breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	1,699	G→T	14.6%	P41Q (CCG→CAG)	parA ←	chromosome partition protein
RA	1,706	G→C	13.1%	L39V (CTC→GTC)	parA ←	chromosome partition protein
RA	1,707	G→C	12.8%	D38E (GAC→GAG)	parA ←	chromosome partition protein
RA	14,180	T→A	10.7%	L284Q (CTG→CAG)	gyrB →	DNA gyrase subunit B
RA	26,844	A→T	23.3%	intergenic (+40/+145)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	45,680	C→G	12.8%	intergenic (‑156/+47)	cadA‑I ← / ← PP_0042	cadmium translocating P‑type ATPase/hypothetical protein
RA	58,747	T→A	21.8%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	21.8%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,766	C→T	12.9%	intergenic (‑677/+11)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,340	G→T	15.5%	intergenic (+28/+147)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,342	A→T	15.5%	intergenic (+30/+145)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,344	A→C	15.5%	intergenic (+32/+143)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	70,755:1	+G	8.3%	coding (1150/2055 nt)	glyS ←	glycine‑tRNA ligase subunit beta
RA	70,759	G→C	7.6%	G382G (GGC→GGG)	glyS ←	glycine‑tRNA ligase subunit beta
RA	74,984	A→C	6.8%	I409S (ATT→AGT)	trkA ←	TrK potassium transporter NAD‑binding protein
RA	81,979	A→G	9.8%	I97V (ATC→GTC)	PP_0071 →	hypothetical protein
RA	81,984	G→C	10.0%	E98D (GAG→GAC)	PP_0071 →	hypothetical protein
RA	81,989	C→T	11.1%	T100M (ACG→ATG)	PP_0071 →	hypothetical protein
RA	86,240	G→T	11.7%	L160M (CTG→ATG)	PP_0075 ←	choline sulfate transporter
RA	86,245	A→C	11.7%	M158R (ATG→AGG)	PP_0075 ←	choline sulfate transporter
RA	87,493	T→A	15.0%	N98I (AAT→ATT)	PP_0076 ←	choline betaine‑binding protein
RA	92,900	G→C	7.3%	P232A (CCA→GCA)	trpB ←	tryptophan synthase subunit beta
RA	105,770	G→A	7.7%	V188V (GTG→GTA)	cynT →	carbonic anhydrase
RA	126,115	A→G	6.8%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	7.0%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	132,463	G→A	18.9%	intergenic (+37/‑115)	cc → / → dsbA	cytochrome c4/thiol:disulfide interchange protein
RA	132,467	G→C	17.4%	intergenic (+41/‑111)	cc → / → dsbA	cytochrome c4/thiol:disulfide interchange protein
RA	132,471	T→C	17.8%	intergenic (+45/‑107)	cc → / → dsbA	cytochrome c4/thiol:disulfide interchange protein
RA	146,127	T→A	9.0%	intergenic (+32/‑116)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	146,128	T→A	11.2%	intergenic (+33/‑115)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	155,543	G→T	13.9%	intergenic (‑248/+35)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	155,546	A→C	13.8%	intergenic (‑251/+32)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	160,310	C→T	10.1%	E27K (GAG→AAG)	PP_0149 ←	hypothetical protein
RA	160,311	A→G	9.6%	L26L (CTT→CTC)	PP_0149 ←	hypothetical protein
RA	162,271	A→C	6.8%	intergenic (‑305/+69)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	165,266	A→G	6.8%	I64T (ATC→ACC)	pntB ←	pyridine nucleotide transhydrogenase subunit beta
RA	181,943	C→T	24.7%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,034	Δ1 bp	10.8%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036:1	+C	10.8%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	192,705	C→A	8.4%	E271D (GAG→GAT)	paxB ←	toxin secretion ATP‑binding protein
RA	195,559	C→A	17.4%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	26.6%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	5.8%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	195,732	A→C	5.6%	N413T (AAC→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	29.5%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	31.8%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	41.2%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	30.2%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	9.5%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	21.2%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	9.3%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,179	A→G	5.1%	V895V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	14.4%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	24.2%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	21.6%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	19.4%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	14.9%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	200,598	C→G	7.1%	P2035R (CCG→CGG)	PP_0168 →	putative surface adhesion protein
RA	210,699	T→A	7.4%	L5402Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	211,900	T→A	6.1%	V5802V (GTT→GTA)	PP_0168 →	putative surface adhesion protein
RA	233,832	A→T	10.8%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	10.8%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	10.8%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	235,347	C→A	7.8%	intergenic (+44/+81)	PP_0183 → / ← argH	glutathione S‑transferase/argininosuccinate lyase
RA	235,347:1	+A	7.7%	intergenic (+44/+81)	PP_0183 → / ← argH	glutathione S‑transferase/argininosuccinate lyase
RA	235,390	G→A	7.1%	intergenic (+87/+38)	PP_0183 → / ← argH	glutathione S‑transferase/argininosuccinate lyase
RA	250,911	G→C	8.8%	R98G (CGC→GGC)	nfeD ←	membrane bound peptidase NefD
RA	250,912	G→C	8.7%	A97A (GCC→GCG)	nfeD ←	membrane bound peptidase NefD
RA	263,070	A→T	5.9%	intergenic (+305/‑180)	PP_0211 → / → gabD‑I	hypothetical protein/succinate‑semialdehyde dehydrogenase
RA	263,071	A→T	6.7%	intergenic (+306/‑179)	PP_0211 → / → gabD‑I	hypothetical protein/succinate‑semialdehyde dehydrogenase
RA	274,139	T→G	8.0%	K144T (AAG→ACG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,145	A→T	6.9%	L142Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,148	A→T	6.9%	L141Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,151	A→T	6.9%	L140Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,154	A→T	6.9%	L139Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	284,587	T→A	15.7%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	15.5%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	289,943	C→A	8.1%	intergenic (+26/‑140)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	289,945	G→C	8.2%	intergenic (+28/‑138)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	289,947	T→G	8.1%	intergenic (+30/‑136)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	292,607	C→G	6.9%	intergenic (+22/‑38)	ssuA → / → ssuD	aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase
RA	295,247	G→A	7.2%	G217E (GGG→GAG)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	295,250	T→C	5.7%	L218P (CTC→CCC)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	308,740	C→T	6.4%	intergenic (+1754/‑116)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	312,717	T→C	5.2%	Q166R (CAG→CGG)	fdhD ←	protein sulfur transferase
RA	313,851	T→C	6.9%	intergenic (+22/+29)	ygaU → / ← yrfG	murein cross‑linking regulator/purine nucleotidase
RA	322,135	G→A	12.9%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	11.5%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	337,812	A→G	18.9%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819:1	+A	18.9%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	19.4%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	16.7%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,828	G→T	17.5%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,830	Δ1 bp	17.5%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	23.4%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	344,035	A→G	16.5%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,044	Δ1 bp	17.7%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	18.3%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	353,800	A→T	6.6%	L178Q (CTG→CAG)	cbcV ←	choline/betaine/carnitine ABC transporter ATP binding protein
RA	358,583	C→A	7.5%	P16H (CCC→CAC)	gbdR →	AraC family transcriptional regulator
RA	374,742	G→T	8.6%	R10L (CGC→CTC)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	374,745	C→G	8.8%	A11G (GCC→GGC)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	374,748	A→C	8.3%	E12A (GAG→GCG)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	413,107	C→G	8.3%	A686A (GCC→GCG)	glnE →	glutamate‑ammonia‑ligase adenylyltransferase
RA	413,108	C→G	8.4%	R687G (CGC→GGC)	glnE →	glutamate‑ammonia‑ligase adenylyltransferase
RA	417,375	C→T	8.3%	P361L (CCG→CTG)	waaG →	lipopolysaccharide glucosyltransferase I
RA	417,378	A→G	7.0%	Q362R (CAG→CGG)	waaG →	lipopolysaccharide glucosyltransferase I
RA	418,298	C→G	13.9%	L26L (CTC→CTG)	PP_0345 →	heptose kinase WapP
RA	447,151	Δ1 bp	8.7%	intergenic (+28/‑274)	PP_0368 → / → PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
RA	447,155	T→G	8.6%	intergenic (+32/‑270)	PP_0368 → / → PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
RA	447,157	A→T	8.6%	intergenic (+34/‑268)	PP_0368 → / → PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
RA	447,159	C→A	8.6%	intergenic (+36/‑266)	PP_0368 → / → PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
RA	447,162:1	+C	8.8%	intergenic (+39/‑263)	PP_0368 → / → PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
RA	471,069	T→C	14.9%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,070	G→A	14.5%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	498,044	A→C	8.0%	D638A (GAT→GCT)	PP_0409 →	two‑component system sensor histidine kinase
RA	498,050	T→A	8.0%	L640Q (CTG→CAG)	PP_0409 →	two‑component system sensor histidine kinase
RA	498,056	G→T	10.0%	S642I (AGC→ATC)	PP_0409 →	two‑component system sensor histidine kinase
RA	508,774	Δ1 bp	7.2%	coding (240/1890 nt)	estP ←	esterase EstP
RA	508,778	A→T	7.1%	V79D (GTC→GAC)	estP ←	esterase EstP
RA	508,781:1	+G	7.2%	coding (233/1890 nt)	estP ←	esterase EstP
RA	524,352	G→C	14.4%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	13.6%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,368	C→T	13.6%	intergenic (+232/‑584)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,378	C→G	8.6%	intergenic (+242/‑574)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	541,440	A→G	7.3%	Q1272R (CAG→CGG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,443	C→T	7.0%	P1273L (CCG→CTG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	550,552	C→G	8.5%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	556,989	A→C	9.1%	K12T (AAG→ACG)	rpsN →	30S ribosomal protein S14
RA	556,992	G→T	8.9%	R13L (CGT→CTT)	rpsN →	30S ribosomal protein S14
RA	557,335	Δ1 bp	15.0%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,339:1	+A	15.4%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	564,380:1	+A	8.9%	intergenic (+29/‑144)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	564,385	Δ1 bp	8.9%	intergenic (+34/‑139)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	565,381	T→C	6.3%	Y286Y (TAT→TAC)	katA →	catalase
RA	571,217	G→C	8.9%	K62N (AAG→AAC)	ssb →	single‑stranded DNA‑binding protein
RA	571,620	G→A	10.5%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,621	T→C	10.4%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	584,238	T→A	10.9%	intergenic (+76/+31)	PP_t75 → / ← ansA	tRNA‑Sec/type 1 L‑asparaginase
RA	584,239	T→A	11.0%	intergenic (+77/+30)	PP_t75 → / ← ansA	tRNA‑Sec/type 1 L‑asparaginase
RA	584,247	A→C	7.2%	intergenic (+85/+22)	PP_t75 → / ← ansA	tRNA‑Sec/type 1 L‑asparaginase
RA	587,495	A→G	8.5%	N182D (AAC→GAC)	PP_0497 →	Cro/CI family transcriptional regulator
RA	605,115	A→C	5.4%	Q142P (CAG→CCG)	thiL →	thiamin monophosphate kinase
RA	605,124	G→A	7.8%	R145H (CGC→CAC)	thiL →	thiamin monophosphate kinase
RA	605,129	A→T	8.5%	S147C (AGC→TGC)	thiL →	thiamin monophosphate kinase
RA	605,134	T→C	7.4%	G148G (GGT→GGC)	thiL →	thiamin monophosphate kinase
RA	614,492	A→T	7.0%	L253Q (CTG→CAG)	ispA ←	farnesyl diphosphate synthase
RA	614,495	A→T	6.9%	L252Q (CTG→CAG)	ispA ←	farnesyl diphosphate synthase
RA	619,387	A→C	6.6%	L205R (CTG→CGG) ‡	pfeS‑I ←	histidine kinase
RA	619,388	G→C	5.7%	L205V (CTG→GTG) ‡	pfeS‑I ←	histidine kinase
RA	619,389	G→C	5.7%	P204P (CCC→CCG) ‡	pfeS‑I ←	histidine kinase
RA	619,390	G→T	5.7%	P204H (CCC→CAC) ‡	pfeS‑I ←	histidine kinase
RA	619,395:1	+A	5.7%	coding (606/1329 nt)	pfeS‑I ←	histidine kinase
RA	630,223	T→G	6.7%	intergenic (‑23/+24)	eutB ← / ← PP_0544	ethanolamine ammonia‑lyase subunit alpha/ethanolamine transporter
RA	630,224	T→C	6.5%	intergenic (‑24/+23)	eutB ← / ← PP_0544	ethanolamine ammonia‑lyase subunit alpha/ethanolamine transporter
RA	630,225	G→A	6.7%	intergenic (‑25/+22)	eutB ← / ← PP_0544	ethanolamine ammonia‑lyase subunit alpha/ethanolamine transporter
RA	630,226	C→A	7.7%	intergenic (‑26/+21)	eutB ← / ← PP_0544	ethanolamine ammonia‑lyase subunit alpha/ethanolamine transporter
RA	633,281	C→T	9.7%	A55T (GCC→ACC)	aldB‑I ←	aldehyde dehydrogenase
RA	644,549	C→G	8.2%	E157D (GAG→GAC)	acoA ←	acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit alpha
RA	648,250	A→T	7.6%	intergenic (+16/+75)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	652,770	G→C	9.2%	intergenic (‑104/+14)	dsbD‑I ← / ← ctpL	thiol/disulfide interchange protein 1/methyl‑accepting chemotaxis protein CtpL
RA	657,269	G→A	10.4%	S233N (AGC→AAC)	PP_0564 →	hypothetical protein
RA	657,272	T→C	10.2%	V234A (GTT→GCT)	PP_0564 →	hypothetical protein
RA	664,889	C→T	7.9%	A584A (GCC→GCT)	yfhM →	lipoprotein
RA	664,890	A→G	7.6%	S585G (AGC→GGC)	yfhM →	lipoprotein
RA	671,779	C→G	8.3%	S277R (AGC→AGG)	PP_0573 →	hypothetical protein
RA	671,780	T→G	8.5%	W278G (TGG→GGG)	PP_0573 →	hypothetical protein
RA	671,784	T→A	8.2%	L279Q (CTG→CAG)	PP_0573 →	hypothetical protein
RA	671,787	T→A	8.2%	L280Q (CTG→CAG)	PP_0573 →	hypothetical protein
RA	671,791	C→A	8.8%	P281P (CCC→CCA)	PP_0573 →	hypothetical protein
RA	671,792	C→G	8.9%	P282A (CCT→GCT)	PP_0573 →	hypothetical protein
RA	672,370	T→G	5.7%	G474G (GGT→GGG)	PP_0573 →	hypothetical protein
RA	675,592	C→G	7.3%	G37A (GGC→GCC)	PP_0577 ←	hypothetical protein
RA	675,594	A→T	7.3%	A36A (GCT→GCA)	PP_0577 ←	hypothetical protein
RA	680,674	C→T	9.4%	P64L (CCG→CTG)	PP_0583 →	AraC family transcriptional regulator
RA	680,677	A→G	8.5%	Q65R (CAG→CGG)	PP_0583 →	AraC family transcriptional regulator
RA	682,315	G→T	10.3%	P321T (CCG→ACG)	PP_0584 ←	methyl‑accepting chemotaxis transducer
RA	682,320	A→C	10.6%	V319G (GTG→GGG)	PP_0584 ←	methyl‑accepting chemotaxis transducer
RA	697,228	C→G	12.5%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	12.5%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	49.0%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,766:1	+G	10.0%	intergenic (+11/‑121)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,769	Δ1 bp	9.4%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	715,012:1	+T	13.5%	intergenic (+75/+2)	ispH → / ← PP_0607	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT
RA	715,019	Δ1 bp	15.0%	coding (478/483 nt)	PP_0607 ←	type IV pili biogenesis protein FimT
RA	727,318	C→T	7.7%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,319	A→T	7.3%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	727,320	A→G	7.5%	P5P (CCT→CCC)	PP_0621 ←	hypothetical protein
RA	727,935	C→A	5.8%	E145* (GAG→TAG)	bamD ←	outer membrane protein assembly factor BamD
RA	729,087	C→T	7.1%	H191H (CAC→CAT)	rluD →	23S rRNA pseudouridine(1911/1915/1917) synthase
RA	739,195	G→C	14.9%	A75G (GCG→GGG)	pilD ←	leader peptidase/N‑methyltransferase
RA	739,197	G→A	14.9%	C74C (TGC→TGT)	pilD ←	leader peptidase/N‑methyltransferase
RA	739,200	G→C	13.5%	H73Q (CAC→CAG)	pilD ←	leader peptidase/N‑methyltransferase
RA	739,203	T→C	13.7%	P72P (CCA→CCG) ‡	pilD ←	leader peptidase/N‑methyltransferase
RA	739,205	G→C	13.7%	P72A (CCA→GCA) ‡	pilD ←	leader peptidase/N‑methyltransferase
RA	741,501	G→T	7.8%	intergenic (+98/‑402)	PP_t12 → / → PP_0635	tRNA‑Thr/group II intron‑encoding maturase
RA	741,504	A→C	8.0%	intergenic (+101/‑399)	PP_t12 → / → PP_0635	tRNA‑Thr/group II intron‑encoding maturase
RA	743,453	T→C	12.2%	intergenic (+129/+145)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	770,931	G→A	9.1%	L204L (CTG→CTA)	PP_0662 →	threonine synthase
RA	780,561	T→A	8.8%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	787,191	C→G	6.3%	A102A (GCC→GCG)	ettA →	ADP/ATP ratio sensor/translation inhibitor
RA	787,192	C→G	6.3%	R103G (CGC→GGC)	ettA →	ADP/ATP ratio sensor/translation inhibitor
RA	794,952	T→A	6.6%	L364Q (CTG→CAG)	PP_0680 →	ATP‑dependent protease‑like protein
RA	794,955	T→A	6.3%	I365N (ATT→AAT)	PP_0680 →	ATP‑dependent protease‑like protein
RA	794,958	T→A	6.4%	L366Q (CTG→CAG)	PP_0680 →	ATP‑dependent protease‑like protein
RA	799,838	A→T	7.6%	L213Q (CTG→CAG)	ispB ←	octaprenyl diphosphate synthase
RA	821,682	G→C	10.8%	M350I (ATG→ATC)	PP_0707 →	hypothetical protein
RA	851,009	C→G	6.7%	intergenic (‑589/‑216)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	851,013	G→C	8.3%	intergenic (‑593/‑212)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	861,656	T→G	6.8%	S37R (AGT→CGT)	PP_0742 ←	hypothetical protein
RA	861,659	C→A	6.8%	G36C (GGC→TGC)	PP_0742 ←	hypothetical protein
RA	873,421	G→A	12.4%	G18S (GGC→AGC)	PP_5457 →	hypothetical protein
RA	873,428	T→C	12.0%	L20P (CTT→CCT)	PP_5457 →	hypothetical protein
RA	877,229	C→T	6.6%	R318H (CGC→CAC)	hprA ←	glycerate dehydrogenase
RA	883,809	T→G	8.7%	intergenic (+44/‑284)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	883,810	C→A	9.4%	intergenic (+45/‑283)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	895,213	G→C	6.9%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→A	6.6%	intergenic (+56/+8)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	907,510	Δ1 bp	11.9%	coding (704/777 nt)	yjjV ←	putative hydrolase
RA	907,515	A→T	11.6%	L233L (CTT→CTA) ‡	yjjV ←	putative hydrolase
RA	907,516	A→T	11.6%	L233H (CTT→CAT) ‡	yjjV ←	putative hydrolase
RA	912,426	G→T	8.1%	Q26H (CAG→CAT)	fruK →	1‑phosphofructokinase monomer
RA	920,954	G→A	7.4%	T267I (ACC→ATC)	PP_0802 ←	chemotaxis protein
RA	924,322	Δ1 bp	6.8%	coding (874/2169 nt)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	924,324:1	+A	6.8%	coding (872/2169 nt)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	945,386	C→T	7.5%	G80D (GGC→GAC)	PP_0806 ←	surface adhesion protein
RA	945,389	A→G	7.8%	V79A (GTC→GCC)	PP_0806 ←	surface adhesion protein
RA	955,152	A→G	21.8%	intergenic (+103/‑210)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,154	G→A	19.3%	intergenic (+105/‑208)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	T→A	20.0%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,156	T→C	21.4%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158	C→T	18.8%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	956,586	G→T	13.6%	intergenic (+16/‑98)	alaC → / → PP_0818	aminotransferase/hypothetical protein
RA	956,587	A→T	13.7%	intergenic (+17/‑97)	alaC → / → PP_0818	aminotransferase/hypothetical protein
RA	956,588	A→C	14.7%	intergenic (+18/‑96)	alaC → / → PP_0818	aminotransferase/hypothetical protein
RA	968,878	G→T	10.3%	intergenic (‑308/+23)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	968,881	A→C	12.2%	intergenic (‑311/+20)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	970,240	T→G	8.2%	F29C (TTC→TGC) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	970,241	C→A	8.0%	F29L (TTC→TTA) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	972,118	T→A	8.3%	L136Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	972,121	T→A	8.3%	L137Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	975,290	A→T	6.5%	intergenic (+136/+33)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	975,291	A→T	6.9%	intergenic (+137/+32)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	977,876	T→A	8.4%	intergenic (+39/‑141)	cysE → / → iscR	serine acetyltransferase/DNA‑binding transcriptional regulator IscR
RA	990,700	T→A	6.3%	L193Q (CTG→CAG)	PP_0856 →	lipoprotein
RA	991,560	T→C	8.1%	I60T (ATC→ACC)	der →	GTPase Der
RA	997,221	C→T	6.7%	L126L (CTG→CTA)	PP_0860 ←	sulfite reductase flavoprotein subunit
RA	1,004,529	A→T	10.5%	Q184L (CAG→CTG)	PP_0866 →	transmembrane sensor
RA	1,013,231	A→T	10.1%	intergenic (+56/+75)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,237	C→A	8.7%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,238	A→T	8.6%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,244	G→C	8.5%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,245	G→C	10.0%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,251	A→T	9.8%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,252	T→G	12.7%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,258	A→T	12.5%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,035,784	T→C	14.3%	intergenic (+30/+1)	PP_0893 → / ← PP_0894	ThiJ/PfpI family protein/hypothetical protein
RA	1,035,786	C→G	14.3%	*133S (TGA→TCA)	PP_0894 ←	hypothetical protein
RA	1,035,788	G→A	14.8%	A132A (GCC→GCT)	PP_0894 ←	hypothetical protein
RA	1,039,350	G→A	8.0%	A16A (GCC→GCT)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,357	G→C	8.5%	A14G (GCC→GGC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,043,691	A→C	6.5%	D27A (GAC→GCC)	PP_0903 →	hypothetical protein
RA	1,045,261	T→C	10.6%	intergenic (+31/+75)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,265	G→A	9.8%	intergenic (+35/+71)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,268	T→C	9.5%	intergenic (+38/+68)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,272	G→A	10.7%	intergenic (+42/+64)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,058,260	Δ1 bp	5.8%	intergenic (‑186/+34)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,058,264:1	+T	5.9%	intergenic (‑190/+30)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,060,099	Δ1 bp	12.3%	coding (242/891 nt)	iciA →	chromosome initiation inhibitor
RA	1,060,105:1	+T	12.7%	coding (248/891 nt)	iciA →	chromosome initiation inhibitor
RA	1,068,184	T→A	6.9%	L116Q (CTG→CAG)	PP_0926 →	membrane protein
RA	1,068,187	C→G	6.9%	A117G (GCC→GGC)	PP_0926 →	membrane protein
RA	1,068,190	T→A	7.0%	L118Q (CTG→CAG)	PP_0926 →	membrane protein
RA	1,068,338	C→T	9.7%	S167S (AGC→AGT)	PP_0926 →	membrane protein
RA	1,070,265	G→C	17.6%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	18.4%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,084,916	C→T	7.3%	L246L (CTG→TTG)	PP_0939 →	carbon‑nitrogen hydrolase family protein
RA	1,121,449	C→T	7.8%	V295V (GTC→GTT)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,450	A→G	7.9%	N296D (AAC→GAC)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,458	C→A	7.7%	R298R (CGC→CGA)	PP_0982 →	YjgP/YjgQ family permease
RA	1,129,437	A→T	9.7%	A40A (GCT→GCA)	gcvP‑I ←	glycine dehydrogenase
RA	1,134,095	A→T	11.6%	intergenic (+34/+44)	PP_0995 → / ← gltS	membrane protein/glutamate:sodium symporter
RA	1,147,968	G→T	8.2%	P34Q (CCG→CAG)	PP_1006 ←	heme receptor
RA	1,147,973	G→C	8.0%	S32R (AGC→AGG)	PP_1006 ←	heme receptor
RA	1,181,122	C→A	7.8%	P57T (CCA→ACA)	cumA →	multicopper oxidase
RA	1,185,728	C→A	8.9%	G309G (GGC→GGA)	purL →	phosphoribosylformylglycinamidine synthase
RA	1,185,729	T→G	9.1%	S310A (TCC→GCC)	purL →	phosphoribosylformylglycinamidine synthase
RA	1,202,860	A→C	9.2%	Q228P (CAG→CCG)	xcpY →	type II secretion pathway protein XcpY
RA	1,202,863	G→T	16.9%	R229L (CGG→CTG)	xcpY →	type II secretion pathway protein XcpY
RA	1,213,650	T→A	6.1%	A1105A (GCA→GCT)	PP_1061 ←	ATP‑dependent DNA helicase
RA	1,213,656	Δ1 bp	6.0%	coding (3309/4305 nt)	PP_1061 ←	ATP‑dependent DNA helicase
RA	1,219,155	A→G	7.1%	D229G (GAC→GGC) ‡	PP_1064 →	alpha/beta family hydrolase
RA	1,219,156	C→T	8.6%	D229D (GAC→GAT) ‡	PP_1064 →	alpha/beta family hydrolase
RA	1,221,043	T→G	12.5%	D90A (GAC→GCC)	dctD‑II ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,221,052	C→A	13.8%	G87V (GGC→GTC)	dctD‑II ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,226,713	T→A	14.1%	intergenic (‑217/‑114)	gltI ← / → PP_1072	glutamate/aspartate ABC transporter substrate‑binding protein/leucine‑rich repeat‑containing protein
RA	1,226,716	T→A	12.2%	intergenic (‑220/‑111)	gltI ← / → PP_1072	glutamate/aspartate ABC transporter substrate‑binding protein/leucine‑rich repeat‑containing protein
RA	1,229,085	G→C	7.6%	E753D (GAG→GAC)	PP_1072 →	leucine‑rich repeat‑containing protein
RA	1,239,106	G→T	8.0%	intergenic (‑75/‑300)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,239,109	A→C	9.9%	intergenic (‑78/‑297)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,241,968:1	+T	10.2%	intergenic (+27/+31)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,241,973	Δ1 bp	10.4%	intergenic (+32/+26)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,245,336	G→C	16.7%	A66A (GCC→GCG)	pyrC ←	dihydroorotase
RA	1,245,340	G→C	18.1%	P65R (CCG→CGG)	pyrC ←	dihydroorotase
RA	1,245,344	G→C	17.2%	R64G (CGC→GGC)	pyrC ←	dihydroorotase
RA	1,249,755	A→T	10.7%	intergenic (+22/+49)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,757	C→G	10.7%	intergenic (+24/+47)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,759	A→T	11.1%	intergenic (+26/+45)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,253,435	G→C	15.0%	intergenic (‑75/+32)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,253,437	A→T	14.5%	intergenic (‑77/+30)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,253,439	G→C	14.5%	intergenic (‑79/+28)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,272,648	G→A	11.1%	M112I (ATG→ATA)	PP_1113 →	pyridoxal‑phosphate dependent enzyme family protein
RA	1,275,093	G→C	9.3%	intergenic (‑284/+28)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,307,446	C→G	8.7%	G60R (GGC→CGC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,307,447	C→G	8.7%	A59A (GCG→GCC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,327,127	C→T	35.7%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,344,106	G→T	10.2%	P13T (CCT→ACT)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,113	G→C	15.8%	A10A (GCC→GCG) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,114	G→C	15.8%	A10G (GCC→GGC) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,121	A→C	12.2%	C8G (TGC→GGC)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,355,067	C→T	6.8%	E106K (GAA→AAA)	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,361,434	T→C	11.6%	H164H (CAT→CAC)	phoP →	two‑component system DNA‑binding transcriptional regulator
RA	1,361,439	A→T	12.2%	Q166L (CAG→CTG)	phoP →	two‑component system DNA‑binding transcriptional regulator
RA	1,361,442	A→T	12.3%	Q167L (CAG→CTG)	phoP →	two‑component system DNA‑binding transcriptional regulator
RA	1,361,447	G→A	9.7%	V169M (GTG→ATG)	phoP →	two‑component system DNA‑binding transcriptional regulator
RA	1,376,327	A→T	18.7%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,328	G→C	20.1%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,329	A→T	18.5%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,380,728	Δ1 bp	11.8%	intergenic (‑110/+25)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,380,730	T→A	15.8%	intergenic (‑112/+23)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,380,731:1	+C	10.7%	intergenic (‑113/+22)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,382,332	A→T	10.9%	intergenic (+12/+15)	dinB → / ← PP_1204	DNA polymerase IV/lipoprotein
RA	1,389,952	C→G	8.5%	A23G (GCC→GGC)	PP_1212 →	hypothetical protein
RA	1,389,957	C→G	10.4%	P25A (CCG→GCG)	PP_1212 →	hypothetical protein
RA	1,400,878	C→A	8.2%	intergenic (+35/‑134)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,880	A→T	8.2%	intergenic (+37/‑132)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,882	T→G	8.0%	intergenic (+39/‑130)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,403,596	G→A	23.3%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	23.8%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,405,564	C→A	5.8%	V42F (GTC→TTC)	PP_1228 ←	methyl‑accepting chemotaxis transducer
RA	1,409,146	G→A	11.1%	intergenic (+84/‑191)	PP_1230 → / → nadA	hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit
RA	1,414,524	C→T	9.3%	intergenic (‑50/‑210)	PP_1236 ← / → dapA‑I	glycine cleavage system transcriptional repressor/4‑hydroxy‑tetrahydrodipicolinate synthase
RA	1,416,868	G→A	10.0%	R37Q (CGG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,874	T→A	10.0%	L39Q (CTG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,932	T→A	9.4%	H58Q (CAT→CAA)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,940	A→C	7.7%	H61P (CAC→CCC)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,942	G→A	8.0%	V62M (GTG→ATG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,947	T→C	7.8%	H63H (CAT→CAC)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,949	G→T	8.3%	G64V (GGG→GTG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,425,657	T→C	7.0%	intergenic (+52/‑453)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,662	C→T	6.9%	intergenic (+57/‑448)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,663	A→G	6.9%	intergenic (+58/‑447)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,435,218	T→A	7.7%	Q251H (CAA→CAT)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,225	A→T	10.8%	L249Q (CTG→CAG)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,232	T→A	7.8%	M247L (ATG→TTG)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,822	A→T	14.8%	L50Q (CTG→CAG)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,829	A→T	15.1%	C48S (TGC→AGC)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,443,379	C→A	100%	A272S (GCC→TCC)	PP_1262 ←	LysR family transcriptional regulator
RA	1,463,031	A→T	11.9%	intergenic (‑100/+42)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,463,032	A→T	11.9%	intergenic (‑101/+41)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,467,305	C→T	7.9%	G465D (GGT→GAT)	algE ←	alginate production protein AlgE
RA	1,475,002	T→G	18.1%	intergenic (‑775/+26)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,475,003	C→A	18.5%	intergenic (‑776/+25)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,476,736	G→C	7.4%	R264R (CGG→CGC)	PP_1290 →	polysaccharide deacetylase family protein
RA	1,481,007	C→A	9.5%	V246V (GTG→GTT)	rhlB ←	ATP‑dependent RNA helicase RhlB
RA	1,481,493	G→A	8.5%	V84V (GTC→GTT)	rhlB ←	ATP‑dependent RNA helicase RhlB
RA	1,488,064	T→A	16.5%	K89M (AAG→ATG) ‡	degS ←	serine endoprotease DegS
RA	1,488,065	T→A	16.3%	K89* (AAG→TAG) ‡	degS ←	serine endoprotease DegS
RA	1,488,073	T→A	11.5%	Y86F (TAC→TTC)	degS ←	serine endoprotease DegS
RA	1,489,374	C→T	6.7%	intergenic (+166/‑37)	ybgI → / → cysD	metal‑binding hydrolase/oxidase/sulfate adenylyltransferase subunit 2
RA	1,489,377	A→G	6.7%	intergenic (+169/‑34)	ybgI → / → cysD	metal‑binding hydrolase/oxidase/sulfate adenylyltransferase subunit 2
RA	1,491,138	Δ1 bp	9.5%	coding (794/1902 nt)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,491,144	G→C	8.1%	S267T (AGT→ACT)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,491,149:1	+A	8.8%	coding (805/1902 nt)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,497,841	T→G	19.5%	M141R (ATG→AGG)	PP_1310 →	hypothetical protein
RA	1,497,846	C→A	18.0%	L143M (CTG→ATG)	PP_1310 →	hypothetical protein
RA	1,503,474	G→T	13.0%	E90* (GAG→TAG) ‡	rplM →	50S ribosomal protein L13
RA	1,503,475	A→C	13.5%	E90A (GAG→GCG) ‡	rplM →	50S ribosomal protein L13
RA	1,505,547	G→T	11.6%	G217V (GGC→GTC)	petB →	cytochrome b
RA	1,505,550	T→A	12.1%	V218D (GTC→GAC)	petB →	cytochrome b
RA	1,505,553	A→C	12.3%	D219A (GAC→GCC)	petB →	cytochrome b
RA	1,534,931	T→C	12.2%	intergenic (+80/‑103)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,935	C→T	12.1%	intergenic (+84/‑99)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,940	A→G	10.2%	intergenic (+89/‑94)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,944	G→A	11.2%	intergenic (+93/‑90)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,950	A→G	7.8%	intergenic (+99/‑84)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,544,531	C→A	12.1%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	11.7%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	11.4%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	10.8%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	11.4%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	11.8%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,564,973	A→T	8.7%	L133Q (CTG→CAG)	pitB ←	phosphate transporter
RA	1,570,369	A→C	14.0%	K380Q (AAG→CAG)	pcaF‑I →	beta‑ketoadipyl‑CoA thiolase
RA	1,570,373	G→C	15.4%	G381A (GGC→GCC)	pcaF‑I →	beta‑ketoadipyl‑CoA thiolase
RA	1,570,377	G→T	8.9%	L382L (CTG→CTT)	pcaF‑I →	beta‑ketoadipyl‑CoA thiolase
RA	1,580,646	C→T	12.7%	V265I (GTC→ATC)	ttgB ←	efflux pump membrane protein TtgB
RA	1,580,647	A→G	12.7%	D264D (GAT→GAC)	ttgB ←	efflux pump membrane protein TtgB
RA	1,582,815	C→A	16.9%	intergenic (‑219/‑39)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,822	T→A	17.1%	intergenic (‑226/‑32)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,829	T→G	17.0%	intergenic (‑233/‑25)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,584,374	C→G	6.1%	D228H (GAC→CAC)	PP_1388 ←	EmrB/QacA family drug resistance transporter
RA	1,594,291	T→C	9.1%	T392A (ACC→GCC)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,292	G→A	9.5%	G391G (GGC→GGT)	kgtP ←	alpha‑ketoglutarate permease
RA	1,611,932	G→C	10.2%	A63G (GCC→GGC)	PP_1412 ←	3‑hydroxyisobutyryl‑CoA hydrolase
RA	1,629,495	G→T	8.0%	Q321H (CAG→CAT)	mucB →	sigma factor AlgU regulator MucB
RA	1,629,498	A→C	8.0%	*322Y (TAA→TAC)	mucB →	sigma factor AlgU regulator MucB
RA	1,632,814	A→T	8.6%	Y509F (TAT→TTT)	lepA →	elongation factor 4
RA	1,632,817	A→T	8.2%	K510I (AAA→ATA)	lepA →	elongation factor 4
RA	1,637,367	A→T	11.3%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	11.3%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	10.7%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,607	A→G	11.5%	intergenic (‑155/‑156)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,617	C→T	10.7%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,618	G→T	10.7%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,622	G→A	9.8%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,623	T→C	9.9%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,627	A→C	9.5%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,628	A→G	9.5%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,638	C→T	9.5%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,647,612	G→A	100%	D384D (GAC→GAT)	oprB‑II ←	carbohydrate‑selective porin
RA	1,661,519	C→A	9.2%	A50D (GCC→GAC)	PP_1456 →	membrane protein
RA	1,661,522	T→A	9.4%	L51Q (CTG→CAG)	PP_1456 →	membrane protein
RA	1,661,525	T→G	9.2%	V52G (GTC→GGC)	PP_1456 →	membrane protein
RA	1,693,727	C→G	7.1%	P52A (CCT→GCT) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,728	C→G	7.5%	P52R (CCT→CGT) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,832	C→A	9.2%	R87S (CGC→AGC) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,834	C→G	8.4%	R87R (CGC→CGG) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,703,263	T→C	11.1%	intergenic (+70/‑97)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	6.1%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294:1	+T	26.3%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,706,378	T→G	7.9%	M134R (ATG→AGG)	PP_1500 →	lipoprotein
RA	1,707,269	G→C	14.2%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,272	G→C	13.5%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,330:1	+A	10.8%	intergenic (+106/+36)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,335	Δ1 bp	9.5%	intergenic (+111/+31)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,712,993	T→A	14.3%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	14.3%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,718,111	G→C	13.4%	L256F (TTG→TTC)	rsmJ →	ribosomal RNA small subunit methyltransferase J
RA	1,728,698	A→G	12.0%	intergenic (+50/+73)	cspA‑I → / ← PP_1523	major cold shock protein/hypothetical protein
RA	1,728,699	C→T	11.5%	intergenic (+51/+72)	cspA‑I → / ← PP_1523	major cold shock protein/hypothetical protein
RA	1,735,444	C→G	13.4%	R374R (CGG→CGC) ‡	csdA ←	cysteine desulfurase
RA	1,735,445	C→G	13.4%	R374P (CGG→CCG) ‡	csdA ←	cysteine desulfurase
RA	1,750,451	A→C	10.0%	Q29P (CAA→CCA)	PP_1550 →	Cro/CI family transcriptional regulator
RA	1,750,454	G→T	9.9%	W30L (TGG→TTG)	PP_1550 →	Cro/CI family transcriptional regulator
RA	1,765,970:1	+A	6.6%	intergenic (+13/‑34)	PP_1576 → / → PP_1577	immunity protein/lambda family tail tape meausure protein
RA	1,765,972	A→T	8.5%	intergenic (+15/‑32)	PP_1576 → / → PP_1577	immunity protein/lambda family tail tape meausure protein
RA	1,765,973	A→T	12.7%	intergenic (+16/‑31)	PP_1576 → / → PP_1577	immunity protein/lambda family tail tape meausure protein
RA	1,765,975	Δ1 bp	7.4%	intergenic (+18/‑29)	PP_1576 → / → PP_1577	immunity protein/lambda family tail tape meausure protein
RA	1,766,330	C→T	19.3%	L109L (CTC→CTT)	PP_1577 →	lambda family tail tape meausure protein
RA	1,766,331	A→G	20.7%	K110E (AAG→GAG)	PP_1577 →	lambda family tail tape meausure protein
RA	1,813,442	T→C	10.5%	G293G (GGT→GGC)	frmA →	glutathione‑dependent formaldehyde dehydrogenase
RA	1,813,443	G→A	10.5%	A294T (GCC→ACC)	frmA →	glutathione‑dependent formaldehyde dehydrogenase
RA	1,851,755	A→G	100%	I267V (ATC→GTC)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,859,569	A→C	8.6%	intergenic (‑119/+37)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,571	T→A	8.6%	intergenic (‑121/+35)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,573	G→T	8.6%	intergenic (‑123/+33)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,863,282	T→A	9.1%	L309Q (CTG→CAG)	PP_1666 →	hypothetical protein
RA	1,864,792	T→C	7.7%	A28A (GCT→GCC)	hda →	DnaA regulatory inactivator Hda
RA	1,864,795	G→A	7.7%	A29A (GCG→GCA)	hda →	DnaA regulatory inactivator Hda
RA	1,870,187	G→T	7.7%	G112V (GGC→GTC)	cobD →	Subunit of adenosylcobinamide‑phosphate synthase beta component
RA	1,870,190	A→C	8.0%	D113A (GAC→GCC)	cobD →	Subunit of adenosylcobinamide‑phosphate synthase beta component
RA	1,898,702	T→C	8.5%	intergenic (+66/‑105)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,899,332	G→A	5.5%	intergenic (+360/‑160)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,912,464	C→T	6.3%	R350R (CGG→CGA)	PP_1712 ←	hypothetical protein
RA	1,921,591	T→A	10.5%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	10.5%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,960,142	T→A	13.4%	intergenic (+50/‑78)	bolA → / → PP_1758	DNA‑binding transcriptional dual regulator/rhodanese‑like domain‑containing sulfurtransferase
RA	1,967,689	C→G	13.3%	G115A (GGC→GCC) ‡	yciK ←	putative oxidoreductase
RA	1,967,690	C→G	13.4%	G115R (GGC→CGC) ‡	yciK ←	putative oxidoreductase
RA	1,968,296	C→T	6.8%	G189D (GGC→GAC)	gph ←	phosphoglycolate phosphatase
RA	1,971,099	A→G	13.8%	noncoding (85/86 nt)	PP_mr25 →	gyrA regulatory region
RA	1,972,518	C→T	7.8%	T468T (ACC→ACT)	gyrA →	DNA gyrase subunit A
RA	1,973,914	A→T	9.4%	intergenic (+28/‑120)	gyrA → / → serC	DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	1,973,915	A→T	9.2%	intergenic (+29/‑119)	gyrA → / → serC	DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	2,031,899	T→A	8.7%	K130M (AAG→ATG) ‡	kdsA‑II ←	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,031,900	T→A	8.7%	K130* (AAG→TAG) ‡	kdsA‑II ←	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,058,356	G→C	10.8%	intergenic (‑99/‑138)	PP_1833 ← / → PP_1834	hypothetical protein/hypothetical protein
RA	2,068,194	A→T	16.2%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,068,195	A→T	16.2%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,077,807	C→T	12.9%	A163V (GCG→GTG)	PP_1853 →	LysR family transcriptional regulator
RA	2,077,810	A→G	11.1%	H164R (CAC→CGC)	PP_1853 →	LysR family transcriptional regulator
RA	2,078,282	T→C	8.3%	intergenic (+24/+91)	PP_1853 → / ← PP_1854	LysR family transcriptional regulator/hypothetical protein
RA	2,092,458	C→T	11.6%	intergenic (+61/+30)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,459	T→C	13.3%	intergenic (+62/+29)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,097,500	C→T	7.3%	P135L (CCG→CTG)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,097,506	G→C	7.3%	S137T (AGT→ACT)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,097,512	A→G	8.9%	Q139R (CAG→CGG)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,115,877	C→A	9.7%	L452M (CTG→ATG)	PP_1883 →	hypothetical protein
RA	2,133,379	T→C	6.7%	D90G (GAC→GGC)	fimI ←	type I pili subunit FimI
RA	2,134,314	A→C	11.4%	intergenic (‑37/+32)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,136,732	A→T	9.5%	L21Q (CTG→CAG)	fadE ←	medium‑long chain acyl‑CoA dehydrogenase
RA	2,154,102	T→A	8.8%	intergenic (+112/+98)	PP_1908 → / ← PP_1909	putative Peptidase/septum formation protein
RA	2,154,103	T→A	7.3%	intergenic (+113/+97)	PP_1908 → / ← PP_1909	putative Peptidase/septum formation protein
RA	2,241,611	G→C	8.8%	noncoding (35/76 nt)	PP_t25 →	tRNA‑Ala
RA	2,252,856	T→A	6.7%	intergenic (+69/‑50)	leuD → / → PP_1987	3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase
RA	2,252,857	T→A	6.8%	intergenic (+70/‑49)	leuD → / → PP_1987	3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase
RA	2,271,709	C→T	7.7%	intergenic (+50/‑50)	PP_t32 → / → PP_t33	tRNA‑Asp/tRNA‑Asp
RA	2,271,710	A→G	7.7%	intergenic (+51/‑49)	PP_t32 → / → PP_t33	tRNA‑Asp/tRNA‑Asp
RA	2,279,619	T→A	7.7%	L239Q (CTG→CAG)	fadH →	2,4‑dienoyl‑CoA reductase
RA	2,282,780	T→G	18.1%	intergenic (‑129/+100)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,813	T→G	49.0%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,817	G→C	43.7%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,818	G→C	43.6%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,822	C→A	37.8%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,296,137	Δ1 bp	7.3%	coding (393/600 nt)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,144	T→G	7.9%	E129A (GAG→GCG) ‡	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,145	C→A	6.9%	E129* (GAG→TAG) ‡	PP_2023 ←	glutathione S‑transferase family protein
RA	2,298,647	G→A	10.1%	D506D (GAC→GAT)	sbcC ←	exonuclease subunit SbcC
RA	2,305,255	G→A	10.8%	L449L (CTG→TTG)	PP_2028 ←	TPR repeat‑containing protein
RA	2,305,256	T→C	10.4%	Q448Q (CAA→CAG)	PP_2028 ←	TPR repeat‑containing protein
RA	2,359,383	A→G	6.2%	M100V (ATG→GTG)	PP_2074 →	LysR family transcriptional regulator
RA	2,377,116:1	+G	8.5%	coding (230/492 nt)	PP_2084 →	ribonuclease activity regulator
RA	2,377,121	Δ1 bp	8.5%	coding (235/492 nt)	PP_2084 →	ribonuclease activity regulator
RA	2,381,445	T→G	20.8%	intergenic (+31/+56)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,381,446	C→A	17.6%	intergenic (+32/+55)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,390,910	T→C	9.1%	R576R (CGT→CGC)	rlmKL →	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
RA	2,390,913	G→A	9.8%	M577I (ATG→ATA)	rlmKL →	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
RA	2,402,344:1	+A	9.8%	coding (66/330 nt)	PP_2103 ←	hypothetical protein
RA	2,402,351	A→T	9.7%	L20Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,402,354	A→T	9.7%	L19Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,420,641	Δ1 bp	9.6%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,645:1	+T	10.0%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,425,301	G→C	13.8%	R290T (AGG→ACG)	yegS →	lipid kinase
RA	2,425,306	G→C	12.1%	A292P (GCG→CCG)	yegS →	lipid kinase
RA	2,425,311	G→C	11.4%	A293A (GCG→GCC)	yegS →	lipid kinase
RA	2,444,458	A→C	9.6%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,444,462	G→T	10.0%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,463	A→C	10.0%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,467	G→T	9.6%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,468,304	G→C	7.9%	intergenic (‑25/+98)	PP_2161 ← / ← PP_2162	hypothetical protein/phosphonoacetaldehyde phosphonohydrolase‑like protein
RA	2,483,440	G→A	18.6%	R88H (CGC→CAC)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,443	T→A	17.9%	L89Q (CTG→CAG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,446	T→C	18.3%	V90A (GTG→GCG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,500,613	G→A	8.2%	intergenic (+17/+8)	PP_2193 → / ← PP_2194	ferric siderophore receptor/LysR family transcriptional regulator
RA	2,500,618	T→C	8.2%	intergenic (+22/+3)	PP_2193 → / ← PP_2194	ferric siderophore receptor/LysR family transcriptional regulator
RA	2,540,852	T→A	9.4%	intergenic (+22/+27)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,853	G→C	9.2%	intergenic (+23/+26)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,854	T→A	8.8%	intergenic (+24/+25)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,567,124	Δ1 bp	8.3%	coding (847/879 nt)	PP_2250 ←	LysR family transcriptional regulator
RA	2,567,128:1	+C	7.8%	coding (843/879 nt)	PP_2250 ←	LysR family transcriptional regulator
RA	2,568,736	T→A	6.2%	Q285H (CAA→CAT)	PP_2252 ←	hypothetical protein
RA	2,568,739	T→G	6.2%	E284D (GAA→GAC)	PP_2252 ←	hypothetical protein
RA	2,568,747	T→A	6.4%	M282L (ATG→TTG)	PP_2252 ←	hypothetical protein
RA	2,577,185:1	+T	6.2%	coding (1253/1776 nt)	PP_2259 ←	sigma‑54 dependent transcriptional regulator
RA	2,577,194	Δ1 bp	7.4%	coding (1244/1776 nt)	PP_2259 ←	sigma‑54 dependent transcriptional regulator
RA	2,579,691	T→C	7.1%	V353A (GTG→GCG)	PP_2260 →	glycerol‑phosphate ABC transporter ATP‑binding protein
RA	2,579,695	Δ1 bp	7.7%	coding (1062/1095 nt)	PP_2260 →	glycerol‑phosphate ABC transporter ATP‑binding protein
RA	2,607,258	C→A	6.4%	S575R (AGC→AGA)	PP_2284 →	tail tubular protein B
RA	2,623,965	G→T	8.8%	Q171H (CAG→CAT)	PP_2295 →	antirestriction protein
RA	2,628,429	A→C	14.3%	A16A (GCA→GCC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,628,430	G→T	15.1%	G17C (GGC→TGC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,633,500	T→G	12.8%	intergenic (+100/‑82)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,633,501	C→A	12.8%	intergenic (+101/‑81)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,643,810	T→C	9.1%	intergenic (+73/‑176)	PP_2313 → / → PP_2314	membrane protein/hypothetical protein
RA	2,651,319	G→C	10.0%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,669,714	T→G	14.0%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,717	C→A	12.9%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,714,844	C→A	11.4%	S101S (TCG→TCT)	metH ←	cobalamin‑dependent methionine synthase
RA	2,719,298	Δ1 bp	10.2%	coding (382/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,719,306:1	+T	9.8%	coding (390/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,726,283	C→A	8.1%	S139I (AGT→ATT)	PP_2387 ←	hypothetical protein
RA	2,745,432	C→G	13.0%	V98L (GTA→CTA)	PP_2400 ←	hypothetical protein
RA	2,745,483	G→T	8.0%	L81M (CTG→ATG)	PP_2400 ←	hypothetical protein
RA	2,745,488	A→G	8.9%	L79P (CTG→CCG)	PP_2400 ←	hypothetical protein
RA	2,759,076	G→T	9.5%	P44Q (CCG→CAG)	PP_2412 ←	ParA family protein
RA	2,759,083	G→C	10.8%	L42V (CTC→GTC)	PP_2412 ←	ParA family protein
RA	2,759,091	A→C	9.3%	L39R (CTG→CGG)	PP_2412 ←	ParA family protein
RA	2,771,777	C→T	7.4%	P145L (CCG→CTG)	PP_2424 →	2'‑5' RNA ligase
RA	2,775,303	G→C	10.1%	R84R (CGC→CGG)	PP_5521 ←	hypothetical protein
RA	2,775,306	G→C	10.5%	F83L (TTC→TTG)	PP_5521 ←	hypothetical protein
RA	2,775,309	T→G	10.8%	A82A (GCA→GCC)	PP_5521 ←	hypothetical protein
RA	2,783,968	G→C	10.7%	L126L (CTG→CTC)	PP_2437 →	acyl‑CoA dehydrogenase
RA	2,783,969	G→C	10.6%	E127Q (GAG→CAG)	PP_2437 →	acyl‑CoA dehydrogenase
RA	2,788,319	C→G	15.0%	A200G (GCC→GGC) ‡	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,788,320	C→G	14.7%	A200A (GCC→GCG) ‡	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,799,214	A→G	8.0%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,220	C→T	8.7%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,223	A→G	8.7%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,229	C→T	8.7%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,810,641	C→G	11.4%	C335W (TGC→TGG)	thrS →	threonine‑‑tRNA ligase
RA	2,841,978	T→A	12.4%	intergenic (‑114/+138)	yqhD ← / ← PP_2493	NAD(P)‑dependent alcohol dehydrogenase/RadC family protein
RA	2,841,979	T→A	11.8%	intergenic (‑115/+137)	yqhD ← / ← PP_2493	NAD(P)‑dependent alcohol dehydrogenase/RadC family protein
RA	2,852,231	G→T	13.8%	intergenic (+99/+106)	PP_5531 → / ← PP_2505	hypothetical protein/GAF domain/GGDEF domain‑containing protein
RA	2,852,232	G→A	13.8%	intergenic (+100/+105)	PP_5531 → / ← PP_2505	hypothetical protein/GAF domain/GGDEF domain‑containing protein
RA	2,852,239	T→C	11.7%	intergenic (+107/+98)	PP_5531 → / ← PP_2505	hypothetical protein/GAF domain/GGDEF domain‑containing protein
RA	2,852,240	A→C	11.8%	intergenic (+108/+97)	PP_5531 → / ← PP_2505	hypothetical protein/GAF domain/GGDEF domain‑containing protein
RA	2,852,440	T→A	15.8%	Q312L (CAG→CTG)	PP_2505 ←	GAF domain/GGDEF domain‑containing protein
RA	2,859,192	G→A	9.5%	C127Y (TGT→TAT) ‡	PP_2511 →	hypothetical protein
RA	2,859,193	T→C	9.7%	C127C (TGT→TGC) ‡	PP_2511 →	hypothetical protein
RA	2,868,919	G→C	9.8%	intergenic (+415/‑516)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,868,920	G→C	10.5%	intergenic (+416/‑515)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,915,892	T→C	10.5%	Y1623Y (TAT→TAC)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,951,377	G→C	18.4%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,384	A→C	17.3%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,385	G→T	17.6%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,392	G→C	12.1%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,958,833	T→C	10.0%	intergenic (+56/+86)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,842	G→C	10.5%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,843	T→C	13.0%	intergenic (+66/+76)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,846	G→C	11.1%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,849	G→A	11.1%	intergenic (+72/+70)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,850	G→C	11.3%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,859	G→A	10.4%	intergenic (+82/+60)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,966,460	T→A	7.6%	R70R (CGA→CGT)	PP_2595 ←	ABC transporter permease/ATP‑binding protein
RA	2,973,308:1	+T	6.6%	coding (609/1713 nt)	PP_2600 ←	hypothetical protein
RA	2,975,144	A→G	6.8%	Q40R (CAG→CGG)	ligC →	4‑carboxy‑2‑hydroxymuconate‑6‑semialdehyde dehydrogenase
RA	3,020,873	A→T	5.7%	R456R (CGA→CGT)	PP_2638 →	cellulose synthase operon protein C
RA	3,020,879	C→G	5.6%	S458R (AGC→AGG)	PP_2638 →	cellulose synthase operon protein C
RA	3,041,438	G→C	10.7%	A199A (GCC→GCG) ‡	PP_2653 ←	Cro/CI family transcriptional regulator
RA	3,041,439	G→C	10.6%	A199G (GCC→GGC) ‡	PP_2653 ←	Cro/CI family transcriptional regulator
RA	3,099,485	Δ1 bp	11.4%	coding (221/1470 nt)	PP_2709 →	long‑chain fatty acid‑‑CoA ligase
RA	3,099,491	C→G	11.3%	A76G (GCC→GGC)	PP_2709 →	long‑chain fatty acid‑‑CoA ligase
RA	3,099,496:1	+A	11.4%	coding (232/1470 nt)	PP_2709 →	long‑chain fatty acid‑‑CoA ligase
RA	3,104,342	T→A	8.7%	L276Q (CTG→CAG)	PP_2714 →	sensor histidine kinase
RA	3,116,965	A→C	15.1%	L158R (CTC→CGC)	PP_2733 ←	membrane protein
RA	3,146,654	T→C	15.2%	intergenic (+47/+19)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,657	G→A	14.6%	intergenic (+50/+16)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,172,489	A→G	10.5%	T240A (ACG→GCG)	PP_2784 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,195,808	A→T	9.7%	L101Q (CTG→CAG)	dhaT ←	1,3‑propanediol dehydrogenase
RA	3,195,811	A→T	9.8%	L100Q (CTG→CAG)	dhaT ←	1,3‑propanediol dehydrogenase
RA	3,212,319	T→C	7.3%	*189W (TGA→TGG) ‡	PP_2816 ←	transcriptional regulator NfxB
RA	3,212,321	A→T	7.4%	*189R (TGA→AGA) ‡	PP_2816 ←	transcriptional regulator NfxB
RA	3,212,324	A→T	7.4%	Y188N (TAT→AAT)	PP_2816 ←	transcriptional regulator NfxB
RA	3,215,713	C→T	8.3%	L529F (CTC→TTC) ‡	mexD →	multidrug RND transporter MexD
RA	3,215,715	C→G	9.1%	L529L (CTC→CTG) ‡	mexD →	multidrug RND transporter MexD
RA	3,215,717	A→G	9.1%	N530S (AAC→AGC)	mexD →	multidrug RND transporter MexD
RA	3,218,704:1	+C	10.2%	intergenic (+44/+39)	oprJ → / ← nfxB	outer membrane protein OprJ/HTH‑type transcriptional regulator NfxB
RA	3,218,711	Δ1 bp	9.8%	intergenic (+51/+32)	oprJ → / ← nfxB	outer membrane protein OprJ/HTH‑type transcriptional regulator NfxB
RA	3,228,340	A→G	14.3%	H379R (CAC→CGC) ‡	PP_2828 →	hypothetical protein
RA	3,228,341	C→T	13.9%	H379H (CAC→CAT) ‡	PP_2828 →	hypothetical protein
RA	3,236,191	G→T	16.7%	G415C (GGT→TGT) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,236,193	T→A	17.2%	G415G (GGT→GGA) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,236,195	A→C	16.7%	Q416P (CAG→CCG)	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,252,535	G→A	16.3%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,540	T→C	16.3%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,276,383	A→C	7.6%	intergenic (+42/+5)	PP_2874 → / ← PP_2875	hypothetical protein/hypothetical protein
RA	3,287,319	T→C	13.8%	intergenic (+17/+24)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,287,320	G→A	14.0%	intergenic (+18/+23)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,313,868	C→A	24.0%	intergenic (+30/‑129)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,313,871	T→G	24.0%	intergenic (+33/‑126)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,328,758	C→A	8.3%	A89D (GCC→GAC)	PP_2927 →	hypothetical protein
RA	3,333,397	G→A	11.8%	P151L (CCG→CTG)	PP_2931 ←	hypothetical protein
RA	3,333,406	T→C	13.0%	Q148R (CAG→CGG)	PP_2931 ←	hypothetical protein
RA	3,340,622:1	+A	10.0%	coding (249/1587 nt)	ybiT ←	ABC‑F family ATPase
RA	3,340,627	Δ1 bp	10.4%	coding (244/1587 nt)	ybiT ←	ABC‑F family ATPase
RA	3,368,473	C→G	10.5%	A579G (GCC→GGC)	PP_2964 →	transposase
RA	3,368,475	A→C	10.5%	R580R (AGG→CGG)	PP_2964 →	transposase
RA	3,380,579	A→G	17.5%	N70D (AAC→GAC)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,583	T→A	18.9%	L71Q (CTG→CAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,587	C→T	17.5%	V72V (GTC→GTT)	tnpT‑I →	cointegrate resolution protein T
RA	3,397,589	C→T	9.5%	G9G (GGC→GGT)	PP_3002 →	shikimate dehydrogenase‑like protein
RA	3,397,592	A→G	9.5%	R10R (CGA→CGG)	PP_3002 →	shikimate dehydrogenase‑like protein
RA	3,424,932:1	+G	8.5%	intergenic (+477/‑35)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,424,935	T→A	8.5%	intergenic (+480/‑32)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,424,938	Δ1 bp	8.8%	intergenic (+483/‑29)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,453,506	C→T	13.6%	intergenic (‑17/+96)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,466,098	G→C	7.7%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,099	A→T	7.7%	noncoding (104/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,100	A→T	7.7%	noncoding (103/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,101	G→C	7.7%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,884	T→G	8.6%	intergenic (‑16/+108)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,466,885	G→C	8.1%	intergenic (‑17/+107)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,466,886	C→A	8.0%	intergenic (‑18/+106)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,466,896	C→G	7.9%	intergenic (‑28/+96)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,485,143	G→A	8.6%	P275L (CCG→CTG)	PP_3091 ←	membrane protein
RA	3,485,146	T→C	9.3%	Q274R (CAG→CGG)	PP_3091 ←	membrane protein
RA	3,502,143	A→T	9.5%	N163Y (AAT→TAT)	PP_5568 →	membrane protein
RA	3,532,597	G→C	9.5%	A210G (GCC→GGC)	PP_3121 ←	transcriptional regulator, LysR family
RA	3,536,851	A→T	12.4%	D149V (GAC→GTC)	PP_3125 →	Cro/CI family transcriptional regulator
RA	3,551,117	C→T	14.8%	Q76* (CAG→TAG) ‡	PP_3135 →	glycosyl transferase
RA	3,551,118	A→G	13.3%	Q76R (CAG→CGG) ‡	PP_3135 →	glycosyl transferase
RA	3,560,699	C→T	9.3%	S137S (AGC→AGT)	tdcG‑III →	L‑serine dehydratase
RA	3,584,941	G→T	12.8%	intergenic (+45/‑90)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,584,942	A→C	13.1%	intergenic (+46/‑89)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,587,762	C→G	6.4%	A185A (GCC→GCG)	catA‑II →	catechol 1,2‑dioxygenase
RA	3,624,187	G→C	12.2%	intergenic (‑92/+81)	PP_3194 ← / ← PP_3195	hypothetical protein/hypothetical protein
RA	3,628,125	C→G	11.0%	intergenic (+11/‑129)	PP_3198 → / → PP_3199	2Fe‑2S ferredoxin/monooxygenase
RA	3,630,695	T→A	11.4%	W425R (TGG→AGG)	PP_3200 →	hypothetical protein
RA	3,630,700	T→G	10.2%	L426L (CTT→CTG)	PP_3200 →	hypothetical protein
RA	3,630,703	C→A	9.8%	A427A (GCC→GCA)	PP_3200 →	hypothetical protein
RA	3,641,745	G→C	6.7%	P26A (CCG→GCG)	PP_3208 ←	Pdr/VanB family oxidoreductase
RA	3,673,285	A→T	8.3%	D97V (GAC→GTC)	PP_3237 →	universal stress protein family protein
RA	3,675,925	C→A	8.0%	A18A (GCC→GCA)	PP_3240 →	hypothetical protein
RA	3,691,282	G→T	8.3%	L194I (CTC→ATC)	PP_3257 ←	putative Methyltransferase
RA	3,691,283	A→C	9.5%	D193E (GAT→GAG)	PP_3257 ←	putative Methyltransferase
RA	3,705,109	G→T	10.2%	A312A (GCC→GCA)	paaZ ←	bifunctional oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase
RA	3,711,792	A→G	7.3%	Y78H (TAT→CAT)	paaB ←	ring 1,2‑phenylacetyl‑CoA epoxidase regulatory subunit
RA	3,715,401	A→T	10.9%	D166E (GAT→GAA)	paaJ ←	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
RA	3,716,176	G→C	13.8%	T52T (ACC→ACG) ‡	paaI ←	hydroxyphenylacetyl‑CoA thioesterase
RA	3,716,177	G→C	13.7%	T52S (ACC→AGC) ‡	paaI ←	hydroxyphenylacetyl‑CoA thioesterase
RA	3,723,174	C→A	9.2%	L130M (CTG→ATG)	PP_3288 →	universal stress protein family protein
RA	3,745,446	T→C	6.8%	V230A (GTG→GCG)	paoC →	aromatic aldehyde dehydrogenase molybdopterin‑binding subunit
RA	3,762,985	A→T	13.6%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,762,990	A→T	9.5%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein
RA	3,763,545	A→G	6.3%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,547	G→C	6.2%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,774,290	C→G	12.8%	A317G (GCC→GGC)	PP_5743 →	TonB‑dependent receptor protein
RA	3,784,462	G→T	9.7%	R248L (CGG→CTG)	nikE →	nickel ABC transporter ATP‑binding protein
RA	3,793,457	A→G	7.0%	L370S (TTG→TCG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,935	A→T	12.2%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,940	A→T	11.8%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,811,899	G→A	7.8%	A60A (GCG→GCA)	PP_3368 →	MFS transporter
RA	3,811,902	T→C	7.8%	Y61Y (TAT→TAC)	PP_3368 →	MFS transporter
RA	3,838,124	C→T	7.7%	A559V (GCC→GTC)	PP_3388 →	hypothetical protein
RA	3,850,600	Δ1 bp	7.1%	coding (38/474 nt)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,850,602	G→C	7.2%	A14P (GCG→CCG)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,850,603:1	+A	7.7%	coding (41/474 nt)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,869,902	T→G	15.1%	E354A (GAG→GCG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,869,903	C→A	17.0%	E354* (GAG→TAG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,914,477	G→C	9.7%	R118R (CGC→CGG)	PP_3454 ←	transcriptional regulator
RA	3,924,907	T→A	15.4%	*543L (TAA→TTA)	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,941,121:1	+A	7.7%	coding (123/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,941,126	Δ1 bp	7.3%	coding (118/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,962,544	T→A	6.0%	L233Q (CTG→CAG)	PP_3492 →	acyl‑CoA dehydrogenase
RA	3,983,797	A→G	6.0%	Q256R (CAA→CGA)	ilvE →	branched‑chain‑amino acid aminotransferase
RA	3,983,800	C→T	6.1%	S257L (TCG→TTG)	ilvE →	branched‑chain‑amino acid aminotransferase
RA	4,049,951	A→G	15.6%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,954	C→G	15.8%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,957	C→T	15.6%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,051,942	C→T	6.1%	R186H (CGT→CAT)	PP_3571 ←	acetylornithine deacetylase
RA	4,051,945	A→G	6.1%	M185T (ATG→ACG)	PP_3571 ←	acetylornithine deacetylase
RA	4,082,776	C→G	8.5%	A226G (GCG→GGG)	PP_3592 →	RpiR family transcriptional regulator
RA	4,133,672	G→T	7.8%	A114D (GCC→GAC)	PP_3637 ←	sulfonate ABC transporter ATP‑binding protein
RA	4,143,926	T→A	12.2%	intergenic (+35/‑88)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,143,927	T→A	12.2%	intergenic (+36/‑87)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,150,143	C→A	6.3%	intergenic (+98/‑299)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,164,734	A→T	11.3%	intergenic (+40/+77)	PP_3665 → / ← PP_3666	AraC family transcriptional regulator/MHS family metabolite MFS transporter
RA	4,164,735	A→T	11.3%	intergenic (+41/+76)	PP_3665 → / ← PP_3666	AraC family transcriptional regulator/MHS family metabolite MFS transporter
RA	4,185,604	C→G	9.2%	L446L (CTC→CTG)	PP_3681 →	putative Helicase
RA	4,196,187	T→C	10.5%	V144V (GTT→GTC)	PP_5618 →	Cro/CI family transcriptional regulator
RA	4,196,188	G→A	10.0%	A145T (GCC→ACC)	PP_5618 →	Cro/CI family transcriptional regulator
RA	4,196,194	G→C	10.5%	A147P (GCC→CCC)	PP_5618 →	Cro/CI family transcriptional regulator
RA	4,221,231	G→T	21.0%	intergenic (+46/+216)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,221,233	A→T	17.4%	intergenic (+48/+214)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,221,235	A→C	16.7%	intergenic (+50/+212)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,237,680	T→G	8.7%	E205A (GAG→GCG) ‡	catB ←	muconate cycloisomerase 1
RA	4,237,681	C→A	8.5%	E205* (GAG→TAG) ‡	catB ←	muconate cycloisomerase 1
RA	4,248,398	C→T	6.5%	R558H (CGC→CAC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,402	T→G	6.1%	M557L (ATG→CTG)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,403	C→A	6.0%	Q556H (CAG→CAT)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,407	A→G	6.0%	V555A (GTG→GCG)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,656	A→C	7.7%	L472R (CTG→CGG)	PP_3724 ←	acyl‑CoA synthetase
RA	4,272,817	G→A	10.3%	V23I (GTC→ATC)	PP_3743 →	hypothetical protein
RA	4,272,822	T→C	10.6%	D24D (GAT→GAC)	PP_3743 →	hypothetical protein
RA	4,278,931	C→G	9.5%	H29Q (CAC→CAG)	PP_3750 →	GntR family transcriptional regulator
RA	4,278,932	C→G	9.4%	L30V (CTG→GTG)	PP_3750 →	GntR family transcriptional regulator
RA	4,281,399	A→C	9.4%	S23R (AGT→AGG)	PP_3751 ←	cyanate transporter
RA	4,281,403	G→A	9.4%	T22I (ACC→ATC) ‡	PP_3751 ←	cyanate transporter
RA	4,281,404	T→C	9.4%	T22A (ACC→GCC) ‡	PP_3751 ←	cyanate transporter
RA	4,281,408	G→T	10.0%	I20I (ATC→ATA)	PP_3751 ←	cyanate transporter
RA	4,281,957	G→A	6.8%	intergenic (‑490/+228)	PP_3751 ← / ← PP_3753	cyanate transporter/AraC family transcriptional regulator
RA	4,294,660	C→T	5.9%	V253M (GTG→ATG)	opdN ←	outer‑membrane porin D
RA	4,295,000	G→T	17.1%	S139S (TCC→TCA)	opdN ←	outer‑membrane porin D
RA	4,296,910	A→G	8.2%	intergenic (+33/‑65)	gloA → / → PP_3767	lactoylglutathione lyase/hypothetical protein
RA	4,296,911	C→T	8.3%	intergenic (+34/‑64)	gloA → / → PP_3767	lactoylglutathione lyase/hypothetical protein
RA	4,297,638	G→A	6.5%	R154C (CGC→TGC)	PP_3768 ←	shikimate 5‑dehydrogenase
RA	4,301,390	G→A	7.7%	G171R (GGG→AGG)	PP_3774 →	hypothetical protein
RA	4,305,648	G→A	7.8%	R151C (CGC→TGC)	PP_3777 ←	hypothetical protein
RA	4,305,651	G→A	8.3%	Q150* (CAG→TAG)	PP_3777 ←	hypothetical protein
RA	4,305,652	T→C	8.3%	L149L (CTA→CTG)	PP_3777 ←	hypothetical protein
RA	4,305,655	T→C	8.5%	A148A (GCA→GCG)	PP_3777 ←	hypothetical protein
RA	4,311,358	T→A	8.8%	F12I (TTT→ATT) ‡	PP_3784 →	hypothetical protein
RA	4,311,359	T→A	8.8%	F12Y (TTT→TAT) ‡	PP_3784 →	hypothetical protein
RA	4,338,437	T→A	7.5%	intergenic (+13/+129)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,447	T→C	7.0%	intergenic (+23/+119)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,448	G→A	7.3%	intergenic (+24/+118)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,537	A→T	12.1%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,538	A→T	11.9%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,344,357	C→G	6.9%	intergenic (+44/‑112)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,344,363	A→G	8.4%	intergenic (+50/‑106)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,348,749	A→G	52.1%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,349,078	T→G	6.7%	intergenic (‑399/+75)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,349,081	C→A	5.7%	intergenic (‑402/+72)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,357,790	T→C	10.1%	intergenic (+92/‑162)	PP_3831 → / → PP_3832	hypothetical protein/CsrA‑like carbon storage regulator
RA	4,357,791	G→A	8.6%	intergenic (+93/‑161)	PP_3831 → / → PP_3832	hypothetical protein/CsrA‑like carbon storage regulator
RA	4,415,076	T→C	8.3%	intergenic (+141/+27)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,415,081	G→A	10.4%	intergenic (+146/+22)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,438,253	A→T	7.2%	K457* (AAG→TAG) ‡	PP_3932 →	diguanylate cyclase
RA	4,438,254	A→T	7.2%	K457M (AAG→ATG) ‡	PP_3932 →	diguanylate cyclase
RA	4,442,672	C→G	9.1%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,673	C→G	9.1%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,456,504	G→A	7.4%	H175H (CAC→CAT)	PP_3950 ←	methyl‑accepting chemotaxis transducer
RA	4,456,509	T→C	7.7%	M174V (ATG→GTG)	PP_3950 ←	methyl‑accepting chemotaxis transducer
RA	4,471,732	T→A	5.6%	intergenic (‑499/‑395)	PP_3961 ← / → PP_3962	transporter/hypothetical protein
RA	4,503,833	C→T	10.0%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,503,834	A→G	10.0%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,541,821:1	+G	8.3%	coding (494/1503 nt)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,825	Δ1 bp	8.7%	coding (498/1503 nt)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,553,312	A→T	11.2%	L553Q (CTG→CAG)	PP_4041 ←	glycoside hydrolase
RA	4,553,315	A→T	11.3%	L552Q (CTG→CAG)	PP_4041 ←	glycoside hydrolase
RA	4,557,073	T→G	10.0%	K150Q (AAG→CAG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,557,078	A→C	9.8%	L148R (CTG→CGG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,557,081	G→T	10.3%	P147Q (CCG→CAG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,557,086	C→A	10.3%	L145L (CTG→CTT)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,563,362	G→A	10.5%	T181T (ACC→ACT)	vgrG‑III ←	type VI secretion system protein
RA	4,572,399	T→A	8.1%	V740D (GTC→GAC)	treY →	maltooligosyl trehalose synthase
RA	4,587,741	G→T	6.4%	R40R (CGC→CGA) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,587,743	G→C	6.8%	R40G (CGC→GGC) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,587,744	G→C	6.8%	S39S (TCC→TCG) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,587,746	A→C	6.8%	S39A (TCC→GCC) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,587,764	C→T	7.2%	D33N (GAC→AAC)	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,587,767	A→G	7.4%	C32R (TGC→CGC)	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,604,250	C→G	12.2%	P12A (CCG→GCG) ‡	PP_4076 →	hypothetical protein
RA	4,604,251	C→G	12.2%	P12R (CCG→CGG) ‡	PP_4076 →	hypothetical protein
RA	4,635,606	T→G	100%	T66P (ACC→CCC)	uvrY ←	BarA/UvrY two‑componenent system response regulator
RA	4,638,919	T→A	9.2%	L530Q (CTG→CAG)	PP_4103 →	low‑affinity inorganic phosphate transporter
RA	4,638,924	T→A	8.3%	W532R (TGG→AGG)	PP_4103 →	low‑affinity inorganic phosphate transporter
RA	4,666,358	G→C	10.4%	S26S (TCG→TCC)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,666,366	Δ1 bp	10.8%	coding (86/1854 nt)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,666,373	C→G	6.6%	A31A (GCC→GCG)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,671,026	G→A	6.5%	E438K (GAG→AAG)	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,673,595	G→C	11.3%	P107P (CCG→CCC)	PP_4137 →	outer membrane siderophore receptor
RA	4,673,596	G→C	12.6%	G108R (GGG→CGG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,673,597	G→C	11.3%	G108A (GGG→GCG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,705,459	T→A	14.7%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,460	T→A	14.7%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,470	A→G	12.4%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,471	G→A	12.3%	intergenic (‑163/+14)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,706,233	G→T	7.3%	P102H (CCC→CAC)	PP_4162 ←	membrane protein
RA	4,706,239	C→T	6.9%	G100D (GGC→GAC)	PP_4162 ←	membrane protein
RA	4,706,242	T→A	6.9%	D99V (GAC→GTC)	PP_4162 ←	membrane protein
RA	4,709,233	G→A	6.4%	Q110* (CAG→TAG)	PP_4166 ←	hypothetical protein
RA	4,717,858	G→A	8.3%	R126H (CGC→CAC)	fabB →	3‑oxoacyl‑ACP synthase
RA	4,730,172	T→C	6.5%	S440G (AGT→GGT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,730,173	G→A	7.0%	T439T (ACC→ACT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,731,726	T→C	9.6%	N361D (AAT→GAT)	sucB ←	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,731,727	G→A	7.7%	I360I (ATC→ATT)	sucB ←	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,741,273:1	+C	61.5%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	36.2%	intergenic (+465/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275	A→G	63.7%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	C→G	30.4%	intergenic (+467/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,277	C→T	69.4%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,279	C→T	26.6%	intergenic (+470/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280	C→T	69.3%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,281	G→T	23.0%	intergenic (+472/+280)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,282	C→G	23.1%	intergenic (+473/+279)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283	C→G	79.9%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,284	A→G	23.1%	intergenic (+475/+277)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,285	A→C	77.5%	intergenic (+476/+276)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,286	C→T	76.9%	intergenic (+477/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,286:1	+T	23.1%	intergenic (+477/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298:1	+T	54.5%	intergenic (+489/+263)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,299	C→T	42.4%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,301	A→C	45.1%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,302	A→G	56.1%	intergenic (+493/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,304	C→G	44.9%	intergenic (+495/+257)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,305	Δ1 bp	54.5%	intergenic (+496/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,768,309	T→G	10.2%	E183A (GAG→GCG)	PP_4218 ←	lipase/esterase family protein
RA	4,768,312	C→A	8.1%	R182L (CGC→CTC)	PP_4218 ←	lipase/esterase family protein
RA	4,788,869	G→C	6.1%	V1672V (GTC→GTG)	pvdI ←	non‑ribosomal peptide synthetase
RA	4,821,175	C→T	5.5%	E3354K (GAG→AAG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,821,179	G→C	5.6%	L3352L (CTC→CTG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,821,183	A→G	5.5%	L3351S (TTG→TCG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,823,385	C→G	9.1%	G2617A (GGC→GCC) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,823,386	C→G	9.1%	G2617R (GGC→CGC) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,826,490	Δ1 bp	12.2%	coding (4745/12954 nt)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,835,842	Δ1 bp	8.9%	coding (147/693 nt)	PP_4249 ←	hypothetical protein
RA	4,840,256	G→T	8.1%	A193S (GCC→TCC)	ccoN‑II →	cbb3‑type cytochrome c oxidase subunit 1
RA	4,842,941	Δ1 bp	10.9%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,949:1	+G	12.3%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,848,198	T→C	6.2%	L81P (CTG→CCG) ‡	PP_4263 →	cytochrome biogenesis protein
RA	4,848,199	G→A	6.2%	L81L (CTG→CTA) ‡	PP_4263 →	cytochrome biogenesis protein
RA	4,850,203	C→T	14.4%	intergenic (+75/‑112)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,204	C→G	14.3%	intergenic (+76/‑111)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,205	A→G	14.5%	intergenic (+77/‑110)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,851,736	T→A	7.7%	intergenic (+83/+36)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,851,737	T→A	7.7%	intergenic (+84/+35)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,881,249	T→A	10.4%	V96D (GTC→GAC)	uacT →	uric acid permease
RA	4,894,256	G→A	7.7%	R160H (CGC→CAC)	PP_4302 →	urea transporter
RA	4,894,259	G→C	7.6%	G161A (GGC→GCC)	PP_4302 →	urea transporter
RA	4,894,262	T→C	8.7%	V162A (GTG→GCG)	PP_4302 →	urea transporter
RA	4,896,444	T→C	9.9%	intergenic (+32/‑176)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,900,110	A→G	15.7%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,114	G→A	12.0%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,115	T→C	12.0%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,119	C→T	12.0%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,908,070	G→C	8.5%	intergenic (‑1/‑281)	PP_4317 ← / → PP_4318	hypothetical protein/transposase
RA	4,908,071	G→C	10.6%	intergenic (‑2/‑280)	PP_4317 ← / → PP_4318	hypothetical protein/transposase
RA	4,918,011	T→C	6.1%	V122A (GTC→GCC)	PP_4328 →	hypothetical protein
RA	4,951,017	T→G	14.0%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,951,018	C→A	14.2%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,957,744	C→G	5.8%	G334A (GGC→GCC)	fliG ←	flagellar motor switch protein
RA	4,957,747	T→A	5.8%	K333M (AAG→ATG)	fliG ←	flagellar motor switch protein
RA	4,963,068	G→A	6.3%	A211V (GCC→GTC)	fleS ←	two‑component system sensor histidine kinase FleS
RA	4,967,684	A→G	6.3%	V13A (GTC→GCC)	fliD ←	flagellar filament capping protein
RA	4,967,686	G→T	6.3%	G12G (GGC→GGA)	fliD ←	flagellar filament capping protein
RA	4,967,691	A→C	6.0%	S11A (TCC→GCC)	fliD ←	flagellar filament capping protein
RA	4,967,693	C→T	6.0%	G10D (GGC→GAC)	fliD ←	flagellar filament capping protein
RA	4,970,038	T→G	9.8%	T84P (ACT→CCT)	fliC ←	flagellin
RA	4,978,160	C→T	12.4%	R162H (CGC→CAC)	flgH ←	flagellar L‑ring protein
RA	4,978,163	A→G	12.0%	V161A (GTG→GCG)	flgH ←	flagellar L‑ring protein
RA	4,986,096	C→G	5.3%	P97R (CCG→CGG)	flgA →	flagella basal body P‑ring formation protein
RA	5,030,796	A→G	21.0%	intergenic (+34/‑461)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,030,799	C→T	21.1%	intergenic (+37/‑458)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,039,700	G→T	7.4%	I284I (ATC→ATA) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,039,701	A→C	7.6%	I284S (ATC→AGC) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,051,619	G→C	12.1%	P315A (CCG→GCG)	PP_4452 ←	NAD/NADP octopine/nopaline dehydrogenase family protein
RA	5,077,282	G→T	8.2%	intergenic (+29/+79)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,285	A→C	8.3%	intergenic (+32/+76)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,105,711	T→C	6.5%	S817G (AGC→GGC)	ydiJ ←	putative oxidoreductase
RA	5,105,716	G→A	8.0%	P815L (CCG→CTG)	ydiJ ←	putative oxidoreductase
RA	5,172,360	G→A	11.3%	G216G (GGC→GGT)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,292	T→C	9.7%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,295	G→C	12.2%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,296	G→C	10.3%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,299	G→A	10.1%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,182,107	G→T	14.0%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,113	T→G	14.2%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,114	C→A	14.0%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,120	A→C	15.5%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,194,935	T→G	22.5%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,936	C→A	23.2%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,232,102	C→G	9.1%	A214A (GCG→GCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,232,105	C→G	9.1%	P213P (CCG→CCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,241,031	T→G	7.4%	L182R (CTG→CGG)	PP_4618 →	hypothetical protein
RA	5,255,724	A→T	6.8%	Q69L (CAG→CTG)	folM →	bifunctional dihydrofolate reductase/dihydromonapterin reductase
RA	5,255,730	G→T	7.4%	G71V (GGC→GTC)	folM →	bifunctional dihydrofolate reductase/dihydromonapterin reductase
RA	5,268,999	T→A	15.0%	intergenic (+19/+17)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,269,000	T→A	15.0%	intergenic (+20/+16)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,297,286	A→T	7.5%	L42H (CTC→CAC)	TpbB ←	diguanylate cyclase
RA	5,297,289	A→T	7.4%	V41E (GTG→GAG)	TpbB ←	diguanylate cyclase
RA	5,313,324	C→G	25.4%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,313,327	C→G	25.7%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,318,049	T→C	8.1%	Q458R (CAG→CGG)	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,341,861	G→C	6.2%	V41V (GTG→GTC)	panC →	pantothenate synthetase
RA	5,344,515	C→G	9.7%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,519	C→T	9.4%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,528	A→G	10.6%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,532	C→G	10.9%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,537	Δ1 bp	9.1%	intergenic (+64/‑114)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,538	Δ1 bp	8.9%	intergenic (+65/‑113)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,315	C→A	13.9%	V555V (GTC→GTA)	acsA‑II →	acetyl‑CoA synthetase
RA	5,346,316	T→G	12.0%	Y556D (TAC→GAC)	acsA‑II →	acetyl‑CoA synthetase
RA	5,352,025	G→T	9.8%	intergenic (‑230/+34)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,352,028	A→C	9.6%	intergenic (‑233/+31)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,364,611	A→T	11.8%	V24D (GTC→GAC)	folP ←	dihydropteroate synthase
RA	5,382,318	A→T	11.9%	I125F (ATC→TTC)	smpB →	SsrA‑binding protein
RA	5,389,408	T→C	9.5%	intergenic (+59/‑261)	dld2 → / → PP_4738	D‑lactate dehydrogenase/hypothetical protein
RA	5,389,415	G→A	5.5%	intergenic (+66/‑254)	dld2 → / → PP_4738	D‑lactate dehydrogenase/hypothetical protein
RA	5,389,432	T→C	8.2%	intergenic (+83/‑237)	dld2 → / → PP_4738	D‑lactate dehydrogenase/hypothetical protein
RA	5,389,435	C→T	8.3%	intergenic (+86/‑234)	dld2 → / → PP_4738	D‑lactate dehydrogenase/hypothetical protein
RA	5,390,479	T→G	7.1%	intergenic (+520/‑202)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,390,480	C→A	6.9%	intergenic (+521/‑201)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,427,024	A→G	7.3%	I376T (ATC→ACC)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,427,329	G→A	10.8%	I274I (ATC→ATT)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,427,336	T→A	10.4%	D272V (GAC→GTC)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,427,343	T→C	7.3%	N270D (AAT→GAT)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,429,807	T→G	8.2%	E24A (GAG→GCG) ‡	PP_4768 ←	exonuclease
RA	5,429,808	C→A	8.0%	E24* (GAG→TAG) ‡	PP_4768 ←	exonuclease
RA	5,440,613	G→A	7.4%	T87T (ACC→ACT)	amn ←	AMP nucleosidase
RA	5,443,931	A→C	6.6%	P299P (CCT→CCG)	PP_4781 ←	sensor histidine kinase
RA	5,444,978	A→G	5.3%	intergenic (‑151/‑115)	PP_4781 ← / → thiD	sensor histidine kinase/phosphomethylpyrimidine kinase
RA	5,451,660	A→G	6.1%	E48G (GAG→GGG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,664	C→G	5.9%	L49L (CTC→CTG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,668	C→T	5.7%	P51S (CCG→TCG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,458,940:1	+A	10.5%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,946	Δ1 bp	10.0%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,462,441	Δ1 bp	9.4%	intergenic (+16/+18)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,462,443:1	+A	9.4%	intergenic (+18/+16)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,485,198	A→G	9.8%	intergenic (+56/‑91)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,201	A→G	8.7%	intergenic (+59/‑88)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,202	T→C	9.7%	intergenic (+60/‑87)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,207	G→A	9.8%	intergenic (+65/‑82)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,210	T→C	8.6%	intergenic (+68/‑79)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,215	G→A	10.1%	intergenic (+73/‑74)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,216	C→T	8.7%	intergenic (+74/‑73)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,219	C→T	8.7%	intergenic (+77/‑70)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,503,183	C→A	7.9%	L29M (CTG→ATG) ‡	oprC →	copper receptor OprC
RA	5,503,184	T→G	8.1%	L29R (CTG→CGG) ‡	oprC →	copper receptor OprC
RA	5,503,190	C→G	11.6%	A31G (GCC→GGC)	oprC →	copper receptor OprC
RA	5,503,196	C→A	12.8%	P33H (CCT→CAT) ‡	oprC →	copper receptor OprC
RA	5,503,197	T→G	11.1%	P33P (CCT→CCG) ‡	oprC →	copper receptor OprC
RA	5,525,818	C→A	9.6%	intergenic (+60/‑63)	PP_4858 → / → PP_4859	hypothetical protein/TetR family transcriptional regulator
RA	5,525,821	T→G	9.4%	intergenic (+63/‑60)	PP_4858 → / → PP_4859	hypothetical protein/TetR family transcriptional regulator
RA	5,532,084	G→C	9.8%	P79P (CCC→CCG) ‡	braE ←	high‑affinity branched‑chain amino acid ABC transporter permease BraE
RA	5,532,085	G→C	9.6%	P79R (CCC→CGC) ‡	braE ←	high‑affinity branched‑chain amino acid ABC transporter permease BraE
RA	5,537,106	A→T	5.4%	intergenic (+35/+68)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,109	A→C	5.4%	intergenic (+38/+65)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,545,683	T→C	20.5%	intergenic (‑775/+102)	rpsF ← / ← rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,546,501	G→A	7.5%	H11Y (CAC→TAC)	rlmB ←	23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,546,502	T→C	7.5%	V10V (GTA→GTG)	rlmB ←	23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,580,975	G→T	9.3%	intergenic (‑60/‑42)	serB ← / → PP_4910	phosphoserine phosphatase/hypothetical protein
RA	5,602,232	T→A	7.0%	D434V (GAT→GTT)	PP_4924 ←	subtilase family serine protease
RA	5,602,235	G→C	6.8%	A433G (GCC→GGC)	PP_4924 ←	subtilase family serine protease
RA	5,602,238	T→A	6.9%	N432I (AAC→ATC)	PP_4924 ←	subtilase family serine protease
RA	5,602,473	G→T	9.3%	L354M (CTG→ATG)	PP_4924 ←	subtilase family serine protease
RA	5,610,696	G→C	5.2%	S20S (TCG→TCC)	emrE →	small multidrug resistance protein
RA	5,613,586	T→A	6.5%	G162G (GGT→GGA)	PP_4933 →	hypothetical protein
RA	5,623,447	A→C	7.8%	P114P (CCT→CCG)	PP_4941 ←	hypothetical protein
RA	5,625,146	C→A	7.6%	P222P (CCG→CCT)	PP_4943 ←	glycosyl transferase
RA	5,625,151	G→C	7.3%	L221V (CTG→GTG)	PP_4943 ←	glycosyl transferase
RA	5,625,156	T→G	9.5%	Q219P (CAG→CCG)	PP_4943 ←	glycosyl transferase
RA	5,634,508	T→G	14.3%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,634,509	C→A	14.3%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,640,452	G→T	9.3%	A22S (GCC→TCC)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,651,425	T→G	11.7%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,428	C→A	13.2%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,655,677:1	+A	35.0%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,682	T→G	46.2%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,687	C→A	44.0%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,692	Δ1 bp	41.7%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,656,955	A→C	8.6%	L264R (CTG→CGG)	tktA ←	transketolase A
RA	5,656,958	G→T	8.0%	P263Q (CCG→CAG)	tktA ←	transketolase A
RA	5,660,295	C→G	8.7%	intergenic (+97/‑132)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,668,027	G→T	8.3%	intergenic (+12/‑29)	PP_mr59 → / → ahcY	SAH_riboswitch regulatory region/adenosylhomocysteinase
RA	5,679,484	C→T	9.8%	T353M (ACG→ATG)	bioA →	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
RA	5,679,489	A→G	11.3%	M355V (ATG→GTG)	bioA →	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
RA	5,685,956	G→C	8.5%	P331P (CCC→CCG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,958	G→C	8.5%	P331A (CCC→GCC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,697,369:1	+A	9.2%	intergenic (+23/‑54)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,697,374	T→G	12.3%	intergenic (+28/‑49)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,698,210	A→C	10.9%	K263T (AAG→ACG)	hslU →	protease HslVU ATPase subunit
RA	5,698,213	G→T	11.1%	R264L (CGT→CTT)	hslU →	protease HslVU ATPase subunit
RA	5,734,835	G→C	7.9%	T295T (ACC→ACG)	hutH ←	histidine ammonia‑lyase
RA	5,737,655	G→C	18.3%	intergenic (‑154/+48)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,737,658	G→C	19.2%	intergenic (‑157/+45)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,740,523	T→G	10.8%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,526	A→T	10.5%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,527	A→T	10.5%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,530	C→A	9.5%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,741,940	G→C	6.8%	D90E (GAC→GAG) ‡	PP_5039 ←	hypothetical protein
RA	5,741,941	T→G	7.0%	D90A (GAC→GCC) ‡	PP_5039 ←	hypothetical protein
RA	5,741,946	C→T	7.4%	E88E (GAG→GAA)	PP_5039 ←	hypothetical protein
RA	5,741,951	A→G	7.5%	F87L (TTC→CTC)	PP_5039 ←	hypothetical protein
RA	5,741,956	C→A	7.8%	R85L (CGC→CTC) ‡	PP_5039 ←	hypothetical protein
RA	5,741,957	G→C	8.0%	R85G (CGC→GGC) ‡	PP_5039 ←	hypothetical protein
RA	5,743,903	A→C	10.0%	L673R (CTC→CGC)	glgP ←	glycogen phosphorylase
RA	5,743,906	G→T	10.7%	A672E (GCG→GAG)	glgP ←	glycogen phosphorylase
RA	5,750,485	A→T	17.6%	L378L (CTT→CTA) ‡	thiI ←	tRNA sulfurtransferase
RA	5,750,486	A→T	18.8%	L378H (CTT→CAT) ‡	thiI ←	tRNA sulfurtransferase
RA	5,753,541	T→G	14.6%	intergenic (+46/‑320)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,753,542	C→A	15.6%	intergenic (+47/‑319)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,755,182	C→G	10.3%	I80M (ATC→ATG)	glnG →	two‑component system DNA‑binding response regulator GlnL/GlnG
RA	5,755,185	C→G	9.5%	I81M (ATC→ATG)	glnG →	two‑component system DNA‑binding response regulator GlnL/GlnG
RA	5,758,222:1	+C	9.4%	intergenic (+190/+328)	PP_5050 → / ← PP_5051	transposase/hypothetical protein
RA	5,758,225	A→T	9.4%	intergenic (+193/+325)	PP_5050 → / ← PP_5051	transposase/hypothetical protein
RA	5,758,226	A→T	9.0%	intergenic (+194/+324)	PP_5050 → / ← PP_5051	transposase/hypothetical protein
RA	5,758,227	A→T	9.4%	intergenic (+195/+323)	PP_5050 → / ← PP_5051	transposase/hypothetical protein
RA	5,758,231	Δ1 bp	9.4%	intergenic (+199/+319)	PP_5050 → / ← PP_5051	transposase/hypothetical protein
RA	5,763,903	T→C	9.1%	V408A (GTT→GCT)	PP_5057 →	M23/M37 family peptidase
RA	5,763,906	G→T	9.1%	G409V (GGC→GTC)	PP_5057 →	M23/M37 family peptidase
RA	5,763,909	A→C	9.7%	D410A (GAC→GCC)	PP_5057 →	M23/M37 family peptidase
RA	5,763,912	G→A	9.9%	S411N (AGC→AAC)	PP_5057 →	M23/M37 family peptidase
RA	5,786,527	C→T	7.6%	intergenic (+14/‑117)	PP_5068 → / → trxC	hypothetical protein/thioredoxin
RA	5,790,189	G→T	10.5%	intergenic (+12/+56)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,940	G→C	9.4%	A278A (GCC→GCG) ‡	hemE ←	uroporphyrinogen decarboxylase
RA	5,790,941	G→C	9.4%	A278G (GCC→GGC) ‡	hemE ←	uroporphyrinogen decarboxylase
RA	5,803,118	C→T	6.8%	A246T (GCA→ACA)	PP_5081 ←	type IV pili biogenesis protein
RA	5,815,587	C→T	7.7%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,592	G→T	7.8%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,595	A→C	8.4%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,600	A→G	9.1%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,822,935	G→A	8.2%	L136L (CTG→CTA)	rdgB →	dITP/XTP pyrophosphatase
RA	5,828,010	C→G	7.1%	intergenic (+156/+43)	mtgA → / ← rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
RA	5,864,777	G→A	7.0%	A477V (GCG→GTG)	cadA‑III ←	cadmium translocating P‑type ATPase
RA	5,866,752	G→T	10.0%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,866,753	A→C	9.9%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,874,875	G→T	10.5%	S451* (TCG→TAG) ‡	ilvA‑II ←	threonine deaminase
RA	5,874,876	A→C	10.5%	S451A (TCG→GCG) ‡	ilvA‑II ←	threonine deaminase
RA	5,879,191	T→C	6.9%	intergenic (‑139/+44)	PP_5152 ← / ← ycgM	hypothetical protein/isomerase/hydrolase
RA	5,897,995	G→C	7.0%	Y983* (TAC→TAG)	PP_5173 ←	RND family transporter
RA	5,897,998	G→C	8.6%	A982A (GCC→GCG)	PP_5173 ←	RND family transporter
RA	5,903,220	G→T	7.5%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,221	A→C	8.5%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,887	G→A	8.9%	intergenic (+87/+20)	PP_5176 → / ← spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
RA	5,906,204	G→A	8.7%	T218I (ACC→ATC) ‡	spuF ←	spermidine/putrescine ABC transporter ATP binding protein
RA	5,906,205	T→C	8.8%	T218A (ACC→GCC) ‡	spuF ←	spermidine/putrescine ABC transporter ATP binding protein
RA	5,914,167	G→A	6.7%	intergenic (+3/+150)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,180	C→T	10.0%	intergenic (+16/+137)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,182	C→G	9.8%	intergenic (+18/+135)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,184	A→G	9.5%	intergenic (+20/+133)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,923,762	A→C	6.2%	L242R (CTG→CGG)	gcvP‑II ←	glycine dehydrogenase
RA	5,931,339	C→G	6.1%	V263L (GTT→CTT)	ubiH ←	2‑octaprenyl‑6‑methoxyphenyl hydroxylase
RA	5,963,902	T→G	11.9%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,963,907	C→A	10.7%	I217I (ATC→ATA)	PP_5229 →	hypothetical protein
RA	5,966,388	A→T	10.4%	intergenic (‑401/+29)	PP_5232 ← / ← amtB	hypothetical protein/ammonium transporter AmtB
RA	5,966,389	A→T	10.4%	intergenic (‑402/+28)	PP_5232 ← / ← amtB	hypothetical protein/ammonium transporter AmtB
RA	5,984,492	T→C	13.6%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,498	G→A	11.8%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,500	T→C	13.7%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,503	G→A	13.6%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,505	T→C	14.3%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,988,865	G→A	32.5%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,875	T→C	30.9%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,880	C→T	30.6%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,881	G→T	30.2%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,882	C→T	28.9%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,885	A→G	29.6%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,891	G→C	32.7%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,893	C→G	31.5%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,896	C→T	30.5%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,900	C→G	33.6%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,904	C→T	31.0%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,906	C→T	31.7%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,945	C→A	35.6%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,950	C→T	34.2%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,951	A→G	34.1%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,961	T→C	39.2%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,967	Δ1 bp	34.2%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,994,718	G→A	7.8%	L463L (TTG→TTA)	PP_5251 →	transporter
RA	6,002,088	T→C	9.7%	E90G (GAG→GGG)	amaA ←	L‑pipecolate oxidase
RA	6,002,094	T→A	10.5%	D88V (GAC→GTC)	amaA ←	L‑pipecolate oxidase
RA	6,002,100	G→A	9.3%	P86L (CCC→CTC)	amaA ←	L‑pipecolate oxidase
RA	6,005,043	T→G	9.6%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,050	G→C	12.8%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,053	A→T	12.8%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,056	G→C	13.1%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,063	C→A	8.8%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,007,160	C→T	11.1%	V152I (GTA→ATA)	PP_5261 ←	LysR family transcriptional regulator
RA	6,027,278	A→T	7.0%	F212Y (TTC→TAC) ‡	PP_5277 ←	MFS transporter
RA	6,027,279	A→T	6.9%	F212I (TTC→ATC) ‡	PP_5277 ←	MFS transporter
RA	6,030,399	C→A	9.2%	intergenic (+28/+39)	PP_5729 → / ← rpmG	hypothetical protein/50S ribosomal protein L33
RA	6,030,403	T→G	9.6%	intergenic (+32/+35)	PP_5729 → / ← rpmG	hypothetical protein/50S ribosomal protein L33
RA	6,030,404	T→A	9.1%	intergenic (+33/+34)	PP_5729 → / ← rpmG	hypothetical protein/50S ribosomal protein L33
RA	6,030,405	T→A	8.8%	intergenic (+34/+33)	PP_5729 → / ← rpmG	hypothetical protein/50S ribosomal protein L33
RA	6,030,410	T→G	10.8%	intergenic (+39/+28)	PP_5729 → / ← rpmG	hypothetical protein/50S ribosomal protein L33
RA	6,040,850	T→A	21.8%	intergenic (+19/+15)	PP_5292 → / ← PP_5293	catabolite repression control protein/hypothetical protein
RA	6,043,722	T→A	9.7%	intergenic (+18/+16)	gmk → / ← PP_5297	deoxyguanylate kinase/guanylate kinase/amino acid transporter
RA	6,048,351	C→G	12.7%	P257R (CCT→CGT)	PP_5300 →	LysR family transcriptional regulator
RA	6,048,354	C→G	13.0%	T258R (ACG→AGG)	PP_5300 →	LysR family transcriptional regulator
RA	6,051,724	C→A	8.8%	intergenic (+17/‑40)	ridA → / → PP_5304	aminoacrylate/iminopropionate hydrolase/deaminase/lipoprotein
RA	6,051,725	C→G	9.0%	intergenic (+18/‑39)	ridA → / → PP_5304	aminoacrylate/iminopropionate hydrolase/deaminase/lipoprotein
RA	6,051,726	T→G	8.9%	intergenic (+19/‑38)	ridA → / → PP_5304	aminoacrylate/iminopropionate hydrolase/deaminase/lipoprotein
RA	6,060,559	C→A	7.4%	intergenic (+139/+42)	PP_5311 → / ← PP_5312	signal transduction protein/hypothetical protein
RA	6,081,044	T→A	21.8%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,081,045	T→A	20.9%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,104,045	T→A	6.2%	P274P (CCT→CCA)	PP_5353 →	hypothetical protein
RA	6,104,046	T→A	6.3%	W275R (TGG→AGG)	PP_5353 →	hypothetical protein
RA	6,111,244	G→C	10.2%	P108A (CCA→GCA)	PP_5361 ←	protein P47K
RA	6,112,033	T→A	17.4%	H118Q (CAT→CAA)	PP_5362 →	hypothetical protein
RA	6,113,849	G→A	5.9%	S308N (AGC→AAC)	clsA →	cardiolipin synthase
RA	6,130,169	G→C	5.2%	A107G (GCC→GGC)	PP_5378 ←	metal‑binding protein
RA	6,132,191	C→G	11.5%	G573A (GGC→GCC)	copA‑II ←	copper resistance protein A
RA	6,137,661	G→A	6.4%	L20L (CTG→CTA)	czcC →	CzcC family metal RND transporter outer membrane protein
RA	6,171,838	C→A	7.3%	A174S (GCA→TCA)	glmS ←	L‑glutamine/D‑fructose‑6‑phosphate aminotransferase

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	171379–172965	176289–172967	3–4911	15 [14]	[14] 15	PP_16SA–[PP_5SA]	PP_16SA,PP_23SA,[PP_5SA]
*	*	÷	NC_002947	176637–178395	181720–178397	3–5084	16 [14]	[14] 17	PP_16SB–[PP_r01]	PP_16SB,PP_23SB,[PP_r01]
*	*	÷	NC_002947	4808205	4808218	14	28 [0]	[0] 41	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 50553	44 (0.980)	4 (0.090)	4/240	NT	7.9%	coding (97/1251 nt)	czcB‑I	cobalt‑zinc‑cadmium resistance protein
	?	NC_002947	= 50589	51 (1.170)					coding (61/1251 nt)	czcB‑I	cobalt‑zinc‑cadmium resistance protein
*	?	NC_002947	= 60790	39 (0.860)	8 (0.180)	7/242	NT	17.8%	intergenic (‑182/‑41)	PP_0051/PP_0052	sigma‑54 dependent transcriptional regulator/beta‑lactamase domain‑containing protein
	?	NC_002947	= 60808	36 (0.820)					intergenic (‑200/‑23)	PP_0051/PP_0052	sigma‑54 dependent transcriptional regulator/beta‑lactamase domain‑containing protein
*	?	NC_002947	= 63729	48 (1.060)	4 (0.090)	4/232	NT	7.4%	coding (748/858 nt)	PP_0054	membrane protein
	?	NC_002947	= 63769	55 (1.300)					coding (788/858 nt)	PP_0054	membrane protein
*	?	NC_002947	73699 =	47 (1.040)	4 (0.090)	4/244	NT	8.0%	coding (175/888 nt)	PP_0063	lipid A biosynthesis lauroyl acyltransferase
	?	NC_002947	73721 =	46 (1.040)					coding (197/888 nt)	PP_0063	lipid A biosynthesis lauroyl acyltransferase
*	?	NC_002947	= 80992	57 (1.260)	6 (0.140)	6/228	NT	8.6%	intergenic (+49/‑85)	tsaC/PP_5425	threonylcarbamoyl‑AMP synthase/hypothetical protein
	?	NC_002947	= 81051	75 (1.810)					intergenic (+108/‑26)	tsaC/PP_5425	threonylcarbamoyl‑AMP synthase/hypothetical protein
*	?	NC_002947	86750 =	56 (1.240)	6 (0.150)	5/216	NT	11.0%	intergenic (‑33/+112)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	86841 =	48 (1.220)					intergenic (‑124/+21)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	= 114130	40 (0.890)	3 (0.070)	3/230	NT	7.7%	coding (88/582 nt)	PP_0108	hypothetical protein
	?	NC_002947	= 114151	35 (0.840)					coding (109/582 nt)	PP_0108	hypothetical protein
*	?	NC_002947	174139 =	NA (NA)	4 (0.090)	4/240	NT	NA	noncoding (937/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	174165 =	NA (NA)					noncoding (963/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	175738 =	NA (NA)	7 (0.160)	6/238	NT	NA	noncoding (2536/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	175753 =	NA (NA)					noncoding (2551/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	= 176399	NA (NA)	27 (0.620) +CGAAA	9/238	NT	34.7%	intergenic (+43/‑420)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 182013	53 (1.170)					intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
*	?	NC_002947	185347 =	52 (1.150)	5 (0.120)	6/236	NT	9.1%	coding (266/957 nt)	PP_0161	putative transmembrane sensor
	?	NC_002947	185384 =	50 (1.160)					coding (229/957 nt)	PP_0161	putative transmembrane sensor
*	?	NC_002947	186031 =	35 (0.780)	7 (0.170)	7/232	NT	18.0%	coding (108/522 nt)	PP_0162	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	186060 =	31 (0.730)					coding (79/522 nt)	PP_0162	ECF family RNA polymerase sigma‑70 factor
*	?	NC_002947	189530 =	40 (0.890)	4 (0.090)	4/238	NT	9.5%	coding (1639/1947 nt)	PP_0165	GGDEF domain‑containing protein
	?	NC_002947	189561 =	38 (0.880)					coding (1670/1947 nt)	PP_0165	GGDEF domain‑containing protein
*	?	NC_002947	= 195962	88 (1.950)	9 (0.200)	6/246	NT	10.8%	coding (1468/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 197443	62 (1.390)					coding (2949/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	205042 =	13 (0.290)	10 (0.230)	4/240	NT	44.3%	coding (10548/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	208443 =	NA (NA)					coding (13949/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 219919	47 (1.040)	6 (0.140)	5/240	NT	11.0%	coding (25425/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 219942	52 (1.190)					coding (25448/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	235331 =	51 (1.130)	17 (0.430)	8/216	NT	28.0%	intergenic (+28/+97)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	235390 =	43 (1.090)					intergenic (+87/+38)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	= 250236	36 (0.800)	5 (0.120)	4/228	NT	13.3%	coding (967/1347 nt)	nfeD	membrane bound peptidase NefD
	?	NC_002947	= 250260	32 (0.770)					coding (943/1347 nt)	nfeD	membrane bound peptidase NefD
*	?	NC_002947	= 285663	58 (1.290)	3 (0.070)	3/232	NT	5.4%	coding (676/840 nt)	tauC	taurine ABC transporter permease
	?	NC_002947	= 285679	51 (1.210)					coding (660/840 nt)	tauC	taurine ABC transporter permease
*	?	NC_002947	309592 =	55 (1.220)	4 (0.090)	4/236	NT	7.0%	coding (244/483 nt)	PP_0255	hypothetical protein
	?	NC_002947	309627 =	54 (1.260)					coding (209/483 nt)	PP_0255	hypothetical protein
*	?	NC_002947	= 312731	48 (1.060)	8 (0.200)	4/220	NT	15.0%	coding (483/831 nt)	fdhD	protein sulfur transferase
	?	NC_002947	= 312759	48 (1.200)					coding (455/831 nt)	fdhD	protein sulfur transferase
*	?	NC_002947	= 324741	30 (0.660)	6 (0.140)	6/234	NT	16.1%	coding (25/1320 nt)	oprQ	outer‑membrane porin D
	?	NC_002947	= 324766	34 (0.800)					coding (50/1320 nt)	oprQ	outer‑membrane porin D
*	?	NC_002947	344650 =	38 (0.840)	6 (0.140)	6/242	NT	14.1%	coding (956/1068 nt)	mutY	A/G‑specific adenine glycosylase
	?	NC_002947	344698 =	36 (0.820)					coding (908/1068 nt)	mutY	A/G‑specific adenine glycosylase
*	?	NC_002947	345300 =	31 (0.690)	3 (0.070)	3/234	NT	9.1%	coding (306/1068 nt)	mutY	A/G‑specific adenine glycosylase
	?	NC_002947	345333 =	31 (0.730)					coding (273/1068 nt)	mutY	A/G‑specific adenine glycosylase
*	?	NC_002947	363437 =	65 (1.440)	4 (0.090)	4/236	NT	6.4%	coding (49/966 nt)	lcdH	L‑carnitine dehydrogenase
	?	NC_002947	363457 =	56 (1.300)					coding (29/966 nt)	lcdH	L‑carnitine dehydrogenase
*	?	NC_002947	= 380858	25 (0.550)	11 (0.300)	10/202	NT	32.2%	intergenic (+45/+64)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	= 380892	26 (0.710)					intergenic (+79/+30)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
*	?	NC_002947	401305 =	18 (0.400)	7 (0.160)	5/240	NT	17.9%	coding (888/1059 nt)	PP_0334	transposase
	?	NC_002947	3969005 =	47 (1.080)					coding (1089/1179 nt)	PP_3498	transposase
*	?	NC_002947	= 401316	NA (NA)	7 (0.170)	7/222	NT	16.0%	coding (899/1059 nt)	PP_0334	transposase
	?	NC_002947	= 401372	41 (0.910)					coding (955/1059 nt)	PP_0334	transposase
*	?	NC_002947	= 403253	56 (1.240)	7 (0.170)	7/228	NT	11.5%	intergenic (‑53/+116)	msrA/PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
	?	NC_002947	= 403315	56 (1.350)					intergenic (‑115/+54)	msrA/PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
*	?	NC_002947	413997 =	38 (0.840)	11 (0.310)	10/192	NT	35.8%	intergenic (+14/‑189)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	414083 =	10 (0.290)					intergenic (+100/‑103)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	445062 =	47 (1.040)	6 (0.170)	5/194	NT	15.6%	intergenic (+32/‑256)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
	?	NC_002947	445155 =	28 (0.790)					intergenic (+125/‑163)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
*	?	NC_002947	463222 =	74 (1.640)	5 (0.120)	4/236	NT	7.8%	coding (181/795 nt)	davA	5‑aminopentanamidase
	?	NC_002947	463257 =	48 (1.120)					coding (146/795 nt)	davA	5‑aminopentanamidase
*	?	NC_002947	478264 =	49 (1.090)	4 (0.120)	3/188	NT	10.5%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	31 (0.910)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	= 499220	44 (0.980)	4 (0.110)	4/200	NT	9.3%	intergenic (+61/‑235)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
	?	NC_002947	= 499259	43 (1.180)					intergenic (+100/‑196)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	526239 =	NA (NA)	6 (0.140)	6/234	NT	NA	noncoding (1288/1522 nt)	PP_16SC	16S ribosomal RNA
	?	NC_002947	526261 =	NA (NA)					noncoding (1310/1522 nt)	PP_16SC	16S ribosomal RNA
*	?	NC_002947	= 607697	57 (1.260)	3 (0.070)	3/234	NT	5.3%	coding (598/618 nt)	ribA	GTP cyclohydrolase II
	?	NC_002947	= 607750	54 (1.270)					coding (37/420 nt)	PP_0523	membrane protein
*	?	NC_002947	619377 =	70 (1.550)	4 (0.090)	4/240	NT	5.9%	coding (624/1329 nt)	pfeS‑I	histidine kinase
	?	NC_002947	619400 =	59 (1.350)					coding (601/1329 nt)	pfeS‑I	histidine kinase
*	?	NC_002947	625684 =	45 (1.000)	3 (0.070)	3/234	NT	6.6%	intergenic (‑65/+28)	ppa/mtfA	inorganic pyrophosphatase/glucose‑regulated peptidase
	?	NC_002947	625723 =	42 (0.990)					coding (805/816 nt)	mtfA	glucose‑regulated peptidase
*	?	NC_002947	= 630222	55 (1.220)	5 (0.120)	5/232	NT	8.8%	intergenic (‑22/+25)	eutB/PP_0544	ethanolamine ammonia‑lyase subunit alpha/ethanolamine transporter
	?	NC_002947	= 630226	52 (1.230)					intergenic (‑26/+21)	eutB/PP_0544	ethanolamine ammonia‑lyase subunit alpha/ethanolamine transporter
*	?	NC_002947	631913 =	64 (1.420)	3 (0.070) +GGCCTTC	3/234	NT	5.0%	intergenic (‑218/+10)	PP_0544/aldB‑I	ethanolamine transporter/aldehyde dehydrogenase
	?	NC_002947	= 3070568	56 (1.240)					intergenic (+93/‑261)	aldB‑II/pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
*	?	NC_002947	= 642462	76 (1.680)	4 (0.090)	4/240	NT	5.2%	coding (528/1107 nt)	acoC	acetoin cleaving system dihydrolipoyllysine‑residue acetyltransferase
	?	NC_002947	= 642490	73 (1.670)					coding (500/1107 nt)	acoC	acetoin cleaving system dihydrolipoyllysine‑residue acetyltransferase
*	?	NC_002947	647234 =	53 (1.170)	6 (0.140)	6/232	NT	11.7%	coding (854/1854 nt)	acoR	acetoin catabolism regulatory protein
	?	NC_002947	647262 =	41 (0.970)					coding (882/1854 nt)	acoR	acetoin catabolism regulatory protein
*	?	NC_002947	= 652785	31 (0.690)	12 (0.320)	10/208	NT	48.0%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	0 (0.000)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
*	?	NC_002947	661518 =	57 (1.260)	8 (0.190)	7/234	NT	12.2%	intergenic (+25/+102)	PP_0568/PP_0569	hypothetical protein/MATE efflux family protein
	?	NC_002947	661599 =	61 (1.430)					intergenic (+106/+21)	PP_0568/PP_0569	hypothetical protein/MATE efflux family protein
*	?	NC_002947	671774 =	50 (1.110)	4 (0.090)	5/238	NT	8.2%	coding (826/1725 nt)	PP_0573	hypothetical protein
	?	NC_002947	671798 =	42 (0.970)					coding (850/1725 nt)	PP_0573	hypothetical protein
*	?	NC_002947	675401 =	65 (1.440)	3 (0.070)	3/226	NT	5.2%	coding (301/696 nt)	PP_0577	hypothetical protein
	?	NC_002947	675451 =	51 (1.240)					coding (251/696 nt)	PP_0577	hypothetical protein
*	?	NC_002947	= 688294	52 (1.150)	3 (0.070)	3/234	NT	5.8%	coding (1156/1182 nt)	ydgK	Bcr/CflA family multidrug resistance transporter
	?	NC_002947	= 688338	48 (1.130)					coding (14/183 nt)	PP_5446	hypothetical protein
*	?	NC_002947	= 739194	38 (0.840)	7 (0.160)	6/234	NT	14.9%	coding (225/867 nt)	pilD	leader peptidase/N‑methyltransferase
	?	NC_002947	= 739205	44 (1.030)					coding (214/867 nt)	pilD	leader peptidase/N‑methyltransferase
*	?	NC_002947	742918 =	NA (NA)	11 (0.260)	10/236	NT	NA	coding (1016/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742948 =	NA (NA)					coding (1046/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 745621	NA (NA)	3 (0.070)	3/242	NT	NA	coding (881/1533 nt)	PP_0637	transposase
	?	NC_002947	= 745654	NA (NA)					coding (848/1533 nt)	PP_0637	transposase
*	?	NC_002947	= 796843	49 (1.090)	7 (0.180)	7/216	NT	13.1%	intergenic (+42/‑148)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
	?	NC_002947	= 796881	50 (1.270)					intergenic (+80/‑110)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
*	?	NC_002947	= 840427	46 (1.020)	4 (0.090)	4/238	NT	7.8%	coding (278/861 nt)	ispE	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase
	?	NC_002947	= 840463	50 (1.150)					coding (242/861 nt)	ispE	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase
*	?	NC_002947	850979 =	49 (1.090)	4 (0.090)	4/240	NT	7.5%	intergenic (‑559/‑246)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
	?	NC_002947	= 4908110	51 (1.170)					intergenic (‑41/‑241)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	874287 =	60 (1.330)	3 (0.080)	3/204	NT	6.4%	intergenic (+21/‑138)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
	?	NC_002947	874351 =	39 (1.050)					intergenic (+85/‑74)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
*	?	NC_002947	= 883865	13 (0.290)	13 (0.390)	9/184	NT	51.3%	intergenic (+100/‑228)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
	?	NC_002947	= 883875	15 (0.450)					intergenic (+110/‑218)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
*	?	NC_002947	= 907509	37 (0.820)	5 (0.110)	5/240	NT	11.9%	coding (705/777 nt)	yjjV	putative hydrolase
	?	NC_002947	= 907520	38 (0.870)					coding (694/777 nt)	yjjV	putative hydrolase
*	?	NC_002947	= 911206	52 (1.150)	4 (0.090)	4/238	NT	7.1%	coding (1711/2853 nt)	fruB	PTS fructose transporter subunit EI/HPr/IIA
	?	NC_002947	= 911242	54 (1.250)					coding (1747/2853 nt)	fruB	PTS fructose transporter subunit EI/HPr/IIA
*	?	NC_002947	= 913070	61 (1.350)	4 (0.090)	3/234	NT	6.7%	coding (722/948 nt)	fruK	1‑phosphofructokinase monomer
	?	NC_002947	= 913099	53 (1.240)					coding (751/948 nt)	fruK	1‑phosphofructokinase monomer
*	?	NC_002947	938937 =	53 (1.170)	4 (0.090)	4/236	NT	7.7%	coding (6688/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	938967 =	45 (1.050)					coding (6658/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	1009824 =	34 (0.750)	3 (0.070)	3/232	NT	8.4%	coding (515/942 nt)	PP_0870	glycine betaine/carnitine/choline ABC transporter substrate‑binding protein
	?	NC_002947	1009864 =	34 (0.810)					coding (475/942 nt)	PP_0870	glycine betaine/carnitine/choline ABC transporter substrate‑binding protein
*	?	NC_002947	1022041 =	38 (0.840)	5 (0.120)	5/234	NT	11.9%	intergenic (‑52/+40)	dppB/dppA‑I	dipeptide ABC transporter permease/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1022070 =	38 (0.890)					intergenic (‑81/+11)	dppB/dppA‑I	dipeptide ABC transporter permease/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	1037761 =	57 (1.260)	4 (0.090)	4/240	NT	7.4%	intergenic (+3/+113)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037865 =	45 (1.030)					intergenic (+107/+9)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1039888	55 (1.220)	4 (0.090)	4/232	NT	6.8%	coding (242/921 nt)	PP_0899	ferredoxin reductase
	?	NC_002947	= 1039926	59 (1.400)					coding (280/921 nt)	PP_0899	ferredoxin reductase
*	?	NC_002947	= 1064979	67 (1.480)	3 (0.070)	3/230	NT	5.2%	intergenic (+33/+80)	PP_0922/PP_0923	hypothetical protein/acyltransferase
	?	NC_002947	= 1065023	48 (1.150)					intergenic (+77/+36)	PP_0922/PP_0923	hypothetical protein/acyltransferase
*	?	NC_002947	= 1079313	54 (1.200)	6 (0.140)	6/240	NT	10.5%	coding (503/1458 nt)	rng	endoribonuclease G
	?	NC_002947	= 1079330	50 (1.140)					coding (520/1458 nt)	rng	endoribonuclease G
*	?	NC_002947	= 1083147	48 (1.060)	6 (0.140)	5/232	NT	11.2%	coding (2797/3822 nt)	PP_0938	hypothetical protein
	?	NC_002947	= 1083171	50 (1.180)					coding (2821/3822 nt)	PP_0938	hypothetical protein
*	?	NC_002947	1114875 =	42 (0.930)	8 (0.220)	7/198	NT	22.7%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114951 =	21 (0.580)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1175069 =	47 (1.040)	5 (0.110)	5/240	NT	10.4%	coding (138/558 nt)	PP_1030	hypothetical protein
	?	NC_002947	1175092 =	41 (0.940)					coding (161/558 nt)	PP_1030	hypothetical protein
*	?	NC_002947	1176666 =	61 (1.350)	4 (0.090)	4/240	NT	6.8%	coding (1091/1470 nt)	guaB	IMP dehydrogenase and single strand DNA binding factor
	?	NC_002947	1176687 =	50 (1.140)					coding (1112/1470 nt)	guaB	IMP dehydrogenase and single strand DNA binding factor
*	?	NC_002947	1177323 =	37 (0.820)	4 (0.090)	4/244	NT	9.3%	coding (200/1578 nt)	guaA	glutamine‑hydrolyzing GMP synthase
	?	NC_002947	1177348 =	42 (0.950)					coding (225/1578 nt)	guaA	glutamine‑hydrolyzing GMP synthase
*	?	NC_002947	1201848 =	41 (0.910)	4 (0.090)	4/238	NT	10.0%	coding (246/591 nt)	xcpW	type II secretion pathway protein XcpW
	?	NC_002947	1201887 =	33 (0.760)					coding (285/591 nt)	xcpW	type II secretion pathway protein XcpW
*	?	NC_002947	= 1215899	58 (1.290)	4 (0.090)	4/236	NT	6.5%	coding (1066/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	= 1215924	59 (1.370)					coding (1041/4305 nt)	PP_1061	ATP‑dependent DNA helicase
*	?	NC_002947	= 1223780	46 (1.020)	5 (0.120)	3/236	NT	10.1%	coding (272/771 nt)	gltL	glutamate/aspartate ABC transporter ATP binding protein
	?	NC_002947	= 1223795	45 (1.050)					coding (257/771 nt)	gltL	glutamate/aspartate ABC transporter ATP binding protein
*	?	NC_002947	1252741 =	61 (1.350)	6 (0.140)	5/240	NT	9.3%	coding (75/972 nt)	PP_1095	electron transport complex protein
	?	NC_002947	1252766 =	58 (1.330)					coding (50/972 nt)	PP_1095	electron transport complex protein
*	?	NC_002947	1265496 =	25 (0.550)	6 (0.140)	6/238	NT	16.4%	intergenic (‑71/+56)	PP_1106/quiP	hypothetical protein/acyl‑homoserine lactone acylase QuiP
	?	NC_002947	1265531 =	37 (0.850)					intergenic (‑106/+21)	PP_1106/quiP	hypothetical protein/acyl‑homoserine lactone acylase QuiP
*	?	NC_002947	= 1285032	47 (1.040)	4 (0.090)	4/234	NT	8.9%	coding (257/795 nt)	PP_1122	OmpA family protein
	?	NC_002947	= 1285055	38 (0.890)					coding (280/795 nt)	PP_1122	OmpA family protein
*	?	NC_002947	1298272 =	NA (NA)	5 (0.110)	5/240	NT	NA	intergenic (+125/+304)	PP_1133/PP_1134	transposase/hypothetical protein
	?	NC_002947	1298318 =	NA (NA)					intergenic (+171/+258)	PP_1133/PP_1134	transposase/hypothetical protein
*	?	NC_002947	1315819 =	49 (1.090)	3 (0.070)	3/236	NT	7.0%	coding (248/330 nt)	PP_1147	hypothetical protein
	?	NC_002947	1315855 =	33 (0.770)					coding (284/330 nt)	PP_1147	hypothetical protein
*	?	NC_002947	1330943 =	NA (NA)	3 (0.070)	3/238	NT	NA	coding (162/1644 nt)	PP_1157	acetolactate synthase
	?	NC_002947	1330987 =	NA (NA)					coding (206/1644 nt)	PP_1157	acetolactate synthase
*	?	NC_002947	= 1335055	47 (1.040)	4 (0.090)	4/242	NT	9.0%	coding (224/990 nt)	PP_1160	asparaginase family protein
	?	NC_002947	= 1335089	35 (0.790)					coding (258/990 nt)	PP_1160	asparaginase family protein
*	?	NC_002947	= 1370042	29 (0.640)	2 (0.050)	3/238	NT	6.5%	coding (832/1719 nt)	PP_1195	hypothetical protein
	?	NC_002947	= 1370064	30 (0.690)					coding (854/1719 nt)	PP_1195	hypothetical protein
*	?	NC_002947	= 1380504	42 (0.930)	8 (0.200)	8/224	NT	16.3%	intergenic (‑224/+38)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
	?	NC_002947	= 1380519	44 (1.080)					intergenic (‑239/+23)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
*	?	NC_002947	= 1398016	33 (0.730)	3 (0.070)	3/238	NT	8.3%	coding (958/1119 nt)	tolA	colicin S4/filamentous phage transport protein
	?	NC_002947	= 1398047	35 (0.810)					coding (989/1119 nt)	tolA	colicin S4/filamentous phage transport protein
*	?	NC_002947	= 1409082	37 (0.820)	12 (0.270)	9/240	NT	25.1%	intergenic (+20/‑255)	PP_1230/nadA	hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit
	?	NC_002947	= 1409146	36 (0.820)					intergenic (+84/‑191)	PP_1230/nadA	hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit
*	?	NC_002947	1419553 =	12 (0.270)	6 (0.180)	5/184	NT	41.5%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	8 (0.240)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	11 (0.240)	4 (0.120)	4/184	NT	33.1%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	8 (0.240)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1421050	40 (0.890)	4 (0.090)	4/234	NT	10.2%	coding (523/891 nt)	PP_1245	hypothetical protein
	?	NC_002947	= 1421063	33 (0.780)					coding (536/891 nt)	PP_1245	hypothetical protein
*	?	NC_002947	= 1426815	NA (NA)	7 (0.160)	5/246	NT	NA	coding (706/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1426858	NA (NA)					coding (749/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	1436018 =	45 (1.000)	6 (0.140)	5/236	NT	11.0%	intergenic (‑48/+105)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	1436109 =	54 (1.260)					intergenic (‑139/+14)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	= 1440131	1 (0.020)	8 (0.290) +48 bp	7/152	NT	51.1%	intergenic (‑455/‑204)	yveA/PP_1260	aspartate‑proton symporter/transposase
	?	NC_002947	5545674 =	24 (0.530)					intergenic (‑766/+111)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	1443111 =	50 (1.110)	10 (0.280)	7/198	NT	23.6%	intergenic (‑42/+134)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
	?	NC_002947	1443179 =	25 (0.690)					intergenic (‑110/+66)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
*	?	NC_002947	1460806 =	58 (1.290)	6 (0.140)	6/238	NT	9.0%	coding (666/1167 nt)	algJ	alginate O‑acetylase AlgJ
	?	NC_002947	1460877 =	66 (1.520)					coding (595/1167 nt)	algJ	alginate O‑acetylase AlgJ
*	?	NC_002947	1473183 =	55 (1.220)	4 (0.090)	3/236	NT	7.1%	coding (1045/1317 nt)	algD	GDP‑mannose 6‑dehydrogenase
	?	NC_002947	1473227 =	52 (1.210)					coding (1001/1317 nt)	algD	GDP‑mannose 6‑dehydrogenase
*	?	NC_002947	1487013 =	44 (0.980)	8 (0.230)	7/188	NT	28.4%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	7 (0.200)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1499465	25 (0.550)	4 (0.110)	4/202	NT	15.0%	intergenic (+35/‑131)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499502	25 (0.680)					intergenic (+72/‑94)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1522029 =	48 (1.060)	4 (0.090)	4/240	NT	7.7%	coding (1244/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
	?	NC_002947	1522072 =	50 (1.140)					coding (1287/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
*	?	NC_002947	1531788 =	54 (1.200)	6 (0.160)	6/200	NT	16.8%	coding (130/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	1531884 =	16 (0.440)					coding (34/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	1558189 =	38 (0.840)	4 (0.090)	4/238	NT	9.4%	coding (26/993 nt)	PP_1368	glycosyltransferase domain‑containing protein
	?	NC_002947	1558211 =	41 (0.950)					coding (4/993 nt) coding (732/732 nt)	PP_1368 PP_1369	glycosyltransferase domain‑containing protein hypothetical protein
*	?	NC_002947	1580097 =	35 (0.780)	4 (0.090)	4/232	NT	10.7%	coding (1342/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	1580126 =	34 (0.810)					coding (1313/3153 nt)	ttgB	efflux pump membrane protein TtgB
*	?	NC_002947	1584371 =	58 (1.290)	6 (0.140)	6/242	NT	9.8%	coding (685/1452 nt)	PP_1388	EmrB/QacA family drug resistance transporter
	?	NC_002947	1584400 =	54 (1.230)					coding (656/1452 nt)	PP_1388	EmrB/QacA family drug resistance transporter
*	?	NC_002947	1622692 =	69 (1.530)	6 (0.140)	6/234	NT	9.4%	coding (707/813 nt)	PP_1422	hypothetical protein
	?	NC_002947	1622719 =	51 (1.200)					coding (680/813 nt)	PP_1422	hypothetical protein
*	?	NC_002947	1666011 =	36 (0.800)	3 (0.070)	3/238	NT	8.4%	coding (760/852 nt)	PP_1460	membrane protein
	?	NC_002947	1666047 =	31 (0.720)					coding (724/852 nt)	PP_1460	membrane protein
*	?	NC_002947	1711779 =	43 (0.950)	3 (0.070)	3/238	NT	7.2%	coding (2356/2628 nt)	ppc	phosphoenolpyruvate carboxylase
	?	NC_002947	1711821 =	36 (0.830)					coding (2398/2628 nt)	ppc	phosphoenolpyruvate carboxylase
*	?	NC_002947	1731205 =	23 (0.510)	3 (0.090)	3/192	NT	12.0%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	26 (0.740)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1731232	23 (0.510)	6 (0.170)	5/192	NT	21.5%	intergenic (‑103/+88)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1731268	26 (0.740)					intergenic (‑139/+52)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	1747734 =	65 (1.440)	4 (0.090)	4/236	NT	6.5%	intergenic (‑184/+347)	PP_5473/PP_5474	LuxR family transcriptional regulator/hypothetical protein
	?	NC_002947	1747807 =	53 (1.230)					intergenic (‑257/+274)	PP_5473/PP_5474	LuxR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 1765970	41 (0.910)	7 (0.170)	6/228	NT	15.1%	intergenic (+13/‑34)	PP_1576/PP_1577	immunity protein/lambda family tail tape meausure protein
	?	NC_002947	= 1765975	41 (0.990)					intergenic (+18/‑29)	PP_1576/PP_1577	immunity protein/lambda family tail tape meausure protein
*	?	NC_002947	1801199 =	41 (0.910)	4 (0.090)	4/238	NT	9.8%	coding (1141/3525 nt)	dnaEA	DNA polymerase III subunit alpha
	?	NC_002947	1801232 =	34 (0.790)					coding (1174/3525 nt)	dnaEA	DNA polymerase III subunit alpha
*	?	NC_002947	1809090 =	64 (1.420)	4 (0.090)	3/232	NT	6.1%	coding (99/1290 nt)	eno	enolase
	?	NC_002947	1809139 =	64 (1.520)					coding (148/1290 nt)	eno	enolase
*	?	NC_002947	1838113 =	41 (0.910)	6 (0.140)	5/228	NT	13.2%	intergenic (+18/+86)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	1838195 =	41 (0.990)					intergenic (+100/+4)	PP_1642/PP_1643	hypothetical protein/membrane protein
*	?	NC_002947	= 1885242	49 (1.090)	7 (0.160) +CACGGC	4/236	NT	10.5%	intergenic (+163/‑134)	PP_1692/rmuC	hypothetical protein/DNA recombination limiting inversions protein
	?	NC_002947	5756478 =	76 (1.680)					intergenic (+99/‑589)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
*	?	NC_002947	1895878 =	63 (1.400)	5 (0.120)	5/236	NT	8.0%	coding (1070/1986 nt)	PP_1700	acyltransferase
	?	NC_002947	1895910 =	55 (1.280)					coding (1102/1986 nt)	PP_1700	acyltransferase
*	?	NC_002947	1899249 =	57 (1.260)	12 (0.290)	10/228	NT	18.7%	intergenic (+277/‑243)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899331 =	52 (1.250)					intergenic (+359/‑161)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	= 1906749	36 (0.800)	4 (0.110)	4/196	NT	11.4%	intergenic (+47/+81)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	= 1906791	34 (0.950)					intergenic (+89/+39)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	1936143 =	40 (0.890)	3 (0.070)	3/240	NT	7.4%	coding (402/1149 nt)	PP_1736	hypothetical protein
	?	NC_002947	1936177 =	36 (0.820)					coding (436/1149 nt)	PP_1736	hypothetical protein
*	?	NC_002947	1965064 =	58 (1.290)	4 (0.090)	4/238	NT	7.3%	coding (1233/2526 nt)	yegE	phosphodiesterase domain‑containing diguanylate cyclase
	?	NC_002947	1965122 =	46 (1.060)					coding (1291/2526 nt)	yegE	phosphodiesterase domain‑containing diguanylate cyclase
*	?	NC_002947	= 1967220	13 (0.290)	6 (0.180)	5/182	NT	31.1%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	17 (0.510)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1968086	45 (1.000)	6 (0.150)	6/222	NT	12.2%	intergenic (‑54/+104)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
	?	NC_002947	= 1968145	46 (1.140)					intergenic (‑113/+45)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
*	?	NC_002947	= 1976254	63 (1.400)	5 (0.120)	5/222	NT	8.0%	intergenic (+39/‑126)	pheA/PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
	?	NC_002947	= 1976306	59 (1.460)					intergenic (+91/‑74)	pheA/PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
*	?	NC_002947	2038740 =	49 (1.090)	3 (0.070)	3/234	NT	6.2%	coding (783/1143 nt)	rffE	UDP‑N‑acetylglucosamine‑2‑epimerase
	?	NC_002947	2038777 =	45 (1.060)					coding (746/1143 nt)	rffE	UDP‑N‑acetylglucosamine‑2‑epimerase
*	?	NC_002947	2048837 =	25 (0.550)	4 (0.100)	4/214	NT	11.8%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048928 =	38 (0.980)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	= 2048853	25 (0.550)	4 (0.100)	4/214	NT	11.8%	intergenic (+49/+90)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	= 2048910	38 (0.980)					intergenic (+106/+33)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	2049046 =	47 (1.040)	3 (0.070)	3/236	NT	6.0%	coding (269/372 nt)	PP_1822	hypothetical protein
	?	NC_002947	2049089 =	49 (1.140)					coding (226/372 nt)	PP_1822	hypothetical protein
*	?	NC_002947	= 2056021	48 (1.060)	6 (0.150)	5/216	NT	10.8%	intergenic (+27/‑116)	aroC/PP_1831	chorismate synthase/membrane protein
	?	NC_002947	= 2056095	57 (1.450)					intergenic (+101/‑42)	aroC/PP_1831	chorismate synthase/membrane protein
*	?	NC_002947	2063203 =	40 (0.890)	6 (0.170)	5/198	NT	18.5%	intergenic (+17/‑190)	PP_1838/PP_1839	membrane protein/hypothetical protein
	?	NC_002947	2063297 =	21 (0.580)					intergenic (+111/‑96)	PP_1838/PP_1839	membrane protein/hypothetical protein
*	?	NC_002947	= 2063975	50 (1.110)	6 (0.140)	5/238	NT	11.0%	coding (169/333 nt)	PP_1840	hypothetical protein
	?	NC_002947	= 2063996	49 (1.130)					coding (190/333 nt)	PP_1840	hypothetical protein
*	?	NC_002947	2076413 =	39 (0.860)	4 (0.100)	4/228	NT	10.0%	intergenic (+7/+39)	PP_5479/PP_1852	LysR family transcriptional regulator/enoyl‑ACP reductase
	?	NC_002947	2076442 =	36 (0.870)					intergenic (+36/+10)	PP_5479/PP_1852	LysR family transcriptional regulator/enoyl‑ACP reductase
*	?	NC_002947	= 2078299	16 (0.350)	7 (0.180)	5/214	NT	25.1%	intergenic (+41/+74)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 2078346	28 (0.720)					intergenic (+88/+27)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	2100003 =	32 (0.710)	6 (0.160)	6/202	NT	17.4%	intergenic (‑71/‑134)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2100098 =	31 (0.840)					intergenic (‑166/‑39)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2114144	37 (0.820)	4 (0.090)	4/234	NT	10.8%	coding (185/4899 nt)	PP_1882	membrane protein
	?	NC_002947	= 2114160	31 (0.730)					coding (169/4899 nt)	PP_1882	membrane protein
*	?	NC_002947	= 2115099	44 (0.980)	3 (0.070)	3/230	NT	6.2%	coding (576/1806 nt)	PP_1883	hypothetical protein
	?	NC_002947	= 2115121	50 (1.190)					coding (598/1806 nt)	PP_1883	hypothetical protein
*	?	NC_002947	= 2131568	51 (1.130)	5 (0.120)	5/236	NT	9.6%	coding (674/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	= 2131577	46 (1.070)					coding (665/2496 nt)	fimD	type I pili subunit FimD
*	?	NC_002947	= 2147270	27 (0.600)	4 (0.100) +TTGGTTTGCCTGACGGGCC	3/210	NT	11.5%	intergenic (+100/+17)	murB/rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
	?	NC_002947	= 5879216	46 (1.020)					intergenic (‑164/+19)	PP_5152/ycgM	hypothetical protein/isomerase/hydrolase
*	?	NC_002947	= 2273408	55 (1.220)	3 (0.070)	3/240	NT	5.3%	coding (1002/1041 nt)	PP_2004	AraC family transcriptional regulator
	?	NC_002947	= 2273450	55 (1.260)					coding (960/1041 nt)	PP_2004	AraC family transcriptional regulator
*	?	NC_002947	= 2291582	54 (1.200)	3 (0.070)	3/232	NT	6.6%	coding (890/960 nt)	PP_2018	BNR domain‑containing protein
	?	NC_002947	= 2291651	34 (0.810)					coding (959/960 nt) coding (3/2400 nt)	PP_2018 PP_2019	BNR domain‑containing protein RND family multidrug transporter
*	?	NC_002947	2295818 =	43 (0.950)	5 (0.140)	5/200	NT	12.7%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	34 (0.930)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2303174	35 (0.780)	3 (0.070)	3/224	NT	8.9%	intergenic (‑216/+79)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
	?	NC_002947	= 2303208	30 (0.740)					intergenic (‑250/+45)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
*	?	NC_002947	= 2303474	45 (1.000)	5 (0.120)	4/234	NT	10.2%	coding (1411/1632 nt)	PP_2027	hypothetical protein
	?	NC_002947	= 2303493	46 (1.080)					coding (1392/1632 nt)	PP_2027	hypothetical protein
*	?	NC_002947	2310567 =	50 (1.110)	3 (0.070)	3/228	NT	6.3%	coding (275/1311 nt)	PP_2033	hypothetical protein
	?	NC_002947	2310624 =	43 (1.040)					coding (332/1311 nt)	PP_2033	hypothetical protein
*	?	NC_002947	= 2314066	41 (0.910)	3 (0.070)	3/240	NT	7.3%	coding (65/1215 nt)	benE‑I	benzoate transport protein
	?	NC_002947	= 2314102	37 (0.850)					coding (29/1215 nt)	benE‑I	benzoate transport protein
*	?	NC_002947	= 2342921	46 (1.020)	6 (0.140)	6/238	NT	12.1%	coding (730/1254 nt)	PP_2058	porin
	?	NC_002947	= 2342940	43 (0.990)					coding (749/1254 nt)	PP_2058	porin
*	?	NC_002947	2379610 =	41 (0.910)	5 (0.110)	5/242	NT	11.0%	intergenic (+22/‑68)	cmpX/PP_2088	protein CmpX/RNA polymerase sigma factor SigX
	?	NC_002947	2379652 =	41 (0.930)					intergenic (+64/‑26)	cmpX/PP_2088	protein CmpX/RNA polymerase sigma factor SigX
*	?	NC_002947	2407988 =	43 (0.950)	4 (0.090)	4/240	NT	9.3%	coding (620/1566 nt)	PP_2111	aerotaxis receptor
	?	NC_002947	2408046 =	36 (0.820)					coding (562/1566 nt)	PP_2111	aerotaxis receptor
*	?	NC_002947	2456877 =	41 (0.910)	8 (0.220)	8/196	NT	22.4%	intergenic (+85/‑96)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
	?	NC_002947	2456941 =	23 (0.640)					intergenic (+149/‑32)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
*	?	NC_002947	= 2473723	43 (0.950)	3 (0.070)	3/238	NT	6.6%	coding (416/1851 nt)	PP_2167	PhoD‑like phosphatase
	?	NC_002947	= 2473768	44 (1.020)					coding (371/1851 nt)	PP_2167	PhoD‑like phosphatase
*	?	NC_002947	2546995 =	35 (0.780)	4 (0.090)	4/238	NT	10.3%	coding (171/282 nt)	PP_5504	hypothetical protein
	?	NC_002947	2547022 =	36 (0.830)					coding (144/282 nt)	PP_5504	hypothetical protein
*	?	NC_002947	2635890 =	38 (0.840)	6 (0.140)	6/242	NT	14.4%	coding (727/1047 nt)	PP_2305	hypothetical protein
	?	NC_002947	2635921 =	34 (0.770)					coding (696/1047 nt)	PP_2305	hypothetical protein
*	?	NC_002947	2748518 =	27 (0.600)	5 (0.110)	5/244	NT	15.7%	coding (31/741 nt)	PP_2403	chemotaxis protein CheY
	?	NC_002947	2748541 =	27 (0.610)					coding (8/741 nt)	PP_2403	chemotaxis protein CheY
*	?	NC_002947	= 2773568	40 (0.890)	3 (0.070)	3/226	NT	7.0%	coding (529/1053 nt)	calA	coniferyl alcohol dehydrogenase
	?	NC_002947	= 2773594	43 (1.050)					coding (555/1053 nt)	calA	coniferyl alcohol dehydrogenase
*	?	NC_002947	= 2777246	35 (0.780)	3 (0.070)	3/236	NT	7.6%	coding (302/585 nt)	PP_2429	membrane protein
	?	NC_002947	= 2777267	40 (0.930)					coding (281/585 nt)	PP_2429	membrane protein
*	?	NC_002947	2784719 =	45 (1.000)	3 (0.070)	3/240	NT	6.3%	coding (1129/1245 nt)	PP_2437	acyl‑CoA dehydrogenase
	?	NC_002947	2784745 =	45 (1.030)					coding (1155/1245 nt)	PP_2437	acyl‑CoA dehydrogenase
*	?	NC_002947	2808136 =	48 (1.060)	3 (0.070)	3/238	NT	5.9%	coding (94/375 nt)	PP_2462	hypothetical protein
	?	NC_002947	2808160 =	49 (1.130)					coding (118/375 nt)	PP_2462	hypothetical protein
*	?	NC_002947	2855879 =	37 (0.820)	3 (0.070)	3/240	NT	6.7%	noncoding (79/87 nt)	PP_mr36	C4 ncRNA
	?	NC_002947	2855956 =	48 (1.100)					noncoding (2/87 nt)	PP_mr36	C4 ncRNA
*	?	NC_002947	= 2908576	30 (0.660)	3 (0.070)	3/238	NT	9.0%	coding (162/1341 nt)	hasE	secretion metalloprotease
	?	NC_002947	= 2908596	32 (0.740)					coding (142/1341 nt)	hasE	secretion metalloprotease
*	?	NC_002947	2943021 =	38 (0.840)	5 (0.120)	5/238	NT	10.9%	intergenic (‑779/‑594)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B
	?	NC_002947	2943057 =	45 (1.040)					intergenic (‑815/‑558)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B
*	?	NC_002947	2957115 =	41 (0.910)	8 (0.200)	7/218	NT	19.5%	intergenic (+27/‑169)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2957202 =	30 (0.760)					intergenic (+114/‑82)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	= 2981197	36 (0.800)	5 (0.120)	5/228	NT	11.9%	coding (1211/1734 nt)	PP_2607	hypothetical protein
	?	NC_002947	= 2981208	41 (0.990)					coding (1200/1734 nt)	PP_2607	hypothetical protein
*	?	NC_002947	= 3143903	40 (0.890)	3 (0.070)	3/238	NT	7.4%	coding (784/1539 nt)	rbsA‑II	ribose ABC transporter ‑ ATP‑binding subunit
	?	NC_002947	= 3143917	37 (0.850)					coding (798/1539 nt)	rbsA‑II	ribose ABC transporter ‑ ATP‑binding subunit
*	?	NC_002947	3248965 =	42 (0.930)	4 (0.090)	4/238	NT	9.4%	coding (542/1704 nt)	ureC	urease subunit alpha
	?	NC_002947	3249080 =	37 (0.850)					coding (657/1704 nt)	ureC	urease subunit alpha
*	?	NC_002947	3254059 =	49 (1.090)	3 (0.070)	3/240	NT	5.9%	coding (1722/2202 nt)	PP_2852	sulfatase domain‑containing protein
	?	NC_002947	3254088 =	48 (1.100)					coding (1693/2202 nt)	PP_2852	sulfatase domain‑containing protein
*	?	NC_002947	= 3332998	42 (0.930)	3 (0.070)	3/234	NT	6.8%	coding (150/918 nt)	PP_2930	L‑serine dehydratase
	?	NC_002947	= 3333016	42 (0.990)					coding (132/918 nt)	PP_2930	L‑serine dehydratase
*	?	NC_002947	= 3336220	26 (0.580)	3 (0.070)	3/232	NT	11.5%	coding (419/843 nt)	yghU	GSH‑dependent disulfide bond oxidoreductase
	?	NC_002947	= 3336246	22 (0.520)					coding (393/843 nt)	yghU	GSH‑dependent disulfide bond oxidoreductase
*	?	NC_002947	3435481 =	37 (0.820)	3 (0.070)	3/234	NT	8.5%	coding (350/981 nt)	gpJ	baseplate/tail fiber protein
	?	NC_002947	3435521 =	30 (0.700)					coding (390/981 nt)	gpJ	baseplate/tail fiber protein
*	?	NC_002947	3455021 =	43 (0.950)	6 (0.140)	6/236	NT	13.8%	coding (913/1953 nt)	aacs	acetoacetyl‑CoA synthetase
	?	NC_002947	3455047 =	34 (0.790)					coding (887/1953 nt)	aacs	acetoacetyl‑CoA synthetase
*	?	NC_002947	= 3465854	52 (1.150)	6 (0.140)	6/240	NT	10.8%	intergenic (‑17/+230)	aroF‑II/PP_mr39	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase/P15 ncRNA
	?	NC_002947	= 3465882	49 (1.120)					intergenic (‑45/+202)	aroF‑II/PP_mr39	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase/P15 ncRNA
*	?	NC_002947	= 3479309	22 (0.490)	4 (0.090)	4/236	NT	15.4%	coding (1953/2496 nt)	PP_3090	OmpA domain‑containing protein
	?	NC_002947	= 3479353	23 (0.540)					coding (1909/2496 nt)	PP_3090	OmpA domain‑containing protein
*	?	NC_002947	3501498 =	31 (0.690)	14 (0.330)	14/236	NT	29.0%	coding (189/192 nt)	PP_5567	hypothetical protein
	?	NC_002947	5061301 =	39 (0.910)					intergenic (‑420/‑71)	PP_4458/PP_4459	opine ABC transporter substrate‑binding protein/transposase
*	?	NC_002947	= 3501501	29 (0.640)	22 (0.500)	22/240	NT	36.6%	coding (192/192 nt)	PP_5567	hypothetical protein
	?	NC_002947	= 5062465	48 (1.100)					coding (1094/1098 nt)	PP_4459	transposase
*	?	NC_002947	= 3525786	42 (0.930)	4 (0.090)	4/234	NT	9.2%	coding (189/609 nt)	lexA‑II	transcriptional repressor
	?	NC_002947	= 3525795	39 (0.920)					coding (198/609 nt)	lexA‑II	transcriptional repressor
*	?	NC_002947	= 3546886	37 (0.820)	4 (0.090)	4/240	NT	10.6%	coding (118/1527 nt)	PP_3131	membrane protein
	?	NC_002947	= 3546913	32 (0.730)					coding (91/1527 nt)	PP_3131	membrane protein
*	?	NC_002947	= 3588138	43 (0.950)	5 (0.120)	4/238	NT	11.7%	intergenic (+16/‑59)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	= 3588208	34 (0.790)					coding (12/1272 nt)	benE‑II	benzoate transport protein
*	?	NC_002947	= 3598659	25 (0.550)	4 (0.090)	4/242	NT	12.0%	coding (1089/1521 nt)	PP_3175	ferredoxin reductase dioxygenase subunit
	?	NC_002947	= 3598684	34 (0.770)					coding (1064/1521 nt)	PP_3175	ferredoxin reductase dioxygenase subunit
*	?	NC_002947	3808111 =	NA (NA)	6 (0.130)	5/246	NT	NA	coding (1631/1644 nt)	PP_3365	acetolactate synthase
	?	NC_002947	3808128 =	NA (NA)					coding (1614/1644 nt)	PP_3365	acetolactate synthase
*	?	NC_002947	3810697 =	59 (1.310)	3 (0.070)	3/230	NT	5.8%	coding (771/882 nt)	PP_3366	LysR family transcriptional regulator
	?	NC_002947	3810732 =	43 (1.030)					coding (806/882 nt)	PP_3366	LysR family transcriptional regulator
*	?	NC_002947	3850591 =	48 (1.060)	5 (0.120)	5/230	NT	10.4%	coding (29/474 nt)	PP_3398	curli fiber surface‑exposed nucleator CsgB
	?	NC_002947	3850613 =	42 (1.000)					coding (51/474 nt)	PP_3398	curli fiber surface‑exposed nucleator CsgB
*	?	NC_002947	= 3903097	40 (0.890)	4 (0.090)	4/240	NT	9.4%	intergenic (+18/+97)	PP_3445/ilvA‑I	hypothetical protein/threonine deaminase
	?	NC_002947	= 3903142	38 (0.870)					intergenic (+63/+52)	PP_3445/ilvA‑I	hypothetical protein/threonine deaminase
*	?	NC_002947	3943709 =	43 (0.950)	4 (0.090)	4/240	NT	8.8%	coding (228/1866 nt)	PP_3478	secretion protein
	?	NC_002947	3943740 =	41 (0.940)					coding (197/1866 nt)	PP_3478	secretion protein
*	?	NC_002947	= 3945563	47 (1.040)	4 (0.090)	4/240	NT	8.0%	coding (780/810 nt)	PP_3482	hypothetical protein
	?	NC_002947	= 3945582	47 (1.080)					coding (761/810 nt)	PP_3482	hypothetical protein
*	?	NC_002947	3958449 =	52 (1.150)	3 (0.070)	3/236	NT	6.0%	coding (1980/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
	?	NC_002947	3958492 =	44 (1.020)					coding (1937/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
*	?	NC_002947	= 4017678	39 (0.860)	4 (0.090)	4/238	NT	9.4%	coding (69/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4017710	40 (0.920)					coding (101/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 4039105	47 (1.040)	3 (0.070)	3/242	NT	6.3%	intergenic (+11/‑83)	PP_3559/PP_3560	glycine betaine ABC transporter permease/LysR family transcriptional regulator
	?	NC_002947	= 4039142	44 (1.000)					intergenic (+48/‑46)	PP_3559/PP_3560	glycine betaine ABC transporter permease/LysR family transcriptional regulator
*	?	NC_002947	4064806 =	51 (1.130)	4 (0.090)	4/240	NT	8.0%	coding (1198/1491 nt)	PP_3582	RND transporter outer membrane protein
	?	NC_002947	4064841 =	43 (0.980)					coding (1163/1491 nt)	PP_3582	RND transporter outer membrane protein
*	?	NC_002947	= 4079481	29 (0.640)	5 (0.140)	5/200	NT	15.5%	intergenic (‑241/+143)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
	?	NC_002947	= 4079550	31 (0.850)					intergenic (‑310/+74)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
*	?	NC_002947	= 4114361	46 (1.020)	5 (0.120)	4/222	NT	9.8%	intergenic (+64/+82)	PP_3619/ycaO	hypothetical protein/ribosomal protein S12 methylthiotransferase accessory factor
	?	NC_002947	= 4114406	51 (1.260)					intergenic (+109/+37)	PP_3619/ycaO	hypothetical protein/ribosomal protein S12 methylthiotransferase accessory factor
*	?	NC_002947	4117476 =	47 (1.040)	5 (0.120)	4/236	NT	10.6%	coding (122/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta
	?	NC_002947	4117507 =	40 (0.930)					coding (153/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta
*	?	NC_002947	= 4119939	45 (1.000)	4 (0.100)	4/228	NT	8.6%	coding (311/1344 nt)	adhB	alcohol dehydrogenase cytochrome c subunit
	?	NC_002947	= 4119959	44 (1.060)					coding (331/1344 nt)	adhB	alcohol dehydrogenase cytochrome c subunit
*	?	NC_002947	= 4129658	43 (0.950)	5 (0.120)	4/234	NT	10.4%	coding (231/942 nt)	PP_3633	ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase
	?	NC_002947	= 4129681	46 (1.080)					coding (254/942 nt)	PP_3633	ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase
*	?	NC_002947	= 4131154	43 (0.950)	12 (0.290)	12/228	NT	23.2%	intergenic (+22/+90)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
	?	NC_002947	= 4131216	40 (0.960)					intergenic (+84/+28)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
*	?	NC_002947	= 4140190	54 (1.200)	6 (0.140)	6/232	NT	10.4%	intergenic (+38/‑227)	PP_3644/PP_5609	monooxygenase subunit/hypothetical protein
	?	NC_002947	= 4140213	53 (1.260)					intergenic (+61/‑204)	PP_3644/PP_5609	monooxygenase subunit/hypothetical protein
*	?	NC_002947	= 4150058	51 (1.130)	8 (0.180)	7/244	NT	13.8%	intergenic (+13/‑384)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
	?	NC_002947	= 4150143	50 (1.130)					intergenic (+98/‑299)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
*	?	NC_002947	= 4159142	42 (0.930)	4 (0.100)	3/216	NT	9.0%	intergenic (+46/‑163)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	= 4159170	44 (1.120)					intergenic (+74/‑135)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	= 4172981	48 (1.060)	3 (0.070)	3/242	NT	5.8%	coding (571/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase
	?	NC_002947	= 4173006	50 (1.140)					coding (596/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase
*	?	NC_002947	4207297 =	34 (0.750)	6 (0.140)	6/234	NT	15.2%	coding (523/6624 nt)	PP_3691	DNA helicase‑related protein
	?	NC_002947	4207320 =	35 (0.820)					coding (500/6624 nt)	PP_3691	DNA helicase‑related protein
*	?	NC_002947	4237571 =	29 (0.640)	2 (0.050)	4/234	NT	6.3%	coding (723/1122 nt)	catB	muconate cycloisomerase 1
	?	NC_002947	4237600 =	32 (0.750)					coding (694/1122 nt)	catB	muconate cycloisomerase 1
*	?	NC_002947	4284658 =	42 (0.930)	4 (0.090)	4/240	NT	8.8%	coding (19/849 nt)	hbd	3‑hydroxybutyryl‑CoA dehydrogenase
	?	NC_002947	4284718 =	42 (0.960)					coding (79/849 nt)	hbd	3‑hydroxybutyryl‑CoA dehydrogenase
*	?	NC_002947	= 4335068	34 (0.750)	3 (0.070)	3/236	NT	8.4%	coding (527/720 nt)	PP_3807	thioesterase
	?	NC_002947	= 4335096	33 (0.770)					coding (499/720 nt)	PP_3807	thioesterase
*	?	NC_002947	4336935 =	60 (1.330)	3 (0.070)	3/232	NT	5.2%	coding (324/885 nt)	PP_3811	LysR family transcriptional regulator
	?	NC_002947	4337001 =	53 (1.260)					coding (258/885 nt)	PP_3811	LysR family transcriptional regulator
*	?	NC_002947	4340085 =	19 (0.420)	8 (0.240)	6/180	NT	47.4%	intergenic (+26/‑305)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
	?	NC_002947	4340169 =	4 (0.120)					intergenic (+110/‑221)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
*	?	NC_002947	= 4354950	39 (0.860)	4 (0.090)	4/242	NT	8.9%	coding (106/681 nt)	modB	molybdate ABC transporter permease ModB
	?	NC_002947	= 4354978	44 (1.000)					coding (134/681 nt)	modB	molybdate ABC transporter permease ModB
*	?	NC_002947	4363036 =	28 (0.620)	4 (0.090)	4/242	NT	12.6%	coding (78/1011 nt)	adhP	alcohol dehydrogenase
	?	NC_002947	4363059 =	28 (0.640)					coding (101/1011 nt)	adhP	alcohol dehydrogenase
*	?	NC_002947	4397217 =	46 (1.020)	4 (0.090)	4/232	NT	9.6%	coding (67/552 nt)	PP_3875	hypothetical protein
	?	NC_002947	4397307 =	32 (0.760)					coding (306/327 nt)	PP_3876	hypothetical protein
*	?	NC_002947	= 4408241	42 (0.930)	5 (0.120)	5/238	NT	10.1%	coding (87/444 nt)	PP_3890	hypothetical protein
	?	NC_002947	= 4408301	49 (1.130)					coding (27/444 nt)	PP_3890	hypothetical protein
*	?	NC_002947	4419732 =	38 (0.840)	3 (0.070)	3/232	NT	9.3%	coding (455/552 nt)	PP_3910	hypothetical protein
	?	NC_002947	4419828 =	23 (0.540)					coding (551/552 nt)	PP_3910	hypothetical protein
*	?	NC_002947	= 4443120	45 (1.000)	4 (0.090)	4/238	NT	8.6%	coding (906/1314 nt)	nicT	metabolite transport protein NicT
	?	NC_002947	= 4443151	42 (0.970)					coding (875/1314 nt)	nicT	metabolite transport protein NicT
*	?	NC_002947	4459082 =	53 (1.170)	4 (0.100)	4/230	NT	7.8%	coding (63/1455 nt)	trkH‑I	potassium transporter
	?	NC_002947	4459110 =	46 (1.100)					coding (91/1455 nt)	trkH‑I	potassium transporter
*	?	NC_002947	= 4466688	55 (1.220)	8 (0.180)	8/246	NT	13.1%	coding (387/1362 nt)	nhaA‑II	Na(+)/H(+) antiporter NhaA
	?	NC_002947	= 4466713	52 (1.160)					coding (412/1362 nt)	nhaA‑II	Na(+)/H(+) antiporter NhaA
*	?	NC_002947	= 4545916	33 (0.730)	4 (0.090)	4/232	NT	10.7%	coding (1474/1491 nt)	pydP	NCS1 family transporter PydP
	?	NC_002947	= 4545938	36 (0.850)					coding (1452/1491 nt)	pydP	NCS1 family transporter PydP
*	?	NC_002947	4551231 =	43 (0.950)	3 (0.070)	3/234	NT	6.7%	coding (556/1275 nt)	pydA	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
	?	NC_002947	4551263 =	43 (1.010)					coding (588/1275 nt)	pydA	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
*	?	NC_002947	4586063 =	11 (0.240)	9 (0.290)	10/172	NT	65.1%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586167 =	2 (0.060)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4586100	11 (0.240)	10 (0.320)	8/172	NT	67.5%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4586128	2 (0.060)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	4587310 =	58 (1.290)	4 (0.090)	4/234	NT	7.2%	coding (551/1683 nt)	PP_4063	long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4587343 =	48 (1.130)					coding (518/1683 nt)	PP_4063	long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	4593801 =	74 (1.640)	4 (0.110)	4/202	NT	6.6%	intergenic (+61/+238)	mccA/PP_4068	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha/Cro/CI family transcriptional regulator
	?	NC_002947	4593905 =	53 (1.440)					intergenic (+165/+134)	mccA/PP_4068	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha/Cro/CI family transcriptional regulator
*	?	NC_002947	4604457 =	31 (0.690)	6 (0.140)	6/232	NT	16.4%	coding (241/411 nt)	PP_4076	hypothetical protein
	?	NC_002947	4604496 =	32 (0.760)					coding (280/411 nt)	PP_4076	hypothetical protein
*	?	NC_002947	4635686 =	38 (0.840)	3 (0.070)	3/236	NT	8.0%	coding (116/639 nt)	uvrY	BarA/UvrY two‑componenent system response regulator
	?	NC_002947	4635739 =	33 (0.770)					coding (63/639 nt)	uvrY	BarA/UvrY two‑componenent system response regulator
*	?	NC_002947	4647603 =	6 (0.130)	3 (0.100)	3/170	NT	49.5%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	2 (0.060)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4647641	4 (0.090)	5 (0.160)	5/170	NT	67.8%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647671	2 (0.060)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	4700790 =	52 (1.150)	6 (0.150)	6/220	NT	12.4%	intergenic (‑57/+93)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	4700862 =	39 (0.970)					intergenic (‑129/+21)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	4755172 =	69 (1.530)	4 (0.100)	3/230	NT	6.4%	coding (368/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	4755215 =	53 (1.270)					coding (411/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	= 4794368	37 (0.820)	3 (0.070)	3/238	NT	7.2%	coding (656/984 nt)	PP_4222	protein SyrP
	?	NC_002947	= 4794392	42 (0.970)					coding (632/984 nt)	PP_4222	protein SyrP
*	?	NC_002947	4808219 =	0 (0.000)	17 (0.520)	15/178	NT	56.7%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988991	26 (0.800)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4809277	58 (1.290)	8 (0.180)	6/240	NT	12.9%	coding (787/1716 nt)	dsbD‑II	thiol/disulfide interchange protein 2
	?	NC_002947	= 4809300	52 (1.190)					coding (810/1716 nt)	dsbD‑II	thiol/disulfide interchange protein 2
*	?	NC_002947	4817931 =	30 (0.660)	5 (0.110)	5/246	NT	14.5%	coding (582/795 nt)	PP_4242	conserved protein of unknown function with Rhs repeat‑associated core domain
	?	NC_002947	4817955 =	29 (0.650)					coding (606/795 nt)	PP_4242	conserved protein of unknown function with Rhs repeat‑associated core domain
*	?	NC_002947	4845110 =	60 (1.330)	4 (0.090)	4/232	NT	6.8%	coding (482/531 nt)	PP_4260	hypothetical protein
	?	NC_002947	4845141 =	53 (1.260)					coding (513/531 nt)	PP_4260	hypothetical protein
*	?	NC_002947	= 4852498	18 (0.400)	5 (0.170)	5/166	NT	33.3%	intergenic (‑124/+173)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
	?	NC_002947	= 4852557	8 (0.260)					intergenic (‑183/+114)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
*	?	NC_002947	4856141 =	39 (0.860)	4 (0.100)	4/220	NT	8.5%	intergenic (+68/+128)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	4856228 =	52 (1.300)					intergenic (+155/+41)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4856154	45 (1.000)	4 (0.100)	4/220	NT	8.0%	intergenic (+81/+115)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	= 4856213	52 (1.300)					intergenic (+140/+56)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4861197	55 (1.220)	12 (0.330)	9/198	NT	19.4%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	56 (1.550)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	= 4876412	56 (1.240)	3 (0.080) +TGCGGTGGTGGCGGCAAC	3/210	NT	5.2%	intergenic (+205/+232)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
	?	NC_002947	= 5389439	73 (1.630)					intergenic (+90/‑230)	dld2/PP_4738	D‑lactate dehydrogenase/hypothetical protein
*	?	NC_002947	4893598 =	44 (0.980)	6 (0.170)	6/194	NT	13.7%	intergenic (+28/‑180)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	4893677 =	41 (1.160)					intergenic (+107/‑101)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	= 4893624	45 (1.000)	5 (0.140)	4/194	NT	11.6%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4893649	41 (1.160)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	4896423 =	35 (0.780)	7 (0.190)	4/206	NT	19.2%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4896512 =	30 (0.800)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	4907446 =	50 (1.110)	8 (0.180)	8/246	NT	13.4%	coding (388/939 nt)	PP_4316	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	4907477 =	54 (1.210)					coding (357/939 nt)	PP_4316	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	= 4957617	51 (1.130)	5 (0.130)	3/218	NT	9.9%	intergenic (‑55/+108)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
	?	NC_002947	= 4957677	46 (1.160)					intergenic (‑115/+48)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
*	?	NC_002947	= 4957743	56 (1.240)	9 (0.210)	9/234	NT	14.5%	coding (1002/1020 nt)	fliG	flagellar motor switch protein
	?	NC_002947	= 4957750	53 (1.240)					coding (995/1020 nt)	fliG	flagellar motor switch protein
*	?	NC_002947	= 4959601	37 (0.820)	4 (0.090)	4/240	NT	10.4%	coding (915/1779 nt)	fliF	flagellar M‑ring protein
	?	NC_002947	= 4959615	33 (0.760)					coding (901/1779 nt)	fliF	flagellar M‑ring protein
*	?	NC_002947	4977437 =	43 (0.950)	4 (0.090)	4/238	NT	8.6%	coding (500/1110 nt)	flgI	flagellar P‑ring protein
	?	NC_002947	4977484 =	44 (1.020)					coding (453/1110 nt)	flgI	flagellar P‑ring protein
*	?	NC_002947	4983887 =	19 (0.420)	5 (0.120)	4/232	NT	23.9%	intergenic (‑289/+33)	flgB/cheR	flagellar basal‑body rod protein FlgB/chemotaxis protein methyltransferase
	?	NC_002947	4983915 =	14 (0.330)					intergenic (‑317/+5)	flgB/cheR	flagellar basal‑body rod protein FlgB/chemotaxis protein methyltransferase
*	?	NC_002947	4984361 =	44 (0.980)	3 (0.070)	3/242	NT	6.4%	coding (387/828 nt)	cheR	chemotaxis protein methyltransferase
	?	NC_002947	4984382 =	45 (1.020)					coding (366/828 nt)	cheR	chemotaxis protein methyltransferase
*	?	NC_002947	= 4990521	41 (0.910)	4 (0.090)	4/234	NT	8.6%	coding (659/1242 nt)	PP_4399	glutamine synthetase
	?	NC_002947	= 4990551	46 (1.080)					coding (629/1242 nt)	PP_4399	glutamine synthetase
*	?	NC_002947	5047123 =	46 (1.020)	4 (0.090)	4/246	NT	7.3%	intergenic (+56/+392)	PP_5683/PP_5684	hypothetical protein/hypothetical protein
	?	NC_002947	5047158 =	56 (1.250)					intergenic (+91/+357)	PP_5683/PP_5684	hypothetical protein/hypothetical protein
*	?	NC_002947	= 5051176	47 (1.040)	4 (0.090)	4/232	NT	8.9%	intergenic (‑68/+306)	PP_5687/PP_4452	MFS transporter/NAD/NADP octopine/nopaline dehydrogenase family protein
	?	NC_002947	= 5051184	38 (0.900)					intergenic (‑76/+298)	PP_5687/PP_4452	MFS transporter/NAD/NADP octopine/nopaline dehydrogenase family protein
*	?	NC_002947	5081638 =	46 (1.020)	6 (0.140)	6/232	NT	12.4%	intergenic (‑52/+51)	lysC/alaS	aspartokinase/alanine‑‑tRNA ligase
	?	NC_002947	5081683 =	42 (0.990)					intergenic (‑97/+6)	lysC/alaS	aspartokinase/alanine‑‑tRNA ligase
*	?	NC_002947	5105457 =	76 (1.680)	4 (0.090)	4/232	NT	5.8%	coding (2703/3021 nt)	ydiJ	putative oxidoreductase
	?	NC_002947	5105491 =	60 (1.420)					coding (2669/3021 nt)	ydiJ	putative oxidoreductase
*	?	NC_002947	5107938 =	57 (1.260)	5 (0.120)	4/236	NT	8.4%	coding (222/3021 nt)	ydiJ	putative oxidoreductase
	?	NC_002947	5107971 =	55 (1.280)					coding (189/3021 nt)	ydiJ	putative oxidoreductase
*	?	NC_002947	5145922 =	50 (1.110)	5 (0.120)	3/238	NT	10.2%	coding (880/1323 nt)	srmB	ATP‑dependent DEAD‑box RNA helicase
	?	NC_002947	5145955 =	40 (0.920)					coding (847/1323 nt)	srmB	ATP‑dependent DEAD‑box RNA helicase
*	?	NC_002947	5158987 =	47 (1.040)	3 (0.070)	3/238	NT	6.1%	coding (1035/1833 nt)	PP_4542	ABC transporter ATP‑binding protein/permease
	?	NC_002947	5159052 =	48 (1.110)					coding (1100/1833 nt)	PP_4542	ABC transporter ATP‑binding protein/permease
*	?	NC_002947	5175524 =	32 (0.710)	4 (0.090)	4/234	NT	10.0%	coding (279/945 nt)	PP_4551	alpha/beta family hydrolase
	?	NC_002947	5175583 =	42 (0.990)					coding (338/945 nt)	PP_4551	alpha/beta family hydrolase
*	?	NC_002947	= 5178251	59 (1.310)	7 (0.160)	6/240	NT	10.7%	coding (285/486 nt)	PP_4554	hypothetical protein
	?	NC_002947	= 5178264	60 (1.370)					coding (272/486 nt)	PP_4554	hypothetical protein
*	?	NC_002947	= 5201663	17 (0.380)	10 (0.320)	8/174	NT	39.3%	intergenic (‑101/‑79)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	= 5201684	19 (0.600)					intergenic (‑122/‑58)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	5210267 =	55 (1.220)	3 (0.080)	3/216	NT	5.9%	intergenic (‑85/+93)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	5210358 =	48 (1.220)					intergenic (‑176/+2)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	= 5255633	53 (1.170)	3 (0.070)	3/234	NT	5.8%	coding (115/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase
	?	NC_002947	= 5255654	47 (1.100)					coding (136/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase
*	?	NC_002947	5288442 =	33 (0.730)	6 (0.180)	6/188	NT	27.3%	intergenic (‑75/+109)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	5288536 =	7 (0.200)					intergenic (‑169/+15)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	5331243 =	51 (1.130)	3 (0.070)	3/226	NT	6.8%	coding (366/1173 nt)	PP_4692	aspartate/tyrosine/aromatic aminotransferase
	?	NC_002947	5331289 =	36 (0.880)					coding (320/1173 nt)	PP_4692	aspartate/tyrosine/aromatic aminotransferase
*	?	NC_002947	5333224 =	56 (1.240)	4 (0.090)	4/236	NT	7.1%	intergenic (+8/‑235)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
	?	NC_002947	5333322 =	51 (1.190)					intergenic (+106/‑137)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
*	?	NC_002947	5334493 =	59 (1.310)	4 (0.090)	4/232	NT	7.2%	coding (875/2976 nt)	PP_4695	two‑component system sensor histidine kinase
	?	NC_002947	5334532 =	48 (1.140)					coding (914/2976 nt)	PP_4695	two‑component system sensor histidine kinase
*	?	NC_002947	= 5346421	45 (1.000)	3 (0.070)	3/232	NT	6.4%	coding (1771/1935 nt)	acsA‑II	acetyl‑CoA synthetase
	?	NC_002947	= 5346454	46 (1.090)					coding (1804/1935 nt)	acsA‑II	acetyl‑CoA synthetase
*	?	NC_002947	5362599 =	42 (0.930)	4 (0.090)	4/232	NT	9.4%	coding (1215/1341 nt)	glmM	phosphoglucosamine mutase
	?	NC_002947	5362655 =	38 (0.900)					coding (1159/1341 nt)	glmM	phosphoglucosamine mutase
*	?	NC_002947	5377753 =	42 (0.930)	4 (0.090)	4/238	NT	9.5%	coding (519/558 nt)	grpE	heat shock protein GrpE
	?	NC_002947	5377792 =	36 (0.830)					coding (480/558 nt)	grpE	heat shock protein GrpE
*	?	NC_002947	= 5382480	15 (0.330)	6 (0.190)	5/178	NT	30.2%	intergenic (+52/+81)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	= 5382508	17 (0.520)					intergenic (+80/+53)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	5383200 =	41 (0.910)	3 (0.070)	3/240	NT	6.8%	coding (129/768 nt)	pdhR	DNA‑binding transcriptional regulator LldR
	?	NC_002947	5383230 =	43 (0.980)					coding (99/768 nt)	pdhR	DNA‑binding transcriptional regulator LldR
*	?	NC_002947	= 5389439	73 (1.630)	4 (0.100) +GTTGCCGCCGCCACCGTA	3/210	NT	7.2%	intergenic (+90/‑230)	dld2/PP_4738	D‑lactate dehydrogenase/hypothetical protein
	?	NC_002947	= 5460701	47 (1.040)					intergenic (+34/‑183)	holA/PP_4797	DNA polymerase III subunit delta/hypothetical protein
*	?	NC_002947	= 5424553	46 (1.020)	4 (0.100)	4/230	NT	8.3%	coding (104/915 nt)	PP_4764	histone deacetylase family protein
	?	NC_002947	= 5424567	46 (1.100)					coding (118/915 nt)	PP_4764	histone deacetylase family protein
*	?	NC_002947	= 5450922	40 (0.890)	4 (0.090)	4/234	NT	8.7%	coding (253/840 nt)	corC	Co(2+)/Mg(2+)efflux heat shock protein
	?	NC_002947	= 5450949	46 (1.080)					coding (280/840 nt)	corC	Co(2+)/Mg(2+)efflux heat shock protein
*	?	NC_002947	5455677 =	46 (1.020)	9 (0.220)	9/222	NT	18.0%	intergenic (‑37/+98)	PP_4792/PP_4793	hypothetical protein/hypothetical protein
	?	NC_002947	5455715 =	41 (1.010)					intergenic (‑75/+60)	PP_4792/PP_4793	hypothetical protein/hypothetical protein
*	?	NC_002947	5477138 =	4 (0.090)	16 (0.530)	10/166	NT	82.7%	intergenic (+3/+109)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	5477237 =	4 (0.130)					intergenic (+102/+10)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
*	?	NC_002947	= 5477178	2 (0.040)	9 (0.300)	7/166	NT	77.1%	intergenic (+43/+69)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	= 5477195	4 (0.130)					intergenic (+60/+52)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
*	?	NC_002947	= 5487827	52 (1.150)	4 (0.090)	4/234	NT	8.5%	coding (1108/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 5487884	37 (0.870)					coding (1165/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	5488624 =	59 (1.310)	4 (0.090)	4/240	NT	6.9%	coding (1905/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	5488652 =	51 (1.170)					coding (1933/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 5505179	33 (0.730)	7 (0.160)	7/236	NT	17.4%	intergenic (+14/‑43)	oprC/PP_4839	copper receptor OprC/iron‑regulated membrane protein
	?	NC_002947	= 5505187	35 (0.820)					intergenic (+22/‑35)	oprC/PP_4839	copper receptor OprC/iron‑regulated membrane protein
*	?	NC_002947	= 5508216	49 (1.090)	4 (0.090)	4/236	NT	7.7%	intergenic (+22/‑228)	cycA/urtA	D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein
	?	NC_002947	= 5508241	49 (1.140)					intergenic (+47/‑203)	cycA/urtA	D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein
*	?	NC_002947	= 5537105	62 (1.370)	11 (0.310)	5/194	NT	18.9%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	46 (1.300)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	= 5594170	28 (0.620)	4 (0.110)	4/192	NT	13.6%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5594207	29 (0.830)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5610694	64 (1.420)	5 (0.120)	9/232	NT	7.6%	coding (58/333 nt)	emrE	small multidrug resistance protein
	?	NC_002947	= 5610700	61 (1.440)					coding (64/333 nt)	emrE	small multidrug resistance protein
*	?	NC_002947	5621274 =	39 (0.860)	4 (0.090)	4/236	NT	9.9%	coding (41/774 nt)	PP_4939	hypothetical protein
	?	NC_002947	5621291 =	36 (0.840)					coding (24/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	5637532 =	48 (1.060)	7 (0.160)	6/244	NT	12.3%	coding (15/1443 nt)	PP_4949	TldD/PmbA family peptidase
	?	NC_002947	5637576 =	53 (1.190)					coding (59/1443 nt)	PP_4949	TldD/PmbA family peptidase
*	?	NC_002947	5643281 =	71 (1.570)	6 (0.140)	6/236	NT	10.5%	intergenic (+15/‑108)	dbpA/yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
	?	NC_002947	5643359 =	35 (0.820)					intergenic (+93/‑30)	dbpA/yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
*	?	NC_002947	5649651 =	56 (1.240)	5 (0.120)	5/238	NT	8.6%	coding (1593/2127 nt)	PP_4959	diguanylate cyclase
	?	NC_002947	5649679 =	53 (1.220)					coding (1565/2127 nt)	PP_4959	diguanylate cyclase
*	?	NC_002947	= 5669477	42 (0.930)	5 (0.120)	4/220	NT	10.3%	intergenic (+27/‑98)	ahcY/metF	adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase
	?	NC_002947	= 5669498	50 (1.250)					intergenic (+48/‑77)	ahcY/metF	adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase
*	?	NC_002947	5671666 =	20 (0.440)	8 (0.220)	8/200	NT	35.5%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671751 =	13 (0.360)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5671689	18 (0.400)	4 (0.110)	4/200	NT	22.5%	intergenic (+57/‑113)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	= 5671726	13 (0.360)					intergenic (+94/‑76)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	5689974 =	63 (1.400)	5 (0.120)	3/238	NT	7.8%	intergenic (‑25/+23)	pilH/pilG	twitching motility protein PilH/pilus biosynthesis/twitching motility protein PilG
	?	NC_002947	5689999 =	57 (1.320)					coding (400/402 nt)	pilG	pilus biosynthesis/twitching motility protein PilG
*	?	NC_002947	= 5692629	55 (1.220)	5 (0.120)	5/228	NT	8.7%	intergenic (+42/‑128)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
	?	NC_002947	= 5692669	55 (1.330)					intergenic (+82/‑88)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
*	?	NC_002947	5695456 =	53 (1.170)	4 (0.090)	4/242	NT	7.8%	coding (124/1272 nt)	pyrC'	dihydroorotase‑like protein
	?	NC_002947	5695501 =	43 (0.980)					coding (169/1272 nt)	pyrC'	dihydroorotase‑like protein
*	?	NC_002947	5697474 =	53 (1.170)	5 (0.120)	4/238	NT	9.2%	coding (52/1344 nt)	hslU	protease HslVU ATPase subunit
	?	NC_002947	5697504 =	48 (1.110)					coding (82/1344 nt)	hslU	protease HslVU ATPase subunit
*	?	NC_002947	5701854 =	54 (1.200)	5 (0.120)	4/234	NT	9.4%	coding (534/852 nt)	phaB	poly(3‑hydroxyalkanoate) depolymerase
	?	NC_002947	5701880 =	45 (1.060)					coding (560/852 nt)	phaB	poly(3‑hydroxyalkanoate) depolymerase
*	?	NC_002947	5713129 =	55 (1.220)	4 (0.090)	4/240	NT	7.1%	coding (522/1623 nt)	ubiB	2‑octaprenylphenol hydroxylase
	?	NC_002947	5713157 =	52 (1.190)					coding (550/1623 nt)	ubiB	2‑octaprenylphenol hydroxylase
*	?	NC_002947	5726880 =	46 (1.020)	4 (0.090)	4/232	NT	9.3%	coding (142/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H
	?	NC_002947	5726901 =	35 (0.830)					coding (121/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H
*	?	NC_002947	5734086 =	62 (1.370)	5 (0.120)	5/224	NT	8.7%	intergenic (‑56/+101)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
	?	NC_002947	5734165 =	49 (1.200)					intergenic (‑135/+22)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
*	?	NC_002947	5743392 =	48 (1.060)	10 (0.250)	7/222	NT	19.1%	intergenic (‑169/+78)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5743446 =	42 (1.040)					intergenic (‑223/+24)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	5758217 =	45 (1.000)	8 (0.190)	7/236	NT	16.5%	intergenic (+185/+333)	PP_5050/PP_5051	transposase/hypothetical protein
	?	NC_002947	5758237 =	38 (0.880)					intergenic (+205/+313)	PP_5050/PP_5051	transposase/hypothetical protein
*	?	NC_002947	= 5759491	26 (0.580)	10 (0.300)	8/184	NT	29.7%	intergenic (+44/+112)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	= 5759519	28 (0.840)					intergenic (+72/+84)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	5773906 =	50 (1.110)	3 (0.070)	3/232	NT	6.8%	coding (413/657 nt)	betI	choline‑responsive transcriptional repressor BetI
	?	NC_002947	5773970 =	36 (0.850)					coding (477/657 nt)	betI	choline‑responsive transcriptional repressor BetI
*	?	NC_002947	= 5774119	59 (1.310)	4 (0.090)	4/236	NT	6.7%	coding (626/657 nt)	betI	choline‑responsive transcriptional repressor BetI
	?	NC_002947	= 5774150	55 (1.280)					coding (657/657 nt)	betI	choline‑responsive transcriptional repressor BetI
*	?	NC_002947	5786485 =	47 (1.040)	4 (0.090)	4/240	NT	8.4%	coding (1433/1461 nt)	PP_5068	hypothetical protein
	?	NC_002947	5786506 =	42 (0.960)					coding (1454/1461 nt)	PP_5068	hypothetical protein
*	?	NC_002947	5786526 =	45 (1.000)	10 (0.220)	5/246	NT	17.8%	intergenic (+13/‑118)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5786615 =	48 (1.070)					intergenic (+102/‑29)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	= 5792896	37 (0.820)	5 (0.120)	4/234	NT	11.0%	coding (491/1419 nt)	gltD	glutamate synthase subunit beta
	?	NC_002947	= 5792916	46 (1.080)					coding (471/1419 nt)	gltD	glutamate synthase subunit beta
*	?	NC_002947	5795612 =	59 (1.310)	3 (0.070)	3/242	NT	5.5%	coding (2344/4446 nt)	gltB	L‑glutamate synthase subunit alpha
	?	NC_002947	5795659 =	46 (1.040)					coding (2297/4446 nt)	gltB	L‑glutamate synthase subunit alpha
*	?	NC_002947	5796762 =	48 (1.060)	4 (0.090)	4/236	NT	7.7%	coding (1194/4446 nt)	gltB	L‑glutamate synthase subunit alpha
	?	NC_002947	5796792 =	50 (1.160)					coding (1164/4446 nt)	gltB	L‑glutamate synthase subunit alpha
*	?	NC_002947	5857410 =	78 (1.730)	6 (0.140)	5/240	NT	7.7%	coding (1281/1392 nt)	PP_5133	membrane protein
	?	NC_002947	5857436 =	68 (1.560)					coding (1307/1392 nt)	PP_5133	membrane protein
*	?	NC_002947	= 5888159	47 (1.040)	6 (0.140)	6/238	NT	11.5%	coding (157/567 nt)	maa	acetyltransferase
	?	NC_002947	= 5888186	47 (1.090)					coding (130/567 nt)	maa	acetyltransferase
*	?	NC_002947	5891373 =	50 (1.110)	3 (0.070)	3/232	NT	6.6%	coding (301/786 nt)	plpB	NLPA lipoprotein
	?	NC_002947	5891399 =	38 (0.900)					coding (275/786 nt)	plpB	NLPA lipoprotein
*	?	NC_002947	5893700 =	65 (1.440)	4 (0.090)	4/234	NT	6.0%	coding (826/990 nt)	cysA	sulfate/thiosulfate ABC transporter ATP‑binding protein
	?	NC_002947	5893748 =	65 (1.530)					coding (778/990 nt)	cysA	sulfate/thiosulfate ABC transporter ATP‑binding protein
*	?	NC_002947	= 5903825	52 (1.150)	9 (0.220)	5/228	NT	16.1%	intergenic (+25/+82)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903887	46 (1.110)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5903827 =	53 (1.170)	7 (0.180)	5/216	NT	13.1%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903887 =	47 (1.200)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	= 5914240	24 (0.530)	11 (0.310)	10/192	NT	41.1%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914280	13 (0.370)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5936806	57 (1.260)	3 (0.070)	3/234	NT	5.4%	coding (267/960 nt)	yhiI	translation‑like protein
	?	NC_002947	= 5936823	51 (1.200)					coding (284/960 nt)	yhiI	translation‑like protein
*	?	NC_002947	5942640 =	49 (1.090)	3 (0.070)	3/238	NT	6.4%	intergenic (‑70/‑31)	PP_5209/PP_5210	hypothetical protein/alcohol dehydrogenase
	?	NC_002947	5942673 =	40 (0.920)					coding (3/978 nt)	PP_5210	alcohol dehydrogenase
*	?	NC_002947	5965514 =	48 (1.060)	3 (0.070)	3/234	NT	6.2%	coding (652/696 nt)	had	(S)‑2‑haloacid dehalogenase
	?	NC_002947	5965558 =	45 (1.060)					coding (696/696 nt)	had	(S)‑2‑haloacid dehalogenase
*	?	NC_002947	= 6000988	35 (0.780)	3 (0.090)	3/188	NT	8.5%	intergenic (+39/+70)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	= 6001022	38 (1.110)					intergenic (+73/+36)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	6005467 =	57 (1.260)	3 (0.070)	3/244	NT	5.4%	coding (274/1395 nt)	ydcJ	metalloprotein
	?	NC_002947	6005524 =	49 (1.100)					coding (331/1395 nt)	ydcJ	metalloprotein
*	?	NC_002947	= 6019326	38 (0.840)	3 (0.080)	3/202	NT	7.9%	intergenic (‑71/+74)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	= 6019356	39 (1.060)					intergenic (‑101/+44)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
*	?	NC_002947	= 6052514	37 (0.820)	4 (0.090)	4/234	NT	7.8%	intergenic (+19/+151)	PP_5304/PP_5305	lipoprotein/epimerase/dehydratase‑like protein
	?	NC_002947	= 6052593	59 (1.390)					intergenic (+98/+72)	PP_5304/PP_5305	lipoprotein/epimerase/dehydratase‑like protein
*	?	NC_002947	6060502 =	44 (0.980)	12 (0.290)	7/228	NT	21.2%	intergenic (+82/+99)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	6060559 =	49 (1.180)					intergenic (+139/+42)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	6071678 =	63 (1.400)	4 (0.090)	4/236	NT	6.1%	intergenic (‑45/+57)	phoU/pstB‑II	phosphate transport‑associated protein/phosphate ABC transporter ATP‑binding protein
	?	NC_002947	6071727 =	64 (1.490)					intergenic (‑94/+8)	phoU/pstB‑II	phosphate transport‑associated protein/phosphate ABC transporter ATP‑binding protein
*	?	NC_002947	6077877 =	52 (1.150)	5 (0.140)	5/200	NT	10.2%	intergenic (‑123/+115)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
	?	NC_002947	6077977 =	46 (1.260)					intergenic (‑223/+15)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
*	?	NC_002947	6112622 =	54 (1.200)	4 (0.090)	3/238	NT	7.5%	coding (179/528 nt)	PP_5363	hypothetical protein
	?	NC_002947	6112656 =	47 (1.090)					coding (145/528 nt)	PP_5363	hypothetical protein
*	?	NC_002947	6133946 =	49 (1.090)	4 (0.090)	4/234	NT	8.2%	intergenic (‑38/‑158)	copA‑II/PP_5381	copper resistance protein A/hypothetical protein
	?	NC_002947	6133971 =	43 (1.010)					intergenic (‑63/‑133)	copA‑II/PP_5381	copper resistance protein A/hypothetical protein
*	?	NC_002947	= 6157155	38 (0.840)	4 (0.090)	4/236	NT	9.3%	coding (539/1068 nt)	PP_5400	hypothetical protein
	?	NC_002947	= 6157195	42 (0.980)					coding (579/1068 nt)	PP_5400	hypothetical protein