| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 174571 = | NA (NA) | 4 (0.180) | 3/240 | NT | NA | noncoding (1369/2902 nt) | PP_23SA | 23S ribosomal RNA |
| ? | NC_002947 | 174602 = | NA (NA) | noncoding (1400/2902 nt) | PP_23SA | 23S ribosomal RNA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CAACTCGTCATCAGCTCTCGGCCTTGAAATCCCGGATTTGCCTAAGATTTCAGCCTACCACCTTAAACCTGGACAACCAACGCCAGGCTGGCCTAACCTTCTCCGTCCCTCCATCGCAATAACTGGAAGTACAGGAATATTAACCTGTTTTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/174724‑174571‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccaGTTATTGCGATGGAGGGACGGAGAAGGTTAGGCCAGCCTGGCGTTGGTTGTCCAGGTTTAAGGTGGTAGGCTGAAATCTTAGGCAAATCCGGGATTTCAAGGCCGAGAGCTGATGACGAGTTGCCTTTAGGCGACGAAGTGGTTG > NC_002947/174602‑174746 CAACTCGTCATCAGCTCTCGGCCTTGAAATCCCGGATTTGCCTAAGATTTCAGCCTACCACCTTAAACCTGGACAACCAACGCCAGGCTGGCCTAACCTTCTCCGTCCCTCCATCGCAATAACTGGAAGTACAGGAATATTAACCTGTTT < 2:401479/150‑1 CTAAGATTTCAGCCTACCACCTTAAACCTGGACAACCAACGCCAGGCTGGCCTAACCTTCTCCGTCCCTCCATCGCAATAACTGGAAGTACAGGAATATTAACCTGTTT < 1:549716/109‑1 CTAAGATTTCAGCCTACCACCTTAAACCTGGACAACCAACGCCAGGCTGGCCTAACCTTCTCCGTCCCTCCATCGCAATAACTGGAAGTACAGGAATATTAACCTGTTT > 2:549716/1‑109 TCGCAATAACTGGAAGTACAGGAATATTAACCTGTTTTCCAGTTATTGCGATGGAGGGACGGAGAAGGTTAGGCCAGCCTGGCGTTGGTTGTCCAGGTTTAAGGTGGTAGGCTGAAATCTTA > 1:287829/1‑122 TCGCAATAACTGGAAGTACAGGAATATTAACCTGTTTTCCAGTTATTGCGATGGAGGGACGGAGAAGGTTAGGCCAGCCTGGCGTTGGTTGTCCAGGTTTAAGGTGGTAGGCTGAAATCTTA < 2:287829/122‑1 AATAACTGGAAGTACAGGAATATTAACCTGTTTTCCAGTTATTGCGATGGAGGGACGGAGAAGGTTAGGCCAGCCTGGCGTTGGTTGTCCAGGTTTAAGGTGGTAGGCTGAAATCTTA < 1:610474/118‑1 AATAACTGGAAGTACAGGAATATTAACCTGTTTTCCAGTTATTGCGATGGAGGGACGGAGAAGGTTAGGCCAGCCTGGCGTTGGTTGTCCAGGTTTAAGGTGGTAGGCTGAAATCTTA > 2:610474/1‑118 TTCCAGTTATTGCGATGGAGGGACGGAGAAGGTTAGGCCAGCCTGGCGTTGGTTGTCCAGGTTTAAGGTGGTAGGCTGAAATCTTAGGCAAATCCGGGATTTCAAGGCCGAGAGCTGATGACGAGTTGCCTTTAGGCGACGAAGTGGTTG > 2:499639/1‑150 TTCCAGTTATTGCGATGGAGGGACGGAGAAGGTTAGGCCAGCCTGGCGTTGGTTGTCCAGGTTTAAGGTGGTAGGCTGAAATCTTAGGCAAATCCGGGATTTCAAGGCCGAGAGCTGATGACGAGTTGCCTTTAGGCGACGAAGTGGTTG > 2:587942/1‑150 CAACTCGTCATCAGCTCTCGGCCTTGAAATCCCGGATTTGCCTAAGATTTCAGCCTACCACCTTAAACCTGGACAACCAACGCCAGGCTGGCCTAACCTTCTCCGTCCCTCCATCGCAATAACTGGAAGTACAGGAATATTAACCTGTTTTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/174724‑174571‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccaGTTATTGCGATGGAGGGACGGAGAAGGTTAGGCCAGCCTGGCGTTGGTTGTCCAGGTTTAAGGTGGTAGGCTGAAATCTTAGGCAAATCCGGGATTTCAAGGCCGAGAGCTGATGACGAGTTGCCTTTAGGCGACGAAGTGGTTG > NC_002947/174602‑174746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |