New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4018688 =	16 (0.690)	4 (0.180)	3/242	NT	18.0%	coding (1079/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4018719 =	21 (0.940)					coding (1110/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
Rejected: Coverage evenness skew score above cutoff.

GTGAAGCGGCGGCGATGCTTTCATCGCAGGGGAGATACAGGTTGATGGCCGTACCCTGGCCAAGCGTGCTATCGATGACCAGCTGGCCACCGGATTGCCGCACAAAGCCGTAGACCATGGACAGCCCAAGGCCAGTGCCCTGGCCGAGCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4018840‑4018688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTG  >  NC_002947/4018719‑4018803                                                                                                                                                                                                                                                GTGAAGCGGCGGCGATGCTTTCATCGCAGGGGAGATACAGGTTGATGGCCGTACCCTGACCAAGCGTGCTATCGATGACCAGCTGGCCACCGGATTGCCGCACAAAGCCGTAGACCATGGACAGCCCAAGGCCAGTGCCCTGGCCGAGCG                                                                                          <  1:387040/150‑1                                                                                                                              CCAAGGCCAGTGCCCTGGCCGAGCGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTG  >  1:229805/1‑113                                                                                                                              CCAAGGCCAGTGCCCTGGCCGAGCGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTG  <  2:229805/113‑1                                                                                                                              CCAAGGCCAGTGCCCTGGCCGAGCGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCT   >  1:482522/1‑112                                                                                                                              CCAAGGCCAGTGCCCTGGCCGAGCGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCT   <  2:482522/112‑1                                                                                                                                                                                                                                                GTGAAGCGGCGGCGATGCTTTCATCGCAGGGGAGATACAGGTTGATGGCCGTACCCTGGCCAAGCGTGCTATCGATGACCAGCTGGCCACCGGATTGCCGCACAAAGCCGTAGACCATGGACAGCCCAAGGCCAGTGCCCTGGCCGAGCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4018840‑4018688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTG  >  NC_002947/4018719‑4018803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.