Sun Mar 29 17:28:08 2020

/usr/bin/breseq-0.33.1-Linux-x86_64/bin/breseq -j 1 --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -o breseq_processes/1 -r /var/data/KT2440_diff.gb /var/alemutpipe-outputs/good/Pputida_HGL_78_S271_L002_R1_001.good.fq.gz /var/alemutpipe-outputs/good/Pputida_HGL_78_S271_L002_R2_001.good.fq.gz