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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
RA | 1,484,303 | T→G | V125G (GTC→GGC) | yhdX → | amino acid ABC transporter permease |
RA | 3,823,901 | +T | coding (1248/1293 nt) | kguT ← | 2‑ketogluconate transporter, putative |
RA | 3,824,415 | A→G | I245T (ATC→ACC) | kguT ← | 2‑ketogluconate transporter, putative |
MC JC | 3,827,335 | Δ51 bp | coding (626‑676/1020 nt) | ptxS ← | 2‑ketogluconate utilization repressor |
RA | 4,743,195 | +C | intergenic (+464/+288) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,743,197 | A→G | intergenic (+466/+286) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,743,199 | C→T | intergenic (+468/+284) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,743,202 | C→T | intergenic (+471/+281) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,743,205 | C→G | intergenic (+474/+278) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,743,207 | 2 bp→CT | intergenic (+476/+275) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,743,221 | C→T | intergenic (+490/+262) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,743,223 | A→C | intergenic (+492/+260) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,743,226 | 2 bp→GC | intergenic (+495/+256) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
Unassigned missing coverage evidence | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_002947 | 97567 | 97627 | 61 | 3 [1] | [1] 3 | [PP_0090]–[PP_0091] | [PP_0090],[PP_0091] |
* | * | ÷ | NC_002947 | 148231 | 148249 | 19 | 3 [1] | [1] 2 | PP_0140 | hypothetical protein |
* | * | ÷ | NC_002947 | 171379–172965 | 176295–172970 | 6–4917 | 2 [1] | [1] 2 | PP_16SA–[PP_5SA] | PP_16SA,PP_23SA,[PP_5SA] |
* | * | ÷ | NC_002947 | 176665–178395 | 181690–178400 | 6–5026 | 2 [0] | [1] 2 | PP_16SB–[PP_r01] | PP_16SB,PP_23SB,[PP_r01] |
* | * | ÷ | NC_002947 | 220535 | 220629 | 95 | 2 [1] | [1] 3 | [PP_0168] | [PP_0168] |
* | * | ÷ | NC_002947 | 284564 | 284608 | 45 | 2 [1] | [1] 2 | betT‑II/atsK | choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
* | * | ÷ | NC_002947 | 336208 | 336263 | 56 | 2 [1] | [0] 2 | PP_0278/PP_0279 | hypothetical protein/hypothetical protein |
* | * | ÷ | NC_002947 | 353084 | 353103 | 20 | 2 [1] | [1] 2 | hisF/cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
* | * | ÷ | NC_002947 | 380856 | 380878 | 23 | 2 [1] | [1] 3 | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer |
* | * | ÷ | NC_002947 | 445117 | 445139 | 23 | 2 [0] | [1] 2 | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
* | * | ÷ | NC_002947 | 478322 | 478323 | 2 | 4 [0] | [0] 2 | PP_0393/cca | 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
* | * | ÷ | NC_002947 | 486362 | 486404 | 43 | 2 [1] | [1] 2 | apaG/rsmA | Co(2+)/Mg(2+) efflux protein/ribosomal RNA small subunit methyltransferase A |
* | * | ÷ | NC_002947 | 499201 | 499236 | 36 | 2 [1] | [0] 3 | uhpA/PP_0411 | two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein |
* | * | ÷ | NC_002947 | 524143 | 524224 | 82 | 3 [0] | [1] 2 | tyrS/PP_16SC | tyrosine‑‑tRNA ligase/16S ribosomal RNA |
* | * | ÷ | NC_002947 | 614283 | 614385 | 103 | 2 [0] | [1] 2 | [ispA] | [ispA] |
* | * | ÷ | NC_002947 | 668082 | 668095 | 14 | 4 [0] | [1] 4 | yfhM/PP_0571 | lipoprotein/membrane protein |
* | * | ÷ | NC_002947 | 681281 | 681320 | 40 | 2 [1] | [1] 2 | PP_0583/PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
* | * | ÷ | NC_002947 | 954714 | 954734 | 21 | 2 [1] | [1] 2 | cyoE | protoheme IX farnesyltransferase |
* | * | ÷ | NC_002947 | 975193 | 975228 | 36 | 2 [0] | [1] 3 | ycfJ/suhB | flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase |
* | * | ÷ | NC_002947 | 1114920 | 1114935 | 16 | 2 [0] | [0] 3 | rlmF/valS | ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase |
* | * | ÷ | NC_002947 | 1156335 | 1156387 | 53 | 3 [1] | [1] 2 | PP_1013/yihS | sensor histidine kinase/aldose‑ketose isomerase |
* | * | ÷ | NC_002947 | 1276104 | 1276134 | 31 | 2 [0] | [1] 2 | PP_5464 | hypothetical protein |
* | * | ÷ | NC_002947 | 1311729 | 1311784 | 56 | 3 [0] | [0] 3 | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA |
* | * | ÷ | NC_002947 | 1403565 | 1403610 | 46 | 2 [1] | [1] 2 | PP_1227/PP_1228 | membrane protein/methyl‑accepting chemotaxis transducer |
* | * | ÷ | NC_002947 | 1409117 | 1409133 | 17 | 2 [1] | [0] 2 | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
* | * | ÷ | NC_002947 | 1443099 | 1443162 | 64 | 2 [1] | [1] 3 | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
* | * | ÷ | NC_002947 | 1464203 | 1464219 | 17 | 2 [0] | [0] 3 | algX | alginate biosynthesis protein AlgX |
* | * | ÷ | NC_002947 | 1531833 | 1531873 | 41 | 2 [0] | [1] 2 | PP_1344 | hypothetical protein |
* | * | ÷ | NC_002947 | 1592617 | 1592688 | 72 | 2 [1] | [1] 5 | PP_1397 | hypothetical protein |
* | * | ÷ | NC_002947 | 1615727 | 1615755 | 29 | 2 [1] | [1] 2 | PP_1415 | membrane protein |
* | * | ÷ | NC_002947 | 1659895 | 1659913 | 19 | 2 [1] | [0] 2 | PP_1452/nudL | MutT/nudix family protein/NUDIX hydrolase |
* | * | ÷ | NC_002947 | 1676922 | 1676995 | 74 | 2 [0] | [1] 2 | thrC | threonine synthase |
* | * | ÷ | NC_002947 | 1704662 | 1704689 | 28 | 2 [1] | [0] 2 | [PP_1499] | [PP_1499] |
* | * | ÷ | NC_002947 | 1712094 | 1712227 | 134 | 2 [1] | [1] 2 | ppc/adk | phosphoenolpyruvate carboxylase/adenylate kinase |
* | * | ÷ | NC_002947 | 1780119 | 1780130 | 12 | 7 [0] | [1] 2 | PP_1587/dapC | NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase |
* | * | ÷ | NC_002947 | 1898696 | 1898746 | 51 | 2 [1] | [1] 2 | PP_t16/PP_t17 | tRNA‑Asp/tRNA‑Val |
* | * | ÷ | NC_002947 | 1921561 | 1921607 | 47 | 3 [1] | [0] 2 | [PP_1720] | [PP_1720] |
* | * | ÷ | NC_002947 | 1930384 | 1930491 | 108 | 2 [1] | [1] 3 | [apeB] | [apeB] |
* | * | ÷ | NC_002947 | 1947820 | 1947842 | 23 | 2 [1] | [0] 2 | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
* | * | ÷ | NC_002947 | 2040275 | 2040351 | 77 | 2 [0] | [1] 3 | [rffE] | [rffE] |
* | * | ÷ | NC_002947 | 2065075 | 2065162 | 88 | 2 [1] | [0] 2 | [PP_1838] | [PP_1838] |
* | * | ÷ | NC_002947 | 2101947 | 2101975 | 29 | 2 [1] | [1] 2 | PP_1875/PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
* | * | ÷ | NC_002947 | 2197504 | 2197524 | 21 | 3 [1] | [1] 2 | PP_1940 | methyl‑accepting chemotaxis transducer |
* | * | ÷ | NC_002947 | 2201479 | 2201636 | 158 | 2 [1] | [1] 2 | PP_1944 | aminomethyltransferase |
* | * | ÷ | NC_002947 | 2209727 | 2209830 | 104 | 2 [1] | [1] 2 | [PP_1951] | [PP_1951] |
* | * | ÷ | NC_002947 | 2214269 | 2214303 | 35 | 2 [1] | [1] 2 | PP_1955 | cytochrome P450 family protein |
* | * | ÷ | NC_002947 | 2243226 | 2243296 | 71 | 2 [1] | [1] 2 | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
* | * | ÷ | NC_002947 | 2273203 | 2273212 | 10 | 2 [1] | [1] 3 | PP_2002/PP_t31 | oxidoreductase/tRNA‑Val |
* | * | ÷ | NC_002947 | 2297780 | 2297859 | 80 | 2 [1] | [1] 2 | [PP_2023] | [PP_2023] |
* | * | ÷ | NC_002947 | 2476115 | 2476118 | 4 | 7 [0] | [0] 2 | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
* | * | ÷ | NC_002947 | 2617298 | 2617355 | 58 | 3 [1] | [1] 2 | PP_2287 | internal core protein |
* | * | ÷ | NC_002947 | 2666001 | 2666009 | 9 | 3 [0] | [1] 2 | prpC/acnA‑II | methylcitrate synthase/aconitate hydratase |
* | * | ÷ | NC_002947 | 2839131 | 2839156 | 26 | 2 [0] | [1] 2 | sad‑I/PP_2489 | NAD+‑dependent succinate semialdehyde dehydrogenase/xenobiotic reductase |
* | * | ÷ | NC_002947 | 3055090 | 3055199 | 110 | 5 [1] | [0] 2 | [PP_2664] | [PP_2664] |
* | * | ÷ | NC_002947 | 3056670 | 3056726 | 57 | 2 [1] | [1] 2 | PP_2666/PP_2667 | hypothetical protein/ABC transporter permease |
* | * | ÷ | NC_002947 | 3087817 | 3087836 | 20 | 2 [1] | [1] 2 | PP_2694 | aldehyde dehydrogenase family protein |
* | * | ÷ | NC_002947 | 3432137 | 3432155 | 19 | 2 [1] | [1] 2 | PP_3045 | ATP‑dependent protease ClpP |
* | * | ÷ | NC_002947 | 3518080 | 3518115 | 36 | 3 [1] | [1] 2 | PP_5576/PP_5578 | hypothetical protein/hypothetical protein |
* | * | ÷ | NC_002947 | 3579360 | 3579426 | 67 | 2 [1] | [1] 2 | [PP_3157] | [PP_3157] |
* | * | ÷ | NC_002947 | 3778329 | 3778374 | 46 | 2 [1] | [1] 2 | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
* | * | ÷ | NC_002947 | 3847647 | 3847715 | 69 | 3 [0] | [1] 3 | [PP_3395] | [PP_3395] |
* | * | ÷ | NC_002947 | 3890427 | 3890491 | 65 | 2 [1] | [1] 2 | PP_3431 | ThiJ/PfpI family protein |
* | * | ÷ | NC_002947 | 4152011 | 4152101 | 91 | 2 [1] | [1] 2 | PP_3654/PP_3655 | leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein |
* | * | ÷ | NC_002947 | 4210424 | 4210514 | 91 | 2 [1] | [1] 2 | PP_3692 | hypothetical protein |
* | * | ÷ | NC_002947 | 4311475 | 4311493 | 19 | 2 [0] | [1] 2 | PP_3781 | oxygen‑independent coproporphyrinogen III oxidase family protein |
* | * | ÷ | NC_002947 | 4340458 | 4340476 | 19 | 3 [1] | [1] 2 | PP_3812/PP_5632 | lipase/allo‑isoleucine metabolism protein |
* | * | ÷ | NC_002947 | 4342007 | 4342055 | 49 | 2 [1] | [1] 3 | ribAB‑II/PP_3814 | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein |
* | * | ÷ | NC_002947 | 4346259 | 4346303 | 45 | 2 [0] | [1] 3 | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein |
* | * | ÷ | NC_002947 | 4355138 | 4355164 | 27 | 2 [1] | [0] 4 | yrpB | 2‑nitropropane dioxygenase |
* | * | ÷ | NC_002947 | 4505724 | 4505764 | 41 | 3 [1] | [1] 2 | xanP/tusD | xanthine permease/sulfur transfer protein complex subunit TusD |
* | * | ÷ | NC_002947 | 4531976 | 4532021 | 46 | 2 [0] | [1] 2 | PP_4018/topB | acetyltransferase/DNA topoisomerase III |
* | * | ÷ | NC_002947 | 4553936 | 4553990 | 55 | 2 [1] | [0] 3 | pydA/rutR | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family |
* | * | ÷ | NC_002947 | 4588016 | 4588047 | 32 | 2 [1] | [1] 2 | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
* | * | ÷ | NC_002947 | 4677237 | 4677350 | 114 | 3 [1] | [1] 3 | [PP_4137] | [PP_4137] |
* | * | ÷ | NC_002947 | 4719244 | 4719358 | 115 | 2 [1] | [1] 2 | fabA | 3R‑3‑hydroxydecanoyl‑ACP dehydratase |
* | * | ÷ | NC_002947 | 4742755 | 4742827 | 73 | 2 [1] | [1] 2 | gltA/yeiW | citrate synthase/putative oxidoreductase |
* | * | ÷ | NC_002947 | 4798572 | 4798635 | 64 | 3 [0] | [1] 2 | [PP_4224] | [PP_4224] |
* | * | ÷ | NC_002947 | 4810147 | 4810182 | 36 | 12 [0] | [1] 2 | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
* | * | ÷ | NC_002947 | 4844852 | 4844881 | 30 | 3 [1] | [1] 2 | ccoP‑II/PP_4259 | cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein |
* | * | ÷ | NC_002947 | 4854421 | 4854444 | 24 | 7 [0] | [0] 2 | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator |
* | * | ÷ | NC_002947 | 4898392 | 4898413 | 22 | 2 [1] | [1] 2 | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
* | * | ÷ | NC_002947 | 4952909 | 4952965 | 57 | 2 [1] | [1] 2 | fliL/fliK | flagellar protein FliL/flagellar hook‑length control protein FliK |
* | * | ÷ | NC_002947 | 5020906 | 5020952 | 47 | 2 [1] | [1] 3 | gabD‑II/PP_4423 | succinate‑semialdehyde dehydrogenase/hypothetical protein |
* | * | ÷ | NC_002947 | 5052989 | 5053042 | 54 | 2 [1] | [1] 3 | [PP_5687] | [PP_5687] |
* | * | ÷ | NC_002947 | 5074475 | 5074490 | 16 | 2 [1] | [1] 2 | PP_5689 | hypothetical protein |
* | * | ÷ | NC_002947 | 5098216 | 5098277 | 62 | 2 [0] | [1] 2 | argT | lysine/arginine/ornithine ABC transporter substrate‑binding protein |
* | * | ÷ | NC_002947 | 5099218 | 5099219 | 2 | 2 [0] | [0] 2 | PP_mr66/acsA‑I | P6/acetyl‑CoA synthetase |
* | * | ÷ | NC_002947 | 5101510 | 5101551 | 42 | 2 [1] | [1] 2 | acsA‑I/PP_4488 | acetyl‑CoA synthetase/hypothetical protein |
* | * | ÷ | NC_002947 | 5164571 | 5164591 | 21 | 2 [0] | [1] 4 | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
* | * | ÷ | NC_002947 | 5175216 | 5175236 | 21 | 2 [0] | [1] 2 | fadD‑I/fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
* | * | ÷ | NC_002947 | 5194715 | 5194739 | 25 | 4 [1] | [1] 6 | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase |
* | * | ÷ | NC_002947 | 5201619 | 5201648 | 30 | 3 [0] | [1] 2 | PP_4579/PP_4580 | LysR family transcriptional regulator/hypothetical protein |
* | * | ÷ | NC_002947 | 5259830 | 5259862 | 33 | 2 [1] | [0] 2 | PP_4634/PP_4635 | alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase |
* | * | ÷ | NC_002947 | 5282915 | 5282934 | 20 | 2 [1] | [1] 4 | trmA/pcaG | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha |
* | * | ÷ | NC_002947 | 5290395 | 5290418 | 24 | 2 [0] | [1] 2 | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B |
* | * | ÷ | NC_002947 | 5301350 | 5301371 | 22 | 4 [1] | [0] 2 | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
* | * | ÷ | NC_002947 | 5384420 | 5384437 | 18 | 2 [0] | [0] 2 | smpB/pdhR | SsrA‑binding protein/DNA‑binding transcriptional regulator LldR |
* | * | ÷ | NC_002947 | 5487089 | 5487170 | 82 | 2 [1] | [1] 2 | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
* | * | ÷ | NC_002947 | 5538993 | 5539027 | 35 | 2 [1] | [1] 2 | [nadE] | [nadE] |
* | * | ÷ | NC_002947 | 5657576 | 5657626 | 51 | 2 [1] | [0] 3 | epd/tktA | D‑erythrose 4‑phosphate dehydrogenase/transketolase A |
* | * | ÷ | NC_002947 | 5673589 | 5673626 | 38 | 2 [1] | [1] 2 | PP_4978/PP_4979 | hypothetical protein/substrate‑binding protein |
* | * | ÷ | NC_002947 | 5700726 | 5700779 | 54 | 3 [1] | [1] 2 | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein |
* | * | ÷ | NC_002947 | 5742446 | 5742508 | 63 | 2 [0] | [1] 2 | [PP_5037] | [PP_5037] |
* | * | ÷ | NC_002947 | 5776676 | 5776694 | 19 | 2 [0] | [0] 2 | betB | NAD‑dependent betaine aldehyde dehydrogenase |
* | * | ÷ | NC_002947 | 5788462 | 5788496 | 35 | 2 [1] | [1] 2 | PP_5068/trxC | hypothetical protein/thioredoxin |
* | * | ÷ | NC_002947 | 5899715 | 5899788 | 74 | 2 [1] | [1] 2 | PP_5172/PP_5173 | hypothetical protein/RND family transporter |
* | * | ÷ | NC_002947 | 5905115 | 5905161 | 47 | 2 [1] | [1] 2 | PP_5175/PP_5176 | HlyD family secretion protein/hypothetical protein |
* | * | ÷ | NC_002947 | 5905722 | 5905767 | 46 | 3 [1] | [0] 2 | [PP_5176] | [PP_5176] |
* | * | ÷ | NC_002947 | 5945602 | 5945635 | 34 | 2 [1] | [1] 2 | PP_5210/PP_5211 | alcohol dehydrogenase/ChaC‑related protein |
* | * | ÷ | NC_002947 | 6011119 | 6011123 | 5 | 3 [0] | [1] 2 | norM/PP_5263 | multidrug resistance protein NorM/GGDEF domain‑containing protein |
* | * | ÷ | NC_002947 | 6021243 | 6021254 | 12 | 4 [0] | [1] 2 | dadX/dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase |
* | * | ÷ | NC_002947 | 6034823 | 6034839 | 17 | 2 [0] | [1] 2 | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
* | * | ÷ | NC_002947 | 6079829 | 6079838 | 10 | 3 [0] | [1] 2 | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
* | * | ÷ | NC_002947 | 6082910 | 6082969 | 60 | 2 [1] | [0] 2 | [PP_5332] | [PP_5332] |
* | * | ÷ | NC_002947 | 6100150 | 6100159 | 10 | 2 [0] | [0] 2 | PP_5730/PP_5350 | hypothetical protein/RpiR family transcriptional regulator |
* | * | ÷ | NC_002947 | 6183852 | 6183858 | 7 | 12 [0] | [0] NA | atpI/– | ATP synthase protein I/– |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1 = | 0 (0.000) | 12 (0.710) | 9/264 | 0.5 | 100% | intergenic (–/+146) | –/parB | –/chromosome‑partitioning protein |
? | NC_002947 | = 6183851 | 0 (0.000) | intergenic (‑3/–) | atpI/– | ATP synthase protein I/– | |||||
* | ? | NC_002947 | 699484 = | 6 (0.360) | 3 (0.220) | 3/210 | 1.1 | 26.4% | noncoding (51/77 nt) | PP_t05 | tRNA‑Ile |
? | NC_002947 | 5312903 = | 12 (0.900) | intergenic (‑34/+63) | PP_t51/PP_t50 | tRNA‑Ala/tRNA‑Ile | |||||
* | ? | NC_002947 | = 2474080 | 4 (0.240) | 3 (0.190) | 3/250 | 1.3 | 31.9% | intergenic (+19/+130) | PP_2166/PP_2167 | anti‑anti‑sigma factor/PhoD‑like phosphatase |
? | NC_002947 | 2474278 = | 9 (0.570) | coding (1783/1851 nt) | PP_2167 | PhoD‑like phosphatase | |||||
* | ? | NC_002947 | 3368518 = | 9 (0.540) | 11 (0.650) | 11/264 | 0.3 | 66.7% | intergenic (+219/‑142) | PP_2962/PP_2964 | alcohol dehydrogenase/transposase |
? | NC_002947 | 4459337 = | 2 (0.120) | coding (9/696 nt) | pcaI | 3‑oxoadipate CoA‑transferase subunit A | |||||
* | ? | NC_002947 | = 3385530 | 15 (0.890) | 19 (1.130) | 13/264 | 0.2 | 71.7% | coding (501/546 nt) | PP_2985 | hypothetical protein |
? | NC_002947 | = 4459341 | 0 (0.000) | coding (13/696 nt) | pcaI | 3‑oxoadipate CoA‑transferase subunit A | |||||
* | ? | NC_002947 | = 4810146 | 0 (0.000) | 8 (0.560) | 4/224 | 1.0 | 30.8% | intergenic (‑288/‑267) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
? | NC_002947 | = 5990927 | 36 (2.520) | intergenic (+243/‑303) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |