine:pyruvate transaminase
RA	2,497,485	G→A	5.5%	S223N (AGC→AAC)	PP_2192 →	ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein
RA	2,508,880	C→T	6.8%	R93H (CGC→CAC)	PP_2203 ←	hypothetical protein
RA	2,508,883	A→G	7.1%	V92A (GTG→GCG)	PP_2203 ←	hypothetical protein
RA	2,511,718	G→A	7.1%	T19M (ACG→ATG) ‡	copA‑I ←	copper resistance protein A
RA	2,511,719	T→C	7.1%	T19A (ACG→GCG) ‡	copA‑I ←	copper resistance protein A
RA	2,513,644	G→C	5.1%	G109A (GGC→GCC)	PP_2207 →	membrane protein
RA	2,525,497	C→T	6.2%	A159A (GCC→GCT)	fadBA →	type II 3‑hydroxyacyl‑CoA dehydrogenase
RA	2,540,356	G→A	5.3%	Q20Q (CAG→CAA)	PP_2232 →	XRE family transcriptional regulator
RA	2,546,790	C→T	5.6%	P616P (CCC→CCT)	PP_2238 →	metallopeptidase
RA	2,555,148	C→A	5.7%	S362S (TCC→TCA)	PP_2240 →	ABC transporter permease/ATP‑binding protein
RA	2,650,203	A→T	7.5%	intergenic (+99/+35)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,204	A→T	7.2%	intergenic (+100/+34)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,658,815	G→A	6.7%	A10V (GCC→GTC)	PP_2330 ←	hypothetical protein
RA	2,669,714	T→G	5.6%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,717	C→A	5.7%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,676,860	A→G	7.2%	Q46Q (CAA→CAG)	PP_2346 →	hypothetical protein
RA	2,676,861	C→T	7.3%	L47L (CTG→TTG)	PP_2346 →	hypothetical protein
RA	2,693,846	G→A	9.1%	A32T (GCC→ACC)	PP_2362 →	usher protein
RA	2,693,853	T→C	9.5%	V34A (GTC→GCC)	PP_2362 →	usher protein
RA	2,711,029	T→G	5.9%	intergenic (+289/+25)	PP_2373 → / ← PP_2374	hypothetical protein/hypothetical protein
RA	2,711,030	C→A	6.5%	intergenic (+290/+24)	PP_2373 → / ← PP_2374	hypothetical protein/hypothetical protein
RA	2,715,463	C→A	7.0%	A45A (GCC→GCA)	cti →	esterified fatty acid cis/trans isomerase
RA	2,715,464	T→G	6.5%	C46G (TGC→GGC)	cti →	esterified fatty acid cis/trans isomerase
RA	2,749,325	C→T	6.2%	H98Y (CAC→TAC) ‡	PP_2405 →	hypothetical protein
RA	2,749,326	A→G	6.2%	H98R (CAC→CGC) ‡	PP_2405 →	hypothetical protein
RA	2,763,023:1	+A	5.0%	coding (931/1020 nt)	PP_2417 ←	iron ABC transporter permease
RA	2,764,908	G→C	5.4%	A46G (GCC→GGC)	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,772,320	T→C	5.8%	Q180R (CAG→CGG)	PP_2425 ←	AraC family transcriptional regulator
RA	2,772,323	G→A	5.9%	P179L (CCG→CTG)	PP_2425 ←	AraC family transcriptional regulator
RA	2,777,043	C→G	5.5%	A169P (GCA→CCA)	PP_2429 ←	membrane protein
RA	2,777,050	C→G	5.2%	W166C (TGG→TGC)	PP_2429 ←	membrane protein
RA	2,779,159	T→G	5.5%	E81A (GAA→GCA)	PP_2431 ←	LysR family transcriptional regulator
RA	2,804,832	C→G	5.1%	A201G (GCC→GGC)	rbsR →	DNA‑binding transcriptional repressor
RA	2,811,169	C→T	7.6%	R511R (CGC→CGT)	thrS →	threonine‑‑tRNA ligase
RA	2,812,772	G→A	13.8%	intergenic (+23/‑87)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,774	T→C	13.4%	intergenic (+25/‑85)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,781	G→A	12.3%	intergenic (+32/‑78)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,783	T→C	12.3%	intergenic (+34/‑76)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,818	C→T	9.8%	intergenic (+69/‑41)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,821	C→G	9.9%	intergenic (+72/‑38)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,824	A→G	9.8%	intergenic (+75/‑35)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,816,637	T→A	6.7%	I21N (ATT→AAT)	PP_2472 →	MerR family transcriptional regulator
RA	2,852,440	T→A	11.6%	Q312L (CAG→CTG)	PP_2505 ←	GAF domain/GGDEF domain‑containing protein
RA	2,861,170	G→T	7.9%	Q69K (CAG→AAG)	gllD ←	4‑oxalomesaconate tautomerase
RA	2,861,173	A→C	8.3%	S68A (TCG→GCG)	gllD ←	4‑oxalomesaconate tautomerase
RA	2,868,532	G→T	7.9%	intergenic (+28/‑903)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,868,534	C→G	8.0%	intergenic (+30/‑901)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,868,536	A→C	8.3%	intergenic (+32/‑899)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,880,367	G→A	6.2%	G56S (GGC→AGC)	PP_2535 →	transport protein
RA	2,897,767	T→A	6.0%	intergenic (+98/‑52)	PP_2551 → / → PP_2552	LysR family transcriptional regulator/DOPA decarboxylase
RA	2,897,768	T→A	6.1%	intergenic (+99/‑51)	PP_2551 → / → PP_2552	LysR family transcriptional regulator/DOPA decarboxylase
RA	2,898,158	C→T	5.0%	L114L (CTG→TTG)	PP_2552 →	DOPA decarboxylase
RA	2,946,630	G→C	12.0%	P312R (CCG→CGG) ‡	yijP ←	phosphoethanolamine transferase CptA
RA	2,946,631	G→C	12.0%	P312A (CCG→GCG) ‡	yijP ←	phosphoethanolamine transferase CptA
RA	2,951,377	G→C	18.2%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,384	A→C	17.8%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,385	G→T	17.8%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,392	G→C	10.7%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,982,740	C→G	8.7%	R161P (CGC→CCC)	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,989,571	Δ1 bp	5.6%	coding (1952/2169 nt)	vgrG‑I ←	type VI secretion system protein
RA	2,993,334	A→G	7.5%	L374P (CTG→CCG)	PP_2617 ←	hypothetical protein
RA	3,000,100	A→G	6.5%	C140R (TGC→CGC)	PP_2623 ←	hypothetical protein
RA	3,001,858	C→G	5.8%	A180G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,006,511	T→G	9.1%	F1017V (TTC→GTC)	PP_2627 →	membrane protein
RA	3,006,516	G→T	8.7%	L1018L (CTG→CTT)	PP_2627 →	membrane protein
RA	3,006,517	A→C	8.7%	K1019Q (AAG→CAG)	PP_2627 →	membrane protein
RA	3,006,522	C→A	9.3%	D1020E (GAC→GAA)	PP_2627 →	membrane protein
RA	3,021,073	A→T	7.3%	Q523L (CAG→CTG)	PP_2638 →	cellulose synthase operon protein C
RA	3,024,250	G→C	5.1%	intergenic (+22/+132)	dapA‑II → / ← PP_2640	4‑hydroxy‑tetrahydrodipicolinate synthase/GNAT family acetyltransferase
RA	3,024,258	G→C	5.3%	intergenic (+30/+124)	dapA‑II → / ← PP_2640	4‑hydroxy‑tetrahydrodipicolinate synthase/GNAT family acetyltransferase
RA	3,030,398:1	+C	7.5%	intergenic (+355/‑339)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,404	C→G	9.2%	intergenic (+361/‑333)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,407	C→G	9.5%	intergenic (+364/‑330)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,412	Δ1 bp	9.5%	intergenic (+369/‑325)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,456	C→G	8.7%	intergenic (+413/‑281)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,460	G→C	8.4%	intergenic (+417/‑277)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,463	G→C	8.5%	intergenic (+420/‑274)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,478	C→T	8.5%	intergenic (+435/‑259)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,034,672	A→G	6.4%	L187P (CTG→CCG)	PP_2647 ←	MFS transporter
RA	3,048,625	T→C	11.0%	intergenic (+37/‑259)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,628	T→C	12.0%	intergenic (+40/‑256)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,633	A→G	11.0%	intergenic (+45/‑251)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,647	G→T	11.7%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,648	A→C	14.1%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,662	C→T	9.5%	intergenic (+74/‑222)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,050,084:1	+C	8.2%	intergenic (+13/‑128)	PP_2662 → / → PP_2663	hypothetical protein/hypothetical protein
RA	3,050,088	Δ1 bp	8.7%	intergenic (+17/‑124)	PP_2662 → / → PP_2663	hypothetical protein/hypothetical protein
RA	3,053,266	T→C	6.0%	intergenic (+24/+22)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,057,001:1	+A	7.1%	coding (390/990 nt)	PP_2669 ←	outer membrane protein
RA	3,057,006	Δ1 bp	6.3%	coding (385/990 nt)	PP_2669 ←	outer membrane protein
RA	3,066,967	T→A	7.6%	intergenic (+134/‑38)	PP_2678 → / → qedH‑II	hydrolase/quinoprotein ethanol dehydrogenase
RA	3,069,219	G→A	6.0%	D89N (GAC→AAC)	aldB‑II →	aldehyde dehydrogenase
RA	3,080,456	C→T	5.7%	L129L (CTG→CTA)	PP_2690 ←	hypothetical protein
RA	3,089,083	Δ1 bp	6.0%	coding (113/510 nt)	PP_2697 ←	flavin reductase domain‑containing oxidoreductase
RA	3,104,210	A→T	7.0%	D232V (GAC→GTC)	PP_2714 →	sensor histidine kinase
RA	3,121,637	C→G	5.4%	G90A (GGC→GCC)	PP_2738 ←	putative Transcriptional regulator
RA	3,126,899	G→C	5.3%	A190G (GCC→GGC)	PP_2744 ←	ribose‑phosphate pyrophosphokinase family protein
RA	3,135,628	G→T	5.8%	E80* (GAG→TAG)	PP_2752 →	hypothetical protein
RA	3,137,695	C→T	12.4%	intergenic (+80/‑210)	PP_2753 → / → PP_2754	ABC transporter ATP‑binding protein/OprD family outer membrane porin
RA	3,137,696	A→G	12.3%	intergenic (+81/‑209)	PP_2753 → / → PP_2754	ABC transporter ATP‑binding protein/OprD family outer membrane porin
RA	3,144,952	T→C	6.6%	V106A (GTT→GCT)	PP_2760 →	ribose ABC transporter permease
RA	3,144,955	T→A	6.2%	V107D (GTC→GAC)	PP_2760 →	ribose ABC transporter permease
RA	3,144,958	G→A	7.2%	S108N (AGC→AAC)	PP_2760 →	ribose ABC transporter permease
RA	3,146,621	G→C	11.9%	intergenic (+14/+52)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,622	G→C	11.8%	intergenic (+15/+51)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,654	T→C	6.2%	intergenic (+47/+19)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,149,976	T→A	10.6%	L13M (TTG→ATG) ‡	PP_2766 →	long‑chain‑fatty acid‑‑CoA ligase‑like protein
RA	3,149,977	T→A	10.6%	L13* (TTG→TAG) ‡	PP_2766 →	long‑chain‑fatty acid‑‑CoA ligase‑like protein
RA	3,161,249	A→T	5.1%	Q26L (CAG→CTG)	PP_2776 →	homocysteine S‑methyltransferase family protein
RA	3,175,593	T→C	6.3%	I284T (ATC→ACC)	PP_2787 →	transporter
RA	3,183,371	G→T	7.4%	E330* (GAG→TAG) ‡	PP_2793 →	acyl‑CoA dehydrogenase family protein
RA	3,183,372	A→C	7.3%	E330A (GAG→GCG) ‡	PP_2793 →	acyl‑CoA dehydrogenase family protein
RA	3,186,501	G→A	6.8%	G25D (GGT→GAT) ‡	actP‑II →	acetate permease
RA	3,186,502	T→C	6.8%	G25G (GGT→GGC) ‡	actP‑II →	acetate permease
RA	3,217,808	G→T	5.6%	E185D (GAG→GAT)	oprJ →	outer membrane protein OprJ
RA	3,252,535	G→A	7.8%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,540	T→C	7.9%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,255,625	T→C	5.4%	L52L (CTA→CTG)	PP_2852 ←	sulfatase domain‑containing protein
RA	3,257,523	G→C	8.3%	A158G (GCC→GGC)	PP_2854 ←	hypothetical protein
RA	3,287,319	T→C	10.7%	intergenic (+17/+24)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,287,320	G→A	10.0%	intergenic (+18/+23)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,300,198:1	+C	5.7%	intergenic (+53/+29)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,300,205	T→A	5.4%	intergenic (+60/+22)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,300,206	T→A	6.2%	intergenic (+61/+21)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,304,806	A→G	8.0%	intergenic (+16/+16)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,304,807	C→G	8.2%	intergenic (+17/+15)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,304,808	C→T	8.2%	intergenic (+18/+14)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,334,996:1	+T	6.6%	coding (609/1704 nt)	PP_2932 ←	amidase family protein
RA	3,335,001	Δ1 bp	6.4%	coding (604/1704 nt)	PP_2932 ←	amidase family protein
RA	3,344,389	C→G	6.6%	Q261H (CAG→CAC)	PP_2941 ←	hypothetical protein
RA	3,349,933	G→A	5.4%	L129L (CTG→CTA)	PP_2945 →	two‑component system sensor histidine kinase/response regulator
RA	3,380,750	C→G	6.1%	Q127E (CAG→GAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,408,096:1	+T	5.1%	coding (491/615 nt)	PP_3021 ←	LysE family transporter
RA	3,408,101	G→A	5.8%	V162V (GTC→GTT)	PP_3021 ←	LysE family transporter
RA	3,425,093	T→C	7.3%	F43L (TTC→CTC)	PP_3040 →	holin
RA	3,435,965	G→A	5.7%	Q278Q (CAG→CAA)	gpJ →	baseplate/tail fiber protein
RA	3,435,966	T→C	5.8%	L279L (TTG→CTG)	gpJ →	baseplate/tail fiber protein
RA	3,446,589	G→A	5.8%	G314S (GGC→AGC)	gpD →	tail formation
RA	3,453,506	C→T	9.8%	intergenic (‑17/+96)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,453,523	A→G	7.0%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,460,269	Δ1 bp	5.9%	coding (136/1446 nt)	PP_3075 ←	transcriptional regulator
RA	3,460,273:1	+A	5.8%	coding (132/1446 nt)	PP_3075 ←	transcriptional regulator
RA	3,491,771	G→C	8.8%	L231V (CTG→GTG)	PP_3096 ←	hypothetical protein
RA	3,491,772	G→C	8.8%	H230Q (CAC→CAG)	PP_3096 ←	hypothetical protein
RA	3,507,789	T→G	15.9%	F32C (TTC→TGC) ‡	PP_3105 →	membrane protein
RA	3,507,790	C→A	15.6%	F32L (TTC→TTA) ‡	PP_3105 →	membrane protein
RA	3,520,124	T→A	7.4%	intergenic (+700/‑180)	PP_5580 → / → PP_5582	hypothetical protein/hypothetical protein
RA	3,532,796	C→T	9.2%	G144S (GGC→AGC)	PP_3121 ←	transcriptional regulator, LysR family
RA	3,534,805	T→G	10.4%	intergenic (+49/‑106)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,534,820	C→A	12.8%	intergenic (+64/‑91)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,541,345:1	+T	6.6%	coding (415/807 nt)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,541,352	Δ1 bp	6.4%	coding (422/807 nt)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,551,117	C→T	5.7%	Q76* (CAG→TAG) ‡	PP_3135 →	glycosyl transferase
RA	3,551,118	A→G	5.6%	Q76R (CAG→CGG) ‡	PP_3135 →	glycosyl transferase
RA	3,552,437	Δ1 bp	7.3%	coding (51/978 nt)	PP_3137 →	group 2 family glycosyl transferase
RA	3,552,442:1	+G	6.2%	coding (56/978 nt)	PP_3137 →	group 2 family glycosyl transferase
RA	3,571,717	Δ1 bp	8.3%	coding (703/867 nt)	yneJ →	LysR family DNA‑binding transcriptional regulator
RA	3,571,720:1	+G	8.5%	coding (706/867 nt)	yneJ →	LysR family DNA‑binding transcriptional regulator
RA	3,604,002	A→T	7.1%	L232Q (CTG→CAG)	PP_3179 ←	LysR family transcriptional regulator
RA	3,604,005	A→T	7.2%	L231Q (CTG→CAG)	PP_3179 ←	LysR family transcriptional regulator
RA	3,604,010	G→C	6.9%	H229Q (CAC→CAG)	PP_3179 ←	LysR family transcriptional regulator
RA	3,624,187	G→C	12.0%	intergenic (‑92/+81)	PP_3194 ← / ← PP_3195	hypothetical protein/hypothetical protein
RA	3,628,125	C→G	8.4%	intergenic (+11/‑129)	PP_3198 → / → PP_3199	2Fe‑2S ferredoxin/monooxygenase
RA	3,630,365	T→C	6.8%	W315R (TGG→CGG) ‡	PP_3200 →	hypothetical protein
RA	3,630,366	G→A	7.7%	W315* (TGG→TAG) ‡	PP_3200 →	hypothetical protein
RA	3,639,373	G→C	6.4%	V115L (GTG→CTG)	PP_3206 →	hypothetical protein
RA	3,644,991	C→T	9.8%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,644,994	A→G	10.0%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,651,399	C→T	5.2%	P80S (CCG→TCG)	PP_3217 →	aliphatic sulfonate‑binding protein
RA	3,661,419	C→T	6.5%	A107T (GCT→ACT)	PP_3225 ←	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	3,662,001	C→T	9.8%	L292L (CTG→CTA)	PP_3226 ←	acyl‑CoA dehydrogenase‑related protein
RA	3,686,486	G→T	5.3%	G284V (GGC→GTC)	PP_3251 →	hypothetical protein
RA	3,688,218	Δ1 bp	5.8%	coding (292/1107 nt)	PP_3253 →	carboxylate‑amine ligase
RA	3,688,223	G→T	6.5%	L99L (CTG→CTT)	PP_3253 →	carboxylate‑amine ligase
RA	3,688,230	A→C	5.8%	K102Q (AAG→CAG)	PP_3253 →	carboxylate‑amine ligase
RA	3,694,072	T→G	12.0%	R713R (CGA→CGC) ‡	ligD ←	DNA ligase D
RA	3,694,073	C→A	12.0%	R713L (CGA→CTA) ‡	ligD ←	DNA ligase D
RA	3,711,943	G→A	6.3%	A27A (GCC→GCT)	paaB ←	ring 1,2‑phenylacetyl‑CoA epoxidase regulatory subunit
RA	3,713,613	A→T	6.3%	L315Q (CTG→CAG)	paaK ←	phenylacetate‑CoA ligase
RA	3,713,616	A→T	6.4%	L314Q (CTG→CAG)	paaK ←	phenylacetate‑CoA ligase
RA	3,726,458	T→G	10.4%	F356L (TTT→TTG)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,726,459	C→A	10.4%	Q357K (CAA→AAA)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,753,155	G→C	6.6%	R257R (CGC→CGG)	PP_3316 ←	chaperone‑associated ATPase
RA	3,753,162	G→C	5.7%	A255G (GCC→GGC)	PP_3316 ←	chaperone‑associated ATPase
RA	3,760,027	T→C	6.5%	L206P (CTG→CCG) ‡	folEB →	GTP cyclohydrolase I
RA	3,760,028	G→A	6.4%	L206L (CTG→CTA) ‡	folEB →	GTP cyclohydrolase I
RA	3,762,985	A→T	5.1%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,762,990	A→T	5.7%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein
RA	3,763,001	Δ1 bp	7.7%	coding (201/723 nt)	PP_3326 →	hypothetical protein
RA	3,763,545	A→G	7.4%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,547	G→C	7.4%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,549	C→T	7.4%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,778,612	C→T	5.6%	V541V (GTC→GTT)	PP_3340 →	TonB‑dependent receptor
RA	3,778,613	A→G	5.7%	N542D (AAC→GAC)	PP_3340 →	TonB‑dependent receptor
RA	3,786,374	A→G	5.6%	L293P (CTG→CCG)	mhpT ←	3‑(3‑hydroxy‑phenyl)propionate transporter MhpT
RA	3,791,147	G→T	8.2%	G183V (GGC→GTC)	PP_3353 →	sulfatase‑modifying protein
RA	3,794,692	A→T	5.0%	L602Q (CTG→CAG)	fcs ←	feruloyl‑CoA‑synthetase
RA	3,794,695:1	+G	5.0%	coding (1802/1884 nt)	fcs ←	feruloyl‑CoA‑synthetase
RA	3,797,544	A→T	7.6%	C165S (TGC→AGC)	vdh ←	vanillin dehydrogenase
RA	3,797,549	A→T	7.8%	L163Q (CTG→CAG)	vdh ←	vanillin dehydrogenase
RA	3,809,875	T→A	10.6%	intergenic (‑134/‑52)	PP_3365 ← / → PP_3366	acetolactate synthase/LysR family transcriptional regulator
RA	3,812,702	A→G	6.6%	D328G (GAC→GGC)	PP_3368 →	MFS transporter
RA	3,812,705	T→A	5.7%	I329N (ATT→AAT)	PP_3368 →	MFS transporter
RA	3,812,708	C→T	5.6%	A330V (GCC→GTC)	PP_3368 →	MFS transporter
RA	3,814,889	C→T	8.3%	H325H (CAC→CAT)	yajO →	2‑carboxybenzaldehyde reductase
RA	3,837,836	A→G	9.3%	E463G (GAG→GGG)	PP_3388 →	hypothetical protein
RA	3,853,788	C→A	6.0%	intergenic (+27/+55)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,857,531	C→A	5.1%	P22H (CCT→CAT)	PP_3407 →	hypothetical protein
RA	3,857,532	Δ1 bp	5.1%	coding (66/231 nt)	PP_3407 →	hypothetical protein
RA	3,857,535	T→A	5.1%	A23A (GCT→GCA)	PP_3407 →	hypothetical protein
RA	3,857,537	T→G	6.2%	V24G (GTT→GGT)	PP_3407 →	hypothetical protein
RA	3,857,538:1	+A	5.2%	coding (72/231 nt)	PP_3407 →	hypothetical protein
RA	3,869,902	T→G	8.1%	E354A (GAG→GCG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,869,903	C→A	8.0%	E354* (GAG→TAG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,882,857	A→G	6.6%	intergenic (+56/‑169)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,882,868	C→T	6.6%	intergenic (+67/‑158)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,883,615	C→G	7.7%	A197G (GCC→GGC) ‡	PP_3428 →	TPR repeat‑containing protein
RA	3,883,616	C→G	7.8%	A197A (GCC→GCG) ‡	PP_3428 →	TPR repeat‑containing protein
RA	3,911,545	T→A	6.8%	W271R (TGG→AGG)	PP_3451 →	hypothetical protein
RA	3,914,733	C→G	6.3%	R33P (CGG→CCG)	PP_3454 ←	transcriptional regulator
RA	3,915,192	A→C	7.4%	Q39H (CAA→CAC)	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,915,193	G→T	6.0%	V40L (GTG→TTG)	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,928,464	C→T	5.8%	intergenic (+96/‑44)	peaE → / → PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
RA	3,960,565	A→T	10.0%	intergenic (‑137/‑192)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,962,626:1	+T	5.1%	coding (780/1152 nt)	PP_3492 →	acyl‑CoA dehydrogenase
RA	3,984,085	C→T	6.8%	intergenic (+35/+155)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	4,033,545	G→C	5.9%	T401T (ACC→ACG) ‡	PP_3556 ←	membrane protein
RA	4,033,546	G→C	5.8%	T401S (ACC→AGC) ‡	PP_3556 ←	membrane protein
RA	4,042,365	C→A	8.0%	L137I (CTC→ATC) ‡	PP_3563 →	hypothetical protein
RA	4,042,366	T→G	8.2%	L137R (CTC→CGC) ‡	PP_3563 →	hypothetical protein
RA	4,049,645	A→T	5.0%	K718* (AAG→TAG) ‡	quiA →	quinate dehydrogenase
RA	4,049,646	A→T	5.1%	K718M (AAG→ATG) ‡	quiA →	quinate dehydrogenase
RA	4,049,926	C→A	8.7%	intergenic (+15/‑86)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,951	A→G	22.6%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,954	C→G	25.0%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,957	C→T	25.0%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,052,980	C→T	5.2%	L58L (CTG→CTA)	PP_3572 ←	hypothetical protein
RA	4,054,230	C→G	6.1%	H254D (CAC→GAC)	PP_3573 →	monooxygenase
RA	4,054,237:1	+T	8.7%	coding (767/1320 nt)	PP_3573 →	monooxygenase
RA	4,054,242	Δ1 bp	8.6%	coding (772/1320 nt)	PP_3573 →	monooxygenase
RA	4,054,250	C→G	6.8%	V260V (GTC→GTG)	PP_3573 →	monooxygenase
RA	4,079,214	T→A	10.3%	E9D (GAA→GAT) ‡	sdaC ←	serine:H+ symport permease
RA	4,079,215	T→A	10.1%	E9V (GAA→GTA) ‡	sdaC ←	serine:H+ symport permease
RA	4,080,963	A→T	8.1%	intergenic (‑143/+20)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,080,964	A→T	8.0%	intergenic (‑144/+19)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,082,784	C→A	12.3%	L229M (CTG→ATG) ‡	PP_3592 →	RpiR family transcriptional regulator
RA	4,082,785	T→G	11.6%	L229R (CTG→CGG) ‡	PP_3592 →	RpiR family transcriptional regulator
RA	4,099,959	C→T	5.5%	A35T (GCC→ACC)	PP_3607 ←	membrane protein
RA	4,131,154	T→A	7.0%	intergenic (+22/+90)	PP_3634 → / ← PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
RA	4,131,155	T→A	7.0%	intergenic (+23/+89)	PP_3634 → / ← PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
RA	4,134,021	T→A	9.0%	A351A (GCA→GCT) ‡	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,134,023	C→G	8.5%	A351P (GCA→CCA) ‡	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,134,025	T→A	8.9%	Q350L (CAG→CTG)	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,143,926	T→A	8.8%	intergenic (+35/‑88)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,143,927	T→A	8.8%	intergenic (+36/‑87)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,151,986	Δ1 bp	5.7%	intergenic (+132/+19)	PP_3655 → / ← PP_3656	cytosine/purine/uracil/thiamine/allantoin permease family protein/aromatic compound‑specific porin
RA	4,156,364	G→A	6.0%	D157D (GAC→GAT)	PP_3659 ←	transcriptional regulator, AraC family
RA	4,159,126	A→G	6.1%	intergenic (+30/‑179)	PP_3661 → / → PP_3662	membrane protein/hypothetical protein
RA	4,162,143	T→C	8.3%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,147	T→A	9.3%	intergenic (‑47/+30)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,148	T→A	8.4%	intergenic (‑48/+29)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,152	G→A	8.3%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,163,542	T→C	6.1%	intergenic (‑37/‑145)	pssA ← / → PP_3665	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator
RA	4,163,546	T→G	6.1%	intergenic (‑41/‑141)	pssA ← / → PP_3665	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator
RA	4,163,549	C→A	6.1%	intergenic (‑44/‑138)	pssA ← / → PP_3665	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator
RA	4,163,553	G→A	6.0%	intergenic (‑48/‑134)	pssA ← / → PP_3665	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator
RA	4,164,284	A→T	5.4%	K200* (AAG→TAG) ‡	PP_3665 →	AraC family transcriptional regulator
RA	4,164,285	A→T	5.4%	K200M (AAG→ATG) ‡	PP_3665 →	AraC family transcriptional regulator
RA	4,165,671	C→T	5.5%	G159R (GGG→AGG)	PP_3666 ←	MHS family metabolite MFS transporter
RA	4,170,494	C→A	6.6%	R58S (CGC→AGC)	PP_3669 →	LysR family transcriptional regulator
RA	4,180,099	C→A	7.8%	T154K (ACG→AAG)	PP_5610 →	hypothetical protein
RA	4,188,015:1	+A	8.3%	intergenic (+76/‑134)	PP_3683 → / → PP_3684	hypothetical protein/hypothetical protein
RA	4,188,018	Δ1 bp	7.9%	intergenic (+79/‑131)	PP_3683 → / → PP_3684	hypothetical protein/hypothetical protein
RA	4,207,746	A→T	7.7%	L25* (TTG→TAG) ‡	PP_3691 ←	DNA helicase‑related protein
RA	4,207,747	A→T	7.5%	L25M (TTG→ATG) ‡	PP_3691 ←	DNA helicase‑related protein
RA	4,238,061	G→A	6.1%	A78V (GCG→GTG)	catB ←	muconate cycloisomerase 1
RA	4,241,017	A→G	12.7%	I242I (ATT→ATC) ‡	PP_3718 ←	aminotransferase
RA	4,241,018	A→G	14.2%	I242T (ATT→ACT) ‡	PP_3718 ←	aminotransferase
RA	4,241,025	C→T	12.1%	V240M (GTG→ATG)	PP_3718 ←	aminotransferase
RA	4,241,026	C→T	12.4%	G239G (GGG→GGA)	PP_3718 ←	aminotransferase
RA	4,243,224	G→T	6.4%	F186L (TTC→TTA)	PP_3720 ←	NAD(P)H quinone oxidoreductase
RA	4,248,398	C→T	8.2%	R558H (CGC→CAC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,402	T→G	7.4%	M557L (ATG→CTG)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,403	C→A	8.0%	Q556H (CAG→CAT)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,407	A→G	7.9%	V555A (GTG→GCG)	PP_3724 ←	acyl‑CoA synthetase
RA	4,286,411	A→G	6.8%	V33A (GTC→GCC)	PP_3757 ←	chemotaxis protein CheY
RA	4,293,264	G→A	5.6%	intergenic (+36/+34)	PP_3762 → / ← PP_3763	two‑component system response regulator/precorrin‑6A synthase
RA	4,293,265	T→C	5.9%	intergenic (+37/+33)	PP_3762 → / ← PP_3763	two‑component system response regulator/precorrin‑6A synthase
RA	4,296,910	A→G	6.2%	intergenic (+33/‑65)	gloA → / → PP_3767	lactoylglutathione lyase/hypothetical protein
RA	4,296,911	C→T	6.2%	intergenic (+34/‑64)	gloA → / → PP_3767	lactoylglutathione lyase/hypothetical protein
RA	4,348,749	A→G	52.4%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,353,340	C→G	5.3%	P141R (CCG→CGG)	yrpB →	2‑nitropropane dioxygenase
RA	4,353,932	C→T	7.8%	H338H (CAC→CAT)	yrpB →	2‑nitropropane dioxygenase
RA	4,353,933	A→G	8.0%	M339V (ATG→GTG)	yrpB →	2‑nitropropane dioxygenase
RA	4,357,790	T→C	6.3%	intergenic (+92/‑162)	PP_3831 → / → PP_3832	hypothetical protein/CsrA‑like carbon storage regulator
RA	4,357,791	G→A	6.2%	intergenic (+93/‑161)	PP_3831 → / → PP_3832	hypothetical protein/CsrA‑like carbon storage regulator
RA	4,375,486	C→A	7.3%	A32S (GCG→TCG)	PP_5637 ←	hypothetical protein
RA	4,375,488	A→T	7.2%	V31D (GTC→GAC)	PP_5637 ←	hypothetical protein
RA	4,375,490	T→G	7.2%	R30R (CGA→CGC)	PP_5637 ←	hypothetical protein
RA	4,399,610	T→G	6.6%	R108R (CGA→CGC)	PP_3878 ←	minor capsid protein C
RA	4,406,396	A→G	5.6%	M66T (ATG→ACG)	PP_3888 ←	hypothetical protein
RA	4,419,564	A→C	5.5%	E96A (GAG→GCG)	PP_3910 →	hypothetical protein
RA	4,425,183	G→C	6.9%	intergenic (‑197/‑603)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,185	G→C	7.1%	intergenic (‑199/‑601)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,187	G→C	7.6%	intergenic (‑201/‑599)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,441,977	C→A	6.3%	A200S (GCG→TCG)	nicP‑II ←	porin‑like protein
RA	4,442,672	C→G	12.1%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,673	C→G	12.1%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,444,709	G→C	5.4%	A56G (GCC→GGC)	nicF ←	maleamate amidohydrolase
RA	4,445,294	C→G	7.1%	G117A (GGG→GCG) ‡	nicE ←	maleate isomerase
RA	4,445,295	C→G	7.0%	G117R (GGG→CGG) ‡	nicE ←	maleate isomerase
RA	4,447,882:1	+T	9.7%	intergenic (‑274/‑48)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,447,887	C→G	10.5%	intergenic (‑279/‑43)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,447,892	Δ1 bp	9.7%	intergenic (‑284/‑38)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,450,550	T→G	5.2%	V37G (GTG→GGG)	nicB →	nicotinate dehydrogenase subunit B
RA	4,474,635	G→T	6.3%	F315L (TTC→TTA)	PP_3964 ←	transposase
RA	4,479,221	G→C	10.6%	W176C (TGG→TGC)	ybdR →	Zn‑dependent oxidoreductase
RA	4,503,833	C→T	17.2%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,503,834	A→G	17.3%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,508,616	A→T	9.4%	L70Q (CTG→CAG)	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,508,623	C→T	7.9%	A68T (GCC→ACC)	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,520,860	C→T	7.2%	G308S (GGT→AGT)	icd ←	NADP(+)‑specific isocitrate dehydrogenase
RA	4,530,053	T→C	7.1%	intergenic (+15/‑153)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,069	T→A	16.7%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,070	T→A	15.7%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,535,346	T→C	6.5%	F207F (TTT→TTC)	PP_4022 →	hypothetical protein
RA	4,553,198:1	+A	5.0%	coding (1772/1797 nt)	PP_4041 ←	glycoside hydrolase
RA	4,554,543	G→T	8.3%	P143T (CCT→ACT)	PP_4041 ←	glycoside hydrolase
RA	4,554,548	G→T	7.9%	A141D (GCC→GAC)	PP_4041 ←	glycoside hydrolase
RA	4,554,551	A→C	8.4%	V140G (GTC→GGC)	PP_4041 ←	glycoside hydrolase
RA	4,554,556	A→C	7.7%	S138R (AGT→AGG)	PP_4041 ←	glycoside hydrolase
RA	4,557,073	T→G	7.9%	K150Q (AAG→CAG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,557,078	A→C	8.5%	L148R (CTG→CGG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,557,081	G→T	7.9%	P147Q (CCG→CAG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,557,086	C→A	8.5%	L145L (CTG→CTT)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,571,649	A→G	5.7%	D490G (GAC→GGC) ‡	treY →	maltooligosyl trehalose synthase
RA	4,571,650	C→T	5.9%	D490D (GAC→GAT) ‡	treY →	maltooligosyl trehalose synthase
RA	4,610,345	C→G	5.5%	A262A (GCC→GCG)	PP_4081 →	type IV/VI secretion system protein
RA	4,619,711	C→T	7.3%	intergenic (+934/‑1326)	PP_5652 → / → PP_5654	hypothetical protein/phosphotriesterase
RA	4,632,777	C→T	5.8%	A175T (GCC→ACC)	pgsA ←	CDP‑diacylglycerol‑glycerol‑3‑phosphate 3‑phosphatidyltransferase
RA	4,667,411	C→G	5.4%	A377A (GCC→GCG)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,667,414	C→G	5.2%	Y378* (TAC→TAG)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,673,595	G→C	7.8%	P107P (CCG→CCC)	PP_4137 →	outer membrane siderophore receptor
RA	4,673,596	G→C	7.8%	G108R (GGG→CGG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,673,597	G→C	7.8%	G108A (GGG→GCG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,705,459	T→A	10.2%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,460	T→A	10.3%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,716,383	A→C	5.5%	N523T (AAT→ACT)	PP_4173 →	two‑component system sensor histidine kinase/response regulator
RA	4,716,390	C→T	5.3%	V525V (GTC→GTT)	PP_4173 →	two‑component system sensor histidine kinase/response regulator
RA	4,716,391	A→G	5.3%	N526D (AAC→GAC)	PP_4173 →	two‑component system sensor histidine kinase/response regulator
RA	4,740,841	T→G	9.8%	intergenic (+32/+720)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,842	C→A	11.2%	intergenic (+33/+719)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,884	C→G	9.0%	intergenic (+75/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,886	T→A	9.5%	intergenic (+77/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,889	C→G	10.0%	intergenic (+80/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,273:1	+C	81.4%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	16.7%	intergenic (+465/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275	A→G	83.5%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275:1	+G	8.5%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	C→G	8.0%	intergenic (+467/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,277	C→T	100%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,279	C→T	8.6%	intergenic (+470/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280	C→T	91.9%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283	C→G	100%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,285	A→C	100%	intergenic (+476/+276)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,286	C→T	92.0%	intergenic (+477/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298:1	+T	45.5%	intergenic (+489/+263)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,299	C→T	54.4%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,301	A→C	53.7%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,302	A→G	45.5%	intergenic (+493/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,304	C→G	54.4%	intergenic (+495/+257)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,305	A→C	54.5%	intergenic (+496/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,758,181	G→C	6.5%	R470P (CGC→CCC)	ompQ →	outer membrane pyoverdine efflux protein
RA	4,758,186	G→C	6.2%	intergenic (+1/+20)	ompQ → / ← pvdP	outer membrane pyoverdine efflux protein/pyoverdine biosynthesis‑like protein
RA	4,760,260	T→G	6.3%	F93V (TTC→GTC)	pvdM →	dipeptidase
RA	4,760,265	C→A	6.2%	D94E (GAC→GAA)	pvdM →	dipeptidase
RA	4,783,141	G→A	6.3%	I1406I (ATC→ATT)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,800,263	Δ1 bp	7.0%	coding (220/471 nt)	PP_4227 ←	hypothetical protein
RA	4,806,160	A→T	9.3%	S593T (TCG→ACG)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,806,161	A→T	9.3%	R592R (CGT→CGA)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,820,281	C→A	8.2%	V3652F (GTC→TTC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,824,196	A→G	5.6%	F2347L (TTC→CTC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,824,197	C→T	6.0%	E2346E (GAG→GAA)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,824,317	G→C	8.8%	S2306R (AGC→AGG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,830,735	T→A	8.7%	D167V (GAC→GTC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,832,099	A→T	8.0%	intergenic (+29/+123)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,102	T→A	7.0%	intergenic (+32/+120)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,105	A→T	8.1%	intergenic (+35/+117)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,842,941	Δ1 bp	18.2%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,949:1	+G	20.7%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,850,203	C→T	7.2%	intergenic (+75/‑112)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,204	C→G	7.2%	intergenic (+76/‑111)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,205	A→G	7.1%	intergenic (+77/‑110)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,861,172	A→G	6.1%	intergenic (‑78/+159)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,889,631	C→A	7.5%	intergenic (+32/‑121)	hyi → / → glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
RA	4,891,918	G→A	7.4%	V345V (GTG→GTA)	ttuD →	hydroxypyruvate reductase
RA	4,891,919	T→C	7.6%	Y346H (TAC→CAC)	ttuD →	hydroxypyruvate reductase
RA	4,896,444	T→C	9.4%	intergenic (+32/‑176)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,512	A→G	7.9%	intergenic (+100/‑108)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,900,110	A→G	11.3%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,114	G→A	9.7%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,115	T→C	9.9%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,119	C→T	10.1%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,909,966	C→G	5.6%	intergenic (+314/+165)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,909,967	C→G	5.6%	intergenic (+315/+164)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,917,404	A→T	5.8%	F25I (TTC→ATC)	ccmA ←	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
RA	4,924,168	C→G	5.5%	E25Q (GAG→CAG)	PP_4333 ←	CheW domain‑containing protein
RA	4,924,175	C→G	7.1%	L22L (CTG→CTC)	PP_4333 ←	CheW domain‑containing protein
RA	4,936,671	G→C	7.9%	intergenic (‑37/‑381)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,936,673	G→C	8.1%	intergenic (‑39/‑379)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,936,675	G→C	8.1%	intergenic (‑41/‑377)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,951,017	T→G	13.0%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,951,018	C→A	13.0%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,956,638	C→A	5.5%	V54V (GTG→GTT)	fliI ←	flagellum‑specific ATP synthase
RA	4,970,038	T→G	6.8%	T84P (ACT→CCT)	fliC ←	flagellin
RA	4,970,049	C→A	6.4%	G80V (GGC→GTC)	fliC ←	flagellin
RA	4,984,780	Δ1 bp	5.6%	intergenic (‑33/+20)	cheR ← / ← PP_4393	chemotaxis protein methyltransferase/chemotaxis protein
RA	4,984,790:1	+T	8.8%	intergenic (‑43/+10)	cheR ← / ← PP_4393	chemotaxis protein methyltransferase/chemotaxis protein
RA	5,001,855	C→A	9.4%	intergenic (+1277/‑409)	PP_4407 → / → PP_4409	gamma‑aminobutyrate transporter/site‑specific recombinase
RA	5,029,037	C→T	7.2%	intergenic (+66/‑373)	PP_4432 → / → PP_4433	Xaa‑Pro aminopeptidase/amino acid MFS transporter
RA	5,029,042	A→G	7.0%	intergenic (+71/‑368)	PP_4432 → / → PP_4433	Xaa‑Pro aminopeptidase/amino acid MFS transporter
RA	5,051,348	C→T	8.0%	intergenic (‑240/+134)	PP_5687 ← / ← PP_4452	MFS transporter/NAD/NADP octopine/nopaline dehydrogenase family protein
RA	5,077,282	G→T	6.2%	intergenic (+29/+79)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,285	A→C	5.3%	intergenic (+32/+76)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,079,174	T→A	15.4%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,177	T→A	15.5%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,092,961	Δ1 bp	8.7%	coding (709/981 nt)	PP_4482 ←	AraC family transcriptional regulator
RA	5,092,962	Δ1 bp	8.7%	coding (708/981 nt)	PP_4482 ←	AraC family transcriptional regulator
RA	5,095,158	G→T	6.2%	F32L (TTC→TTA)	hisM ←	histidine/lysine/arginine/ornithine ABC transporter permease
RA	5,119,243	G→C	5.0%	L323L (CTG→CTC)	PP_4505 →	sensor histidine kinase
RA	5,119,244	G→C	5.5%	E324Q (GAG→CAG)	PP_4505 →	sensor histidine kinase
RA	5,131,424	T→C	5.5%	K10E (AAG→GAG)	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,180,060	C→G	6.1%	intergenic (‑240/‑43)	PP_4557 ← / → PP_4558	hypothetical protein/GNAT family acetyltransferase
RA	5,182,107	G→T	9.2%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,113	T→G	14.0%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,114	C→A	14.3%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,971	G→C	7.3%	H271D (CAT→GAT)	PP_4563 ←	hypothetical protein
RA	5,182,972	G→C	7.3%	I270M (ATC→ATG)	PP_4563 ←	hypothetical protein
RA	5,184,165	C→T	6.9%	A85V (GCC→GTC)	PP_4564 →	lipoprotein
RA	5,184,168	A→G	7.2%	D86G (GAC→GGC)	PP_4564 →	lipoprotein
RA	5,201,488	G→C	5.5%	F25L (TTC→TTG)	PP_4582 ←	membrane protein
RA	5,203,029	C→A	7.1%	L430M (CTG→ATG) ‡	PP_4583 →	putative Peptidase
RA	5,203,030	T→G	7.7%	L430R (CTG→CGG) ‡	PP_4583 →	putative Peptidase
RA	5,212,552	T→C	6.8%	intergenic (+68/+26)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,233,591	T→C	6.4%	V136A (GTC→GCC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,233,594	A→T	7.5%	D137V (GAC→GTC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,233,597	G→A	6.3%	G138D (GGC→GAC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,253,931	G→A	8.4%	R251C (CGC→TGC)	PP_4630 ←	MerR family transcriptional regulator
RA	5,253,935	G→C	9.2%	F249L (TTC→TTG)	PP_4630 ←	MerR family transcriptional regulator
RA	5,253,939	T→C	10.5%	H248R (CAC→CGC)	PP_4630 ←	MerR family transcriptional regulator
RA	5,257,737	A→C	5.3%	V38G (GTG→GGG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,744	G→C	5.0%	P36A (CCG→GCG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,745	G→C	5.2%	R35R (CGC→CGG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,258,460	G→T	5.5%	L249M (CTG→ATG)	PP_4635 ←	trans‑2‑enoyl‑CoA reductase
RA	5,268,999	T→A	8.1%	intergenic (+19/+17)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,269,000	T→A	7.8%	intergenic (+20/+16)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,313,324	C→G	10.7%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,313,327	C→G	10.9%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,332,293	C→G	11.1%	intergenic (+28/‑21)	dksA → / → gluQ	RNA polymerase‑binding transcription factor DksA/glutamyl‑Q tRNA(Asp) synthetase
RA	5,336,227	G→A	5.5%	R870H (CGC→CAC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,343,663	C→G	8.0%	I285M (ATC→ATG)	pgi‑II →	glucose 6‑phosphate isomerase
RA	5,343,667	C→A	6.7%	L287M (CTG→ATG) ‡	pgi‑II →	glucose 6‑phosphate isomerase
RA	5,343,668	T→G	6.6%	L287R (CTG→CGG) ‡	pgi‑II →	glucose 6‑phosphate isomerase
RA	5,343,672	C→G	6.6%	A288A (GCC→GCG)	pgi‑II →	glucose 6‑phosphate isomerase
RA	5,344,509:1	+C	9.8%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,509:2	+T	9.8%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,515	C→G	16.2%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,519	C→T	16.1%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,528	A→G	16.8%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,532	C→G	15.0%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,537	Δ1 bp	14.5%	intergenic (+64/‑114)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,538	Δ1 bp	14.5%	intergenic (+65/‑113)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,345,478	C→T	5.5%	G276G (GGC→GGT)	acsA‑II →	acetyl‑CoA synthetase
RA	5,351,390	A→C	6.6%	intergenic (+21/+55)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,351,393	G→T	6.5%	intergenic (+24/+52)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,352,025	G→T	7.4%	intergenic (‑230/+34)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,352,028	A→C	6.8%	intergenic (‑233/+31)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,384,575	G→C	8.3%	G331R (GGC→CGC) ‡	lldP →	L‑lactate permease
RA	5,384,576	G→C	7.1%	G331A (GGC→GCC) ‡	lldP →	L‑lactate permease
RA	5,396,403	T→A	5.4%	F278Y (TTC→TAC)	hsdM →	type I restriction modification system methylase
RA	5,417,431	C→T	9.3%	G101S (GGT→AGT)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,417,434	C→G	9.3%	A100P (GCG→CCG)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,417,437	A→G	9.0%	S99P (TCG→CCG)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,423,634	G→A	5.2%	intergenic (‑181/‑33)	PP_4763 ← / → PP_5712	acetyltransferase/hypothetical protein
RA	5,426,134	G→C	5.8%	G208R (GGC→CGC)	PP_4765 →	hypothetical protein
RA	5,426,138	G→C	5.9%	W209S (TGG→TCG) ‡	PP_4765 →	hypothetical protein
RA	5,426,139	G→C	6.0%	W209C (TGG→TGC) ‡	PP_4765 →	hypothetical protein
RA	5,426,143	G→C	6.2%	A211P (GCG→CCG)	PP_4765 →	hypothetical protein
RA	5,443,376:1	+C	6.0%	coding (1452/1989 nt)	PP_4781 ←	sensor histidine kinase
RA	5,443,382	Δ1 bp	5.9%	coding (1446/1989 nt)	PP_4781 ←	sensor histidine kinase
RA	5,453,160	T→C	16.7%	intergenic (+125/‑230)	lnt → / → PP_4791	apolipoprotein N‑acyltransferase/transposase
RA	5,453,167	G→T	20.5%	intergenic (+132/‑223)	lnt → / → PP_4791	apolipoprotein N‑acyltransferase/transposase
RA	5,453,168	G→A	17.3%	intergenic (+133/‑222)	lnt → / → PP_4791	apolipoprotein N‑acyltransferase/transposase
RA	5,453,169	T→C	17.6%	intergenic (+134/‑221)	lnt → / → PP_4791	apolipoprotein N‑acyltransferase/transposase
RA	5,453,170	A→C	17.3%	intergenic (+135/‑220)	lnt → / → PP_4791	apolipoprotein N‑acyltransferase/transposase
RA	5,453,177	G→A	33.5%	intergenic (+142/‑213)	lnt → / → PP_4791	apolipoprotein N‑acyltransferase/transposase
RA	5,458,940:1	+A	9.9%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,464,990	A→T	8.9%	L59Q (CTG→CAG)	lipB ←	octanoyltransferase
RA	5,464,993	A→T	8.8%	L58Q (CTG→CAG)	lipB ←	octanoyltransferase
RA	5,472,204	T→A	6.7%	K95M (AAG→ATG) ‡	rlmH ←	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH
RA	5,472,205	T→A	6.7%	K95* (AAG→TAG) ‡	rlmH ←	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH
RA	5,489,826:1	+C	9.1%	coding (260/597 nt)	PP_4825 →	MarC family membrane protein
RA	5,489,830	Δ1 bp	9.5%	coding (264/597 nt)	PP_4825 →	MarC family membrane protein
RA	5,492,598	A→G	6.0%	V489A (GTG→GCG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,492,607:1	+C	5.1%	coding (1457/1698 nt)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,492,612	C→T	5.9%	P484P (CCG→CCA)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,545,683	T→C	8.7%	intergenic (‑775/+102)	rpsF ← / ← rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,570,228	Δ1 bp	8.3%	coding (72/861 nt)	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,570,230:1	+A	8.3%	coding (70/861 nt)	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,582,067	C→A	5.4%	L351M (CTG→ATG)	PP_4910 →	hypothetical protein
RA	5,614,754	A→C	5.3%	I273M (ATT→ATG)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,757	G→T	5.8%	A272A (GCC→GCA)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,618,763	T→A	6.5%	intergenic (‑61/‑40)	wzy ← / → PP_4937	O‑antigen polymerase/toluene tolerance protein
RA	5,634,508	T→G	12.7%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,634,509	C→A	12.7%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,641,506	C→G	6.1%	S373C (TCC→TGC)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,641,511	C→G	7.4%	Q375E (CAG→GAG)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,651,425	T→G	7.5%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,428	C→A	8.4%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,655,677:1	+A	25.0%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,682	T→G	29.6%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,687	C→A	28.9%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,692	Δ1 bp	26.9%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,659,735	T→A	5.3%	L243Q (CTG→CAG)	metK →	methionine adenosyltransferase
RA	5,659,737	A→T	6.0%	T244S (ACT→TCT) ‡	metK →	methionine adenosyltransferase
RA	5,659,739	T→A	5.9%	T244T (ACT→ACA) ‡	metK →	methionine adenosyltransferase
RA	5,660,125	A→C	5.5%	D373A (GAC→GCC)	metK →	methionine adenosyltransferase
RA	5,660,233	G→T	6.4%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,236	A→C	5.9%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,685,665	T→G	10.9%	P428P (CCA→CCC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,670	T→C	9.2%	S427G (AGC→GGC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,671	G→A	10.2%	A426A (GCC→GCT)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,676	C→A	10.1%	G425W (GGG→TGG)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,689,782	A→T	6.0%	P56P (CCT→CCA)	pilH ←	twitching motility protein PilH
RA	5,732,025	A→T	5.8%	L196* (TTG→TAG) ‡	hutI ←	imidazolonepropionase
RA	5,732,026	A→T	5.7%	L196M (TTG→ATG) ‡	hutI ←	imidazolonepropionase
RA	5,740,523	T→G	12.5%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,526	A→T	12.9%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,527	A→T	12.9%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,530	C→A	13.9%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,741,564	A→T	5.8%	intergenic (‑179/+49)	PP_5038 ← / ← PP_5039	lipoprotein/hypothetical protein
RA	5,741,940	G→C	6.0%	D90E (GAC→GAG) ‡	PP_5039 ←	hypothetical protein
RA	5,741,941	T→G	6.0%	D90A (GAC→GCC) ‡	PP_5039 ←	hypothetical protein
RA	5,741,946	C→T	6.5%	E88E (GAG→GAA)	PP_5039 ←	hypothetical protein
RA	5,741,951	A→G	7.6%	F87L (TTC→CTC)	PP_5039 ←	hypothetical protein
RA	5,743,686	G→A	5.0%	Y745Y (TAC→TAT) ‡	glgP ←	glycogen phosphorylase
RA	5,743,687	T→C	5.0%	Y745C (TAC→TGC) ‡	glgP ←	glycogen phosphorylase
RA	5,748,358	G→T	5.9%	P560T (CCA→ACA)	typA ←	ribosome associated GTPase
RA	5,761,357	T→A	6.9%	L118Q (CTG→CAG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,360	T→A	6.9%	L119Q (CTG→CAG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,776,798	T→G	8.1%	T353T (ACT→ACG)	betA‑II →	choline dehydrogenase
RA	5,776,799	C→A	7.0%	R354S (CGT→AGT)	betA‑II →	choline dehydrogenase
RA	5,777,373	A→C	5.3%	K545T (AAG→ACG)	betA‑II →	choline dehydrogenase
RA	5,777,606	C→A	9.7%	Q675H (CAG→CAT) ‡	PP_5065 ←	hypothetical protein
RA	5,777,607	T→G	9.9%	Q675P (CAG→CCG) ‡	PP_5065 ←	hypothetical protein
RA	5,798,249	C→T	7.5%	intergenic (‑294/+80)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,254	T→C	9.7%	intergenic (‑299/+75)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,257	G→A	9.7%	intergenic (‑302/+72)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,262	A→G	8.9%	intergenic (‑307/+67)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,774	G→C	6.0%	A382G (GCC→GGC)	PP_5077 ←	hypothetical protein
RA	5,798,776	A→C	5.4%	P381P (CCT→CCG)	PP_5077 ←	hypothetical protein
RA	5,798,782	A→C	5.3%	P379P (CCT→CCG) ‡	PP_5077 ←	hypothetical protein
RA	5,798,783	G→T	5.3%	P379H (CCT→CAT) ‡	PP_5077 ←	hypothetical protein
RA	5,808,040	A→G	10.8%	intergenic (+119/+36)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,808,041	T→C	9.4%	intergenic (+120/+35)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,808,042	G→A	10.4%	intergenic (+121/+34)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,808,043	C→T	10.0%	intergenic (+122/+33)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,815,587	C→T	15.8%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,592	G→T	15.7%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,595	A→C	15.2%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,600	A→G	15.3%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,816,589	G→A	6.0%	D115N (GAC→AAC)	PP_5092 →	NLP/P60 protein
RA	5,816,899	C→T	8.4%	intergenic (+29/+100)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,816,909	A→G	12.1%	intergenic (+39/+90)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,821,669	C→T	5.2%	F78F (TTC→TTT)	metW →	methionine biosynthesis protein MetW
RA	5,821,953	T→A	6.1%	L173Q (CTG→CAG)	metW →	methionine biosynthesis protein MetW
RA	5,844,168	A→G	6.2%	D245G (GAC→GGC)	PP_5122 →	GMC family oxidoreductase
RA	5,844,171	C→T	6.2%	A246V (GCC→GTC)	PP_5122 →	GMC family oxidoreductase
RA	5,851,227	T→A	8.3%	intergenic (+34/+34)	ilvD → / ← PP_5129	dihydroxy‑acid dehydratase/hypothetical protein
RA	5,858,834	G→A	5.0%	A443T (GCT→ACT)	PP_5134 →	hypothetical protein
RA	5,864,241	G→T	6.9%	R656S (CGC→AGC)	cadA‑III ←	cadmium translocating P‑type ATPase
RA	5,864,246	A→C	6.5%	L654R (CTG→CGG)	cadA‑III ←	cadmium translocating P‑type ATPase
RA	5,866,753	A→C	6.4%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,874,875	G→T	5.8%	S451* (TCG→TAG) ‡	ilvA‑II ←	threonine deaminase
RA	5,874,876	A→C	6.5%	S451A (TCG→GCG) ‡	ilvA‑II ←	threonine deaminase
RA	5,886,820	C→G	8.0%	W84C (TGG→TGC)	PP_5161 ←	lysophospholipase
RA	5,886,825	C→G	7.4%	A83P (GCA→CCA)	PP_5161 ←	lysophospholipase
RA	5,897,829	G→A	6.4%	intergenic (‑173/+61)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,834	C→G	6.3%	intergenic (‑178/+56)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,835	G→C	6.2%	intergenic (‑179/+55)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,838	G→C	6.1%	intergenic (‑182/+52)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,839	C→G	6.0%	intergenic (‑183/+51)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,903,887	G→A	8.0%	intergenic (+87/+20)	PP_5176 → / ← spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
RA	5,914,167	G→A	9.3%	intergenic (+3/+150)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,180	C→T	10.7%	intergenic (+16/+137)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,182	C→G	10.7%	intergenic (+18/+135)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,184	A→G	10.8%	intergenic (+20/+133)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,918,445	T→A	7.2%	intergenic (+79/+16)	ygiF → / ← PP_5188	thiamine triphosphatase/AsnC/Lrp family transcriptional regulator
RA	5,918,446	T→A	7.2%	intergenic (+80/+15)	ygiF → / ← PP_5188	thiamine triphosphatase/AsnC/Lrp family transcriptional regulator
RA	5,928,771	G→A	5.9%	R112C (CGC→TGC)	fbpA ←	iron ABC transporter substrate‑binding protein
RA	5,928,776	T→C	6.1%	Q110R (CAG→CGG)	fbpA ←	iron ABC transporter substrate‑binding protein
RA	5,930,470	T→C	5.2%	K154E (AAG→GAG)	PP_5198 ←	hypothetical protein
RA	5,930,471	G→A	5.1%	L153L (CTC→CTT)	PP_5198 ←	hypothetical protein
RA	5,944,276	C→A	5.3%	M5I (ATG→ATT)	PP_5211 ←	ChaC‑related protein
RA	5,960,051	A→T	9.2%	noncoding (74/103 nt)	PP_mr63 ←	rnk_pseudo ncRNA
RA	5,960,052	A→T	9.1%	noncoding (73/103 nt)	PP_mr63 ←	rnk_pseudo ncRNA
RA	5,962,586	G→C	5.2%	V69V (GTG→GTC)	dapF →	diaminopimelate epimerase
RA	5,962,587	G→C	5.8%	D70H (GAC→CAC)	dapF →	diaminopimelate epimerase
RA	5,963,902	T→G	9.6%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,963,907	C→A	9.4%	I217I (ATC→ATA)	PP_5229 →	hypothetical protein
RA	5,966,388	A→T	6.5%	intergenic (‑401/+29)	PP_5232 ← / ← amtB	hypothetical protein/ammonium transporter AmtB
RA	5,966,389	A→T	8.0%	intergenic (‑402/+28)	PP_5232 ← / ← amtB	hypothetical protein/ammonium transporter AmtB
RA	5,988,865	G→A	26.6%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,875	T→C	27.9%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,880	C→T	26.9%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,881	G→T	27.0%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,882	C→T	25.7%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,885	A→G	26.7%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,891	G→C	26.4%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,893	C→G	27.5%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,896	C→T	27.5%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,900	C→G	29.7%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,904	C→T	27.2%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,906	C→T	27.2%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,945	C→A	32.5%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,950	C→T	29.3%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,951	A→G	29.3%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,961	T→C	28.1%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,967	Δ1 bp	25.7%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,997,245:1	+G	20.3%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,250	Δ1 bp	19.7%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,005,029	G→C	5.7%	intergenic (+11/‑165)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,043	T→G	12.1%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,050	G→C	17.2%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,053	A→T	15.6%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,056	G→C	14.3%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,063	C→A	7.4%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,021,756	T→G	6.4%	intergenic (‑51/‑93)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,021,757	C→A	6.4%	intergenic (‑52/‑92)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,040,850	T→A	8.5%	intergenic (+19/+15)	PP_5292 → / ← PP_5293	catabolite repression control protein/hypothetical protein
RA	6,042,393	G→C	5.5%	E92Q (GAA→CAA) ‡	PP_5295 →	hypothetical protein
RA	6,042,395	A→T	5.3%	E92D (GAA→GAT) ‡	PP_5295 →	hypothetical protein
RA	6,042,397	G→C	5.2%	C93S (TGC→TCC)	PP_5295 →	hypothetical protein
RA	6,043,722	T→A	7.2%	intergenic (+18/+16)	gmk → / ← PP_5297	deoxyguanylate kinase/guanylate kinase/amino acid transporter
RA	6,049,498	A→T	6.8%	K102* (AAG→TAG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,049,499	A→T	6.8%	K102M (AAG→ATG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,111,244	G→C	5.1%	P108A (CCA→GCA)	PP_5361 ←	protein P47K
RA	6,112,033	T→A	7.5%	H118Q (CAT→CAA)	PP_5362 →	hypothetical protein
RA	6,125,913	G→T	9.9%	G218W (GGG→TGG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,125,918	G→C	9.6%	L219L (CTG→CTC)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,125,923	A→C	10.0%	Q221P (CAG→CCG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,139,305	C→T	5.0%	L152L (CTG→TTG)	cusB →	CzcB family copper RND transporter membrane fusion protein
RA	6,173,262	C→T	5.5%	intergenic (‑125/+65)	PP_5410 ← / ← glmU	DeoR family transcriptional regulator/bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4808205	4808218	14	37 [0]	[0] 36	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 41794	70 (0.940)	4 (0.060)	4/228	NT	5.9%	intergenic (+36/‑263)	oprP/PP_0039	porin P/hypothetical protein
	?	NC_002947	= 41803	65 (0.970)					intergenic (+45/‑254)	oprP/PP_0039	porin P/hypothetical protein
*	?	NC_002947	85049 =	68 (0.910)	11 (0.170)	9/220	NT	13.9%	intergenic (+27/+103)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
	?	NC_002947	85122 =	77 (1.190)					intergenic (+100/+30)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
*	?	NC_002947	86750 =	72 (0.970)	9 (0.140)	6/222	NT	13.1%	intergenic (‑33/+112)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	86841 =	56 (0.860)					intergenic (‑124/+21)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	= 90357	95 (1.270)	5 (0.070)	5/230	NT	5.5%	intergenic (+32/+90)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
	?	NC_002947	= 90414	87 (1.290)					intergenic (+89/+33)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
*	?	NC_002947	171965 =	NA (NA)	3 (0.040)	3/240	NT	NA	noncoding (577/1522 nt)	PP_16SA	16S ribosomal RNA
	?	NC_002947	172008 =	NA (NA)					noncoding (620/1522 nt)	PP_16SA	16S ribosomal RNA
*	?	NC_002947	= 176399	NA (NA)	40 (0.560) +CGAAA	18/244	NT	37.6%	intergenic (+43/‑420)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 182013	69 (0.930)					intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
*	?	NC_002947	= 181541	NA (NA)	10 (0.140)	10/246	NT	NA	intergenic (+7/‑126)	PP_23SB/PP_r01	23S ribosomal RNA/5S ribosomal RNA
	?	NC_002947	= 529685	NA (NA)					intergenic (+18/‑102)	PP_23SC/PP_5SC	23S ribosomal RNA/5S ribosomal RNA
*	?	NC_002947	235331 =	79 (1.060)	11 (0.170)	8/222	NT	13.1%	intergenic (+28/+97)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	235390 =	77 (1.180)					intergenic (+87/+38)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	286683 =	77 (1.030)	5 (0.070)	4/244	NT	6.0%	coding (441/789 nt)	tauB‑II	taurine ABC transporter ATP‑binding protein
	?	NC_002947	286710 =	84 (1.170)					coding (414/789 nt)	tauB‑II	taurine ABC transporter ATP‑binding protein
*	?	NC_002947	= 316022	57 (0.760)	8 (0.120)	7/218	NT	13.6%	intergenic (+34/+49)	cysQ/PP_0262	3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein
	?	NC_002947	= 316034	53 (0.830)					intergenic (+46/+37)	cysQ/PP_0262	3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein
*	?	NC_002947	336209 =	27 (0.360)	6 (0.100)	5/200	NT	22.5%	intergenic (+54/+339)	PP_0278/PP_0279	hypothetical protein/hypothetical protein
	?	NC_002947	336329 =	20 (0.340)					intergenic (+174/+219)	PP_0278/PP_0279	hypothetical protein/hypothetical protein
*	?	NC_002947	337784 =	12 (0.160)	14 (0.240)	10/198	NT	56.7%	intergenic (‑31/+98)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
	?	NC_002947	337868 =	12 (0.210)					intergenic (‑115/+14)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
*	?	NC_002947	= 337811	14 (0.190)	13 (0.220)	12/198	NT	53.2%	intergenic (‑58/+71)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
	?	NC_002947	= 337839	12 (0.210)					intergenic (‑86/+43)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
*	?	NC_002947	= 363546	55 (0.740)	4 (0.060)	4/220	NT	7.2%	intergenic (‑61/+106)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
	?	NC_002947	= 363605	55 (0.850)					intergenic (‑120/+47)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
*	?	NC_002947	375245 =	79 (1.060)	4 (0.060)	4/242	NT	5.3%	coding (532/1233 nt)	PP_0312	electron transfer flavoprotein subunit alpha
	?	NC_002947	375282 =	68 (0.960)					coding (569/1233 nt)	PP_0312	electron transfer flavoprotein subunit alpha
*	?	NC_002947	= 380858	47 (0.630)	10 (0.160)	8/208	NT	17.0%	intergenic (+45/+64)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	= 380892	59 (0.970)					intergenic (+79/+30)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
*	?	NC_002947	413997 =	16 (0.210)	13 (0.220)	7/198	NT	46.0%	intergenic (+14/‑189)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	414083 =	18 (0.310)					intergenic (+100/‑103)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	= 414024	17 (0.230)	8 (0.140)	6/198	NT	33.9%	intergenic (+41/‑162)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	= 414054	18 (0.310)					intergenic (+71/‑132)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	442093 =	77 (1.030)	4 (0.060)	4/240	NT	5.5%	coding (971/1173 nt)	bioF	8‑amino‑7‑oxononanoate synthase
	?	NC_002947	442123 =	65 (0.920)					coding (1001/1173 nt)	bioF	8‑amino‑7‑oxononanoate synthase
*	?	NC_002947	448495 =	62 (0.830)	6 (0.080)	6/252	NT	8.9%	coding (1071/1284 nt)	PP_0369	diguanylate cyclase
	?	NC_002947	448536 =	62 (0.840)					coding (1112/1284 nt)	PP_0369	diguanylate cyclase
*	?	NC_002947	453412 =	54 (0.720)	3 (0.040)	3/242	NT	5.3%	intergenic (+46/‑102)	aruC/yqaE	acetylornithine aminotransferase/membrane protein
	?	NC_002947	453444 =	56 (0.790)					intergenic (+78/‑70)	aruC/yqaE	acetylornithine aminotransferase/membrane protein
*	?	NC_002947	478264 =	28 (0.380)	9 (0.160)	8/194	NT	31.9%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	17 (0.300)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	= 478293	29 (0.390)	4 (0.070)	4/194	NT	17.0%	intergenic (+38/+72)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	= 478328	17 (0.300)					intergenic (+73/+37)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	488229 =	85 (1.140)	5 (0.070)	5/238	NT	6.2%	coding (76/990 nt)	pdxA	4‑hydroxythreonine‑4‑phosphate dehydrogenase
	?	NC_002947	488276 =	72 (1.030)					coding (29/990 nt)	pdxA	4‑hydroxythreonine‑4‑phosphate dehydrogenase
*	?	NC_002947	= 495343	69 (0.930)	6 (0.090)	4/240	NT	8.2%	coding (694/999 nt)	PP_0408	hypothetical protein
	?	NC_002947	= 495360	69 (0.980)					coding (677/999 nt)	PP_0408	hypothetical protein
*	?	NC_002947	= 511921	57 (0.760)	8 (0.120)	8/224	NT	13.6%	intergenic (+58/‑90)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
	?	NC_002947	= 511969	51 (0.780)					intergenic (+106/‑42)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
*	?	NC_002947	511926 =	58 (0.780)	5 (0.070)	5/232	NT	8.7%	intergenic (+63/‑85)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
	?	NC_002947	511966 =	52 (0.760)					intergenic (+103/‑45)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
*	?	NC_002947	529670 =	42 (0.560)	17 (0.230)	9/254	NT	28.8%	intergenic (+3/‑117)	PP_23SC/PP_5SC	23S ribosomal RNA/5S ribosomal RNA
	?	NC_002947	1330248 =	NA (NA)					intergenic (+24/‑108)	PP_23SE/PP_5SE	23S ribosomal RNA/5S ribosomal RNA
*	?	NC_002947	= 652785	54 (0.720)	23 (0.370)	15/214	NT	50.3%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	0 (0.000)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
*	?	NC_002947	= 655945	64 (0.860)	4 (0.050)	4/248	NT	6.0%	coding (401/1356 nt)	PP_0563	two‑component system response regulator
	?	NC_002947	= 655976	63 (0.870)					coding (370/1356 nt)	PP_0563	two‑component system response regulator
*	?	NC_002947	= 668084	69 (0.930)	5 (0.080)	5/206	NT	8.3%	intergenic (+45/+107)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	= 668153	55 (0.910)					intergenic (+114/+38)	yfhM/PP_0571	lipoprotein/membrane protein
*	?	NC_002947	688878 =	83 (1.110)	5 (0.070)	4/244	NT	5.8%	intergenic (+371/‑80)	PP_5446/PP_0590	hypothetical protein/ArsR family transcriptional regulator
	?	NC_002947	688908 =	83 (1.160)					intergenic (+401/‑50)	PP_5446/PP_0590	hypothetical protein/ArsR family transcriptional regulator
*	?	NC_002947	713081 =	99 (1.330)	6 (0.080)	5/242	NT	6.0%	coding (67/531 nt)	lspA	lipoprotein signal peptidase
	?	NC_002947	713119 =	93 (1.310)					coding (105/531 nt)	lspA	lipoprotein signal peptidase
*	?	NC_002947	726900 =	52 (0.700)	7 (0.110)	5/226	NT	8.7%	intergenic (‑144/+123)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 5571457	101 (1.520)					intergenic (+28/+113)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
*	?	NC_002947	= 726912	54 (0.720)	6 (0.090)	4/226	NT	10.3%	intergenic (‑156/+111)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 726971	56 (0.840)					intergenic (‑215/+52)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 738613	65 (0.870)	4 (0.060)	4/230	NT	5.7%	coding (806/867 nt)	pilD	leader peptidase/N‑methyltransferase
	?	NC_002947	= 738643	73 (1.080)					coding (776/867 nt)	pilD	leader peptidase/N‑methyltransferase
*	?	NC_002947	= 760631	76 (1.020)	4 (0.060)	4/238	NT	5.4%	coding (912/1386 nt)	PP_0652	gluconate transporter
	?	NC_002947	= 760668	69 (0.990)					coding (875/1386 nt)	PP_0652	gluconate transporter
*	?	NC_002947	= 867935	70 (0.940)	6 (0.090)	4/228	NT	8.0%	intergenic (+30/+147)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	= 867999	75 (1.120)					intergenic (+94/+83)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	871173 =	77 (1.030)	7 (0.110)	7/224	NT	10.6%	intergenic (+18/+57)	PP_0753/PP_0754	lipoprotein/hypothetical protein
	?	NC_002947	871208 =	50 (0.760)					intergenic (+53/+22)	PP_0753/PP_0754	lipoprotein/hypothetical protein
*	?	NC_002947	875925 =	79 (1.060)	5 (0.070)	5/234	NT	7.1%	intergenic (‑31/+56)	PP_0760/PP_mr65	membrane protein/YybP‑YkoY
	?	NC_002947	875974 =	59 (0.860)					intergenic (‑80/+7)	PP_0760/PP_mr65	membrane protein/YybP‑YkoY
*	?	NC_002947	876436 =	71 (0.950)	4 (0.060)	3/242	NT	5.2%	coding (726/999 nt)	rsmC	16S rRNA methyltransferase
	?	NC_002947	876490 =	79 (1.110)					coding (672/999 nt)	rsmC	16S rRNA methyltransferase
*	?	NC_002947	894863 =	71 (0.950)	5 (0.070)	5/242	NT	7.0%	coding (183/483 nt)	PP_0777	glutathione peroxidase
	?	NC_002947	894892 =	66 (0.930)					coding (212/483 nt)	PP_0777	glutathione peroxidase
*	?	NC_002947	= 898173	57 (0.760)	7 (0.100)	6/238	NT	9.8%	coding (54/336 nt)	PP_0781	hypothetical protein
	?	NC_002947	= 4798980	75 (1.070)					coding (33/486 nt)	PP_4226	hypothetical protein
*	?	NC_002947	= 958882	56 (0.750)	5 (0.070)	3/244	NT	7.9%	coding (334/564 nt)	PP_0820	acetyltransferase
	?	NC_002947	= 958909	62 (0.870)					coding (361/564 nt)	PP_0820	acetyltransferase
*	?	NC_002947	1025270 =	33 (0.440)	4 (0.070)	3/200	NT	13.3%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1025363 =	26 (0.440)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 1025296	32 (0.430)	6 (0.100)	5/200	NT	19.0%	intergenic (‑147/+82)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	= 1025335	26 (0.440)					intergenic (‑186/+43)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 1037796	57 (0.760)	10 (0.160)	8/208	NT	16.3%	intergenic (+38/+78)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	= 1037828	56 (0.920)					intergenic (+70/+46)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	1064963 =	92 (1.230)	10 (0.140)	8/242	NT	10.5%	intergenic (+17/+96)	PP_0922/PP_0923	hypothetical protein/acyltransferase
	?	NC_002947	1065041 =	82 (1.150)					intergenic (+95/+18)	PP_0922/PP_0923	hypothetical protein/acyltransferase
*	?	NC_002947	= 1087589	74 (0.990)	5 (0.070)	4/246	NT	6.3%	coding (439/1359 nt)	pmbA	regulatory protease
	?	NC_002947	= 1087615	76 (1.050)					coding (465/1359 nt)	pmbA	regulatory protease
*	?	NC_002947	1102886 =	85 (1.140)	7 (0.100)	7/238	NT	8.3%	intergenic (+20/‑98)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
	?	NC_002947	1102932 =	76 (1.090)					intergenic (+66/‑52)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
*	?	NC_002947	1114875 =	43 (0.580)	8 (0.130)	6/204	NT	23.7%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114951 =	17 (0.280)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1150008 =	69 (0.930)	10 (0.140) +CTGG	6/246	NT	13.8%	intergenic (‑249/+8)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 2071280	60 (0.800)					intergenic (+189/+38)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
*	?	NC_002947	1156311 =	41 (0.550)	11 (0.170)	9/222	NT	24.2%	intergenic (+8/‑208)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
	?	NC_002947	1156418 =	33 (0.510)					intergenic (+115/‑101)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
*	?	NC_002947	1216187 =	72 (0.970)	4 (0.060)	4/238	NT	6.1%	coding (778/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1216232 =	55 (0.790)					coding (733/4305 nt)	PP_1061	ATP‑dependent DNA helicase
*	?	NC_002947	= 1262403	74 (0.990)	6 (0.080)	6/246	NT	7.2%	coding (238/1116 nt)	PP_1104	AotO‑related protein
	?	NC_002947	= 1262413	82 (1.140)					coding (228/1116 nt)	PP_1104	AotO‑related protein
*	?	NC_002947	1273256 =	75 (1.010)	5 (0.080)	5/224	NT	7.3%	intergenic (+41/+127)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
	?	NC_002947	1273345 =	61 (0.930)					intergenic (+130/+38)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
*	?	NC_002947	= 1273270	82 (1.100)	5 (0.080)	5/224	NT	7.0%	intergenic (+55/+113)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
	?	NC_002947	= 1273329	61 (0.930)					intergenic (+114/+54)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
*	?	NC_002947	= 1296905	NA (NA)	8 (0.110)	8/240	NT	NA	coding (87/1329 nt)	PP_1133	transposase
	?	NC_002947	= 1296920	NA (NA)					coding (102/1329 nt)	PP_1133	transposase
*	?	NC_002947	= 1298270	NA (NA)	3 (0.040)	3/248	NT	NA	intergenic (+123/+306)	PP_1133/PP_1134	transposase/hypothetical protein
	?	NC_002947	= 1298318	NA (NA)					intergenic (+171/+258)	PP_1133/PP_1134	transposase/hypothetical protein
*	?	NC_002947	= 1311725	44 (0.590)	6 (0.090)	6/228	NT	11.1%	intergenic (‑187/+91)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	= 1311784	57 (0.850)					intergenic (‑246/+32)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
*	?	NC_002947	1419553 =	17 (0.230)	10 (0.180)	10/190	NT	49.1%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	8 (0.140)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	14 (0.190)	7 (0.130)	7/190	NT	43.1%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	8 (0.140)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	1425650 =	86 (1.150)	9 (0.120)	6/254	NT	9.5%	intergenic (+45/‑460)	PP_1249/PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
	?	NC_002947	1429536 =	NA (NA)					intergenic (+46/‑434)	mqo‑II/PP_1252	malate:quinone oxidoreductase/group II intron‑encoding maturase
*	?	NC_002947	= 1425720	52 (0.700)	3 (0.040)	3/246	NT	6.0%	intergenic (+115/‑390)	PP_1249/PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
	?	NC_002947	= 1425741	44 (0.610)					intergenic (+136/‑369)	PP_1249/PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
*	?	NC_002947	= 1436023	74 (0.990)	5 (0.070)	5/242	NT	6.0%	intergenic (‑53/+100)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	= 1436102	85 (1.200)					intergenic (‑132/+21)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	1443111 =	66 (0.880)	9 (0.150)	9/204	NT	18.2%	intergenic (‑42/+134)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
	?	NC_002947	1443179 =	28 (0.470)					intergenic (‑110/+66)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
*	?	NC_002947	1451862 =	61 (0.820)	4 (0.060)	3/246	NT	5.4%	coding (17/1542 nt)	PP_1271	putative Multidrug efflux MFS transporter
	?	NC_002947	1451918 =	82 (1.140)					coding (73/1542 nt)	PP_1271	putative Multidrug efflux MFS transporter
*	?	NC_002947	1487013 =	17 (0.230)	7 (0.120)	4/194	NT	38.9%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	9 (0.160)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1487042	13 (0.170)	6 (0.110)	5/194	NT	38.8%	intergenic (+51/+79)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	= 1487072	9 (0.160)					intergenic (+81/+49)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1499465	32 (0.430)	8 (0.130)	6/208	NT	20.2%	intergenic (+35/‑131)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499502	37 (0.610)					intergenic (+72/‑94)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1510373 =	66 (0.880)	9 (0.130)	8/238	NT	12.6%	pseudogene (1236/1851 nt)	PP_1325	putative lipoprotein
	?	NC_002947	1510397 =	63 (0.900)					pseudogene (1212/1851 nt)	PP_1325	putative lipoprotein
*	?	NC_002947	= 1536281	58 (0.780)	4 (0.060)	4/234	NT	5.7%	intergenic (+30/‑126)	argJ/PP_1347	glutamate N‑acetyltransferase/amino acid acetyltransferase/glutathione S‑transferase family protein
	?	NC_002947	= 1536343	78 (1.140)					intergenic (+92/‑64)	argJ/PP_1347	glutamate N‑acetyltransferase/amino acid acetyltransferase/glutathione S‑transferase family protein
*	?	NC_002947	1553726 =	60 (0.800)	4 (0.060)	4/244	NT	6.3%	coding (287/474 nt)	PP_1364	hypothetical protein
	?	NC_002947	1553748 =	61 (0.850)					coding (309/474 nt)	PP_1364	hypothetical protein
*	?	NC_002947	= 1583554	51 (0.680)	4 (0.060)	4/242	NT	6.6%	intergenic (+68/+50)	ttgR/PP_1388	HTH‑type transcriptional regulator TtgR/EmrB/QacA family drug resistance transporter
	?	NC_002947	= 1583575	64 (0.900)					intergenic (+89/+29)	ttgR/PP_1388	HTH‑type transcriptional regulator TtgR/EmrB/QacA family drug resistance transporter
*	?	NC_002947	1615708 =	73 (0.980)	7 (0.100)	5/248	NT	9.3%	coding (86/1056 nt)	PP_1415	membrane protein
	?	NC_002947	1615757 =	65 (0.890)					coding (37/1056 nt)	PP_1415	membrane protein
*	?	NC_002947	= 1639493	71 (0.950)	4 (0.060)	4/234	NT	5.2%	intergenic (‑41/‑270)	czcR‑III/PP_1439	response regulator/hypothetical protein
	?	NC_002947	= 1639502	80 (1.160)					intergenic (‑50/‑261)	czcR‑III/PP_1439	response regulator/hypothetical protein
*	?	NC_002947	= 1651040	82 (1.100)	9 (0.130)	9/238	NT	10.4%	coding (62/2043 nt)	PP_1446	TonB‑dependent receptor
	?	NC_002947	= 1651049	78 (1.120)					coding (53/2043 nt)	PP_1446	TonB‑dependent receptor
*	?	NC_002947	= 1666839	77 (1.030)	6 (0.090)	4/222	NT	8.3%	intergenic (‑69/‑202)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
	?	NC_002947	= 1666868	65 (1.000)					intergenic (‑98/‑173)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
*	?	NC_002947	= 1731232	28 (0.380)	8 (0.140)	8/198	NT	21.7%	intergenic (‑103/+88)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1731268	36 (0.620)					intergenic (‑139/+52)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	1748731 =	60 (0.800)	6 (0.080)	6/242	NT	9.8%	intergenic (‑22/‑310)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
	?	NC_002947	1748774 =	53 (0.750)					intergenic (‑65/‑267)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1774997	54 (0.720)	4 (0.060)	4/240	NT	6.9%	coding (135/1077 nt)	PP_1582	hypothetical protein
	?	NC_002947	= 1775002	57 (0.810)					coding (140/1077 nt)	PP_1582	hypothetical protein
*	?	NC_002947	1780109 =	33 (0.440)	15 (0.240)	12/216	NT	41.6%	intergenic (+26/+80)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	1780171 =	14 (0.220)					intergenic (+88/+18)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	1781313 =	62 (0.830)	6 (0.080)	4/244	NT	9.4%	coding (73/1197 nt)	dapC	N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	1781342 =	56 (0.780)					coding (44/1197 nt)	dapC	N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	= 1799915	60 (0.800)	9 (0.150)	9/208	NT	15.1%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799957	52 (0.850)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	= 1811479	76 (1.020)	7 (0.110)	5/208	NT	9.8%	intergenic (+44/+84)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
	?	NC_002947	= 1811513	67 (1.100)					intergenic (+78/+50)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
*	?	NC_002947	1838113 =	85 (1.140)	12 (0.170)	10/234	NT	13.5%	intergenic (+18/+86)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	1838195 =	75 (1.090)					intergenic (+100/+4)	PP_1642/PP_1643	hypothetical protein/membrane protein
*	?	NC_002947	= 1899041	52 (0.700)	5 (0.090) +34 bp	10/186	NT	10.8%	intergenic (+69/‑451)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 2271840	61 (0.820)					intergenic (+5/‑137)	PP_t33/PP_t34	tRNA‑Asp/tRNA‑Asp
*	?	NC_002947	1899260 =	66 (0.880)	9 (0.140)	5/224	NT	13.7%	intergenic (+288/‑232)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899320 =	55 (0.840)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1917264 =	99 (1.330)	8 (0.120)	7/232	NT	8.3%	coding (1003/1083 nt)	PP_1718	EAL domain‑containing diguanylate phosphodiesterase
	?	NC_002947	1917343 =	87 (1.280)					coding (924/1083 nt)	PP_1718	EAL domain‑containing diguanylate phosphodiesterase
*	?	NC_002947	= 1936932	48 (0.640)	4 (0.060)	4/236	NT	8.5%	intergenic (+42/+48)	PP_1736/PP_1737	hypothetical protein/hypothetical protein
	?	NC_002947	= 1936953	41 (0.590)					intergenic (+63/+27)	PP_1736/PP_1737	hypothetical protein/hypothetical protein
*	?	NC_002947	1947818 =	65 (0.870)	4 (0.070)	4/202	NT	6.9%	intergenic (‑36/+134)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	1947937 =	56 (0.940)					intergenic (‑155/+15)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	1967188 =	7 (0.090)	13 (0.240)	6/188	NT	61.6%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	11 (0.200)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1967220	5 (0.070)	20 (0.360)	14/188	NT	73.1%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	11 (0.200)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1970782	51 (0.680)	9 (0.140)	8/214	NT	17.7%	intergenic (+33/‑233)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	= 1970844	41 (0.650)					intergenic (+95/‑171)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	2032853 =	NA (NA)	5 (0.070)	5/242	NT	24.7%	coding (291/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
	?	NC_002947	2032878 =	16 (0.210)					coding (316/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
*	?	NC_002947	2048837 =	59 (0.790)	9 (0.140)	8/220	NT	16.1%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048928 =	43 (0.670)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	= 2050638	24 (0.320)	6 (0.110)	3/180	NT	23.5%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050674	22 (0.420)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	2054349 =	77 (1.030)	4 (0.050)	4/250	NT	5.2%	coding (320/960 nt)	PP_1829	alpha/beta family hydrolase
	?	NC_002947	2054378 =	70 (0.950)					coding (291/960 nt)	PP_1829	alpha/beta family hydrolase
*	?	NC_002947	2063203 =	21 (0.280)	8 (0.130)	8/204	NT	28.6%	intergenic (+17/‑190)	PP_1838/PP_1839	membrane protein/hypothetical protein
	?	NC_002947	2063297 =	23 (0.380)					intergenic (+111/‑96)	PP_1838/PP_1839	membrane protein/hypothetical protein
*	?	NC_002947	= 2063227	22 (0.290)	7 (0.120)	7/204	NT	25.6%	intergenic (+41/‑166)	PP_1838/PP_1839	membrane protein/hypothetical protein
	?	NC_002947	= 2063271	23 (0.380)					intergenic (+85/‑122)	PP_1838/PP_1839	membrane protein/hypothetical protein
*	?	NC_002947	= 2069204	76 (1.020)	4 (0.050)	3/250	NT	5.1%	intergenic (+8/‑466)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
	?	NC_002947	= 2069240	75 (1.020)					intergenic (+44/‑430)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
*	?	NC_002947	= 2070381	NA (NA)	8 (0.110)	5/244	NT	NA	coding (712/1422 nt)	PP_1846	group II intron‑encoding maturase
	?	NC_002947	= 2070412	NA (NA)					coding (743/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	2086286 =	NA (NA)	3 (0.040)	3/238	NT	NA	coding (358/1302 nt)	PP_1865	transposase
	?	NC_002947	2086348 =	NA (NA)					coding (420/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2087064	NA (NA)	8 (0.110)	6/244	NT	NA	coding (1136/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2087083	NA (NA)					coding (1155/1302 nt)	PP_1865	transposase
*	?	NC_002947	2100003 =	33 (0.440)	16 (0.260)	8/208	NT	40.5%	intergenic (‑71/‑134)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2100098 =	20 (0.330)					intergenic (‑166/‑39)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2100025	31 (0.420)	13 (0.210)	9/208	NT	36.4%	intergenic (‑93/‑112)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2100074	20 (0.330)					intergenic (‑142/‑63)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2115091 =	56 (0.750)	3 (0.040)	3/236	NT	5.5%	coding (568/1806 nt)	PP_1883	hypothetical protein
	?	NC_002947	2115131 =	52 (0.750)					coding (608/1806 nt)	PP_1883	hypothetical protein
*	?	NC_002947	= 2202527	62 (0.830)	6 (0.090)	6/240	NT	9.2%	coding (161/990 nt)	PP_1947	hypothetical protein
	?	NC_002947	= 2202533	60 (0.850)					coding (167/990 nt)	PP_1947	hypothetical protein
*	?	NC_002947	2206873 =	68 (0.910)	4 (0.060)	4/244	NT	5.7%	coding (261/1179 nt)	PP_1950	hypothetical protein
	?	NC_002947	2206891 =	68 (0.950)					coding (279/1179 nt)	PP_1950	hypothetical protein
*	?	NC_002947	2247118 =	66 (0.880)	4 (0.060)	4/242	NT	6.1%	coding (2524/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
	?	NC_002947	2247154 =	61 (0.860)					coding (2488/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
*	?	NC_002947	= 2294436	90 (1.210)	6 (0.080)	6/242	NT	6.6%	coding (69/1131 nt)	ppgL	L‑alpha‑hydroxyglutaric acid gamma‑lactonase
	?	NC_002947	= 2294448	83 (1.170)					coding (81/1131 nt)	ppgL	L‑alpha‑hydroxyglutaric acid gamma‑lactonase
*	?	NC_002947	2295818 =	45 (0.600)	6 (0.100)	5/206	NT	13.4%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	41 (0.680)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2295841	47 (0.630)	11 (0.180)	6/206	NT	21.8%	intergenic (+44/+89)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	= 2295878	41 (0.680)					intergenic (+81/+52)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2301539 =	55 (0.740)	4 (0.060)	4/226	NT	8.6%	intergenic (‑140/‑191)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2301624 =	36 (0.540)					intergenic (‑225/‑106)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	2302335 =	78 (1.050)	6 (0.080)	6/242	NT	7.7%	coding (606/654 nt)	PP_5497	rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2302364 =	70 (0.990)					coding (635/654 nt)	PP_5497	rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	= 2303161	52 (0.700)	4 (0.060)	4/234	NT	7.1%	intergenic (‑203/+92)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
	?	NC_002947	= 2303221	56 (0.820)					intergenic (‑263/+32)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
*	?	NC_002947	2327708 =	62 (0.830)	4 (0.060)	4/240	NT	5.8%	coding (664/924 nt)	PP_2046	LysR family transcriptional regulator
	?	NC_002947	2327746 =	72 (1.020)					coding (626/924 nt)	PP_2046	LysR family transcriptional regulator
*	?	NC_002947	= 2365310	74 (0.990)	4 (0.060)	4/246	NT	5.3%	coding (175/1233 nt)	lysA‑I	diaminopimelate decarboxylase
	?	NC_002947	= 2365330	72 (1.000)					coding (155/1233 nt)	lysA‑I	diaminopimelate decarboxylase
*	?	NC_002947	= 2370897	67 (0.900)	4 (0.060)	3/236	NT	5.4%	coding (3672/4866 nt)	gdhB	NAD‑specific glutamate dehydrogenase
	?	NC_002947	= 2370939	77 (1.110)					coding (3714/4866 nt)	gdhB	NAD‑specific glutamate dehydrogenase
*	?	NC_002947	2414865 =	86 (1.150)	5 (0.070)	5/238	NT	6.6%	coding (20/198 nt)	PP_2115	hypothetical protein
	?	NC_002947	= 4022407	60 (0.860)					intergenic (‑58/+610)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	2434120 =	65 (0.870)	4 (0.060)	4/228	NT	6.4%	intergenic (+20/+88)	uup/PP_2132	ABC transporter ATP‑binding protein/universal stress protein
	?	NC_002947	2434194 =	59 (0.880)					intergenic (+94/+14)	uup/PP_2132	ABC transporter ATP‑binding protein/universal stress protein
*	?	NC_002947	2472145 =	26 (0.350)	4 (0.080)	4/176	NT	19.0%	intergenic (+6/+143)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
	?	NC_002947	2472269 =	16 (0.310)					intergenic (+130/+19)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
*	?	NC_002947	= 2472183	25 (0.340)	10 (0.190)	8/176	NT	37.5%	intergenic (+44/+105)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
	?	NC_002947	= 2472229	16 (0.310)					intergenic (+90/+59)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
*	?	NC_002947	= 2474183	22 (0.290)	9 (0.150)	10/208	NT	27.7%	intergenic (‑45/+135)	PP_2167/tal	PhoD‑like phosphatase/transaldolase
	?	NC_002947	= 2474205	29 (0.470)					intergenic (‑67/+113)	PP_2167/tal	PhoD‑like phosphatase/transaldolase
*	?	NC_002947	= 2494948	75 (1.010)	9 (0.120)	8/252	NT	12.0%	coding (114/618 nt)	PP_2188	tRNA 2‑methylthio‑N6‑isopentenyl adenosine(37) hydroxylase MiaE
	?	NC_002947	= 2494974	58 (0.780)					coding (140/618 nt)	PP_2188	tRNA 2‑methylthio‑N6‑isopentenyl adenosine(37) hydroxylase MiaE
*	?	NC_002947	= 2508934	68 (0.910)	8 (0.110)	6/248	NT	10.6%	coding (224/429 nt)	PP_2203	hypothetical protein
	?	NC_002947	= 2508963	68 (0.930)					coding (195/429 nt)	PP_2203	hypothetical protein
*	?	NC_002947	= 2529141	71 (0.950)	6 (0.080)	5/246	NT	7.8%	intergenic (+225/‑182)	PP_2217/PP_2218	enoyl‑CoA hydratase/transposase
	?	NC_002947	4909918 =	74 (1.020)					intergenic (+266/+213)	PP_4318/PP_4319	transposase/hypothetical protein
*	?	NC_002947	2533886 =	70 (0.940)	7 (0.100)	7/244	NT	9.7%	coding (264/489 nt)	mrpE	K(+)/H(+) antiporter subunit E
	?	NC_002947	2533925 =	63 (0.880)					coding (225/489 nt)	mrpE	K(+)/H(+) antiporter subunit E
*	?	NC_002947	= 2676223	66 (0.880)	4 (0.060)	4/242	NT	5.9%	intergenic (‑46/‑192)	PP_2344/PP_2345	hypothetical protein/hypothetical protein
	?	NC_002947	= 2676254	65 (0.910)					intergenic (‑77/‑161)	PP_2344/PP_2345	hypothetical protein/hypothetical protein
*	?	NC_002947	2744365 =	72 (0.970)	8 (0.120)	6/232	NT	11.4%	coding (687/834 nt)	PP_2398	hypothetical protein
	?	NC_002947	2744403 =	59 (0.870)					coding (725/834 nt)	PP_2398	hypothetical protein
*	?	NC_002947	= 2755123	56 (0.750)	4 (0.060)	7/240	NT	6.8%	coding (1406/3147 nt)	czcA‑II	cation efflux system protein
	?	NC_002947	= 2755134	56 (0.790)					coding (1417/3147 nt)	czcA‑II	cation efflux system protein
*	?	NC_002947	= 2801748	84 (1.130)	9 (0.120)	9/246	NT	10.1%	coding (89/1575 nt)	rbsA‑I	ribose ABC transporter ‑ ATP‑binding subunit
	?	NC_002947	= 2801807	79 (1.090)					coding (148/1575 nt)	rbsA‑I	ribose ABC transporter ‑ ATP‑binding subunit
*	?	NC_002947	2832716 =	69 (0.930)	7 (0.100)	6/240	NT	9.9%	intergenic (‑21/+46)	PP_2485/PP_2486	hypothetical protein/Oye family NADH‑dependent flavin oxidoreductase
	?	NC_002947	2832764 =	62 (0.880)					coding (1123/1125 nt)	PP_2486	Oye family NADH‑dependent flavin oxidoreductase
*	?	NC_002947	2914142 =	92 (1.230)	9 (0.130)	6/242	NT	10.4%	coding (3119/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
	?	NC_002947	2914170 =	67 (0.940)					coding (3147/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
*	?	NC_002947	2957115 =	45 (0.600)	11 (0.170)	9/224	NT	18.4%	intergenic (+27/‑169)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2957202 =	58 (0.880)					intergenic (+114/‑82)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	= 2957129	46 (0.620)	4 (0.060)	4/224	NT	7.5%	intergenic (+41/‑155)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	= 2957186	58 (0.880)					intergenic (+98/‑98)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	3013109 =	87 (1.170)	5 (0.070)	5/246	NT	5.6%	coding (302/708 nt)	PP_2634	cellulose synthase
	?	NC_002947	3013135 =	83 (1.150)					coding (328/708 nt)	PP_2634	cellulose synthase
*	?	NC_002947	= 3188199	64 (0.860)	6 (0.090)	6/238	NT	9.1%	intergenic (+113/+149)	actP‑II/PP_2798	acetate permease/oxidoreductase
	?	NC_002947	= 3188210	60 (0.860)					intergenic (+124/+138)	actP‑II/PP_2798	acetate permease/oxidoreductase
*	?	NC_002947	= 3259482	60 (0.800)	7 (0.100)	5/246	NT	10.5%	coding (753/1452 nt)	PP_2856	hypothetical protein
	?	NC_002947	= 3259516	61 (0.840)					coding (719/1452 nt)	PP_2856	hypothetical protein
*	?	NC_002947	3303921 =	75 (1.010)	4 (0.060)	5/240	NT	5.3%	coding (514/1383 nt)	cysS	cysteine‑‑tRNA ligase
	?	NC_002947	3303954 =	73 (1.040)					coding (547/1383 nt)	cysS	cysteine‑‑tRNA ligase
*	?	NC_002947	= 3323780	77 (1.030)	5 (0.070)	5/248	NT	6.3%	coding (156/858 nt)	PP_2923	hypothetical protein
	?	NC_002947	= 3323804	73 (1.000)					coding (132/858 nt)	PP_2923	hypothetical protein
*	?	NC_002947	3359983 =	94 (1.260)	6 (0.080)	6/248	NT	6.2%	coding (1327/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
	?	NC_002947	3360015 =	89 (1.220)					coding (1295/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
*	?	NC_002947	3391019 =	64 (0.860)	4 (0.060)	4/244	NT	6.2%	coding (186/1257 nt)	PP_2994	FMN‑binding oxidoreductase
	?	NC_002947	3391041 =	60 (0.840)					coding (208/1257 nt)	PP_2994	FMN‑binding oxidoreductase
*	?	NC_002947	= 3394863	47 (0.630)	4 (0.060)	4/246	NT	8.1%	coding (321/948 nt)	PP_2998	2‑dehydropantoate 2‑reductase
	?	NC_002947	= 3394881	45 (0.620)					coding (339/948 nt)	PP_2998	2‑dehydropantoate 2‑reductase
*	?	NC_002947	= 3409923	52 (0.700)	4 (0.060)	4/240	NT	7.5%	intergenic (‑446/‑90)	PP_3022/PP_3024	AraC family transcriptional regulator/hypothetical protein
	?	NC_002947	= 3409954	49 (0.700)					intergenic (‑477/‑59)	PP_3022/PP_3024	AraC family transcriptional regulator/hypothetical protein
*	?	NC_002947	3462272 =	75 (1.010)	6 (0.090)	5/230	NT	9.0%	coding (204/1059 nt)	PP_3077	ABC transporter permease
	?	NC_002947	3462398 =	54 (0.800)					coding (78/1059 nt)	PP_3077	ABC transporter permease
*	?	NC_002947	= 3513532	58 (0.780)	6 (0.080)	5/244	NT	9.2%	coding (2157/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	= 3513567	63 (0.880)					coding (2192/4158 nt)	PP_3108	rhs family protein
*	?	NC_002947	= 3523465	NA (NA)	6 (0.080)	3/242	NT	NA	coding (135/1533 nt)	PP_3114	transposase
	?	NC_002947	= 3523493	NA (NA)					coding (163/1533 nt)	PP_3114	transposase
*	?	NC_002947	= 3634824	104 (1.390)	10 (0.140)	8/248	NT	9.0%	coding (1179/2481 nt)	PP_3202	transporter
	?	NC_002947	= 3634872	100 (1.370)					coding (1227/2481 nt)	PP_3202	transporter
*	?	NC_002947	= 3649432	58 (0.780)	4 (0.060)	4/242	NT	6.1%	intergenic (+866/+825)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase
	?	NC_002947	= 3649458	67 (0.940)					intergenic (+892/+799)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase
*	?	NC_002947	3652905 =	54 (0.720)	6 (0.080)	5/242	NT	10.0%	coding (748/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase
	?	NC_002947	3652942 =	57 (0.800)					coding (785/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase
*	?	NC_002947	= 3676073	52 (0.700)	6 (0.090)	6/226	NT	10.9%	intergenic (+37/+55)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
	?	NC_002947	= 3676096	52 (0.780)					intergenic (+60/+32)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
*	?	NC_002947	= 3755057	58 (0.780)	3 (0.040)	3/240	NT	5.4%	coding (455/2202 nt)	PP_3319	GGDEF domain‑containing sensory box protein
	?	NC_002947	= 3755090	51 (0.720)					coding (488/2202 nt)	PP_3319	GGDEF domain‑containing sensory box protein
*	?	NC_002947	3772177 =	71 (0.950)	10 (0.150)	9/226	NT	14.9%	intergenic (+53/‑254)	PP_3331/PP_3332	membrane protein/cytochrome c‑type protein
	?	NC_002947	3772217 =	51 (0.770)					intergenic (+93/‑214)	PP_3331/PP_3332	membrane protein/cytochrome c‑type protein
*	?	NC_002947	= 3783860	60 (0.800)	5 (0.070)	5/238	NT	7.8%	coding (141/822 nt)	nikE	nickel ABC transporter ATP‑binding protein
	?	NC_002947	= 3783886	62 (0.890)					coding (167/822 nt)	nikE	nickel ABC transporter ATP‑binding protein
*	?	NC_002947	3793404 =	82 (1.100)	5 (0.070)	5/242	NT	6.3%	coding (1162/1191 nt)	PP_3355	beta‑ketothiolase
	?	NC_002947	3793444 =	71 (1.000)					coding (1122/1191 nt)	PP_3355	beta‑ketothiolase
*	?	NC_002947	3797037 =	85 (1.140)	5 (0.070)	5/242	NT	6.2%	coding (1000/1449 nt)	vdh	vanillin dehydrogenase
	?	NC_002947	3797067 =	70 (0.990)					coding (970/1449 nt)	vdh	vanillin dehydrogenase
*	?	NC_002947	3833927 =	86 (1.150)	9 (0.130)	8/240	NT	10.8%	coding (549/2178 nt)	vgrG‑II	type VI secretion system protein
	?	NC_002947	3833958 =	68 (0.960)					coding (580/2178 nt)	vgrG‑II	type VI secretion system protein
*	?	NC_002947	3850748 =	77 (1.030)	4 (0.060)	4/244	NT	5.1%	coding (186/474 nt)	PP_3398	curli fiber surface‑exposed nucleator CsgB
	?	NC_002947	3850804 =	75 (1.050)					coding (242/474 nt)	PP_3398	curli fiber surface‑exposed nucleator CsgB
*	?	NC_002947	3857518 =	74 (0.990)	8 (0.110)	7/248	NT	10.8%	coding (52/231 nt)	PP_3407	hypothetical protein
	?	NC_002947	3857549 =	60 (0.820)					coding (83/231 nt)	PP_3407	hypothetical protein
*	?	NC_002947	3928383 =	65 (0.870)	13 (0.200)	11/220	NT	21.4%	intergenic (+15/‑125)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
	?	NC_002947	3928464 =	39 (0.600)					intergenic (+96/‑44)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
*	?	NC_002947	3947957 =	27 (0.360)	10 (0.170)	8/198	NT	33.9%	coding (136/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	3948042 =	18 (0.310)					coding (51/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	3969448 =	NA (NA)	3 (0.040)	3/242	NT	NA	coding (39/321 nt)	PP_3499	transposase
	?	NC_002947	3969478 =	NA (NA)					coding (69/321 nt)	PP_3499	transposase
*	?	NC_002947	= 3976261	59 (0.790)	4 (0.060)	4/246	NT	6.2%	coding (651/1014 nt)	PP_3506	magnesium chelatase subunit ChII
	?	NC_002947	= 3976311	64 (0.890)					coding (601/1014 nt)	PP_3506	magnesium chelatase subunit ChII
*	?	NC_002947	= 4003395	100 (1.340)	6 (0.090)	5/240	NT	6.4%	intergenic (+9/+74)	PP_3531/PP_3532	hypothetical protein/AsnC family transcriptional regulator
	?	NC_002947	= 4003419	82 (1.160)					intergenic (+33/+50)	PP_3531/PP_3532	hypothetical protein/AsnC family transcriptional regulator
*	?	NC_002947	= 4075786	NA (NA)	56 (0.790)	45/240	NT	96.7%	intergenic (‑328/+113)	PP_3586/tpx	transposase/2‑Cys peroxiredoxin
	?	NC_002947	= 4957611	2 (0.030)					intergenic (‑49/+114)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
*	?	NC_002947	4104015 =	81 (1.090)	4 (0.060)	4/246	NT	5.0%	coding (510/2133 nt)	PP_3612	TonB‑dependent receptor
	?	NC_002947	4104035 =	73 (1.010)					coding (530/2133 nt)	PP_3612	TonB‑dependent receptor
*	?	NC_002947	4140183 =	67 (0.900)	5 (0.070)	4/238	NT	7.4%	intergenic (+31/‑234)	PP_3644/PP_5609	monooxygenase subunit/hypothetical protein
	?	NC_002947	4140222 =	63 (0.900)					intergenic (+70/‑195)	PP_3644/PP_5609	monooxygenase subunit/hypothetical protein
*	?	NC_002947	4159113 =	75 (1.010)	17 (0.250)	11/228	NT	19.4%	intergenic (+17/‑192)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4159201 =	74 (1.110)					intergenic (+105/‑104)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	4243577 =	84 (1.130)	4 (0.060)	4/240	NT	5.3%	coding (205/708 nt)	PP_3720	NAD(P)H quinone oxidoreductase
	?	NC_002947	4243615 =	63 (0.890)					coding (167/708 nt)	PP_3720	NAD(P)H quinone oxidoreductase
*	?	NC_002947	4282145 =	76 (1.020)	5 (0.070)	5/230	NT	7.5%	intergenic (‑678/+40)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator
	?	NC_002947	4282184 =	54 (0.800)					intergenic (‑717/+1)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator
*	?	NC_002947	4290153 =	87 (1.170)	6 (0.080)	4/246	NT	7.6%	coding (2478/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4290201 =	61 (0.840)					coding (2430/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 4393957	58 (0.780)	5 (0.070)	5/238	NT	7.7%	coding (1059/1488 nt)	PP_3869	sheath protein
	?	NC_002947	= 4393980	66 (0.940)					coding (1036/1488 nt)	PP_3869	sheath protein
*	?	NC_002947	= 4408241	70 (0.940)	4 (0.060)	4/244	NT	6.3%	coding (87/444 nt)	PP_3890	hypothetical protein
	?	NC_002947	= 4408301	51 (0.710)					coding (27/444 nt)	PP_3890	hypothetical protein
*	?	NC_002947	4418770 =	69 (0.930)	4 (0.060)	4/230	NT	6.4%	coding (242/351 nt)	PP_3908	hypothetical protein
	?	NC_002947	4418814 =	54 (0.800)					coding (286/351 nt)	PP_3908	hypothetical protein
*	?	NC_002947	= 4434003	60 (0.800)	4 (0.060)	4/236	NT	6.6%	intergenic (+107/‑56)	PP_3928/PP_3929	hypothetical protein/hypothetical protein
	?	NC_002947	= 4434029	58 (0.840)					intergenic (+133/‑30)	PP_3928/PP_3929	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4450521	102 (1.370)	10 (0.140)	7/252	NT	9.1%	coding (81/3564 nt)	nicB	nicotinate dehydrogenase subunit B
	?	NC_002947	= 4450550	98 (1.320)					coding (110/3564 nt)	nicB	nicotinate dehydrogenase subunit B
*	?	NC_002947	4524439 =	61 (0.820)	8 (0.120)	8/226	NT	13.2%	intergenic (+18/‑175)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
	?	NC_002947	4524474 =	51 (0.770)					intergenic (+53/‑140)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
*	?	NC_002947	4524512 =	65 (0.870)	6 (0.090)	4/226	NT	8.8%	intergenic (+91/‑102)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
	?	NC_002947	4524584 =	66 (0.990)					intergenic (+163/‑30)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
*	?	NC_002947	= 4533623	86 (1.150)	6 (0.090)	6/230	NT	6.7%	intergenic (+21/‑153)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
	?	NC_002947	= 4533688	88 (1.300)					intergenic (+86/‑88)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
*	?	NC_002947	= 4544318	77 (1.030)	4 (0.060)	4/246	NT	5.0%	coding (709/960 nt)	rnz	ribonuclease Z
	?	NC_002947	= 4544343	76 (1.050)					coding (734/960 nt)	rnz	ribonuclease Z
*	?	NC_002947	= 4556664	75 (1.010)	6 (0.080)	5/250	NT	8.3%	coding (857/984 nt)	gntZ	6‑phosphogluconate dehydrogenase
	?	NC_002947	= 4556694	58 (0.790)					coding (827/984 nt)	gntZ	6‑phosphogluconate dehydrogenase
*	?	NC_002947	= 4581829	71 (0.950)	4 (0.060)	4/240	NT	6.2%	coding (1643/3321 nt)	treSB	bifunctional trehalose synthase B/maltokinase
	?	NC_002947	= 4581871	53 (0.750)					coding (1601/3321 nt)	treSB	bifunctional trehalose synthase B/maltokinase
*	?	NC_002947	= 4583538	51 (0.680)	10 (0.160)	8/214	NT	17.7%	intergenic (‑67/+104)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	= 4583599	50 (0.800)					intergenic (‑128/+43)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	= 4586100	11 (0.150)	9 (0.170)	9/178	NT	41.2%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4586128	18 (0.340)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4593823	70 (0.940)	5 (0.080)	5/208	NT	7.3%	intergenic (+83/+216)	mccA/PP_4068	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha/Cro/CI family transcriptional regulator
	?	NC_002947	= 4593881	69 (1.130)					intergenic (+141/+158)	mccA/PP_4068	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha/Cro/CI family transcriptional regulator
*	?	NC_002947	= 4643020	70 (0.940)	4 (0.060)	4/236	NT	5.7%	intergenic (+20/‑160)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
	?	NC_002947	= 4643043	67 (0.970)					intergenic (+43/‑137)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
*	?	NC_002947	4647603 =	43 (0.580)	11 (0.210)	8/176	NT	33.4%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	14 (0.270)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4700803	86 (1.150)	6 (0.090)	4/226	NT	6.4%	intergenic (‑70/+80)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	= 4700847	98 (1.480)					intergenic (‑114/+36)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	= 4756994	82 (1.100)	5 (0.070)	4/248	NT	6.1%	coding (222/1413 nt)	ompQ	outer membrane pyoverdine efflux protein
	?	NC_002947	= 4757034	73 (1.000)					coding (262/1413 nt)	ompQ	outer membrane pyoverdine efflux protein
*	?	NC_002947	= 4758107	69 (0.930)	4 (0.060)	4/238	NT	5.4%	coding (1335/1413 nt)	ompQ	outer membrane pyoverdine efflux protein
	?	NC_002947	= 4758116	75 (1.070)					coding (1344/1413 nt)	ompQ	outer membrane pyoverdine efflux protein
*	?	NC_002947	4768688 =	77 (1.030)	4 (0.060)	4/240	NT	5.2%	coding (169/957 nt)	PP_4218	lipase/esterase family protein
	?	NC_002947	4768730 =	73 (1.040)					coding (127/957 nt)	PP_4218	lipase/esterase family protein
*	?	NC_002947	= 4775647	73 (0.980)	8 (0.110)	6/240	NT	10.2%	coding (3665/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	= 4775655	72 (1.020)					coding (3657/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	4806434 =	84 (1.130)	6 (0.080)	4/244	NT	7.2%	coding (1503/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
	?	NC_002947	4806461 =	74 (1.030)					coding (1476/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
*	?	NC_002947	4807837 =	65 (0.870)	5 (0.070)	5/244	NT	7.7%	coding (100/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
	?	NC_002947	4807878 =	58 (0.810)					coding (59/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
*	?	NC_002947	4808219 =	0 (0.000)	21 (0.390)	14/184	NT	51.2%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988991	40 (0.740)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4840527	56 (0.750)	3 (0.040)	3/242	NT	5.5%	coding (848/1443 nt)	ccoN‑II	cbb3‑type cytochrome c oxidase subunit 1
	?	NC_002947	= 4840567	49 (0.690)					coding (888/1443 nt)	ccoN‑II	cbb3‑type cytochrome c oxidase subunit 1
*	?	NC_002947	= 4848823	71 (0.950)	5 (0.070)	4/244	NT	6.3%	coding (78/1383 nt)	hemN	oxygen‑independent coproporphyrinogen III dehydrogenase
	?	NC_002947	= 4848848	81 (1.130)					coding (103/1383 nt)	hemN	oxygen‑independent coproporphyrinogen III dehydrogenase
*	?	NC_002947	= 4852498	25 (0.340)	5 (0.100)	5/172	NT	23.8%	intergenic (‑124/+173)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
	?	NC_002947	= 4852557	15 (0.300)					intergenic (‑183/+114)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
*	?	NC_002947	= 4854911	64 (0.860)	4 (0.060)	4/242	NT	5.8%	coding (235/2076 nt)	dnaX	DNA polymerase III subunit gamma
	?	NC_002947	= 4854943	69 (0.970)					coding (203/2076 nt)	dnaX	DNA polymerase III subunit gamma
*	?	NC_002947	4856141 =	50 (0.670)	7 (0.110)	6/226	NT	11.0%	intergenic (+68/+128)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	4856228 =	69 (1.040)					intergenic (+155/+41)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4856154	57 (0.760)	6 (0.090)	3/226	NT	9.1%	intergenic (+81/+115)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	= 4856213	69 (1.040)					intergenic (+140/+56)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4861197	82 (1.100)	21 (0.350)	11/204	NT	23.2%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	73 (1.220)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	= 4863096	72 (0.970)	4 (0.060)	4/240	NT	5.3%	coding (2822/3489 nt)	smc	chromosome partition protein Smc
	?	NC_002947	= 4863116	76 (1.080)					coding (2802/3489 nt)	smc	chromosome partition protein Smc
*	?	NC_002947	= 4879466	71 (0.950)	4 (0.060)	4/242	NT	5.6%	coding (31/1341 nt)	PP_4289	membrane protein
	?	NC_002947	= 4879479	66 (0.930)					coding (44/1341 nt)	PP_4289	membrane protein
*	?	NC_002947	= 4886209	16 (0.210)	7 (0.120)	5/196	NT	32.3%	intergenic (+43/+80)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 4886238	17 (0.300)					intergenic (+72/+51)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	4889614 =	50 (0.670)	7 (0.120)	4/200	NT	16.0%	intergenic (+15/‑138)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	4889705 =	34 (0.580)					intergenic (+106/‑47)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	4893598 =	63 (0.840)	6 (0.100)	6/200	NT	13.5%	intergenic (+28/‑180)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	4893677 =	27 (0.460)					intergenic (+107/‑101)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	4896423 =	69 (0.930)	16 (0.260)	8/212	NT	26.5%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4896512 =	31 (0.500)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4923020	76 (1.020)	4 (0.060)	4/242	NT	5.3%	coding (283/480 nt)	PP_4332	chemotaxis protein CheW
	?	NC_002947	= 4923029	71 (1.000)					coding (274/480 nt)	PP_4332	chemotaxis protein CheW
*	?	NC_002947	4933273 =	86 (1.150)	7 (0.100)	5/246	NT	7.9%	coding (1221/1308 nt)	flhF	flagellar biosynthesis protein FlhF
	?	NC_002947	4933312 =	79 (1.090)					coding (1182/1308 nt)	flhF	flagellar biosynthesis protein FlhF
*	?	NC_002947	4951546 =	78 (1.050)	6 (0.090)	5/238	NT	7.9%	coding (772/1266 nt)	fliK	flagellar hook‑length control protein FliK
	?	NC_002947	4951572 =	66 (0.940)					coding (746/1266 nt)	fliK	flagellar hook‑length control protein FliK
*	?	NC_002947	4957609 =	2 (0.030)	88 (1.210)	67/248	NT	97.8%	intergenic (‑47/+116)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
	?	NC_002947	5222979 =	NA (NA)					intergenic (‑342/+37)	PP_4602/PP_4603	AraC family transcriptional regulator/transposase
*	?	NC_002947	= 4978963	77 (1.030)	4 (0.060)	4/238	NT	5.4%	coding (504/786 nt)	flgG	flagellar basal‑body rod protein FlgG
	?	NC_002947	= 4978986	68 (0.970)					coding (481/786 nt)	flgG	flagellar basal‑body rod protein FlgG
*	?	NC_002947	4994034 =	87 (1.170)	6 (0.080)	4/242	NT	6.9%	coding (670/1020 nt)	bkdAB	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
	?	NC_002947	4994060 =	80 (1.130)					coding (696/1020 nt)	bkdAB	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
*	?	NC_002947	= 5012886	74 (0.990)	6 (0.090)	5/232	NT	7.8%	intergenic (‑200/‑342)	PP_5677/PP_5678	hypothetical protein/hypothetical protein
	?	NC_002947	= 5012897	74 (1.090)					intergenic (‑211/‑331)	PP_5677/PP_5678	hypothetical protein/hypothetical protein
*	?	NC_002947	5080231 =	86 (1.150)	6 (0.080)	6/244	NT	6.9%	intergenic (‑48/+120)	csrA/lysC	carbon storage regulator/aspartokinase
	?	NC_002947	5080262 =	79 (1.100)					intergenic (‑79/+89)	csrA/lysC	carbon storage regulator/aspartokinase
*	?	NC_002947	5112607 =	43 (0.580)	8 (0.130)	8/210	NT	18.3%	intergenic (‑148/+118)	rluB/PP_4497	23S rRNA pseudouridylate synthase B/hypothetical protein
	?	NC_002947	5112712 =	36 (0.580)					intergenic (‑253/+13)	rluB/PP_4497	23S rRNA pseudouridylate synthase B/hypothetical protein
*	?	NC_002947	5160427 =	55 (0.740)	3 (0.040)	3/238	NT	5.4%	coding (676/1212 nt)	PP_4543	hypothetical protein
	?	NC_002947	5160466 =	54 (0.770)					coding (637/1212 nt)	PP_4543	hypothetical protein
*	?	NC_002947	5162618 =	49 (0.660)	8 (0.130)	6/202	NT	18.6%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162702 =	31 (0.520)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5164490	70 (0.940)	5 (0.070)	5/244	NT	7.3%	coding (3438/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164525	59 (0.820)					coding (3403/3906 nt)	hrpA	ATP‑dependent helicase HrpA
*	?	NC_002947	= 5196440	80 (1.070)	5 (0.070)	5/234	NT	6.1%	coding (123/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	= 5196465	81 (1.180)					coding (98/690 nt)	ybgJ	allophanate hydrolase subunit 1
*	?	NC_002947	5201627 =	7 (0.090)	8 (0.150)	7/180	NT	59.3%	intergenic (‑65/‑115)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201722 =	6 (0.110)					intergenic (‑160/‑20)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5201663	5 (0.070)	15 (0.280)	11/180	NT	75.9%	intergenic (‑101/‑79)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	= 5201684	6 (0.110)					intergenic (‑122/‑58)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5208619	80 (1.070)	4 (0.060)	4/240	NT	5.0%	coding (138/933 nt)	PP_4589	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	= 5208647	76 (1.080)					coding (110/933 nt)	PP_4589	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	5210267 =	51 (0.680)	3 (0.050)	3/222	NT	6.3%	intergenic (‑85/+93)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	5210358 =	45 (0.690)					intergenic (‑176/+2)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	= 5210282	52 (0.700)	6 (0.090)	6/222	NT	11.7%	intergenic (‑100/+78)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	= 5210341	45 (0.690)					intergenic (‑159/+19)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	= 5219047	9 (0.120)	4 (0.060)	4/242	NT	31.8%	intergenic (+147/‑102)	PP_4598/PP_4599	membrane protein/transposase
	?	NC_002947	= 5219103	NA (NA)					intergenic (+203/‑46)	PP_4598/PP_4599	membrane protein/transposase
*	?	NC_002947	= 5228684	78 (1.050)	9 (0.120)	9/248	NT	11.4%	coding (423/2391 nt)	PP_4606	ferric siderophore receptor
	?	NC_002947	= 5228712	64 (0.880)					coding (395/2391 nt)	PP_4606	ferric siderophore receptor
*	?	NC_002947	= 5246704	67 (0.900)	4 (0.060)	4/246	NT	5.9%	coding (2005/3303 nt)	PP_4623	hypothetical protein
	?	NC_002947	= 5246740	63 (0.870)					coding (1969/3303 nt)	PP_4623	hypothetical protein
*	?	NC_002947	5280943 =	77 (1.030)	6 (0.100)	6/204	NT	10.4%	intergenic (+28/+110)	trmA/pcaG	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha
	?	NC_002947	5281029 =	42 (0.700)					intergenic (+114/+24)	trmA/pcaG	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha
*	?	NC_002947	= 5288471	26 (0.350)	9 (0.160)	8/194	NT	25.8%	intergenic (‑104/+80)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	= 5288505	32 (0.560)					intergenic (‑138/+46)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	5333243 =	54 (0.720)	7 (0.110)	7/224	NT	13.5%	intergenic (+27/‑216)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
	?	NC_002947	5333303 =	42 (0.640)					intergenic (+87/‑156)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
*	?	NC_002947	5340240 =	70 (0.940)	7 (0.100)	5/244	NT	9.8%	coding (41/480 nt)	folK	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
	?	NC_002947	5340263 =	62 (0.870)					coding (64/480 nt)	folK	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
*	?	NC_002947	5382446 =	8 (0.110)	4 (0.070)	3/184	NT	31.0%	intergenic (+18/+115)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	5382544 =	12 (0.220)					intergenic (+116/+17)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	= 5382480	7 (0.090)	8 (0.150)	7/184	NT	48.4%	intergenic (+52/+81)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	= 5382508	12 (0.220)					intergenic (+80/+53)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	5430445 =	100 (1.340)	6 (0.080)	4/244	NT	6.3%	intergenic (‑79/+82)	PP_4769/PP_4770	hypothetical protein/hypothetical protein
	?	NC_002947	5430481 =	83 (1.160)					intergenic (‑115/+46)	PP_4769/PP_4770	hypothetical protein/hypothetical protein
*	?	NC_002947	5443554 =	96 (1.290)	6 (0.090)	5/234	NT	7.0%	coding (1274/1989 nt)	PP_4781	sensor histidine kinase
	?	NC_002947	5443595 =	72 (1.050)					coding (1233/1989 nt)	PP_4781	sensor histidine kinase
*	?	NC_002947	= 5453186	3 (0.040)	8 (0.170) +48 bp	12/158	NT	30.7%	intergenic (+151/‑204)	lnt/PP_4791	apolipoprotein N‑acyltransferase/transposase
	?	NC_002947	5545674 =	55 (0.740)					intergenic (‑766/+111)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	5492594 =	73 (0.980)	5 (0.070)	4/246	NT	6.7%	coding (1470/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
	?	NC_002947	5492617 =	68 (0.940)					coding (1447/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
*	?	NC_002947	= 5537105	66 (0.880)	15 (0.260)	13/200	NT	21.3%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	59 (1.000)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	= 5537763	66 (0.880)	7 (0.100)	7/240	NT	10.2%	intergenic (‑140/‑208)	PP_4870/PP_4871	azurin/lysine decarboxylase family protein
	?	NC_002947	= 5537768	61 (0.870)					intergenic (‑145/‑203)	PP_4870/PP_4871	azurin/lysine decarboxylase family protein
*	?	NC_002947	5571529 =	101 (1.350)	5 (0.070) +C	4/252	NT	5.6%	intergenic (+100/+41)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
	?	NC_002947	5786543 =	68 (0.910)					intergenic (+30/‑101)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	5584582 =	77 (1.030)	5 (0.070)	5/242	NT	6.9%	coding (1201/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	5584605 =	62 (0.870)					coding (1178/2259 nt)	parC	DNA topoisomerase IV subunit A
*	?	NC_002947	5594143 =	22 (0.290)	5 (0.090)	5/198	NT	17.2%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594236 =	31 (0.530)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5594170	24 (0.320)	4 (0.070)	3/198	NT	13.9%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5594207	31 (0.530)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	5616257 =	68 (0.910)	4 (0.060)	4/244	NT	6.3%	coding (1255/1809 nt)	msbA	lipid A export ATP‑binding/permease MsbA
	?	NC_002947	5616292 =	53 (0.740)					coding (1220/1809 nt)	msbA	lipid A export ATP‑binding/permease MsbA
*	?	NC_002947	5628645 =	64 (0.860)	4 (0.060)	4/236	NT	6.2%	intergenic (‑64/+43)	rlmJ/putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
	?	NC_002947	5628678 =	62 (0.890)					intergenic (‑97/+10)	rlmJ/putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
*	?	NC_002947	5653263 =	77 (1.030)	6 (0.080)	5/254	NT	7.2%	coding (100/252 nt)	PP_4962	hypothetical protein
	?	NC_002947	5653302 =	77 (1.030)					coding (61/252 nt)	PP_4962	hypothetical protein
*	?	NC_002947	5671666 =	45 (0.600)	3 (0.050)	3/206	NT	8.8%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671751 =	26 (0.430)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5672886	58 (0.780)	6 (0.080)	6/250	NT	8.6%	coding (78/1881 nt)	rhlE‑II	ATP‑dependent RNA helicase
	?	NC_002947	= 5672919	70 (0.950)					coding (111/1881 nt)	rhlE‑II	ATP‑dependent RNA helicase
*	?	NC_002947	5680649 =	86 (1.150)	4 (0.060)	4/244	NT	5.3%	coding (653/720 nt)	rsmE	16S rRNA (uracil(1498)‑N(3))‑methyltransferase
	?	NC_002947	5680698 =	59 (0.820)					coding (702/720 nt)	rsmE	16S rRNA (uracil(1498)‑N(3))‑methyltransferase
*	?	NC_002947	5682433 =	68 (0.910)	7 (0.100)	7/238	NT	9.9%	coding (4516/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
	?	NC_002947	5682468 =	64 (0.920)					coding (4481/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
*	?	NC_002947	5698783 =	33 (0.440)	5 (0.080)	5/220	NT	13.2%	intergenic (+17/‑150)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5698866 =	37 (0.570)					intergenic (+100/‑67)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	= 5698799	36 (0.480)	9 (0.140)	8/220	NT	20.9%	intergenic (+33/‑134)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	= 5698848	37 (0.570)					intergenic (+82/‑85)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	= 5743376	74 (0.990)	6 (0.080)	5/250	NT	7.3%	intergenic (‑153/+94)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	= 5743460	80 (1.090)					intergenic (‑237/+10)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	5743378 =	73 (0.980)	11 (0.160)	8/236	NT	13.3%	intergenic (‑155/+92)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5743460 =	76 (1.100)					intergenic (‑237/+10)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	5751776 =	78 (1.050)	8 (0.110)	9/244	NT	10.5%	intergenic (‑158/‑313)	thiI/glnA	tRNA sulfurtransferase/glutamine synthetase
	?	NC_002947	5751802 =	61 (0.850)					intergenic (‑184/‑287)	thiI/glnA	tRNA sulfurtransferase/glutamine synthetase
*	?	NC_002947	5795530 =	89 (1.190)	5 (0.070)	4/242	NT	6.1%	coding (2426/4446 nt)	gltB	L‑glutamate synthase subunit alpha
	?	NC_002947	5795555 =	70 (0.990)					coding (2401/4446 nt)	gltB	L‑glutamate synthase subunit alpha
*	?	NC_002947	5816894 =	26 (0.350)	13 (0.180)	10/244	NT	26.5%	intergenic (+24/+105)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5816989 =	47 (0.660)					intergenic (+119/+10)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5816927	33 (0.440)	14 (0.220)	10/218	NT	31.0%	intergenic (+57/+72)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5816954	34 (0.530)					intergenic (+84/+45)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5825655	78 (1.050)	4 (0.060)	4/234	NT	5.2%	coding (696/813 nt)	thiG	thiazole synthase
	?	NC_002947	= 5825678	75 (1.090)					coding (673/813 nt)	thiG	thiazole synthase
*	?	NC_002947	= 5857778	100 (1.340)	6 (0.080)	6/242	NT	5.9%	coding (271/1371 nt)	PP_5134	hypothetical protein
	?	NC_002947	= 5857797	95 (1.340)					coding (290/1371 nt)	PP_5134	hypothetical protein
*	?	NC_002947	5870317 =	60 (0.800)	3 (0.050)	3/196	NT	7.0%	intergenic (+22/+112)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	5870410 =	33 (0.570)					intergenic (+115/+19)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	5877040 =	60 (0.800)	10 (0.170)	7/206	NT	17.3%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877122 =	47 (0.780)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	= 5877063	61 (0.820)	6 (0.100)	5/206	NT	11.1%	intergenic (+29/+76)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	= 5877097	47 (0.780)					intergenic (+63/+42)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	5903827 =	57 (0.760)	10 (0.150)	5/222	NT	15.8%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903887 =	57 (0.870)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	= 5903842	54 (0.720)	12 (0.180)	7/222	NT	18.7%	intergenic (+42/+65)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903870	57 (0.870)					intergenic (+70/+37)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5914213 =	23 (0.310)	8 (0.140)	6/198	NT	35.6%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914309 =	11 (0.190)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5914240	21 (0.280)	12 (0.210)	11/198	NT	46.7%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914280	11 (0.190)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	5927981 =	71 (0.950)	6 (0.090)	5/236	NT	8.4%	intergenic (‑31/+122)	PP_5195/fbpA	iron ABC transporter permease/iron ABC transporter substrate‑binding protein
	?	NC_002947	5928026 =	65 (0.940)					intergenic (‑76/+77)	PP_5195/fbpA	iron ABC transporter permease/iron ABC transporter substrate‑binding protein
*	?	NC_002947	= 5947618	79 (1.060)	4 (0.060)	4/246	NT	5.4%	coding (912/1260 nt)	rho	transcription termination factor Rho
	?	NC_002947	= 5947657	64 (0.890)					coding (873/1260 nt)	rho	transcription termination factor Rho
*	?	NC_002947	5985540 =	54 (0.720)	5 (0.070)	4/236	NT	9.3%	coding (112/405 nt)	PP_5244	AraC family transcriptional regulator
	?	NC_002947	5985574 =	47 (0.680)					coding (78/405 nt)	PP_5244	AraC family transcriptional regulator
*	?	NC_002947	= 5998019	81 (1.090)	10 (0.140)	10/240	NT	11.7%	coding (87/819 nt)	PP_5253	arylesterase
	?	NC_002947	= 5998045	75 (1.060)					coding (61/819 nt)	PP_5253	arylesterase
*	?	NC_002947	5999369 =	87 (1.170)	6 (0.090)	4/224	NT	8.2%	intergenic (‑168/‑153)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
	?	NC_002947	5999429 =	57 (0.870)					intergenic (‑228/‑93)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
*	?	NC_002947	6000959 =	69 (0.930)	5 (0.090)	5/194	NT	10.0%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6001053 =	37 (0.650)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	= 6006630	23 (0.310)	20 (0.370)	15/182	NT	52.3%	intergenic (+42/+57)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
	?	NC_002947	= 6006642	20 (0.370)					intergenic (+54/+45)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
*	?	NC_002947	= 6019326	58 (0.780)	5 (0.080)	5/208	NT	9.3%	intergenic (‑71/+74)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	= 6019356	50 (0.820)					intergenic (‑101/+44)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
*	?	NC_002947	6032808 =	44 (0.590)	8 (0.140)	6/188	NT	29.9%	intergenic (+16/+120)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
	?	NC_002947	6032890 =	5 (0.090)					intergenic (+98/+38)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
*	?	NC_002947	6078032 =	72 (0.970)	5 (0.070)	4/246	NT	6.2%	coding (1250/1290 nt)	PP_5330	MFS transporter
	?	NC_002947	6078076 =	82 (1.140)					coding (1206/1290 nt)	PP_5330	MFS transporter
*	?	NC_002947	6103551 =	66 (0.880)	4 (0.060)	4/246	NT	6.2%	coding (328/855 nt)	PP_5353	hypothetical protein
	?	NC_002947	6103622 =	57 (0.790)					coding (399/855 nt)	PP_5353	hypothetical protein
*	?	NC_002947	6128496 =	47 (0.630)	4 (0.060)	4/244	NT	8.5%	intergenic (‑556/‑366)	PP_5375/PP_5376	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	6128517 =	41 (0.570)					intergenic (‑577/‑345)	PP_5375/PP_5376	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	6129411 =	62 (0.830)	4 (0.060)	4/238	NT	6.7%	coding (306/456 nt)	PP_5377	hypothetical protein
	?	NC_002947	6129440 =	53 (0.760)					coding (277/456 nt)	PP_5377	hypothetical protein
*	?	NC_002947	6138099 =	70 (0.940)	5 (0.070)	5/246	NT	7.2%	coding (498/1254 nt)	czcC	CzcC family metal RND transporter outer membrane protein
	?	NC_002947	6138154 =	62 (0.860)					coding (553/1254 nt)	czcC	CzcC family metal RND transporter outer membrane protein
*	?	NC_002947	= 6179347	59 (0.790)	6 (0.080)	6/246	NT	9.9%	coding (345/537 nt)	atpH	ATP synthase subunit delta
	?	NC_002947	= 6179357	52 (0.720)					coding (335/537 nt)	atpH	ATP synthase subunit delta