New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4018688 =	16 (0.690)	4 (0.180)	3/242	NT	18.0%	coding (1079/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4018719 =	21 (0.940)					coding (1110/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
Rejected: Coverage evenness skew score above cutoff.

GCCAATGTCGAAGTGCAAGGCGCCGAAGCCAGGCAACTGGGCCTGGCCGCTGGCCGGTTTCTGCGTATCCGCGTTGAAGACACCGGCATGGGCATGTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTGTATCTCCCCTGCGATGAAAGCATCGCCGC  >  NC_002947/4018546‑4018832                                                                                                                                               |                                                                                                                                                 gcCAATGTCGAAGTGCAAGGCGCCGAAGCCAGGCAACTGGGCCTGGCCGCTGGCCGGTTTCTGCGTATCCGCGTTGAAGACACCGGCATGGGCATGTCCACAACGGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTc                                                                                                                                           >  1:67211/1‑150 (MQ=255)   cAATGTCGAAGTGCAAGGCGCCGAAGCCAGGCAACTGGGCCTGGCCGCTGGCCGGTTTCTGCGTATCCGCGCTGACGACACCGGCATCGGCATCTCCAACCCAGTCCGGCACCGCGACCTCCAGCCCGGCGTCACCACCAACCACCTCgg                                                                                                                                         >  2:468891/1‑150 (MQ=255)                                         gCCTGGCCGCTGGCCGGTTTCTGCGTATCCGCGTTGAAGACACCGGCATGTGCATGTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCt                                                                                                   >  1:356670/1‑150 (MQ=255)                                           ctggccgctggccgGTTTCTGCGTATCCGCGTTGAAGACACCGGCATGGGCATGTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCCGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCttt                                                                                                 <  1:499450/150‑1 (MQ=255)                                              gccgctggccgGTTTCTGCGTATCCGCGTTGAAGACACCGGCATGGGCATGTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTtgtg                                                                                              >  1:433861/1‑150 (MQ=255)                                                              tGCGTATCCGCGTTGAAGACACCGGCATGGGCATGTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGcc                                                                              >  2:84247/1‑150 (MQ=255)                                                                        cgTTGAAGACACCGGCATGGGCATGTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCAt                                                                    <  1:84247/150‑1 (MQ=255)                                                                              aGACACCGGCATGGGCATGTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAg                                                              >  2:74791/1‑150 (MQ=255)                                                                                            gcatgTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATg                                                                                                             >  2:405282/1‑89 (MQ=255)                                                                                            gcatgTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATg                                                                                                             <  1:405282/89‑1 (MQ=255)                                                                                                    aaaGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGcc                                        >  1:142971/1‑150 (MQ=255)                                                                                                                    gcgcgcTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTGTATCTcc                        >  2:461191/1‑150 (MQ=255)                                                                                                                            gAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTGTATCTCCCCTGCGAt                <  1:409104/150‑1 (MQ=255)                                                                                                                            gAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTGTATCTCCCCTGCGAt                <  2:433861/150‑1 (MQ=255)                                                                                                                                ccTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTGTATCTCCCCTGCGATGaaa            >  1:545005/1‑150 (MQ=255)                                                                                                                                ccTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTGTATCTCCCCTGCGATGaaa            <  1:74791/150‑1 (MQ=255)                                                                                                                                          caccaAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTGTATCTCCCCTGCGATGAAAGCATcgccgc  >  2:63124/1‑150 (MQ=255)                                                                                                                                               |                                                                                                                                                 GCCAATGTCGAAGTGCAAGGCGCCGAAGCCAGGCAACTGGGCCTGGCCGCTGGCCGGTTTCTGCGTATCCGCGTTGAAGACACCGGCATGGGCATGTCCAAAGCAGTGATGCAGCGCGCCCTTGAGCCCTTCTTCACCACCAAGCCGCTCGGCCAGGGCACTGGCCTTGGGCTGTCCATGGTCTACGGCTTTGTGCGGCAATCCGGTGGCCAGCTGGTCATCGATAGCACGCTTGGCCAGGGTACGGCCATCAACCTGTATCTCCCCTGCGATGAAAGCATCGCCGC  >  NC_002947/4018546‑4018832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.