breseq  version 0.33.1  revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation annotation gene description
RA 188,837 C→T R316C (CGC→TGC)  PP_0165 → GGDEF domain‑containing protein
RA 233,545 C→T G548G (GGC→GGT)  PP_0180 → cytochrome c family protein
RA 476,133 A→T Q141L (CAG→CTG)  tsaD → tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD
RA 1,011,323 +T intergenic (‑258/+192) PP_0871 ← / ← SBRG_Ecoli_galM glycine betaine/carnitine/choline ABC transporter permease/SBRG_Ecoli_galM
RA 1,167,207 T→G I7S (ATC→AGC)  oprB‑I → carbohydrate‑selective porin
MC JC 1,515,811 (33-bp)2→1 pseudogene (715‑747/1851 nt) PP_1325 ← putative lipoprotein
RA 1,856,513 A→G D203G (GAT→GGT)  relA → ATP:GTP 3'‑pyrophosphotransferase
RA 3,004,348 G→A H373H (CAC→CAT)  PP_2623 ← hypothetical protein
RA 4,018,201 G→A intergenic (+144/‑36) mvaB → / → PP_mr44 hydroxymethylglutaryl‑CoA lyase/CrcZ ncRNA

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ NC_002947 15681 15867 187 2 [1] [1] 2 [gyrB] [gyrB]
* * ÷ NC_002947 16714 16765 52 2 [1] [1] 2 PP_5421 hypothetical protein
* * ÷ NC_002947 18489 18545 57 2 [1] [1] 2 PP_0014 transposase
* * ÷ NC_002947 19625 19655 31 2 [1] [0] 2 PP_0015 transposon protein
* * ÷ NC_002947 22464 22525 62 2 [1] [1] 3 PP_0017 transcriptional regulator
* * ÷ NC_002947 26430 26523 94 2 [1] [1] 2 PP_0021 hypothetical protein
* * ÷ NC_002947 27859 27912 54 2 [1] [1] 2 PP_0024 membrane‑associated metal‑dependent hydrolase
* * ÷ NC_002947 28373 28449 77 2 [1] [1] 2 PP_0024 membrane‑associated metal‑dependent hydrolase
* * ÷ NC_002947 29851 29982 132 2 [1] [1] 2 PP_0024/PP_0025 membrane‑associated metal‑dependent hydrolase/hypothetical protein
* * ÷ NC_002947 30441 30547 107 3 [1] [0] 3 PP_0026 cobalt/cadmium/zinc exporter
* * ÷ NC_002947 31172 31342 171 2 [1] [1] 2 [PP_0026] [PP_0026]
* * ÷ NC_002947 33406 33580 175 2 [1] [1] 3 [czcR‑I]–[czrSA] [czcR‑I],[czrSA]
* * ÷ NC_002947 33667 33733 67 2 [0] [1] 2 czrSA metal‑sensor histidine kinase
* * ÷ NC_002947 34348 34435 88 2 [0] [1] 2 czrSA metal‑sensor histidine kinase
* * ÷ NC_002947 43635 43689 55 2 [1] [1] 3 cadA‑I cadmium translocating P‑type ATPase
* * ÷ NC_002947 43771 43865 95 3 [1] [1] 3 cadA‑I cadmium translocating P‑type ATPase
* * ÷ NC_002947 44023 44116 94 2 [1] [1] 2 cadA‑I cadmium translocating P‑type ATPase
* * ÷ NC_002947 47176 47237 62 3 [0] [1] 3 czcA‑I cation efflux system protein
* * ÷ NC_002947 49097 49296 200 2 [1] [1] 2 czcA‑I cation efflux system protein
* * ÷ NC_002947 56654 56764 111 2 [1] [1] 2 PP_0049 hypothetical protein
* * ÷ NC_002947 80546 80649 104 2 [1] [1] 2 tsaC threonylcarbamoyl‑AMP synthase
* * ÷ NC_002947 85039 85104 66 2 [1] [0] 2 aroE/PP_0075 shikimate 5‑dehydrogenase/choline sulfate transporter
* * ÷ NC_002947 91794 91864 71 5 [1] [1] 2 trpA tryptophan synthase subunit alpha
* * ÷ NC_002947 97575 97618 44 2 [1] [1] 2 [PP_0091] [PP_0091]
* * ÷ NC_002947 107700 107784 85 2 [1] [1] 2 PP_0101/PP_5426 sulfate transporter/hypothetical protein
* * ÷ NC_002947 109216 109296 81 2 [1] [1] 2 PP_0103 cytochrome c oxidase subunit 2
* * ÷ NC_002947 117260 117312 53 2 [1] [1] 2 PP_0111/metQ electron transport protein SCO1/SenC/methionine ABC transporter substrate‑binding protein
* * ÷ NC_002947 118035 118151 117 2 [0] [1] 2 [metQ]–[metI] [metQ],[metI]
* * ÷ NC_002947 146332 146408 77 2 [1] [1] 2 PP_0138 membrane protein
* * ÷ NC_002947 146971 147011 41 2 [1] [1] 2 PP_0138 membrane protein
* * ÷ NC_002947 147818 147852 35 2 [1] [1] 2 PP_0139 lipoprotein
* * ÷ NC_002947 154154 154242 89 3 [1] [1] 2 yjbB Na+/Pi‑cotransporter
* * ÷ NC_002947 167776 167868 93 2 [1] [1] 2 gcdR gcdH transcriptional regulator
* * ÷ NC_002947 168353 168521 169 2 [1] [1] 3 [gcdH] [gcdH]
* * ÷ NC_002947 170808 171013–170881 74–206 2 [0] [1] 3 [PP_0159] [PP_0159]
* * ÷ NC_002947 171334–172965 176285–172968 4–4952 2 [1] [1] 2 PP_16SA–[PP_5SA] PP_16SA,PP_23SA,[PP_5SA]
* * ÷ NC_002947 176672–178395 181723–178398 4–5052 2 [1] [0] 2 PP_16SB–[PP_r01] PP_16SB,PP_23SB,[PP_r01]
* * ÷ NC_002947 181861 181878 18 3 [0] [0] 2 PP_r01/PP_5SB 5S ribosomal RNA/5S ribosomal RNA
* * ÷ NC_002947 182082 182125 44 2 [1] [1] 3 PP_0160 ferrioxamine receptor
* * ÷ NC_002947 182512 182589 78 2 [0] [1] 2 PP_0160 ferrioxamine receptor
* * ÷ NC_002947 184813 184973 161 2 [1] [1] 2 PP_0161 putative transmembrane sensor
* * ÷ NC_002947 187935 188041 107 2 [1] [1] 2 PP_0165 GGDEF domain‑containing protein
* * ÷ NC_002947 189416 189576 161 2 [1] [1] 2 PP_0165 GGDEF domain‑containing protein
* * ÷ NC_002947 198031 198097 67 2 [1] [1] 2 PP_0168 putative surface adhesion protein
* * ÷ NC_002947 217561 217608 48 2 [1] [1] 3 PP_0168 putative surface adhesion protein
* * ÷ NC_002947 220534 220629 96 2 [1] [1] 3 [PP_0168] [PP_0168]
* * ÷ NC_002947 221747 221763 17 2 [0] [0] 3 PP_0169 TauD/TfdA family dioxygenase
* * ÷ NC_002947 235325 235367 43 2 [1] [1] 2 PP_0183/argH glutathione S‑transferase/argininosuccinate lyase
* * ÷ NC_002947 236304 236346 43 2 [1] [0] 2 argH argininosuccinate lyase
* * ÷ NC_002947 270369 270382 14 2 [1] [0] 2 PP_0218 sensory box protein
* * ÷ NC_002947 284085 284123 39 2 [1] [1] 2 betT‑II choline/carnitine/betaine transporter
* * ÷ NC_002947 284568 284630 63 2 [1] [0] 4 [atsK] [atsK]
* * ÷ NC_002947 287473 287604 132 2 [1] [1] 2 tauA taurine ABC transporter substrate‑binding protein
* * ÷ NC_002947 316010 316039 30 2 [1] [1] 2 cysQ/PP_0262 3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein
* * ÷ NC_002947 322604 322817 214 2 [1] [1] 2 PP_0267 ferric siderophore receptor
* * ÷ NC_002947 352084 352122 39 2 [1] [1] 2 hisA phosphoribosylformimino‑5‑aminoimidazole carboxamide ribonucleotide isomerase
* * ÷ NC_002947 353051 353171 121 2 [1] [1] 2 [cbcV] [cbcV]
* * ÷ NC_002947 403264 403352 89 2 [1] [1] 2 msrA/PP_0337 peptide methionine sulfoxide reductase MsrA/sensory box protein
* * ÷ NC_002947 422091 422099 9 2 [1] [0] 2 PP_0348 hypothetical protein
* * ÷ NC_002947 432940 433010 71 2 [1] [1] 2 [PP_0355] [PP_0355]
* * ÷ NC_002947 433332 433358 27 2 [1] [1] 2 glcB malate synthase G
* * ÷ NC_002947 433537 433575 39 2 [1] [1] 2 glcB malate synthase G
* * ÷ NC_002947 433712 433854 143 2 [1] [0] 2 glcB malate synthase G
* * ÷ NC_002947 445059 445157 99 2 [1] [1] 2 PP_0367/PP_0368 hypothetical protein/acyl‑CoA dehydrogenase
* * ÷ NC_002947 478322 478340 19 2 [1] [0] 3 PP_0393/cca 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
* * ÷ NC_002947 499228 499252 25 2 [0] [1] 2 uhpA/PP_0411 two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
* * ÷ NC_002947 524148 524322 175 2 [0] [1] 3 tyrS/PP_16SC tyrosine‑‑tRNA ligase/16S ribosomal RNA
* * ÷ NC_002947 536742 536783 42 2 [0] [1] 2 rplJ 50S ribosomal protein L10
* * ÷ NC_002947 537180 537492 313 3 [1] [1] 2 [rplL]–PP_mr07 [rplL],PP_mr07
* * ÷ NC_002947 538536 538634 99 2 [1] [0] 2 rpoB DNA‑directed RNA polymerase subunit beta
* * ÷ NC_002947 538733 538815 83 2 [0] [1] 2 rpoB DNA‑directed RNA polymerase subunit beta
* * ÷ NC_002947 539395 539527 133 2 [1] [1] 3 rpoB DNA‑directed RNA polymerase subunit beta
* * ÷ NC_002947 539693 539738 46 2 [1] [1] 2 rpoB DNA‑directed RNA polymerase subunit beta
* * ÷ NC_002947 540382 540395 14 2 [1] [1] 3 rpoB DNA‑directed RNA polymerase subunit beta
* * ÷ NC_002947 541348 541545 198 2 [1] [1] 2 rpoB DNA‑directed RNA polymerase subunit beta
* * ÷ NC_002947 541902 542005 104 2 [1] [1] 2 rpoC DNA‑directed RNA polymerase subunit beta'
* * ÷ NC_002947 542813 542849 37 2 [1] [0] 4 rpoC DNA‑directed RNA polymerase subunit beta'
* * ÷ NC_002947 544977 545185 209 3 [1] [1] 2 rpoC DNA‑directed RNA polymerase subunit beta'
* * ÷ NC_002947 545616 545772 157 2 [1] [1] 3 rpoC DNA‑directed RNA polymerase subunit beta'
* * ÷ NC_002947 546511 546635 125 2 [1] [1] 2 [rpsL] [rpsL]
* * ÷ NC_002947 547775 547981 207 3 [1] [1] 2 fusA elongation factor G 1
* * ÷ NC_002947 549062 549147 86 2 [1] [1] 3 fusA elongation factor G 1
* * ÷ NC_002947 550903 550998 96 2 [1] [1] 2 [rpsJ] [rpsJ]
* * ÷ NC_002947 552259 552269 11 2 [0] [0] 2 rplD 50S ribosomal protein L4
* * ÷ NC_002947 556378 556405 28 2 [1] [1] 3 [rplX]–[rplE] [rplX],[rplE]
* * ÷ NC_002947 558705 558740 36 2 [1] [1] 2 rplR 50S ribosomal protein L18
* * ÷ NC_002947 558995 559066 72 2 [1] [1] 2 rpsE 30S ribosomal protein S5
* * ÷ NC_002947 561976 562036 61 3 [1] [0] 2 rpsK 30S ribosomal protein S11
* * ÷ NC_002947 577843 578030 188 2 [1] [1] 2 fdoG formate dehydrogenase‑O major subunit
* * ÷ NC_002947 693645 693687 43 2 [1] [1] 2 PP_0595 LysR family transcriptional regulator
* * ÷ NC_002947 694863 694925 63 2 [1] [1] 2 PP_0596 omega‑amino acid‑‑pyruvate aminotransferase
* * ÷ NC_002947 695641 695826 186 2 [1] [1] 2 mmsA‑I methylmalonate‑semialdehyde dehydrogenase
* * ÷ NC_002947 706405 706410 6 2 [0] [1] 2 PP_0599 paraquat‑inducible protein B
* * ÷ NC_002947 706825 707006 182 2 [1] [1] 2 [PP_0599] [PP_0599]
* * ÷ NC_002947 707588 707590 3 2 [0] [0] 2 rpsT/murJ 30S ribosomal protein S20/lipid II flippase
* * ÷ NC_002947 711839 711848 10 2 [0] [0] 2 ileS isoleucine‑‑tRNA ligase
* * ÷ NC_002947 718441 718483 43 2 [1] [0] 3 thiO/PP_0613 FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
* * ÷ NC_002947 725030 725081 52 2 [1] [1] 2 PP_0619 branched‑chain amino acid ABC transporter substrate‑binding protein
* * ÷ NC_002947 749586 749711 126 2 [1] [1] 2 [PP_0639]–[PP_0640] [PP_0639],[PP_0640]
* * ÷ NC_002947 750908 750923 16 2 [1] [1] 2 PP_0640/PP_5450 hypothetical protein/hypothetical protein
* * ÷ NC_002947 791068 791178 111 2 [1] [1] 2 [PP_0677] [PP_0677]
* * ÷ NC_002947 791225 791343 119 2 [1] [1] 2 PP_0678 hypothetical protein
* * ÷ NC_002947 792202 792237 36 2 [1] [1] 2 PP_0678 hypothetical protein
* * ÷ NC_002947 796741 796888 148 2 [1] [0] 2 [PP_0681] [PP_0681]
* * ÷ NC_002947 797024 797129 106 2 [1] [1] 3 PP_0682 inner membrane protein
* * ÷ NC_002947 798653 798689 37 2 [0] [1] 3 [PP_0685] [PP_0685]
* * ÷ NC_002947 812257 812330 74 4 [1] [1] 2 PP_0698/PP_0699 LysR family transcriptional regulator/LysE family transporter
* * ÷ NC_002947 846548 846558 11 2 [0] [0] 2 PP_0729 hypothetical protein
* * ÷ NC_002947 848846 848875 30 2 [1] [1] 3 pcs phosphatidylcholine synthase
* * ÷ NC_002947 854181 854222 42 2 [1] [0] 2 prmC release factor‑(glutamine‑N5) methyltransferase
* * ÷ NC_002947 859184 859249 66 2 [1] [1] 2 PP_0740 MerR family transcriptional regulator
* * ÷ NC_002947 862851 862879 29 2 [0] [1] 3 [yfcH]–[hemH] [yfcH],[hemH]
* * ÷ NC_002947 863897 863923 27 2 [1] [0] 2 [uraA] [uraA]
* * ÷ NC_002947 867922 868041 120 2 [1] [1] 2 PP_0750/mqo‑I hypothetical protein/malate:quinone oxidoreductase
* * ÷ NC_002947 915072 915169 98 2 [1] [1] 4 fruA/PP_0796 PTS fructose transporter subunit IIBC/hypothetical protein
* * ÷ NC_002947 949934 950057 124 3 [1] [1] 2 dsbB/cyoA disulfide bond formation protein B/cytochrome bo terminal oxidase subunit II
* * ÷ NC_002947 950361 950465 105 2 [1] [1] 2 cyoA cytochrome bo terminal oxidase subunit II
* * ÷ NC_002947 952089 952155 67 2 [1] [0] 2 cyoB cytochrome bo terminal oxidase subunit I
* * ÷ NC_002947 953097 953202 106 2 [1] [1] 2 [cyoB]–[cyoC] [cyoB],[cyoC]
* * ÷ NC_002947 955024 955157 134 2 [1] [1] 2 [cyoE] [cyoE]
* * ÷ NC_002947 956609 956787 179 2 [1] [1] 3 [PP_0818] [PP_0818]
* * ÷ NC_002947 978584 978683 100 2 [1] [1] 2 iscS‑I cysteine desulfurase
* * ÷ NC_002947 995366 995434 69 2 [1] [1] 2 PP_0860 sulfite reductase flavoprotein subunit
* * ÷ NC_002947 997593 997746 154 2 [1] [1] 2 [PP_0860] [PP_0860]
* * ÷ NC_002947 1007508 1007555 48 2 [1] [1] 2 PP_0867/yehX FecA‑like outer membrane receptor/ABC transporter ATP‑binding protein
* * ÷ NC_002947 1013380 1013457 78 3 [1] [1] 2 SBRG_Ecoli_galK SBRG_Ecoli_galK
* * ÷ NC_002947 1017070 1017104 35 2 [1] [1] 3 prfC peptide chain release factor 3
* * ÷ NC_002947 1018177 1018194 18 2 [0] [1] 3 prfC/potF‑I peptide chain release factor 3/putrescine‑binding protein
* * ÷ NC_002947 1028343 1028379 37 2 [1] [1] 2 dppA‑I dipeptide ABC transporter substrate‑binding protein
* * ÷ NC_002947 1033070 1033171 102 2 [1] [1] 2 dppA‑III dipeptide ABC transporter substrate‑binding protein
* * ÷ NC_002947 1041511 1041538 28 2 [0] [1] 2 PP_0895 hypothetical protein
* * ÷ NC_002947 1042709 1042786 78 2 [1] [0] 2 PP_0896/PP_0897 carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
* * ÷ NC_002947 1042860 1042944 85 2 [0] [1] 4 PP_0897 class 1 fumarate hydratase
* * ÷ NC_002947 1043081 1043110 30 2 [1] [1] 2 PP_0897 class 1 fumarate hydratase
* * ÷ NC_002947 1098466 1098524 59 2 [1] [1] 2 PP_0949 ATP‑binding protein
* * ÷ NC_002947 1099322 1099456 135 2 [1] [1] 2 [hpf] [hpf]
* * ÷ NC_002947 1100118 1100184 67 2 [0] [1] 2 rpoN RNA polymerase sigma‑54 factor
* * ÷ NC_002947 1100333 1100365 33 3 [1] [1] 2 rpoN RNA polymerase sigma‑54 factor
* * ÷ NC_002947 1105879 1106042 164 2 [1] [1] 2 mlaE phospholipid ABC transporter permease
* * ÷ NC_002947 1111178 1111301 124 2 [1] [1] 2 hisD histidinol dehydrogenase
* * ÷ NC_002947 1116675 1116732 58 3 [1] [1] 2 PP_0971 hypothetical protein
* * ÷ NC_002947 1117951 1118053 103 2 [1] [1] 2 PP_0973 nucleoid‑associated protein
* * ÷ NC_002947 1118490 1118598 109 3 [0] [0] 4 hupN DNA‑binding protein HU
* * ÷ NC_002947 1118779 1118933 155 2 [1] [1] 2 [rlmF] [rlmF]
* * ÷ NC_002947 1122680 1122716 37 2 [1] [0] 2 valS valine‑‑tRNA ligase
* * ÷ NC_002947 1123750 1123762 13 3 [1] [1] 2 pepA cytosol aminopeptidase
* * ÷ NC_002947 1126978 1127029 52 2 [1] [0] 2 PP_0983 membrane protein
* * ÷ NC_002947 1128328 1128408 81 2 [0] [1] 2 [PP_mr13] [PP_mr13]
* * ÷ NC_002947 1129488 1129561 74 2 [1] [1] 3 gcvT‑I aminomethyltransferase
* * ÷ NC_002947 1136990 1137010 21 2 [1] [1] 3 PP_0992 hypothetical protein
* * ÷ NC_002947 1143475 1143577 103 2 [1] [1] 2 arcC/arcB carbamate kinase/ornithine carbamoyltransferase
* * ÷ NC_002947 1161263 1161320 58 2 [1] [1] 2 PP_1013/yihS sensor histidine kinase/aldose‑ketose isomerase
* * ÷ NC_002947 1189267 1189328 62 2 [1] [1] 2 mltF membrane‑bound lytic murein transglycosylase F
* * ÷ NC_002947 1215746 1215842 97 2 [1] [1] 2 [ytnA]–[PP_1060] [ytnA],[PP_1060]
* * ÷ NC_002947 1228903 1228976 74 2 [1] [1] 2 gltL glutamate/aspartate ABC transporter ATP binding protein
* * ÷ NC_002947 1229670 1229771 102 2 [1] [1] 2 gltJ glutamate/aspartate ABC transporter permease
* * ÷ NC_002947 1230450 1230488 39 2 [0] [1] 2 gltJ/gltI glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein
* * ÷ NC_002947 1234764 1234782 19 2 [1] [0] 2 PP_1072 leucine‑rich repeat‑containing protein
* * ÷ NC_002947 1235061 1235227 167 2 [1] [1] 2 PP_1072 leucine‑rich repeat‑containing protein
* * ÷ NC_002947 1238072 1238230 159 2 [1] [1] 4 glpR DNA‑binding transcriptional repressor GlpR
* * ÷ NC_002947 1245194 1245262 69 2 [0] [1] 2 PP_1080 molybdopterin‑binding oxidoreductase
* * ÷ NC_002947 1250630 1250639 10 2 [0] [0] 2 PP_1087 OmpA family outer membrane protein
* * ÷ NC_002947 1255544 1255558 15 2 [1] [1] 3 nth DNA glycosylase/apyrimidinic (AP) lyase
* * ÷ NC_002947 1258684 1258728 45 2 [0] [0] 2 metG methionine‑‑tRNA ligase
* * ÷ NC_002947 1260046 1260085 40 2 [0] [1] 2 metG methionine‑‑tRNA ligase
* * ÷ NC_002947 1262319 1262375 57 2 [1] [1] 2 PP_mr14/dcd cspA regulatory region/deoxycytidine triphosphate deaminase
* * ÷ NC_002947 1290013 1290087 75 2 [1] [1] 2 PP_1122 OmpA family protein
* * ÷ NC_002947 1303530 1303671 142 2 [1] [1] 2 PP_1134 hypothetical protein
* * ÷ NC_002947 1316678 1316734 57 2 [1] [1] 2 PP_1144/rapA membrane protein/RNA polymerase‑associated protein RapA
* * ÷ NC_002947 1321128 1321145 18 4 [1] [0] 2 PP_1148/PP_mr15 hypothetical protein/P20 ncRNA
* * ÷ NC_002947 1388205 1388215 11 2 [0] [1] 2 PP_1204 lipoprotein
* * ÷ NC_002947 1407151 1407223 73 2 [1] [1] 2 queC pre‑queuosine 0 synthase
* * ÷ NC_002947 1408527 1408559 33 2 [1] [1] 2 PP_1227/PP_1228 membrane protein/methyl‑accepting chemotaxis transducer
* * ÷ NC_002947 1414028 1414082 55 2 [1] [1] 3 PP_1230/nadA hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit
* * ÷ NC_002947 1424528 1424541 14 10 [1] [1] 4 PP_1242/PP_1244 hypothetical protein/hypothetical protein
* * ÷ NC_002947 1434317 1435041–1434487 171–725 2 [1] [1] 2 [mqo‑II]–[PP_1252] [mqo‑II],[PP_1252]
* * ÷ NC_002947 1448091 1448114 24 2 [1] [1] 2 ghrB/PP_1262 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
* * ÷ NC_002947 1467951 1467991 41 3 [1] [1] 2 algI/algL alginate O‑acetylase AlgI/alginate lyase
* * ÷ NC_002947 1469120 1469208 89 2 [1] [1] 2 [algL]–[algX] [algL],[algX]
* * ÷ NC_002947 1478230 1478310 81 2 [1] [1] 2 algD GDP‑mannose 6‑dehydrogenase
* * ÷ NC_002947 1481389 1481449 61 3 [1] [1] 3 PP_1290 polysaccharide deacetylase family protein
* * ÷ NC_002947 1481876 1481971 96 2 [1] [1] 2 PP_1290 polysaccharide deacetylase family protein
* * ÷ NC_002947 1491986 1492094 109 10 [1] [1] 2 [degS] [degS]
* * ÷ NC_002947 1494228 1494266 39 2 [1] [0] 2 ybgI/cysD metal‑binding hydrolase/oxidase/sulfate adenylyltransferase subunit 2
* * ÷ NC_002947 1494435 1494496 62 2 [1] [1] 2 cysD sulfate adenylyltransferase subunit 2
* * ÷ NC_002947 1507994 1508104 111 2 [1] [1] 4 tas/rplM NAD(P)‑linked reductase/50S ribosomal protein L13
* * ÷ NC_002947 1511875 1511976 102 3 [1] [0] 2 [sspA] [sspA]
* * ÷ NC_002947 1521457 1521582 126 2 [1] [1] 2 ftsI peptidoglycan DD transpeptidase
* * ÷ NC_002947 1536782 1536802 21 5 [1] [0] 2 PP_1344 hypothetical protein
* * ÷ NC_002947 1549396 1549546 151 2 [1] [1] 2 [mdfA]–[ampG] [mdfA],[ampG]
* * ÷ NC_002947 1570057 1570109 53 2 [1] [1] 2 pitB phosphate transporter
* * ÷ NC_002947 1570828 1570845 18 5 [1] [0] 2 [PP_1374] [PP_1374]
* * ÷ NC_002947 1571046 1571072 27 3 [0] [1] 2 PP_1374/pcaR hypothetical protein/pca regulon transcriptional regulator
* * ÷ NC_002947 1579473 1579554 82 3 [1] [1] 4 [pcaP] [pcaP]
* * ÷ NC_002947 1597579 1597619 41 2 [0] [0] 2 PP_1397 hypothetical protein
* * ÷ NC_002947 1606083 1606128 46 2 [1] [0] 2 bglX beta‑D‑glucoside glucohydrolase
* * ÷ NC_002947 1644569 1644619 51 2 [1] [1] 5 czcR‑III/PP_1439 response regulator/hypothetical protein
* * ÷ NC_002947 1645931 1646024 94 2 [1] [1] 2 [cmoB]–[cmoA] [cmoB],[cmoA]
* * ÷ NC_002947 1667652 1667694 43 2 [0] [1] 2 purT phosphoribosylglycinamide formyltransferase
* * ÷ NC_002947 1668115 1668190 76 2 [1] [0] 2 yhjE metabolite transport protein YhjE
* * ÷ NC_002947 1671830 1671881 52 3 [1] [0] 2 PP_1460/ffh membrane protein/signal recognition particle GTPase subunit
* * ÷ NC_002947 1688184 1688215 32 2 [1] [1] 2 recJ/PP_1478 ssDNA‑specific exonuclease RecJ/xenobiotic reductase
* * ÷ NC_002947 1717054 1717093 40 2 [1] [1] 3 ppc/adk phosphoenolpyruvate carboxylase/adenylate kinase
* * ÷ NC_002947 1741920 1741940 21 2 [1] [1] 2 dapD 2,3,4,5‑tetrahydropyridine‑2,6‑dicarboxylate N‑succinyltransferase
* * ÷ NC_002947 1747391 1747478 88 2 [1] [1] 2 PP_1539 hypothetical protein
* * ÷ NC_002947 1747708 1747838 131 2 [0] [1] 3 PP_1539 hypothetical protein
* * ÷ NC_002947 1762231 1762255 25 2 [1] [1] 2 PP_1563 terminase large subunit
* * ÷ NC_002947 1764002 1764054 53 2 [0] [0] 2 PP_1565 HK97 family portal protein
* * ÷ NC_002947 1764540 1764564 25 2 [1] [1] 2 PP_1565 HK97 family portal protein
* * ÷ NC_002947 1765290 1765421 132 2 [1] [1] 2 PP_1566 peptidase U35
* * ÷ NC_002947 1765777 1765842 66 2 [1] [0] 2 [PP_1566] [PP_1566]
* * ÷ NC_002947 1769241 1769261 21 2 [0] [1] 2 PP_1573 major tail protein
* * ÷ NC_002947 1770330 1770475 146 2 [1] [1] 2 [PP_1575] [PP_1575]
* * ÷ NC_002947 1787540 1787563 24 2 [1] [1] 2 glnD uridylyltransferase
* * ÷ NC_002947 1787705 1787762 58 3 [1] [0] 2 glnD uridylyltransferase
* * ÷ NC_002947 1789006 1789143 138 2 [1] [1] 2 [glnD]–[map] [glnD],[map]
* * ÷ NC_002947 1791023 1791092 70 2 [1] [1] 2 rpsB/tsf 30S ribosomal protein S2/elongation factor Ts
* * ÷ NC_002947 1791950 1792107 158 2 [1] [1] 5 [tsf] [tsf]
* * ÷ NC_002947 1794525 1794627 103 2 [1] [0] 2 cdsA CTP:phosphatidate cytidyltransferase
* * ÷ NC_002947 1837530 1837612 83 2 [1] [1] 2 PP_1635 two‑component system response regulator
* * ÷ NC_002947 1858983 1859019 37 2 [1] [1] 2 mazG modified nucleoside triphosphate pyrophosphohydrolase
* * ÷ NC_002947 1860026 1860134 109 2 [1] [1] 2 PP_1659 hypothetical protein
* * ÷ NC_002947 1899158 1899187 30 2 [1] [1] 2 PP_1699 2‑pyrone‑4,6‑dicarboxylic acid hydrolase
* * ÷ NC_002947 1899741 1899768 28 2 [0] [0] 2 [PP_1700] [PP_1700]
* * ÷ NC_002947 1926510 1926550 41 2 [1] [1] 2 [PP_1720] [PP_1720]
* * ÷ NC_002947 1930705 1930722 18 4 [1] [1] 2 PP_1725/PP_1726 hypothetical protein/ABC transporter substrate‑binding protein
* * ÷ NC_002947 1935392 1935430 39 2 [1] [1] 2 [apeB] [apeB]
* * ÷ NC_002947 1937587 1937616 30 2 [1] [1] 3 rluA/minE bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
* * ÷ NC_002947 1975339 1975433 95 2 [1] [1] 2 mtnA methylthioribose‑1‑phosphate isomerase
* * ÷ NC_002947 1975748 1975835 88 2 [1] [1] 2 mtnA/PP_mr25 methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
* * ÷ NC_002947 1978778 1978783 6 2 [0] [1] 5 gyrA DNA gyrase subunit A
* * ÷ NC_002947 1986748 1986805 58 2 [1] [1] 2 PP_1774 hypothetical protein
* * ÷ NC_002947 1997599 1997677 79 2 [1] [0] 2 PP_1780 mannosyltransferase
* * ÷ NC_002947 1999723 1999830 108 2 [0] [1] 3 [PP_1781] [PP_1781]
* * ÷ NC_002947 2001342 2001579 238 2 [1] [1] 3 rfbC dTDP‑4‑dehydrorhamnose 3,5‑epimerase
* * ÷ NC_002947 2002073 2002324 252 2 [0] [0] 2 rfbA dTDP‑glucose pyrophosphorylase
* * ÷ NC_002947 2002366 2002398 33 2 [0] [0] 2 rfbA dTDP‑glucose pyrophosphorylase
* * ÷ NC_002947 2002644 2002675 32 2 [1] [1] 2 rfbD dTDP‑4‑dehydrorhamnose reductase
* * ÷ NC_002947 2008675 2008737 63 2 [1] [1] 2 PP_1787 hypothetical protein
* * ÷ NC_002947 2009141 2009291 151 2 [1] [1] 2 PP_1787 hypothetical protein
* * ÷ NC_002947 2010104 2010223 120 3 [1] [1] 2 PP_1788 hypothetical protein
* * ÷ NC_002947 2012513 2012563 51 3 [1] [1] 2 PP_1791 aldolase/synthase
* * ÷ NC_002947 2015858 2015901 44 2 [1] [1] 2 PP_1792 group 2 family glycosyl transferase
* * ÷ NC_002947 2016064 2016091 28 2 [0] [1] 2 PP_1792 group 2 family glycosyl transferase
* * ÷ NC_002947 2018805 2019189 385 2 [1] [1] 2 [PP_1793]–[PP_1794] [PP_1793],[PP_1794]
* * ÷ NC_002947 2042472 2042509 38 3 [0] [1] 3 PP_1810/PP_5478 hypothetical protein/hypothetical protein
* * ÷ NC_002947 2043153 2043314 162 2 [1] [1] 2 PP_mr27/rffE C4 ncRNA/UDP‑N‑acetylglucosamine‑2‑epimerase
* * ÷ NC_002947 2068178 2068220 43 2 [1] [1] 8 PP_1838/PP_1839 membrane protein/hypothetical protein
* * ÷ NC_002947 2068823 2068858 36 2 [1] [1] 2 PP_1840 hypothetical protein
* * ÷ NC_002947 2072130 2072141 12 2 [1] [0] 2 PP_1843 Mg(2+)/Co(2+) transporter
* * ÷ NC_002947 2104980 2104997 18 2 [1] [0] 2 PP_1875/PP_1876 two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
* * ÷ NC_002947 2130868 2131014 147 2 [1] [1] 2 PP_1887 hypothetical protein
* * ÷ NC_002947 2131774 2131827 54 2 [1] [1] 2 PP_1887 hypothetical protein
* * ÷ NC_002947 2132773 2132785 13 2 [0] [1] 3 PP_1887 hypothetical protein
* * ÷ NC_002947 2137518 2137553 36 2 [1] [1] 3 PP_1890 type I pili chaperone protein FimC
* * ÷ NC_002947 2138828 2138902 75 2 [1] [1] 2 PP_1892 hypothetical protein
* * ÷ NC_002947 2141370 2141433 64 2 [1] [1] 2 fadE medium‑long chain acyl‑CoA dehydrogenase
* * ÷ NC_002947 2172471 2172515 45 2 [0] [1] 2 PP_1921 hypothetical protein
* * ÷ NC_002947 2184192 2184401 210 2 [1] [1] 2 [PP_1931] [PP_1931]
* * ÷ NC_002947 2190106 2190250 145 2 [1] [1] 2 PP_1936 membrane protein
* * ÷ NC_002947 2193839 2194055 217 2 [1] [1] 3 PP_5492 hypothetical protein
* * ÷ NC_002947 2196566 2196631 66 2 [0] [1] 2 PP_1937 helicase
* * ÷ NC_002947 2201540 2201571 32 2 [0] [0] 2 PP_1941 hypothetical protein
* * ÷ NC_002947 2203553 2203584 32 3 [0] [1] 3 purU‑III formyltetrahydrofolate deformylase
* * ÷ NC_002947 2204413 2204526 114 2 [1] [1] 2 PP_1944 aminomethyltransferase
* * ÷ NC_002947 2206193 2206342 150 2 [1] [1] 2 [folD‑I] [folD‑I]
* * ÷ NC_002947 2208285 2208370 86 2 [1] [1] 2 [PP_1947]–[PP_1948] [PP_1947],[PP_1948]
* * ÷ NC_002947 2214316 2214421 106 2 [1] [1] 2 PP_1952 metallo‑beta‑lactamase family protein
* * ÷ NC_002947 2215678 2215892 215 2 [1] [1] 2 PP_1954 hypothetical protein
* * ÷ NC_002947 2216646 2217082 437 2 [1] [1] 3 [PP_1954]–[PP_1955] [PP_1954],[PP_1955]
* * ÷ NC_002947 2217218 2217268 51 2 [1] [0] 2 PP_1955 cytochrome P450 family protein
* * ÷ NC_002947 2225254 2225336 83 2 [1] [1] 2 [PP_1960] [PP_1960]
* * ÷ NC_002947 2228104 2228216 113 2 [1] [1] 2 PP_1962 site‑specific recombinase
* * ÷ NC_002947 2231639 2231695 57 2 [1] [1] 2 PP_1964 dGMP/dTMP/dhydroxyCMP kinase
* * ÷ NC_002947 2246552 2246691 140 2 [1] [1] 3 [PP_t25]–[PP_t26] [PP_t25],[PP_t26]
* * ÷ NC_002947 2298874 2299069 196 2 [1] [1] 2 [PP_2019]–[PP_2020] [PP_2019],[PP_2020]
* * ÷ NC_002947 2300807 2300857 51 2 [0] [0] 2 PP_5496/PP_2023 hypothetical protein/glutathione S‑transferase family protein
* * ÷ NC_002947 2377191 2377293 103 3 [1] [0] 2 PP_2081 phosphoenolpyruvate synthase regulatory protein
* * ÷ NC_002947 2380509 2380632 124 2 [1] [1] 3 [ppsA] [ppsA]
* * ÷ NC_002947 2405492 2405548 57 3 [1] [1] 2 evgA/dgt two‑component system response regulator/deoxyguanosinetriphosphate triphosphohydrolase‑like protein
* * ÷ NC_002947 2434917 2434935 19 3 [1] [0] 3 PP_2129/PP_2130 hypothetical protein/lytic transglycosylase
* * ÷ NC_002947 2439074 2439115 42 2 [0] [0] 2 uup/PP_2132 ABC transporter ATP‑binding protein/universal stress protein
* * ÷ NC_002947 2439864 2439968 105 2 [1] [1] 2 PP_2133 hypothetical protein
* * ÷ NC_002947 2441995 2442164 170 3 [1] [1] 2 [fadB] [fadB]
* * ÷ NC_002947 2463455 2463799 345 2 [1] [1] 2 sthA pyridine nucleotide transhydrogenase
* * ÷ NC_002947 2464596 2464691 96 2 [1] [1] 3 ugpQ glycerophosphoryl diester phosphodiesterase
* * ÷ NC_002947 2479140 2479160 21 3 [1] [0] 4 PP_2167/tal PhoD‑like phosphatase/transaldolase
* * ÷ NC_002947 2481509 2481572 64 2 [1] [1] 2 PP_2170 chorismate mutase family protein
* * ÷ NC_002947 2483361 2483487 127 2 [1] [1] 2 PP_2172 hypothetical protein
* * ÷ NC_002947 2486591 2486832 242 2 [1] [1] 2 PP_2176 transcriptional regulator, LysR family
* * ÷ NC_002947 2487797 2487976 180 2 [1] [1] 2 PP_2177 transcriptional regulator
* * ÷ NC_002947 2586848 2586896 49 2 [1] [1] 2 PP_2263 sugar ABC transporter permease
* * ÷ NC_002947 2595742 2595861 120 2 [1] [1] 2 PP_2268 endodeoxyribonuclease I
* * ÷ NC_002947 2597133 2597176 44 2 [1] [0] 2 PP_2270 DNA primase/helicase
* * ÷ NC_002947 2603944 2604086 143 2 [1] [1] 3 PP_2277 hypothetical protein
* * ÷ NC_002947 2605184 2605398 215 2 [1] [1] 2 [PP_2278]–[PP_5512] [PP_2278],[PP_5512]
* * ÷ NC_002947 2609881 2609907 27 2 [0] [0] 2 [PP_2283] [PP_2283]
* * ÷ NC_002947 2610172 2610214 43 3 [1] [1] 2 PP_2283 tail tubular protein A
* * ÷ NC_002947 2610995 2611093 99 2 [1] [1] 2 PP_2284 tail tubular protein B
* * ÷ NC_002947 2611264 2611372 109 2 [1] [1] 2 PP_2284 tail tubular protein B
* * ÷ NC_002947 2615903 2615969 67 2 [0] [1] 3 PP_2286 hypothetical protein
* * ÷ NC_002947 2618319 2618383 65 2 [1] [1] 2 PP_2287 internal core protein
* * ÷ NC_002947 2618718 2618776 59 2 [1] [1] 2 PP_2287 internal core protein
* * ÷ NC_002947 2618905 2618932 28 2 [1] [1] 3 PP_2287 internal core protein
* * ÷ NC_002947 2620363 2620398 36 2 [1] [1] 2 PP_2287 internal core protein
* * ÷ NC_002947 2625683 2625789 107 2 [1] [1] 2 PP_2293 DNA maturase B
* * ÷ NC_002947 2625926 2626029 104 2 [1] [1] 2 PP_2293 DNA maturase B
* * ÷ NC_002947 2627459 2627540 82 3 [1] [1] 2 PP_5515/PP_5516 hypothetical protein/hypothetical protein
* * ÷ NC_002947 2628334 2628400 67 2 [1] [0] 2 PP_5517/PP_2295 hypothetical protein/antirestriction protein
* * ÷ NC_002947 2632397 2632459 63 3 [1] [1] 2 tig trigger factor
* * ÷ NC_002947 2655458 2655469 12 2 [0] [1] 2 oprI/PP_mr32 major outer membrane lipoprotein/P14 ncRNA
* * ÷ NC_002947 2668966 2669043 78 3 [1] [1] 2 [prpC] [prpC]
* * ÷ NC_002947 2672934 2673081 148 2 [1] [1] 2 [prpF] [prpF]
* * ÷ NC_002947 2675640 2675712 73 4 [1] [1] 2 acnB aconitate hydratase B
* * ÷ NC_002947 2694520 2694535 16 2 [1] [0] 2 PP_2356 phytochrome family protein
* * ÷ NC_002947 2696098 2696239 142 2 [1] [1] 2 PP_2357 type I pili subunit CsuB
* * ÷ NC_002947 2709154 2709205 52 2 [1] [0] 2 PP_2369 leucine‑rich repeat‑containing protein
* * ÷ NC_002947 2718940 2719185 246 2 [0] [1] 2 metH cobalamin‑dependent methionine synthase
* * ÷ NC_002947 2719394 2719426 33 3 [1] [1] 2 metH cobalamin‑dependent methionine synthase
* * ÷ NC_002947 2719563 2719607 45 2 [1] [1] 2 metH cobalamin‑dependent methionine synthase
* * ÷ NC_002947 2763993 2764300 308 2 [1] [0] 2 [PP_2412]–[PP_2413] [PP_2412],[PP_2413]
* * ÷ NC_002947 2804510 2804538 29 2 [1] [0] 2 ansB glutaminase‑asparaginase
* * ÷ NC_002947 2825260 2825278 19 2 [1] [0] 2 PP_2473/PP_2474 hypothetical protein/glutathione S‑transferase family protein
* * ÷ NC_002947 2837078 2837132 55 2 [1] [1] 2 PP_2485 hypothetical protein
* * ÷ NC_002947 2842042 2842239 198 2 [1] [1] 2 [PP_2489] [PP_2489]
* * ÷ NC_002947 2875992 2876110 119 3 [1] [1] 2 PP_2522/PP_2524 transposase/HD domain‑containing protein
* * ÷ NC_002947 2923637 2923731 95 2 [1] [1] 2 PP_2561 hemolysin‑type calcium‑binding bacteriocin
* * ÷ NC_002947 2925049 2925188 140 2 [1] [1] 2 PP_2561 hemolysin‑type calcium‑binding bacteriocin
* * ÷ NC_002947 2926414 2926513 100 2 [1] [0] 2 PP_2561 hemolysin‑type calcium‑binding bacteriocin
* * ÷ NC_002947 2928657 2928688 32 2 [0] [1] 2 PP_2563 antibiotic biosynthesis protein
* * ÷ NC_002947 2959616 2959662 47 2 [1] [1] 3 PP_2586/PP_2587 putative amino acid transporter/LuxR family transcriptional regulator
* * ÷ NC_002947 2963729 2963815 87 2 [1] [1] 3 PP_2589/PP_2590 aldehyde dehydrogenase family protein/ferric siderophore receptor
* * ÷ NC_002947 2998302 2998330 29 2 [1] [1] 2 PP_2617 hypothetical protein
* * ÷ NC_002947 3003005 3003046 42 2 [1] [0] 2 PP_2621 hypothetical protein
* * ÷ NC_002947 3048460 3048526 67 2 [0] [1] 2 pstS phosphate ABC transporter substrate‑binding protein
* * ÷ NC_002947 3048882 3048937 56 2 [1] [1] 2 pstS phosphate ABC transporter substrate‑binding protein
* * ÷ NC_002947 3052175 3052273 99 2 [1] [1] 2 [PP_2660] [PP_2660]
* * ÷ NC_002947 3054958 3055069 112 2 [1] [1] 2 [PP_2662] [PP_2662]
* * ÷ NC_002947 3056928 3057047 120 2 [1] [1] 2 PP_2664 two‑component system sensor histidine kinase/response regulator
* * ÷ NC_002947 3057323 3057430 108 3 [1] [1] 2 PP_2664 two‑component system sensor histidine kinase/response regulator
* * ÷ NC_002947 3058115 3058303 189 3 [1] [1] 2 [PP_2664]–[agmR] [PP_2664],[agmR]
* * ÷ NC_002947 3081057 3081136 80 2 [1] [1] 3 [PP_2686] [PP_2686]
* * ÷ NC_002947 3115850 3115979 130 2 [1] [1] 3 [PP_2724]–[pfpI] [PP_2724],[pfpI]
* * ÷ NC_002947 3116116 3116131 16 2 [0] [0] 2 pfpI protease PfpI
* * ÷ NC_002947 3157265 3157277 13 2 [1] [1] 2 PP_2768 branched‑chain amino acid ABC transporter permease
* * ÷ NC_002947 3178537 3178586 50 2 [1] [0] 2 PP_2785 hypothetical protein
* * ÷ NC_002947 3180709 3180781 73 2 [1] [0] 2 PP_2787 transporter
* * ÷ NC_002947 3201138 3201199 62 2 [1] [0] 2 dhaT/PP_2804 1,3‑propanediol dehydrogenase/alpha/beta family hydrolase
* * ÷ NC_002947 3202789 3202918 130 2 [1] [1] 2 ethA FAD‑containing monooxygenase EthA
* * ÷ NC_002947 3208757 3208847 91 2 [1] [1] 2 PP_2810 hypothetical protein
* * ÷ NC_002947 3312429 3312486 58 2 [1] [1] 3 csiR DNA‑binding transcriptional repressor
* * ÷ NC_002947 3351319 3351427 109 2 [1] [1] 4 PP_2942 two‑component system response regulator
* * ÷ NC_002947 3352071 3352189 119 2 [1] [1] 2 PP_2943 cytochrome c551 peroxidase
* * ÷ NC_002947 3352965 3353003 39 3 [1] [1] 2 PP_2944 sensor histidine kinase
* * ÷ NC_002947 3353657 3353742 86 2 [1] [0] 2 PP_2944 sensor histidine kinase
* * ÷ NC_002947 3353871 3353987 117 3 [1] [1] 2 PP_2944 sensor histidine kinase
* * ÷ NC_002947 3368928 3369157 230 2 [1] [1] 2 PP_2960 transcriptional regulator, AraC family
* * ÷ NC_002947 3369686 3369767 82 2 [1] [1] 2 PP_2961 LysR family transcriptional regulator
* * ÷ NC_002947 3370079 3370113 35 3 [1] [1] 2 PP_2961 LysR family transcriptional regulator
* * ÷ NC_002947 3370327 3370402 76 2 [0] [1] 3 PP_2962 alcohol dehydrogenase
* * ÷ NC_002947 3372547 3372654 108 3 [1] [0] 2 PP_2964 transposase
* * ÷ NC_002947 3378385 3378415 31 2 [1] [1] 2 PP_2971 transposase
* * ÷ NC_002947 3379656 3379696 41 2 [1] [1] 2 PP_2974 sulfatase
* * ÷ NC_002947 3381870 3381890 21 2 [0] [0] 2 PP_mr38 ALIL regulatory region
* * ÷ NC_002947 3386102 3386188 87 2 [0] [1] 2 tnpT‑I cointegrate resolution protein T
* * ÷ NC_002947 3395823 3395902 80 2 [1] [1] 3 PP_2994 FMN‑binding oxidoreductase
* * ÷ NC_002947 3396270 3396362 93 2 [1] [1] 2 PP_2994 FMN‑binding oxidoreductase
* * ÷ NC_002947 3436477 3436531 55 3 [1] [1] 2 PP_3047 hypothetical protein
* * ÷ NC_002947 3471792 3471845 54 2 [1] [1] 2 [PP_3081] [PP_3081]
* * ÷ NC_002947 3504157 3504178 22 2 [0] [1] 2 PP_5563/PP_5565 membrane protein/hypothetical protein
* * ÷ NC_002947 3514271 3514351 81 2 [1] [1] 2 PP_3106 hypothetical protein
* * ÷ NC_002947 3521635–3521696 3521714 19–80 3 [1] [1] 2 PP_5576/PP_5578 hypothetical protein/hypothetical protein
* * ÷ NC_002947 3523518 3523591 74 3 [1] [1] 2 PP_5579 hypothetical protein
* * ÷ NC_002947 3579255 3579613 359 2 [1] [1] 2 PP_3155 ferric siderophore receptor
* * ÷ NC_002947 3585558 3585715 158 2 [0] [1] 2 benR BenABC operon transcriptional activator
* * ÷ NC_002947 3614924 3615085 162 2 [1] [1] 2 PP_3183 SCO1/SenC family protein
* * ÷ NC_002947 3616766 3616841 76 2 [1] [1] 3 mcoA Mn(II) copper oxidase A
* * ÷ NC_002947 3616978 3616985 8 2 [0] [0] 2 mcoA Mn(II) copper oxidase A
* * ÷ NC_002947 3674050 3674090 41 2 [0] [1] 2 PP_3232 acetyltransferase
* * ÷ NC_002947 3726314 3726367 54 2 [1] [0] 3 [paaX] [paaX]
* * ÷ NC_002947 3740736 3740799 64 2 [0] [1] 2 PP_3302 RND family transporter
* * ÷ NC_002947 3741362 3741428 67 2 [1] [1] 3 PP_3302 RND family transporter
* * ÷ NC_002947 3744194 3744212 19 2 [1] [1] 2 PP_3303 3‑oxoacyl‑ACP synthase
* * ÷ NC_002947 3745874 3746049 176 2 [1] [1] 2 [PP_3305] [PP_3305]
* * ÷ NC_002947 3769223 3769392 170 2 [1] [1] 2 PP_3326/PP_3328 hypothetical protein/ring‑cleaving dioxygenase
* * ÷ NC_002947 3780877 3780910 34 2 [1] [0] 2 PP_3337 membrane protein
* * ÷ NC_002947 3781342 3781458 117 2 [1] [1] 3 [PP_3339] [PP_3339]
* * ÷ NC_002947 3781743 3781815 73 2 [1] [1] 2 PP_3339 hypothetical protein
* * ÷ NC_002947 3782605 3782747 143 2 [1] [1] 2 PP_3340 TonB‑dependent receptor
* * ÷ NC_002947 3808319 3808337 19 2 [1] [1] 2 PP_3361 aminotransferase
* * ÷ NC_002947 3848015 3848026 12 2 [1] [1] 2 PP_3392 hypothetical protein
* * ÷ NC_002947 3850692 3850735 44 2 [1] [1] 2 [PP_3395] [PP_3395]
* * ÷ NC_002947 3903497 3903576 80 2 [1] [1] 3 PP_3441 hypothetical protein
* * ÷ NC_002947 3904109 3904253 145 2 [1] [1] 2 [PP_3441] [PP_3441]
* * ÷ NC_002947 3905665 3905985 321 4 [1] [1] 2 PP_3443 glyceraldehyde‑3‑phosphate dehydrogenase
* * ÷ NC_002947 3906930 3906989 60 2 [1] [1] 2 PP_3445 hypothetical protein
* * ÷ NC_002947 3956087 3956117 31 2 [0] [0] 2 PP_3486/PP_3487 cytochrome c/hypothetical protein
* * ÷ NC_002947 3990603 3990646 44 2 [1] [1] 2 PP_3513/oplB LysR family transcriptional regulator/5‑oxoprolinase B
* * ÷ NC_002947 4020403 4020532 130 3 [1] [1] 2 PP_3543 iron‑sulfur cluster‑binding protein
* * ÷ NC_002947 4054885 4054969 85 2 [1] [1] 3 [oprB‑III] [oprB‑III]
* * ÷ NC_002947 4065044 4065052 9 2 [1] [1] 3 pgm phosphoglucomutase
* * ÷ NC_002947 4072854 4072918 65 3 [0] [0] 3 mdtC multidrug transporter membrane protein
* * ÷ NC_002947 4077042 4077124 83 2 [1] [1] 2 mdtB multidrug transporter membrane protein
* * ÷ NC_002947 4084534 4084544 11 2 [0] [1] 2 sdaC/amaC serine:H+ symport permease/D‑lysine aminotransferase
* * ÷ NC_002947 4107479 4107562 84 2 [1] [1] 3 [PP_3610] [PP_3610]
* * ÷ NC_002947 4107682 4107813 132 3 [1] [1] 2 PP_3611 hypothetical protein
* * ÷ NC_002947 4108894 4108923 30 2 [1] [1] 3 PP_3612 TonB‑dependent receptor
* * ÷ NC_002947 4109576 4109605 30 2 [0] [1] 2 PP_3612 TonB‑dependent receptor
* * ÷ NC_002947 4110435 4110569 135 4 [1] [1] 2 PP_3612 TonB‑dependent receptor
* * ÷ NC_002947 4154998 4155057 60 2 [1] [1] 3 PP_3654/PP_3655 leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
* * ÷ NC_002947 4173308 4173370 63 2 [1] [1] 3 katG catalase‑peroxidase
* * ÷ NC_002947 4175160 4175209 50 2 [0] [1] 3 katG/PP_3669 catalase‑peroxidase/LysR family transcriptional regulator
* * ÷ NC_002947 4183215 4183284 70 2 [1] [1] 3 PP_3677 hypothetical protein
* * ÷ NC_002947 4189443 4189557 115 2 [1] [1] 2 PP_3681 putative Helicase
* * ÷ NC_002947 4192272 4192277 6 2 [0] [0] 2 PP_3683 hypothetical protein
* * ÷ NC_002947 4197424 4197469 46 2 [1] [1] 2 PP_5613/PP_5614 hypothetical protein/hypothetical protein
* * ÷ NC_002947 4204596 4204657 62 2 [0] [1] 2 PP_3689/PP_3690 serine/threonine protein phosphatase/hypothetical protein
* * ÷ NC_002947 4206049 4206179 131 2 [0] [1] 2 [PP_3691] [PP_3691]
* * ÷ NC_002947 4207189 4207242 54 2 [1] [1] 2 PP_3691 DNA helicase‑related protein
* * ÷ NC_002947 4207731 4207762 32 2 [0] [0] 2 PP_3691 DNA helicase‑related protein
* * ÷ NC_002947 4207848 4207984 137 2 [0] [1] 2 PP_3691 DNA helicase‑related protein
* * ÷ NC_002947 4210476 4210523 48 2 [1] [1] 2 PP_3691 DNA helicase‑related protein
* * ÷ NC_002947 4211385 4211401 17 2 [1] [1] 2 PP_3691 DNA helicase‑related protein
* * ÷ NC_002947 4212042 4212184 143 2 [0] [1] 2 PP_3691 DNA helicase‑related protein
* * ÷ NC_002947 4212340 4212468 129 2 [0] [1] 2 PP_3691 DNA helicase‑related protein
* * ÷ NC_002947 4214743 4214854 112 2 [0] [1] 3 PP_3692 hypothetical protein
* * ÷ NC_002947 4214991 4215006 16 2 [0] [1] 2 PP_3692 hypothetical protein
* * ÷ NC_002947 4215478 4215592 115 2 [1] [1] 2 PP_3692 hypothetical protein
* * ÷ NC_002947 4216392 4216534 143 2 [0] [1] 2 [PP_3693] [PP_3693]
* * ÷ NC_002947 4218936 4219125 190 2 [1] [1] 2 PP_3696 hypothetical protein
* * ÷ NC_002947 4219928 4219941 14 2 [1] [1] 2 PP_3696 hypothetical protein
* * ÷ NC_002947 4222850 4222961 112 2 [1] [1] 2 PP_3698 hypothetical protein
* * ÷ NC_002947 4228253 4228313 61 2 [1] [0] 3 PP_3703 hypothetical protein
* * ÷ NC_002947 4230175 4230363 189 2 [1] [1] 2 PP_3705 membrane protein
* * ÷ NC_002947 4230457 4230514 58 2 [1] [1] 2 PP_3705 membrane protein
* * ÷ NC_002947 4232279 4232367 89 3 [0] [1] 2 PP_3706 hypothetical protein
* * ÷ NC_002947 4234832 4234856 25 2 [1] [1] 2 PP_3707 hypothetical protein
* * ÷ NC_002947 4245146 4245149 4 2 [0] [0] 3 PP_3717 LuxR family transcriptional regulator
* * ÷ NC_002947 4305575 4305639 65 3 [1] [1] 2 [PP_3773] [PP_3773]
* * ÷ NC_002947 4305979 4306107 129 2 [0] [1] 2 PP_3774 hypothetical protein
* * ÷ NC_002947 4310248 4310285 38 2 [1] [1] 2 PP_3777 hypothetical protein
* * ÷ NC_002947 4314096 4314130 35 2 [0] [0] 2 PP_3781 oxygen‑independent coproporphyrinogen III oxidase family protein
* * ÷ NC_002947 4315308 4315561 254 2 [1] [1] 2 syrB syringomycin biosynthesis protein 2
* * ÷ NC_002947 4316995 4317131 137 2 [1] [1] 2 PP_3784 hypothetical protein
* * ÷ NC_002947 4317175 4317286 112 2 [1] [1] 2 PP_3784 hypothetical protein
* * ÷ NC_002947 4319124 4319156 33 2 [1] [1] 2 aspC aminotransferase
* * ÷ NC_002947 4322144 4322268 125 2 [1] [1] 4 PP_3788 non‑ribosomal peptide synthetase
* * ÷ NC_002947 4322691 4322775 85 2 [1] [1] 2 [PP_5628]–[PP_3789] [PP_5628],[PP_3789]
* * ÷ NC_002947 4325770 4325781 12 2 [1] [1] 2 PP_3791/PP_5629 site‑specific recombinase/protease/amidase
* * ÷ NC_002947 4326397 4326693 297 2 [1] [1] 2 PP_5629 protease/amidase
* * ÷ NC_002947 4343477 4343487 11 2 [1] [1] 2 PP_3812/PP_5632 lipase/allo‑isoleucine metabolism protein
* * ÷ NC_002947 4345036 4345115 80 2 [1] [1] 2 ribAB‑II/PP_3814 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
* * ÷ NC_002947 4358162 4358191 30 2 [1] [0] 5 yrpB 2‑nitropropane dioxygenase
* * ÷ NC_002947 4364271 4364290 20 2 [1] [1] 2 PP_3834 hypothetical protein
* * ÷ NC_002947 4373812 4373874 63 2 [1] [1] 2 potF‑III putrescine‑binding protein
* * ÷ NC_002947 4375837 4375897 61 2 [1] [1] 2 PP_3847 LuxR family transcriptional regulator
* * ÷ NC_002947 4376618 4376713 96 2 [1] [1] 2 PP_5636/PP_3849 hypothetical protein/hemolysin‑type calcium‑binding protein
* * ÷ NC_002947 4383550 4383576 27 3 [1] [1] 2 PP_3854 lysozyme
* * ÷ NC_002947 4385162 4385334 173 2 [1] [1] 2 PP_3856 hypothetical protein
* * ÷ NC_002947 4386140 4386225 86 2 [1] [0] 2 PP_3857 hypothetical protein
* * ÷ NC_002947 4386581 4386766 186 2 [1] [1] 2 PP_3857 hypothetical protein
* * ÷ NC_002947 4407721 4407838 118 2 [1] [1] 3 PP_3881 terminase large subunit
* * ÷ NC_002947 4415600 4415646 47 2 [1] [1] 3 PP_3894 replication protein O
* * ÷ NC_002947 4417660 4417927 268 2 [1] [1] 2 [PP_3897]–[PP_3898] [PP_3897],[PP_3898]
* * ÷ NC_002947 4427350 4427481 132 2 [1] [1] 2 PP_3913 hypothetical protein
* * ÷ NC_002947 4468842 4468927 86 3 [1] [1] 2 PP_3956 hypothetical protein
* * ÷ NC_002947 4477982 4478062 81 2 [1] [1] 2 PP_3962/PP_3963 hypothetical protein/hypothetical protein
* * ÷ NC_002947 4480749 4480815 67 2 [1] [1] 2 PP_3965 transposase
* * ÷ NC_002947 4482106 4482159 54 3 [1] [0] 2 PP_3968 sensor histidine kinase
* * ÷ NC_002947 4482296 4482335 40 2 [0] [0] 2 PP_3968 sensor histidine kinase
* * ÷ NC_002947 4482581 4482581 1 2 [0] [0] 2 PP_3968 sensor histidine kinase
* * ÷ NC_002947 4483469 4483492 24 2 [1] [1] 2 PP_3969 two‑component system response regulator
* * ÷ NC_002947 4487299 4487407 109 2 [1] [1] 2 PP_3974 LysR family transcriptional regulator
* * ÷ NC_002947 4487533 4487547 15 2 [1] [1] 2 PP_3974 LysR family transcriptional regulator
* * ÷ NC_002947 4491403–4493663 4493724 62–2322 2 [1] [1] 2 [PP_3979]–PP_3981 [PP_3979],PP_3980,PP_3981
* * ÷ NC_002947 4494706 4495082 377 2 [1] [1] 2 PP_3982 hypothetical protein
* * ÷ NC_002947 4496439 4496476 38 2 [1] [1] 6 PP_3982 hypothetical protein
* * ÷ NC_002947 4507117 4507268 152 2 [1] [1] 2 [yccA] [yccA]
* * ÷ NC_002947 4525251 4525493 243 2 [1] [1] 2 [cspD]–[icd] [cspD],[icd]
* * ÷ NC_002947 4535003 4535063 61 2 [0] [1] 2 PP_4018/topB acetyltransferase/DNA topoisomerase III
* * ÷ NC_002947 4543976 4544042 67 2 [1] [1] 2 PP_4027 hypothetical protein
* * ÷ NC_002947 4545939 4546023 85 2 [1] [1] 2 PP_4030 enoyl‑CoA hydratase/isomerase family protein
* * ÷ NC_002947 4546755 4546789 35 2 [1] [1] 3 nhaB Na(+)/H(+) antiporter NhaB
* * ÷ NC_002947 4547894 4547913 20 2 [1] [1] 2 nhaB/PP_4032 Na(+)/H(+) antiporter NhaB/lipoprotein Blc
* * ÷ NC_002947 4556967 4557017 51 6 [1] [0] 2 pydA/rutR NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
* * ÷ NC_002947 4579232 4579330 99 2 [1] [1] 5 glgX glycogen debranching enzyme
* * ÷ NC_002947 4584071 4584098 28 2 [0] [1] 2 glgB 1,4‑alpha‑glucan branching enzyme
* * ÷ NC_002947 4591043 4591056 14 2 [1] [1] 2 PP_4061/PP_4063 hypothetical protein/long‑chain fatty acid‑‑CoA ligase
* * ÷ NC_002947 4626603 4626737 135 2 [1] [1] 2 PP_5654/PP_4091 phosphotriesterase/transposase
* * ÷ NC_002947 4630659 4630800 142 2 [1] [1] 2 PP_5654/PP_4091 phosphotriesterase/transposase
* * ÷ NC_002947 4631341 4631446–4631412 72–106 3 [1] [1] 2 PP_4091 transposase
* * ÷ NC_002947 4631583–4631898 4632178–4632030 133–596 2 [1] [0] 2 PP_4091 transposase
* * ÷ NC_002947 4639368 4639425 58 2 [1] [1] 2 uvrC UvrABC system protein C
* * ÷ NC_002947 4640372 4640390 19 3 [0] [1] 2 uvrY BarA/UvrY two‑componenent system response regulator
* * ÷ NC_002947 4644424 4644622 199 2 [1] [1] 2 PP_4104 glutathione S‑transferase family protein
* * ÷ NC_002947 4645973 4646005 33 2 [1] [1] 2 gabP‑IV gamma‑aminobutyrate permease
* * ÷ NC_002947 4649338 4649386 49 2 [0] [1] 2 [PP_4108]–[PP_4109] [PP_4108],[PP_4109]
* * ÷ NC_002947 4654278 4654288 11 2 [0] [1] 2 PP_4113 hypothetical protein
* * ÷ NC_002947 4655367 4655379 13 2 [1] [1] 2 PP_4113 hypothetical protein
* * ÷ NC_002947 4678104 4678122 19 2 [1] [0] 2 PP_4136/PP_4137 LuxR family transcriptional regulator/outer membrane siderophore receptor
* * ÷ NC_002947 4678534 4678568 35 2 [1] [0] 2 PP_4137 outer membrane siderophore receptor
* * ÷ NC_002947 4680270 4680402 133 2 [1] [1] 3 [PP_4137]–[chrR] [PP_4137],[chrR]
* * ÷ NC_002947 4681004 4681099 96 2 [1] [1] 2 chrR/PP_4139 chromate reductase/hypothetical protein
* * ÷ NC_002947 4691547 4691578 32 3 [1] [1] 2 yejA microcin C ABC transporter substrate‑binding protein
* * ÷ NC_002947 4693467 4693515 49 2 [1] [0] 2 PP_4149 ABC transporter permease
* * ÷ NC_002947 4723774 4723786 13 2 [1] [0] 2 [PP_4176] [PP_4176]
* * ÷ NC_002947 4726530 4726699 170 2 [0] [1] 2 [PP_4178]–[htpG] [PP_4178],[htpG]
* * ÷ NC_002947 4727244 4727251 8 2 [1] [1] 2 htpG chaperone protein HtpG
* * ÷ NC_002947 4728287 4728339 53 2 [1] [1] 2 htpG chaperone protein HtpG
* * ÷ NC_002947 4732197 4732292 96 2 [1] [1] 3 brnQ branched‑chain amino acid transporter
* * ÷ NC_002947 4734068 4734142 75 3 [1] [1] 2 sucC bifunctional succinyl‑CoA synthetase subunit beta/glutaryl‑CoA synthetase subunit beta
* * ÷ NC_002947 4744396 4744427 32 2 [1] [0] 3 sdhC/gltA succinate dehydrogenase membrane b‑556 subunit/citrate synthase
* * ÷ NC_002947 4745833 4745920 88 2 [0] [1] 2 gltA/yeiW citrate synthase/putative oxidoreductase
* * ÷ NC_002947 4745989 4746064 76 2 [1] [0] 2 gltA/yeiW citrate synthase/putative oxidoreductase
* * ÷ NC_002947 4746183 4746265 83 2 [0] [1] 2 gltA/yeiW citrate synthase/putative oxidoreductase
* * ÷ NC_002947 4801611 4801663 53 3 [1] [1] 2 [PP_4224] [PP_4224]
* * ÷ NC_002947 4844601 4844666 66 2 [1] [1] 2 [PP_4254]–[ccoN‑II] [PP_4254],[ccoN‑II]
* * ÷ NC_002947 4847864 4847916 53 2 [0] [1] 2 ccoP‑II/PP_4259 cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
* * ÷ NC_002947 4850119 4850190 72 2 [1] [1] 2 PP_4260/PP_4261 hypothetical protein/cation‑transporting P‑type ATPase
* * ÷ NC_002947 4857448 4857479 32 20 [0] [0] 2 recR/ybaB recombination protein RecR/nucleoid‑associated broad specificity regulator
* * ÷ NC_002947 4875649 4875692 44 2 [1] [1] 2 xdhB/xdhC xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
* * ÷ NC_002947 4894627 4894678 52 4 [0] [1] 2 hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
* * ÷ NC_002947 4901360 4901418 59 2 [1] [1] 4 [PP_4304] [PP_4304]
* * ÷ NC_002947 4907853 4907866 14 2 [1] [0] 3 PP_4310/PP_4311 hydantoin racemase/D‑amino acid dehydrogenase small subunit
* * ÷ NC_002947 4942563 4942746 184 2 [1] [1] 2 [PP_4345]–[ddlA] [PP_4345],[ddlA]
* * ÷ NC_002947 4947268 4947323 56 2 [1] [1] 2 PP_4349 hypothetical protein
* * ÷ NC_002947 4955930 4956010 81 2 [1] [1] 2 [fliK] [fliK]
* * ÷ NC_002947 4970969 4971061 93 2 [1] [1] 2 fliS flagellar chaperone
* * ÷ NC_002947 4971582 4971689 108 2 [1] [1] 2 fliD flagellar filament capping protein
* * ÷ NC_002947 4972932 4973014 83 2 [1] [1] 2 PP_4377 flagellin FlaG
* * ÷ NC_002947 4974807 4974841 35 2 [1] [1] 3 fliC flagellin
* * ÷ NC_002947 4975121 4975152 32 2 [1] [1] 2 fliC flagellin
* * ÷ NC_002947 4975454 4975755 302 2 [1] [1] 2 [PP_4379] [PP_4379]
* * ÷ NC_002947 4975927 4976011 85 2 [1] [0] 2 PP_4379 3‑oxoacyl‑ACP synthase
* * ÷ NC_002947 4976416 4976570 155 3 [1] [1] 3 [PP_4379] [PP_4379]
* * ÷ NC_002947 4977026 4977088 63 2 [1] [0] 2 flgL flagellar hook‑associated protein FlgL
* * ÷ NC_002947 4977426 4977484 59 3 [1] [1] 2 flgL flagellar hook‑associated protein FlgL
* * ÷ NC_002947 4985211 4985302 92 2 [1] [1] 2 flgF/PP_4387 flagellar basal‑body rod protein FlgF/hypothetical protein
* * ÷ NC_002947 4986635 4986758 124 3 [1] [1] 2 flgE flagellar hook protein FlgE
* * ÷ NC_002947 4987995 4988023 29 3 [0] [1] 4 flgC flagellar basal‑body rod protein FlgC
* * ÷ NC_002947 4988814 4988933 120 2 [1] [1] 2 [cheR] [cheR]
* * ÷ NC_002947 5005916 5006001 86 2 [1] [1] 2 PP_4407/PP_4409 gamma‑aminobutyrate transporter/site‑specific recombinase
* * ÷ NC_002947 5015816 5015864 49 3 [1] [1] 2 PP_4415 hypothetical protein
* * ÷ NC_002947 5026259 5026530 272 2 [1] [1] 2 PP_4425 amino acid ABC transporter ATP‑binding protein
* * ÷ NC_002947 5033355 5033420 66 2 [0] [1] 2 PP_4432 Xaa‑Pro aminopeptidase
* * ÷ NC_002947 5036811 5036885 75 2 [1] [1] 2 dadA‑I D‑amino acid dehydrogenase small subunit
* * ÷ NC_002947 5037160 5037293 134 2 [1] [1] 2 dadA‑I D‑amino acid dehydrogenase small subunit
* * ÷ NC_002947 5040565 5040587 23 2 [1] [1] 2 PP_4439/PP_4441 transposase/transposase
* * ÷ NC_002947 5045357 5045403 47 2 [1] [1] 2 PP_4446 group II intron‑encoding maturase
* * ÷ NC_002947 5049070 5049074 5 3 [1] [0] 3 PP_4448 hypothetical protein
* * ÷ NC_002947 5050855 5050901 47 2 [0] [1] 2 PP_5682 hypothetical protein
* * ÷ NC_002947 5052037 5052255 219 2 [1] [1] 2 PP_5683/PP_5684 hypothetical protein/hypothetical protein
* * ÷ NC_002947 5059439 5059522 84 2 [1] [1] 3 [gsiA]–[PP_4454] [gsiA],[PP_4454]
* * ÷ NC_002947 5060253 5060369 117 2 [1] [1] 3 PP_4454 opine ABC transporter permease
* * ÷ NC_002947 5061313 5061410 98 2 [1] [1] 2 [gsiC] [gsiC]
* * ÷ NC_002947 5061511 5061648 138 2 [1] [1] 2 ooxA opine oxidase subunit A
* * ÷ NC_002947 5064450 5064525 76 2 [1] [1] 2 PP_4458 opine ABC transporter substrate‑binding protein
* * ÷ NC_002947 5066153 5066264 112 2 [1] [1] 2 PP_4458/PP_4459 opine ABC transporter substrate‑binding protein/transposase
* * ÷ NC_002947 5071931 5071979 49 2 [1] [1] 2 PP_4464 LysR family transcriptional regulator
* * ÷ NC_002947 5077589 5077635 47 2 [1] [1] 2 PP_5689 hypothetical protein
* * ÷ NC_002947 5082044 5082129 86 3 [1] [1] 2 PP_4470 Arc domain‑containing transcriptional regulator
* * ÷ NC_002947 5085213 5085273 61 2 [1] [1] 2 csrA/lysC carbon storage regulator/aspartokinase
* * ÷ NC_002947 5102211 5102328 118 3 [1] [1] 2 [acsA‑I] [acsA‑I]
* * ÷ NC_002947 5149271 5149349 79 2 [1] [1] 2 [PP_4528] [PP_4528]
* * ÷ NC_002947 5153201 5153317 117 2 [1] [1] 3 [PP_5695] [PP_5695]
* * ÷ NC_002947 5155434 5155476 43 2 [1] [1] 3 PP_4535 hypothetical protein
* * ÷ NC_002947 5164783 5164795 13 2 [1] [1] 2 PP_4542/PP_4543 ABC transporter ATP‑binding protein/permease/hypothetical protein
* * ÷ NC_002947 5167586 5167631 46 2 [0] [1] 2 PP_4544/PP_4545 hypothetical protein/beta‑ketodecanoyl‑ACP synthase
* * ÷ NC_002947 5178241 5178303 63 2 [1] [1] 3 [fadD‑II] [fadD‑II]
* * ÷ NC_002947 5185610 5185697 88 2 [1] [1] 2 def‑II peptide deformylase
* * ÷ NC_002947 5189761 5189821 61 2 [1] [0] 2 aceK isocitrate dehydrogenase kinase/phosphatase
* * ÷ NC_002947 5194682 5194710 29 2 [1] [0] 2 PP_4570 hypothetical protein
* * ÷ NC_002947 5196906 5197097 192 2 [1] [1] 2 PP_4572 hypothetical protein
* * ÷ NC_002947 5197751 5197781 31 2 [0] [1] 2 PP_4572/PP_4573 hypothetical protein/AAA family ATPase
* * ÷ NC_002947 5199874 5199910 37 2 [1] [1] 3 [PP_4575] [PP_4575]
* * ÷ NC_002947 5215238 5215269 32 3 [1] [1] 2 rnd/PP_4592 ribonuclease D/metal dependent hydrolase
* * ÷ NC_002947 5253076 5253123 48 2 [1] [1] 2 PP_4623 hypothetical protein
* * ÷ NC_002947 5253805 5253859 55 3 [1] [1] 3 PP_4623/PP_4624 hypothetical protein/alpha/beta family hydrolase
* * ÷ NC_002947 5260340 5260358 19 2 [0] [0] 2 PP_4631 hypothetical protein
* * ÷ NC_002947 5261855 5261887 33 2 [1] [1] 2 PP_5703/PP_4634 type III effector protein HopJ/alpha/beta family hydrolase
* * ÷ NC_002947 5265507 5265528 22 2 [1] [1] 2 yqeF acetyl‑CoA acetyltransferase
* * ÷ NC_002947 5268985 5269043 59 2 [1] [1] 2 zinU P‑loop guanosine triphosphatase‑dependent zinc chaperone
* * ÷ NC_002947 5272029 5272065 37 3 [1] [1] 3 PP_4642 cyclic diguanosine monophosphate‑binding protein
* * ÷ NC_002947 5274627 5274751 125 2 [1] [1] 2 radA DNA repair enzyme
* * ÷ NC_002947 5285863 5285951 89 2 [1] [1] 2 [trmA] [trmA]
* * ÷ NC_002947 5293381 5293458 78 3 [1] [1] 2 PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B
* * ÷ NC_002947 5349406 5349524 119 2 [1] [0] 2 [pgi‑II] [pgi‑II]
* * ÷ NC_002947 5367691 5367751 61 2 [1] [1] 2 glmM phosphoglucosamine mutase
* * ÷ NC_002947 5381383 5381441 59 2 [1] [1] 2 dnaK chaperone protein DnaK
* * ÷ NC_002947 5386541 5386674 134 3 [1] [1] 2 PP_4732 hypothetical protein
* * ÷ NC_002947 5387447 5387462 16 2 [0] [1] 2 smpB/pdhR SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
* * ÷ NC_002947 5399109 5399129 21 2 [0] [1] 2 hsdR type I restriction modification system endonuclease
* * ÷ NC_002947 5400662 5400687 26 2 [0] [1] 2 hsdM type I restriction modification system methylase
* * ÷ NC_002947 5402576 5402588 13 3 [1] [0] 2 hsdS type I restriction modification system specificity protein
* * ÷ NC_002947 5404282 5404395 114 2 [0] [1] 2 PP_4743 hypothetical protein
* * ÷ NC_002947 5416474 5416763 290 3 [1] [1] 2 [PP_4754] [PP_4754]
* * ÷ NC_002947 5420171 5420193 23 2 [0] [1] 2 gabP‑V gamma‑aminobutyrate permease
* * ÷ NC_002947 5444307 5444319 13 2 [1] [1] 2 rluE 23S rRNA pseudouridine(2457) synthase
* * ÷ NC_002947 5464529 5464641 113 2 [1] [1] 2 [PP_4795]–[holA] [PP_4795],[holA]
* * ÷ NC_002947 5471487 5471656 170 2 [1] [1] 2 [dacA] [dacA]
* * ÷ NC_002947 5472350 5472407 58 2 [1] [1] 2 rlpA RlpA‑like lipoprotein
* * ÷ NC_002947 5474229 5474353 125 2 [1] [1] 2 mrdB murein transpeptidase factor
* * ÷ NC_002947 5490056 5490214 159 3 [1] [1] 2 [purH] [purH]
* * ÷ NC_002947 5490850 5490855 6 2 [0] [0] 2 purD phosphoribosylamine‑‑glycine ligase
* * ÷ NC_002947 5491186 5491199 14 2 [1] [1] 2 purD phosphoribosylamine‑‑glycine ligase
* * ÷ NC_002947 5494785 5494790 6 2 [1] [1] 3 PP_4825 MarC family membrane protein
* * ÷ NC_002947 5511536 5511595 60 2 [1] [0] 2 [PP_4839] [PP_4839]
* * ÷ NC_002947 5542024 5542158 135 3 [1] [1] 2 [PP_4870] [PP_4870]
* * ÷ NC_002947 5543596 5543666 71 2 [1] [1] 3 [PP_4872] [PP_4872]
* * ÷ NC_002947 5546171 5546279 109 2 [1] [0] 3 PP_4872/dnaB hypothetical protein/replicative DNA helicase
* * ÷ NC_002947 5551122 5551151 30 2 [1] [1] 2 rlmB 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
* * ÷ NC_002947 5551608 5551690 83 2 [1] [1] 2 rnr exoribonuclease R
* * ÷ NC_002947 5599131 5599180 50 3 [1] [1] 2 PP_4921/thiC NCS1 family transporter/phosphomethylpyrimidine synthase
* * ÷ NC_002947 5605350 5605443 94 2 [1] [1] 2 PP_4924 subtilase family serine protease
* * ÷ NC_002947 5605580 5605667 88 2 [1] [1] 2 PP_4924 subtilase family serine protease
* * ÷ NC_002947 5619149 5619183 35 2 [0] [1] 2 hldE bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
* * ÷ NC_002947 5633411 5633429 19 2 [0] [1] 2 rlmJ 23S rRNA (adenine(2030)‑N(6))‑methyltransferase
* * ÷ NC_002947 5654316 5654383 68 2 [0] [1] 2 PP_4959 diguanylate cyclase
* * ÷ NC_002947 5657954 5658032 79 3 [1] [1] 2 PP_4961/PP_4962 lipoprotein/hypothetical protein
* * ÷ NC_002947 5660603 5660683 81 2 [0] [1] 2 epd/tktA D‑erythrose 4‑phosphate dehydrogenase/transketolase A
* * ÷ NC_002947 5686438 5686445 8 2 [0] [1] 2 PP_4986/PP_4987 hemolysin III family channel protein/putative Chemotaxis protein
* * ÷ NC_002947 5712668 5712744 77 2 [1] [1] 5 PP_5009 hypothetical protein
* * ÷ NC_002947 5721254 5721318 65 2 [0] [1] 2 tatC‑II Sec‑independent protein translocase protein
* * ÷ NC_002947 5747978 5748015 38 2 [1] [1] 2 fbp class 1 fructose‑1,6‑bisphosphatase
* * ÷ NC_002947 5750805 5750864 60 2 [1] [1] 2 glgP glycogen phosphorylase
* * ÷ NC_002947 5751465 5751542 78 3 [0] [0] 2 PP_5042/PP_5043 hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
* * ÷ NC_002947 5753418 5753490 73 3 [1] [1] 2 typA ribosome associated GTPase
* * ÷ NC_002947 5755386 5755506 121 2 [1] [1] 2 thiI tRNA sulfurtransferase
* * ÷ NC_002947 5756023 5756091 69 2 [1] [1] 2 thiI tRNA sulfurtransferase
* * ÷ NC_002947 5756220 5756397 178 2 [1] [1] 2 thiI tRNA sulfurtransferase
* * ÷ NC_002947 5756677 5756819 143 2 [0] [1] 2 thiI/glnA tRNA sulfurtransferase/glutamine synthetase
* * ÷ NC_002947 5757793 5757848 56 4 [0] [1] 2 glnA glutamine synthetase
* * ÷ NC_002947 5758841 5758890 50 2 [1] [1] 2 glnL two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
* * ÷ NC_002947 5773027 5773036 10 2 [0] [1] 3 PP_5060 hypothetical protein
* * ÷ NC_002947 5779859 5779936 78 2 [1] [1] 2 betB NAD‑dependent betaine aldehyde dehydrogenase
* * ÷ NC_002947 5791397 5791533 137 2 [1] [1] 2 [PP_5068] [PP_5068]
* * ÷ NC_002947 5880897 5880971 75 2 [1] [1] 2 ilvA‑II threonine deaminase
* * ÷ NC_002947 5882013 5882039 27 2 [0] [1] 2 rpiA/PP_5151 ribose‑5‑phosphate isomerase A/hypothetical protein
* * ÷ NC_002947 5884114 5884124 11 2 [1] [1] 4 PP_5152/ycgM hypothetical protein/isomerase/hydrolase
* * ÷ NC_002947 5908144 5908210 67 2 [0] [1] 3 PP_5175/PP_5176 HlyD family secretion protein/hypothetical protein
* * ÷ NC_002947 5909524 5909615 92 2 [1] [1] 3 spuH spermidine/putrescine ABC transporter permease
* * ÷ NC_002947 5910483 5910564 82 3 [0] [1] 2 spuG spermidine/putrescine ABC transporter permease
* * ÷ NC_002947 5940785 5940803 19 2 [1] [0] 2 PP_5204 hypothetical protein
* * ÷ NC_002947 5989445 5989453 9 2 [0] [0] 2 PP_5242/ycaC‑II GAF domain‑containing sensor histidine kinase/putative hydrolase
* * ÷ NC_002947 6002196 6002217 22 2 [0] [1] 2 PP_5252/PP_5253 hypothetical protein/arylesterase
* * ÷ NC_002947 6010915 6010953 39 2 [1] [1] 2 ydcJ metalloprotein
* * ÷ NC_002947 6011572 6011591 20 3 [1] [0] 6 ydcJ/PP_5261 metalloprotein/LysR family transcriptional regulator
* * ÷ NC_002947 6014146 6014158 13 6 [1] [0] 2 norM/PP_5263 multidrug resistance protein NorM/GGDEF domain‑containing protein
* * ÷ NC_002947 6018847 6018868 22 5 [0] [1] 4 xpt/PP_5266 xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
* * ÷ NC_002947 6019231 6019351 121 2 [1] [1] 2 PP_5266 acetyl‑CoA hydrolase family protein
* * ÷ NC_002947 6032854 6032924 71 2 [1] [1] 2 [PP_5277] [PP_5277]
* * ÷ NC_002947 6037751 6037866 116 2 [1] [1] 2 dppA‑IV/PP_5284 dipeptide transport protein/hypothetical protein
* * ÷ NC_002947 6041196 6041419 224 2 [1] [0] 2 algC phosphomannomutase/phosphoglucomutase
* * ÷ NC_002947 6042054 6042097 44 2 [1] [1] 2 argB acetylglutamate kinase
* * ÷ NC_002947 6050172 6050226 55 2 [1] [1] 2 PP_5297 amino acid transporter
* * ÷ NC_002947 6087374 6087459 86 2 [0] [1] 2 purK 5‑(carboxyamino)imidazole ribonucleotide synthase
* * ÷ NC_002947 6099118 6099253 136 3 [1] [1] 2 pycB pyruvate carboxylase subunit B
* * ÷ NC_002947 6101284 6101337 54 2 [1] [1] 2 pycA pyruvate carboxylase subunit A
* * ÷ NC_002947 6103377 6103405 29 2 [0] [1] 2 PP_5350 RpiR family transcriptional regulator
* * ÷ NC_002947 6118302 6118336 35 2 [1] [1] 3 clsA cardiolipin synthase
* * ÷ NC_002947 6119271 6119358 88 2 [1] [1] 2 [clsA] [clsA]
* * ÷ NC_002947 6125592 6125605 14 2 [0] [1] 2 PP_5370 oxidoreductase‑like protein
* * ÷ NC_002947 6129129 6129152 24 2 [0] [1] 2 PP_5373 Rieske 2Fe‑2S family protein
* * ÷ NC_002947 6129708 6129875 168 2 [1] [1] 2 [PP_5373] [PP_5373]
* * ÷ NC_002947 6130146 6130245 100 2 [1] [1] 2 [PP_5374] [PP_5374]
* * ÷ NC_002947 6130452 6130512 61 2 [1] [1] 2 PP_5374 choline/carnitine/betaine transporter family protein
* * ÷ NC_002947 6130870 6130934 65 2 [1] [1] 3 PP_5374 choline/carnitine/betaine transporter family protein
* * ÷ NC_002947 6132529 6132604 76 2 [0] [1] 3 PP_5375 LysR family transcriptional regulator
* * ÷ NC_002947 6133860 6134031 172 2 [1] [1] 2 PP_5376 hypothetical protein
* * ÷ NC_002947 6149777 6149942 166 2 [1] [1] 2 [PP_5389] [PP_5389]
* * ÷ NC_002947 6152058 6152174 117 2 [1] [1] 2 PP_5392 WD40/YVTN repeat‑containing protein
* * ÷ NC_002947 6157195 6157234 40 2 [1] [1] 3 PP_5737 hypothetical protein
* * ÷ NC_002947 6161297 6161398 102 2 [1] [0] 2 PP_5399/PP_5400 hypothetical protein/hypothetical protein
* * ÷ NC_002947 6163556 6163824 269 2 [1] [1] 3 [PP_5739] [PP_5739]
* * ÷ NC_002947 6164529 6164733 205 3 [1] [1] 2 [PP_5402] [PP_5402]
* * ÷ NC_002947 6172837 6172922 86 2 [1] [1] 2 PP_5407 TnsD‑like transposition protein
* * ÷ NC_002947 6173059 6173085 27 2 [1] [0] 2 PP_5407 TnsD‑like transposition protein
* * ÷ NC_002947 6182489 6182702 214 2 [1] [1] 2 [atpG]–[atpA] [atpG],[atpA]
* * ÷ NC_002947 6183902 6184006 105 3 [1] [1] 2 atpA ATP synthase subunit alpha
* * ÷ NC_002947 6184337 6184359 23 2 [1] [1] 2 atpH ATP synthase subunit delta
* * ÷ NC_002947 6184740 6184795 56 2 [1] [1] 2 atpF ATP synthase subunit b

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1015841 =0 (0.000)9 (0.650) 9/264 0.3 100% intergenic (‑68/‑700) SBRG_Ecoli_galE/prfC SBRG_Ecoli_galE/peptide chain release factor 3
?NC_002947 4541196 = NA (NA)intergenic (+730/‑85) PP_4022/PP_4024 hypothetical protein/transposase
* ? NC_002947 = 10158480 (0.000)11 (0.800) 9/264 0.3 100% intergenic (‑75/‑693) SBRG_Ecoli_galE/prfC SBRG_Ecoli_galE/peptide chain release factor 3
?NC_002947 = 4543236 NA (NA)intergenic (+45/‑275) PP_4025/PP_4027 transposase/hypothetical protein
* ? NC_002947 1444956 =NA (NA)4 (0.300) 4/254 0.7 100% intergenic (‑331/‑328) yveA/PP_1260 aspartate‑proton symporter/transposase
?NC_002947 = 1849442 0 (0.000)coding (343/2754 nt) gacS sensor protein GacS
* ? NC_002947 1849440 =0 (0.000)11 (0.820) 9/258 0.3 100% coding (345/2754 nt) gacS sensor protein GacS
?NC_002947 2942681 = NA (NA)intergenic (+46/+37) PP_2569/PP_2570 MHS family metabolite MFS transporter/transposase
* ? NC_002947 3976787 =NA (NA)11 (0.920) 9/228 0.2 100% intergenic (+177/‑203) PP_3501/PP_3502 transposase/transposase
?NC_002947 4578248 = 0 (0.000)intergenic (+63/‑74) PP_4054/glgX hypothetical protein/glycogen debranching enzyme
* ? NC_002947 = 45782490 (0.000)20 (1.530) 17/250 0.1 100% intergenic (+64/‑73) PP_4054/glgX hypothetical protein/glycogen debranching enzyme
?NC_002947 = 5763126 NA (NA)intergenic (+145/+373) PP_5050/PP_5051 transposase/hypothetical protein
* ? NC_002947 = 48945892 (0.140)3 (0.270) 3/210 0.8 79.0% intergenic (+41/‑112) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
?NC_002947 = 4894626 0 (0.000)intergenic (+78/‑75) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase