breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	26,837:1	+A	12.3%	intergenic (+33/+152)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	26,844	A→T	17.3%	intergenic (+40/+145)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	58,747	T→A	9.9%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	9.9%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,340	G→T	6.8%	intergenic (+28/+147)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,342	A→T	6.8%	intergenic (+30/+145)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,344	A→C	6.8%	intergenic (+32/+143)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,598	T→G	7.0%	P225P (CCA→CCC)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,603	C→A	7.0%	G224W (GGG→TGG)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	78,506	C→T	8.7%	intergenic (‑34/+27)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,507	G→C	8.1%	intergenic (‑35/+26)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,508	G→C	8.1%	intergenic (‑36/+25)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,509	A→G	8.0%	intergenic (‑37/+24)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	85,074	A→G	8.7%	intergenic (+52/+78)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,077	T→G	8.5%	intergenic (+55/+75)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,078:1	+T	9.2%	intergenic (+56/+74)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,081	T→G	11.2%	intergenic (+59/+71)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,088	C→A	8.3%	intergenic (+66/+64)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,091	Δ1 bp	8.6%	intergenic (+69/+61)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,093	C→A	9.1%	intergenic (+71/+59)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,096	C→T	9.0%	intergenic (+74/+56)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,104	G→A	7.5%	intergenic (+82/+48)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	87,493	T→A	8.1%	N98I (AAT→ATT)	PP_0076 ←	choline betaine‑binding protein
RA	93,015	G→A	8.1%	F193F (TTC→TTT) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,016	A→T	8.2%	F193Y (TTC→TAC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,024	T→G	10.2%	E190D (GAA→GAC)	trpB ←	tryptophan synthase subunit beta
RA	93,027	G→A	9.2%	V189V (GTC→GTT)	trpB ←	tryptophan synthase subunit beta
RA	93,030	G→A	10.4%	N188N (AAC→AAT)	trpB ←	tryptophan synthase subunit beta
RA	93,036	A→G	12.0%	V186V (GTT→GTC)	trpB ←	tryptophan synthase subunit beta
RA	93,042	G→A	13.4%	D184D (GAC→GAT)	trpB ←	tryptophan synthase subunit beta
RA	93,048	C→A	16.3%	L182L (CTG→CTT)	trpB ←	tryptophan synthase subunit beta
RA	93,051	G→C	16.7%	A181A (GCC→GCG)	trpB ←	tryptophan synthase subunit beta
RA	93,072	C→G	17.5%	L174L (CTG→CTC)	trpB ←	tryptophan synthase subunit beta
RA	93,075	G→C	18.0%	T173T (ACC→ACG)	trpB ←	tryptophan synthase subunit beta
RA	93,078	A→G	17.6%	G172G (GGT→GGC)	trpB ←	tryptophan synthase subunit beta
RA	93,081	G→A	17.6%	T171T (ACC→ACT) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,082	G→T	16.8%	T171N (ACC→AAC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,087	G→A	16.8%	A169A (GCC→GCT)	trpB ←	tryptophan synthase subunit beta
RA	93,090	G→C	16.7%	T168T (ACC→ACG)	trpB ←	tryptophan synthase subunit beta
RA	93,093	A→T	17.1%	V167V (GTT→GTA)	trpB ←	tryptophan synthase subunit beta
RA	93,096	T→C	16.8%	P166P (CCA→CCG)	trpB ←	tryptophan synthase subunit beta
RA	93,100	A→T	15.6%	V165E (GTG→GAG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,101	C→T	15.1%	V165M (GTG→ATG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,102	G→T	15.2%	I164I (ATC→ATA) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,104	T→C	15.8%	I164V (ATC→GTC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,105	C→T	15.8%	E163E (GAG→GAA)	trpB ←	tryptophan synthase subunit beta
RA	93,111	G→A	16.7%	G161G (GGC→GGT)	trpB ←	tryptophan synthase subunit beta
RA	93,132	C→G	19.8%	V154V (GTG→GTC)	trpB ←	tryptophan synthase subunit beta
RA	93,138	C→T	17.3%	A152A (GCG→GCA) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,140	C→G	18.3%	A152P (GCG→CCG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,143	G→T	19.2%	Q151K (CAG→AAG)	trpB ←	tryptophan synthase subunit beta
RA	93,147	G→A	18.4%	R149R (CGC→CGT)	trpB ←	tryptophan synthase subunit beta
RA	93,150	C→T	18.4%	E148E (GAG→GAA)	trpB ←	tryptophan synthase subunit beta
RA	93,153	G→A	16.3%	I147I (ATC→ATT) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,155	T→C	16.0%	I147V (ATC→GTC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,159	G→A	16.6%	T145T (ACC→ACT)	trpB ←	tryptophan synthase subunit beta
RA	93,171	G→A	12.9%	Y141Y (TAC→TAT)	trpB ←	tryptophan synthase subunit beta
RA	93,176	T→C	12.7%	I140V (ATC→GTC)	trpB ←	tryptophan synthase subunit beta
RA	93,195	G→A	9.0%	R133R (CGC→CGT)	trpB ←	tryptophan synthase subunit beta
RA	93,198	C→G	9.0%	A132A (GCG→GCC)	trpB ←	tryptophan synthase subunit beta
RA	93,201	G→T	9.1%	A131A (GCC→GCA)	trpB ←	tryptophan synthase subunit beta
RA	93,204	G→A	8.9%	V130V (GTC→GTT)	trpB ←	tryptophan synthase subunit beta
RA	93,207	A→G	8.6%	T129T (ACT→ACC)	trpB ←	tryptophan synthase subunit beta
RA	93,210	G→T	9.3%	A128A (GCC→GCA)	trpB ←	tryptophan synthase subunit beta
RA	93,213	G→T	9.3%	T127T (ACC→ACA) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,215	T→A	9.1%	T127S (ACC→TCC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,216	G→T	9.3%	A126A (GCC→GCA)	trpB ←	tryptophan synthase subunit beta
RA	93,219	G→A	9.2%	V125V (GTC→GTT)	trpB ←	tryptophan synthase subunit beta
RA	93,222	A→G	9.2%	G124G (GGT→GGC)	trpB ←	tryptophan synthase subunit beta
RA	93,225	G→A	9.1%	H123H (CAC→CAT)	trpB ←	tryptophan synthase subunit beta
RA	93,229	A→T	8.8%	M122K (ATG→AAG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,230	T→G	8.6%	M122L (ATG→CTG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,231	G→A	8.6%	G121G (GGC→GGT)	trpB ←	tryptophan synthase subunit beta
RA	93,234	G→A	8.6%	A120A (GCC→GCT)	trpB ←	tryptophan synthase subunit beta
RA	93,246	G→C	10.2%	A116A (GCC→GCG)	trpB ←	tryptophan synthase subunit beta
RA	93,252	C→G	9.2%	L114L (CTG→CTC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,254	G→T	9.2%	L114M (CTG→ATG) ‡	trpB ←	tryptophan synthase subunit beta
RA	104,318	C→A	5.5%	T159T (ACC→ACA)	PP_0099 →	hypothetical protein
RA	104,321	T→G	5.5%	I160M (ATT→ATG)	PP_0099 →	hypothetical protein
RA	126,115	A→G	9.3%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	9.2%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	134,397	A→C	5.0%	D98A (GAT→GCT) ‡	PP_0129 →	GGDEF domain‑containing protein
RA	134,398	T→A	5.2%	D98E (GAT→GAA) ‡	PP_0129 →	GGDEF domain‑containing protein
RA	134,399	G→T	5.3%	A99S (GCG→TCG)	PP_0129 →	GGDEF domain‑containing protein
RA	138,691	T→C	5.3%	L531P (CTG→CCG)	PP_0131 →	membrane‑anchored phosphodiesterase
RA	138,700	G→A	5.6%	R534Q (CGG→CAG)	PP_0131 →	membrane‑anchored phosphodiesterase
RA	160,310	C→T	7.2%	E27K (GAG→AAG)	PP_0149 ←	hypothetical protein
RA	160,311	A→G	7.2%	L26L (CTT→CTC)	PP_0149 ←	hypothetical protein
RA	162,281	A→T	6.1%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	5.2%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	163,034	A→G	6.4%	I267T (ATT→ACT) ‡	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	163,035	T→C	6.5%	I267V (ATT→GTT) ‡	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	163,036	G→A	6.5%	S266S (AGC→AGT) ‡	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	163,037	C→T	6.5%	S266N (AGC→AAC) ‡	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	163,467	T→G	5.2%	K123Q (AAG→CAG)	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	163,468	C→A	5.1%	L122L (CTG→CTT)	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	170,841	A→C	10.0%	intergenic (+22/‑548)	PP_0159 → / → PP_16SA	family III CoA‑transferase/16S ribosomal RNA
RA	181,876	G→T	5.5%	intergenic (+90/‑16)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,943	C→T	34.9%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,034	G→A	10.2%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,035	A→T	10.3%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036	T→C	10.3%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	195,559	C→A	20.7%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	9.3%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	10.0%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	38.2%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	16.5%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	19.6%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	21.8%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,372	A→G	5.4%	K626K (AAA→AAG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	24.7%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	9.6%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	16.6%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	7.7%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	12.9%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,179	A→G	7.3%	V895V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,185	C→T	6.1%	T897T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	16.6%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	23.3%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	25.7%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	15.1%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	9.1%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	205,404	T→A	5.4%	L3637Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	212,034	T→A	6.0%	L5847Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	214,014	T→A	5.6%	L6507Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	223,868	G→C	5.5%	G233R (GGG→CGG) ‡	PP_0171 →	ABC transporter ATP‑binding protein
RA	223,869	G→C	5.5%	G233A (GGG→GCG) ‡	PP_0171 →	ABC transporter ATP‑binding protein
RA	223,870	G→C	5.9%	G233G (GGG→GGC) ‡	PP_0171 →	ABC transporter ATP‑binding protein
RA	226,907	C→G	6.0%	A61G (GCC→GGC)	PP_0175 →	transcriptional regulator
RA	233,833	C→G	5.4%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	5.4%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	235,347	C→A	6.1%	intergenic (+44/+81)	PP_0183 → / ← argH	glutathione S‑transferase/argininosuccinate lyase
RA	235,390	G→A	5.2%	intergenic (+87/+38)	PP_0183 → / ← argH	glutathione S‑transferase/argininosuccinate lyase
RA	239,163	Δ1 bp	6.0%	coding (244/768 nt)	hemD →	uroporphyrinogen‑III synthase
RA	239,167	A→T	6.3%	Q83L (CAG→CTG)	hemD →	uroporphyrinogen‑III synthase
RA	239,169:1	+G	6.0%	coding (250/768 nt)	hemD →	uroporphyrinogen‑III synthase
RA	240,531	G→C	5.4%	A276P (GCC→CCC)	PP_0188 →	uroporphyrin‑III C‑methyltransferase
RA	240,536	G→C	5.3%	G277G (GGG→GGC)	PP_0188 →	uroporphyrin‑III C‑methyltransferase
RA	244,785	G→A	6.8%	R154K (AGG→AAG)	algP →	transcriptional regulator AlgP
RA	264,017	G→T	5.4%	L256L (CTG→CTT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,020	T→C	5.3%	G257G (GGT→GGC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,029	C→G	11.9%	A260A (GCC→GCG)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,032	G→T	11.4%	P261P (CCG→CCT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,056	C→T	13.1%	D269D (GAC→GAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,059	G→C	13.0%	L270L (CTG→CTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,062	C→T	13.3%	D271D (GAC→GAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,063	A→G	13.3%	K272E (AAG→GAG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,064	A→C	13.4%	K272T (AAG→ACG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,065	G→C	13.0%	K272N (AAG→AAC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,068	G→C	13.2%	A273A (GCG→GCC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,074	G→A	13.5%	E275E (GAG→GAA)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,077	C→T	13.5%	G276G (GGC→GGT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,080	G→T	13.4%	A277A (GCG→GCT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,081	A→C	13.7%	I278L (ATC→CTC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,083	C→T	13.6%	I278I (ATC→ATT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,087	T→G	13.7%	S280A (TCC→GCC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,092	G→A	13.6%	K281K (AAG→AAA)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,094	A→T	13.7%	Y282F (TAC→TTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,098	T→C	14.2%	R283R (CGT→CGC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,110	G→A	17.3%	Q287Q (CAG→CAA)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,132	A→C	18.7%	I295L (ATC→CTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,137	C→T	15.8%	Y296Y (TAC→TAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,140	G→A	15.4%	V297V (GTG→GTA)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,155	C→T	13.6%	Y302Y (TAC→TAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,158	C→T	13.6%	D303D (GAC→GAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,161	G→C	13.4%	A304A (GCG→GCC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,164	C→T	11.9%	F305F (TTC→TTT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,176	G→C	5.4%	L309L (CTG→CTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,177	G→T	5.4%	A310S (GCC→TCC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,180	G→A	5.3%	A311T (GCT→ACT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,181	C→A	5.3%	A311D (GCT→GAT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,182	T→G	5.3%	A311A (GCT→GCG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,185	A→G	5.3%	A312A (GCA→GCG)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,188	T→C	5.3%	V313V (GTT→GTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,190	C→G	5.2%	A314G (GCC→GGC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,193	A→C	5.6%	K315T (AAG→ACG)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,197	G→C	5.4%	L316L (CTG→CTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,202	T→C	5.2%	I318T (ATC→ACC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,206	T→C	5.6%	G319G (GGT→GGC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,213	C→T	5.6%	L322L (CTG→TTG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,215	G→C	5.7%	L322L (CTG→CTC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,218	A→C	6.1%	E323D (GAA→GAC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,221	A→G	6.1%	E324E (GAA→GAG)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,226	C→T	6.0%	T326I (ACC→ATC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,229	C→A	6.1%	T327N (ACC→AAC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,230	C→T	6.0%	T327T (ACC→ACT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,231	A→C	6.1%	T328P (ACT→CCT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,232	C→T	6.0%	T328I (ACT→ATT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,233	T→C	5.7%	T328T (ACT→ACC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	274,785	T→G	5.9%	D388A (GAC→GCC)	PP_0222 ←	DszA family monooxygenase
RA	274,788	A→T	6.1%	L387Q (CTG→CAG)	PP_0222 ←	DszA family monooxygenase
RA	274,791	C→A	5.8%	G386V (GGC→GTC)	PP_0222 ←	DszA family monooxygenase
RA	284,587	T→A	13.5%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	13.0%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	292,607	C→G	7.8%	intergenic (+22/‑38)	ssuA → / → ssuD	aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase
RA	295,699	C→A	8.6%	intergenic (+46/+96)	PP_0241 → / ← PP_0242	transporter/TetR family transcriptional regulator
RA	295,778	A→T	5.1%	intergenic (+125/+17)	PP_0241 → / ← PP_0242	transporter/TetR family transcriptional regulator
RA	311,682	G→A	6.0%	P232P (CCC→CCT)	PP_0256 ←	putative oxidoreductase
RA	311,685	G→A	6.0%	N231N (AAC→AAT)	PP_0256 ←	putative oxidoreductase
RA	311,688	C→T	5.7%	Q230Q (CAG→CAA)	PP_0256 ←	putative oxidoreductase
RA	311,691	G→C	5.9%	G229G (GGC→GGG)	PP_0256 ←	putative oxidoreductase
RA	311,695	C→A	6.0%	W228L (TGG→TTG) ‡	PP_0256 ←	putative oxidoreductase
RA	311,696	A→C	6.3%	W228G (TGG→GGG) ‡	PP_0256 ←	putative oxidoreductase
RA	311,700	A→G	8.9%	F226F (TTT→TTC)	PP_0256 ←	putative oxidoreductase
RA	311,706	G→C	8.8%	A224A (GCC→GCG)	PP_0256 ←	putative oxidoreductase
RA	311,712	G→A	8.9%	A222A (GCC→GCT)	PP_0256 ←	putative oxidoreductase
RA	311,715	G→C	9.1%	H221Q (CAC→CAG)	PP_0256 ←	putative oxidoreductase
RA	311,724	G→A	9.0%	D218D (GAC→GAT)	PP_0256 ←	putative oxidoreductase
RA	311,727	G→C	9.0%	D217E (GAC→GAG)	PP_0256 ←	putative oxidoreductase
RA	311,730	Δ1 bp	9.0%	coding (648/2346 nt)	PP_0256 ←	putative oxidoreductase
RA	311,734	G→C	8.9%	T215S (ACC→AGC) ‡	PP_0256 ←	putative oxidoreductase
RA	311,735	T→A	8.9%	T215S (ACC→TCC) ‡	PP_0256 ←	putative oxidoreductase
RA	311,736:1	+A	9.0%	coding (642/2346 nt)	PP_0256 ←	putative oxidoreductase
RA	311,739	T→A	8.7%	T213T (ACA→ACT)	PP_0256 ←	putative oxidoreductase
RA	311,742	A→T	8.6%	G212G (GGT→GGA)	PP_0256 ←	putative oxidoreductase
RA	311,745	T→C	8.4%	K211K (AAA→AAG)	PP_0256 ←	putative oxidoreductase
RA	311,751	G→A	8.6%	V209V (GTC→GTT)	PP_0256 ←	putative oxidoreductase
RA	311,757	G→T	8.1%	V207V (GTC→GTA)	PP_0256 ←	putative oxidoreductase
RA	311,760	G→C	8.4%	S206R (AGC→AGG) ‡	PP_0256 ←	putative oxidoreductase
RA	311,761	C→G	8.4%	S206T (AGC→ACC) ‡	PP_0256 ←	putative oxidoreductase
RA	311,762	T→A	9.0%	S206C (AGC→TGC) ‡	PP_0256 ←	putative oxidoreductase
RA	311,766	C→T	8.5%	G204G (GGG→GGA) ‡	PP_0256 ←	putative oxidoreductase
RA	311,767	C→T	8.5%	G204E (GGG→GAG) ‡	PP_0256 ←	putative oxidoreductase
RA	311,768	C→T	8.5%	G204R (GGG→AGG) ‡	PP_0256 ←	putative oxidoreductase
RA	311,769	C→G	8.5%	L203F (TTG→TTC) ‡	PP_0256 ←	putative oxidoreductase
RA	311,771	A→G	8.7%	L203L (TTG→CTG) ‡	PP_0256 ←	putative oxidoreductase
RA	311,778	G→A	8.8%	G200G (GGC→GGT)	PP_0256 ←	putative oxidoreductase
RA	311,805	G→A	7.2%	C191C (TGC→TGT)	PP_0256 ←	putative oxidoreductase
RA	312,717	T→C	5.1%	Q166R (CAG→CGG)	fdhD ←	protein sulfur transferase
RA	322,135	G→A	26.9%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	25.6%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	326,067	C→A	5.6%	*556Y (TAG→TAT)	PP_0269 ←	glutamate synthase large subunit
RA	326,070	T→G	6.6%	A555A (GCA→GCC)	PP_0269 ←	glutamate synthase large subunit
RA	337,812	A→G	30.6%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819:1	+A	31.2%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	31.4%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	30.1%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,828	G→T	30.3%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,830	Δ1 bp	32.0%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	30.9%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	343,610	T→A	6.9%	intergenic (‑163/‑77)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,611	G→C	6.9%	intergenic (‑164/‑76)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,612	T→A	7.0%	intergenic (‑165/‑75)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	344,035	A→G	5.8%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,044	Δ1 bp	7.3%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	7.1%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	358,088	A→G	30.4%	intergenic (+53/‑77)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,090	C→T	30.0%	intergenic (+55/‑75)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,093	T→C	31.8%	intergenic (+58/‑72)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,094	G→A	31.8%	intergenic (+59/‑71)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,097	A→G	30.9%	intergenic (+62/‑68)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,099	C→T	30.4%	intergenic (+64/‑66)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	359,721	G→A	7.3%	intergenic (+78/+42)	gbdR → / ← PP_0299	AraC family transcriptional regulator/hypothetical protein
RA	384,786	C→G	5.0%	R421G (CGC→GGC)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	385,478	A→C	7.8%	intergenic (+15/+20)	PP_0320 → / ← ltaE	methyl‑accepting chemotaxis transducer/low specificity l‑threonine aldolase
RA	385,479	C→G	9.3%	intergenic (+16/+19)	PP_0320 → / ← ltaE	methyl‑accepting chemotaxis transducer/low specificity l‑threonine aldolase
RA	395,849	C→A	7.7%	intergenic (+28/+176)	fdhA → / ← PP_0329	formaldehyde dehydrogenase/hypothetical protein
RA	395,850	A→T	7.2%	intergenic (+29/+175)	fdhA → / ← PP_0329	formaldehyde dehydrogenase/hypothetical protein
RA	395,851	T→G	8.5%	intergenic (+30/+174)	fdhA → / ← PP_0329	formaldehyde dehydrogenase/hypothetical protein
RA	403,270	T→A	5.8%	intergenic (‑70/+99)	msrA ← / ← PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
RA	403,274	G→C	5.7%	intergenic (‑74/+95)	msrA ← / ← PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
RA	404,191	T→G	5.7%	V623V (GTA→GTC)	PP_0337 ←	sensory box protein
RA	418,298	C→G	5.9%	L26L (CTC→CTG)	PP_0345 →	heptose kinase WapP
RA	418,299	C→G	6.1%	Q27E (CAG→GAG)	PP_0345 →	heptose kinase WapP
RA	431,353	C→T	5.2%	G322S (GGC→AGC)	PP_0354 ←	CBS domain‑containing protein
RA	445,089	T→G	12.5%	intergenic (+59/‑229)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,090	G→A	11.4%	intergenic (+60/‑228)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,091	C→G	13.7%	intergenic (+61/‑227)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,093	T→C	12.9%	intergenic (+63/‑225)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,098	T→C	15.6%	intergenic (+68/‑220)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,108	A→T	30.1%	intergenic (+78/‑210)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,110	T→G	19.4%	intergenic (+80/‑208)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,118	G→A	17.4%	intergenic (+88/‑200)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,123	G→A	17.5%	intergenic (+93/‑195)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,125	C→G	14.9%	intergenic (+95/‑193)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,126	T→C	16.1%	intergenic (+96/‑192)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,127	C→A	15.0%	intergenic (+97/‑191)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	469,777	C→G	6.6%	G395R (GGT→CGT)	PP_0386 ←	sensory box protein
RA	471,513	C→A	5.5%	Q475H (CAG→CAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,528	G→C	8.4%	S470S (TCC→TCG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,531	A→T	8.3%	I469I (ATT→ATA) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,532	A→G	8.3%	I469T (ATT→ACT) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,537	G→A	8.4%	N467N (AAC→AAT) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,538	T→A	8.5%	N467I (AAC→ATC) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,539	T→C	8.5%	N467D (AAC→GAC) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,542	G→T	8.9%	L466I (CTC→ATC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,555	C→T	11.6%	E461E (GAG→GAA)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,576	G→A	13.5%	R454R (CGC→CGT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,588	T→C	15.3%	A450A (GCA→GCG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,594	G→A	15.7%	D448D (GAC→GAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,600	G→A	15.4%	I446I (ATC→ATT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,615	C→T	17.4%	A441A (GCG→GCA)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,624	G→A	18.1%	I438I (ATC→ATT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,633	G→T	19.2%	T435T (ACC→ACA)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,636	G→C	20.2%	A434A (GCC→GCG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,657	G→A	23.2%	G427G (GGC→GGT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,660	G→A	22.4%	R426R (CGC→CGT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,666	G→A	21.7%	Y424Y (TAC→TAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,678	G→A	23.5%	D420D (GAC→GAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,681	C→G	23.7%	V419V (GTG→GTC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,687	T→C	22.3%	K417K (AAA→AAG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,702	G→A	21.1%	N412N (AAC→AAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,714	G→A	18.8%	I408I (ATC→ATT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,717	C→A	18.7%	L407L (CTG→CTT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,720	G→A	19.0%	D406D (GAC→GAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,732	C→A	18.6%	L402L (CTG→CTT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,759	G→A	14.7%	I393I (ATC→ATT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,762	G→C	14.3%	S392S (TCC→TCG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,765	A→G	14.4%	I391I (ATT→ATC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,768	C→A	13.0%	V390V (GTG→GTT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,771	C→G	12.0%	L389L (CTG→CTC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,777	C→A	9.4%	L387L (CTG→CTT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,783	C→G	8.2%	A385A (GCG→GCC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,786	C→T	8.0%	E384E (GAG→GAA)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,789	G→C	6.0%	V383V (GTC→GTG)	rpoD ←	RNA polymerase sigma 70 factor
RA	502,124	A→T	5.4%	Y137F (TAT→TTT)	PP_0413 →	polyamine ABC transporter permease
RA	502,126	A→T	5.4%	K138* (AAA→TAA)	PP_0413 →	polyamine ABC transporter permease
RA	503,828	Δ1 bp	10.1%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,834	A→T	9.9%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,835	A→T	9.9%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,840:1	+C	6.9%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	514,923	A→C	5.6%	I55S (ATC→AGC)	PP_0426 ←	membrane protein
RA	514,925	C→G	5.7%	L54L (CTG→CTC) ‡	PP_0426 ←	membrane protein
RA	514,927	G→T	5.7%	L54M (CTG→ATG) ‡	PP_0426 ←	membrane protein
RA	514,935	C→G	5.7%	G51A (GGC→GCC)	PP_0426 ←	membrane protein
RA	524,352	G→C	6.8%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	6.7%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,368	C→T	6.8%	intergenic (+232/‑584)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	541,349	G→A	5.0%	V1242I (GTT→ATT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,354	T→C	5.1%	G1243G (GGT→GGC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,360	G→C	5.3%	M1245I (ATG→ATC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,363	C→T	5.5%	Y1246Y (TAC→TAT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,367	C→T	6.0%	L1248F (CTC→TTC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,369	C→G	6.1%	L1248L (CTC→CTG) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,375	G→C	7.6%	L1250L (CTG→CTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,376	A→C	7.7%	N1251H (AAC→CAC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,382	T→C	7.6%	L1253L (TTG→CTG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,387	G→C	9.7%	V1254V (GTG→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,399	G→C	10.3%	M1258I (ATG→ATC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,402	C→T	10.7%	H1259H (CAC→CAT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,405	G→T	10.7%	A1260A (GCG→GCT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,411	C→G	10.6%	S1262S (TCC→TCG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,413	C→T	10.4%	T1263I (ACT→ATT) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,414	T→C	10.4%	T1263T (ACT→ACC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,417	T→A	10.4%	G1264G (GGT→GGA)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,418	T→C	10.3%	S1265P (TCC→CCC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,420	C→T	10.4%	S1265S (TCC→TCT) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,424	A→T	10.1%	S1267C (AGC→TGC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,425	G→C	10.0%	S1267T (AGC→ACC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,426	C→G	9.9%	S1267R (AGC→AGG) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,429	G→C	10.0%	L1268L (CTG→CTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,432	T→C	10.0%	V1269V (GTT→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,447	G→C	15.6%	L1274L (CTG→CTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,477	T→C	16.7%	R1284R (CGT→CGC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,483	G→C	16.4%	G1286G (GGG→GGC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,486	G→A	14.4%	E1287E (GAG→GAA)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,492	A→G	13.5%	E1289E (GAA→GAG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,495	G→C	13.6%	V1290V (GTG→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,501	G→T	12.1%	A1292A (GCG→GCT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,513	C→T	11.0%	Y1296Y (TAC→TAT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,516	C→T	11.2%	G1297G (GGC→GGT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,522	A→T	10.7%	A1299A (GCA→GCT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,528	C→G	9.8%	T1301T (ACC→ACG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,534	A→G	8.4%	Q1303Q (CAA→CAG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,543	C→T	8.3%	L1306L (CTC→CTT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,549	G→C	8.0%	V1308V (GTG→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,564	G→T	8.3%	V1313V (GTG→GTT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,565	A→G	8.6%	N1314D (AAC→GAC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,566	A→C	8.6%	N1314T (AAC→ACC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,567	C→A	8.1%	N1314K (AAC→AAA) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,964	C→T	5.2%	D67D (GAC→GAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	541,967	C→T	5.1%	Y68Y (TAC→TAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	541,974	C→T	5.5%	L71L (CTG→TTG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	541,994	C→T	5.7%	R77R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	541,995	C→A	5.7%	L78I (CTC→ATC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	541,997	C→G	5.6%	L78L (CTC→CTG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,000	G→A	5.6%	K79K (AAG→AAA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,001	C→T	5.5%	H80Y (CAC→TAC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,004	C→A	5.5%	R81S (CGC→AGC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,005	G→A	5.6%	R81H (CGC→CAC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,006	C→A	5.6%	R81R (CGC→CGA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,010	G→A	5.6%	V83I (GTA→ATA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,012	A→C	5.5%	V83V (GTA→GTC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,021	G→A	5.8%	E86E (GAG→GAA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,528	G→C	7.9%	L255L (CTG→CTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,534	T→C	8.5%	G257G (GGT→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,537	C→T	8.5%	G258G (GGC→GGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,543	C→T	9.8%	F260F (TTC→TTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,546	G→T	9.6%	A261A (GCG→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,549	T→A	9.5%	T262T (ACT→ACA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,555	C→T	16.2%	D264D (GAC→GAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,558	G→C	15.9%	L265L (CTG→CTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,567	G→T	18.9%	L268L (CTG→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,570	T→C	18.7%	Y269Y (TAT→TAC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,573	C→T	17.8%	R270R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,576	G→T	17.4%	R271R (CGG→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,606	C→T	18.2%	R281R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,609	G→T	17.9%	L282L (CTG→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,610	C→A	18.1%	L283M (CTG→ATG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,612	G→T	18.2%	L283L (CTG→CTT) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,615	T→A	18.1%	D284E (GAT→GAA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,619	T→C	17.2%	S286P (TCG→CCG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,620	C→G	17.2%	S286W (TCG→TGG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,621	G→C	17.2%	S286S (TCG→TCC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,624	G→T	17.2%	A287A (GCG→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,627	G→T	17.1%	P288P (CCG→CCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,629	A→G	17.2%	D289G (GAC→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,636	C→T	18.0%	I291I (ATC→ATT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,637	G→A	17.1%	V292M (GTG→ATG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,639	G→C	17.3%	V292V (GTG→GTC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,642	C→T	17.5%	R293R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,654	C→T	14.8%	R297R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,658	C→T	15.1%	L299L (CTG→TTG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,669	G→T	13.0%	A302A (GCG→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,678	T→G	12.9%	A305A (GCT→GCG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,682	C→T	12.4%	L307L (CTG→TTG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,684	G→C	12.5%	L307L (CTG→CTC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,687	C→T	12.3%	D308D (GAC→GAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,702	T→C	7.8%	G313G (GGT→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,707	C→T	7.0%	A315V (GCC→GTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,714	T→C	5.5%	T317T (ACT→ACC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,717	C→T	5.3%	G318G (GGC→GGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,718	T→G	5.4%	S319A (TCG→GCG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,720	G→T	5.2%	S319S (TCG→TCT) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,059	G→T	9.1%	L432L (CTG→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,065	C→T	10.3%	I434I (ATC→ATT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,071	G→A	10.9%	A436A (GCG→GCA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,074	T→C	11.1%	F437F (TTT→TTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,081	G→A	11.2%	V440I (GTA→ATA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,082	T→C	11.2%	V440A (GTA→GCA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,083	A→G	11.2%	V440V (GTA→GTG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,095	T→C	15.3%	G444G (GGT→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,101	T→C	15.3%	A446A (GCT→GCC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,113	C→T	15.5%	H450H (CAC→CAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,119	G→C	16.6%	L452L (CTG→CTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,126	G→A	17.5%	A455T (GCT→ACT) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,128	T→A	17.3%	A455A (GCT→GCA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,133	A→T	18.2%	Y457F (TAC→TTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,140	C→T	19.0%	A459A (GCC→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,164	C→T	18.1%	A467A (GCC→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,173	G→T	17.6%	V470V (GTG→GTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,176	G→T	16.6%	P471P (CCG→CCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,180	A→T	16.8%	T473S (ACC→TCC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,182	C→G	16.7%	T473T (ACC→ACG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,185	G→T	16.1%	L474L (CTG→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,191	C→T	16.7%	A476A (GCC→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,197	C→T	13.3%	L478L (CTC→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,203	G→A	10.5%	A480A (GCG→GCA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,206	T→C	10.7%	R481R (CGT→CGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,208	C→T	10.9%	A482V (GCG→GTG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,237	T→C	5.4%	S492P (TCG→CCG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,238	C→A	5.5%	S492* (TCG→TAG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,239	G→C	5.6%	S492S (TCG→TCC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,242	A→G	5.8%	P493P (CCA→CCG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,245	C→A	5.8%	A494A (GCC→GCA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,251	T→C	5.7%	G496G (GGT→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,253	A→C	5.7%	E497A (GAG→GCG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,254	G→A	5.7%	E497E (GAG→GAA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,257	A→G	5.7%	P498P (CCA→CCG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,730	A→G	5.2%	N656S (AAC→AGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,733	C→T	5.2%	A657V (GCT→GTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	547,423	T→G	7.2%	P90P (CCT→CCG)	fusA →	elongation factor G 1
RA	547,444	T→C	6.0%	I97I (ATT→ATC)	fusA →	elongation factor G 1
RA	547,450	A→C	6.2%	V99V (GTA→GTC)	fusA →	elongation factor G 1
RA	547,468	A→T	5.4%	V105V (GTA→GTT)	fusA →	elongation factor G 1
RA	547,516	G→A	5.7%	P121P (CCG→CCA)	fusA →	elongation factor G 1
RA	549,619	C→A	6.4%	A97A (GCC→GCA)	tufB →	elongation factor Tu‑B
RA	549,644	T→G	8.5%	C106G (TGC→GGC) ‡	tufB →	elongation factor Tu‑B
RA	549,645	G→T	8.4%	C106F (TGC→TTC) ‡	tufB →	elongation factor Tu‑B
RA	549,646	C→T	8.5%	C106C (TGC→TGT) ‡	tufB →	elongation factor Tu‑B
RA	549,652	C→A	9.6%	A108A (GCC→GCA)	tufB →	elongation factor Tu‑B
RA	549,655	C→T	9.8%	A109A (GCC→GCT)	tufB →	elongation factor Tu‑B
RA	549,658	T→C	9.3%	D110D (GAT→GAC)	tufB →	elongation factor Tu‑B
RA	549,661	T→C	9.4%	G111G (GGT→GGC)	tufB →	elongation factor Tu‑B
RA	549,670	G→A	10.6%	P114P (CCG→CCA)	tufB →	elongation factor Tu‑B
RA	549,673	A→G	10.6%	Q115Q (CAA→CAG)	tufB →	elongation factor Tu‑B
RA	549,694	G→C	14.0%	L122L (CTG→CTC)	tufB →	elongation factor Tu‑B
RA	549,695	T→G	13.9%	S123A (TCC→GCC) ‡	tufB →	elongation factor Tu‑B
RA	549,697	C→T	13.9%	S123S (TCC→TCT) ‡	tufB →	elongation factor Tu‑B
RA	549,706	A→T	14.5%	V126V (GTA→GTT)	tufB →	elongation factor Tu‑B
RA	549,715	G→T	14.5%	P129P (CCG→CCT)	tufB →	elongation factor Tu‑B
RA	549,716	T→G	14.4%	Y130D (TAC→GAC) ‡	tufB →	elongation factor Tu‑B
RA	549,717	A→C	14.1%	Y130S (TAC→TCC) ‡	tufB →	elongation factor Tu‑B
RA	549,718	C→G	14.3%	Y130* (TAC→TAG) ‡	tufB →	elongation factor Tu‑B
RA	549,724	G→C	14.8%	V132V (GTG→GTC)	tufB →	elongation factor Tu‑B
RA	549,727	C→G	14.6%	V133V (GTC→GTG)	tufB →	elongation factor Tu‑B
RA	549,740	G→T	14.3%	A138S (GCC→TCC) ‡	tufB →	elongation factor Tu‑B
RA	549,741	C→G	14.1%	A138G (GCC→GGC) ‡	tufB →	elongation factor Tu‑B
RA	549,745	C→T	13.7%	D139D (GAC→GAT)	tufB →	elongation factor Tu‑B
RA	549,747	T→A	14.2%	L140Q (CTG→CAG)	tufB →	elongation factor Tu‑B
RA	549,751	A→T	14.8%	V141V (GTA→GTT)	tufB →	elongation factor Tu‑B
RA	549,757	C→T	15.6%	D143D (GAC→GAT)	tufB →	elongation factor Tu‑B
RA	549,763	G→A	7.8%	E145E (GAG→GAA)	tufB →	elongation factor Tu‑B
RA	549,766	G→T	7.7%	L146L (CTG→CTT)	tufB →	elongation factor Tu‑B
RA	549,769	G→C	7.9%	L147L (CTG→CTC)	tufB →	elongation factor Tu‑B
RA	549,775	G→C	7.0%	L149L (CTG→CTC)	tufB →	elongation factor Tu‑B
RA	549,778	C→A	6.8%	V150V (GTC→GTA)	tufB →	elongation factor Tu‑B
RA	549,781	G→A	6.2%	E151E (GAG→GAA)	tufB →	elongation factor Tu‑B
RA	549,782	A→C	6.2%	M152L (ATG→CTG) ‡	tufB →	elongation factor Tu‑B
RA	549,784	G→C	6.1%	M152I (ATG→ATC) ‡	tufB →	elongation factor Tu‑B
RA	550,552	C→G	6.1%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	554,462	G→C	5.8%	L133L (CTG→CTC)	rpsC →	30S ribosomal protein S3
RA	554,474	A→G	8.4%	V137V (GTA→GTG)	rpsC →	30S ribosomal protein S3
RA	554,475	A→G	8.4%	M138V (ATG→GTG) ‡	rpsC →	30S ribosomal protein S3
RA	554,476	T→C	8.4%	M138T (ATG→ACG) ‡	rpsC →	30S ribosomal protein S3
RA	554,477	G→A	8.4%	M138I (ATG→ATA) ‡	rpsC →	30S ribosomal protein S3
RA	554,501	G→C	7.7%	A146A (GCG→GCC)	rpsC →	30S ribosomal protein S3
RA	554,504	A→T	8.0%	V147V (GTA→GTT)	rpsC →	30S ribosomal protein S3
RA	554,508	A→T	8.2%	N149Y (AAC→TAC) ‡	rpsC →	30S ribosomal protein S3
RA	554,509	A→C	8.8%	N149T (AAC→ACC) ‡	rpsC →	30S ribosomal protein S3
RA	554,510	C→G	8.2%	N149K (AAC→AAG) ‡	rpsC →	30S ribosomal protein S3
RA	554,513	C→A	8.1%	A150A (GCC→GCA)	rpsC →	30S ribosomal protein S3
RA	554,520	A→C	8.5%	I153L (ATT→CTT) ‡	rpsC →	30S ribosomal protein S3
RA	554,522	T→C	8.6%	I153I (ATT→ATC) ‡	rpsC →	30S ribosomal protein S3
RA	554,528	C→T	9.2%	A155A (GCC→GCT)	rpsC →	30S ribosomal protein S3
RA	554,529	A→G	9.3%	K156E (AAG→GAG) ‡	rpsC →	30S ribosomal protein S3
RA	554,531	G→A	9.4%	K156K (AAG→AAA) ‡	rpsC →	30S ribosomal protein S3
RA	554,534	C→T	9.1%	G157G (GGC→GGT)	rpsC →	30S ribosomal protein S3
RA	554,538	A→C	9.1%	K159Q (AAG→CAG) ‡	rpsC →	30S ribosomal protein S3
RA	554,539	A→G	9.1%	K159R (AAG→AGG) ‡	rpsC →	30S ribosomal protein S3
RA	554,540	G→T	9.3%	K159N (AAG→AAT) ‡	rpsC →	30S ribosomal protein S3
RA	554,544	C→A	9.0%	Q161K (CAG→AAG) ‡	rpsC →	30S ribosomal protein S3
RA	554,546	G→C	9.0%	Q161H (CAG→CAC) ‡	rpsC →	30S ribosomal protein S3
RA	554,547	G→T	9.1%	V162L (GTG→TTG) ‡	rpsC →	30S ribosomal protein S3
RA	554,548	T→G	8.6%	V162G (GTG→GGG) ‡	rpsC →	30S ribosomal protein S3
RA	554,549	G→C	9.0%	V162V (GTG→GTC) ‡	rpsC →	30S ribosomal protein S3
RA	554,550	A→T	9.3%	S163C (AGC→TGC) ‡	rpsC →	30S ribosomal protein S3
RA	554,551	G→C	9.3%	S163T (AGC→ACC) ‡	rpsC →	30S ribosomal protein S3
RA	554,561	C→T	10.8%	L166L (CTC→CTT)	rpsC →	30S ribosomal protein S3
RA	554,567	T→C	11.3%	G168G (GGT→GGC)	rpsC →	30S ribosomal protein S3
RA	554,573	G→A	13.5%	E170E (GAG→GAA)	rpsC →	30S ribosomal protein S3
RA	554,576	T→C	13.4%	I171I (ATT→ATC)	rpsC →	30S ribosomal protein S3
RA	554,579	T→A	13.2%	A172A (GCT→GCA)	rpsC →	30S ribosomal protein S3
RA	554,584	C→T	14.0%	T174I (ACC→ATC) ‡	rpsC →	30S ribosomal protein S3
RA	554,585	C→G	13.9%	T174T (ACC→ACG) ‡	rpsC →	30S ribosomal protein S3
RA	554,588	G→A	13.7%	E175E (GAG→GAA)	rpsC →	30S ribosomal protein S3
RA	554,606	T→C	7.6%	R181R (CGT→CGC)	rpsC →	30S ribosomal protein S3
RA	554,609	G→T	7.7%	V182V (GTG→GTT)	rpsC →	30S ribosomal protein S3
RA	554,612	T→G	6.4%	P183P (CCT→CCG)	rpsC →	30S ribosomal protein S3
RA	554,615	G→T	6.1%	L184L (CTG→CTT)	rpsC →	30S ribosomal protein S3
RA	554,621	C→G	6.0%	T186T (ACC→ACG)	rpsC →	30S ribosomal protein S3
RA	554,643	A→G	6.6%	N194D (AAC→GAC) ‡	rpsC →	30S ribosomal protein S3
RA	554,644	A→G	6.6%	N194S (AAC→AGC) ‡	rpsC →	30S ribosomal protein S3
RA	554,645	C→T	6.6%	N194N (AAC→AAT) ‡	rpsC →	30S ribosomal protein S3
RA	554,648	C→G	6.2%	T195T (ACC→ACG)	rpsC →	30S ribosomal protein S3
RA	554,649	T→G	6.7%	Y196D (TAC→GAC) ‡	rpsC →	30S ribosomal protein S3
RA	554,650	A→C	6.7%	Y196S (TAC→TCC) ‡	rpsC →	30S ribosomal protein S3
RA	554,651	C→A	6.4%	Y196* (TAC→TAA) ‡	rpsC →	30S ribosomal protein S3
RA	554,657	T→G	6.4%	A198A (GCT→GCG)	rpsC →	30S ribosomal protein S3
RA	554,660	C→G	6.7%	H199Q (CAC→CAG)	rpsC →	30S ribosomal protein S3
RA	554,664	A→G	6.6%	T201A (ACT→GCT)	rpsC →	30S ribosomal protein S3
RA	554,672	T→C	6.4%	G203G (GGT→GGC)	rpsC →	30S ribosomal protein S3
RA	554,673	G→A	6.4%	V204M (GTG→ATG) ‡	rpsC →	30S ribosomal protein S3
RA	554,675	G→C	6.4%	V204V (GTG→GTC) ‡	rpsC →	30S ribosomal protein S3
RA	554,676	A→T	6.2%	I205F (ATC→TTC) ‡	rpsC →	30S ribosomal protein S3
RA	554,677	T→G	6.4%	I205S (ATC→AGC) ‡	rpsC →	30S ribosomal protein S3
RA	554,681	T→C	6.8%	G206G (GGT→GGC)	rpsC →	30S ribosomal protein S3
RA	554,694	A→G	5.9%	I211V (ATC→GTC) ‡	rpsC →	30S ribosomal protein S3
RA	554,696	C→A	5.5%	I211I (ATC→ATA) ‡	rpsC →	30S ribosomal protein S3
RA	564,380:1	+A	7.7%	intergenic (+29/‑144)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	564,385	Δ1 bp	7.5%	intergenic (+34/‑139)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	565,989	T→A	5.4%	intergenic (+26/‑138)	katA → / → bfr‑I	catalase/bacterioferritin
RA	565,993	T→G	5.5%	intergenic (+30/‑134)	katA → / → bfr‑I	catalase/bacterioferritin
RA	565,994	T→A	5.5%	intergenic (+31/‑133)	katA → / → bfr‑I	catalase/bacterioferritin
RA	566,623	C→T	6.5%	intergenic (+32/+41)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,627	A→G	6.4%	intergenic (+36/+37)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,628	T→A	6.4%	intergenic (+37/+36)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,629	C→T	6.4%	intergenic (+38/+35)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,633	A→G	6.6%	intergenic (+42/+31)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	571,620	G→A	10.4%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,621	T→C	9.1%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	634,122	A→T	5.9%	Q142L (CAG→CTG)	PP_0546 →	sigma‑54 dependent transcriptional regulator
RA	644,143	G→C	6.1%	R293G (CGC→GGC)	acoA ←	acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit alpha
RA	644,144	G→C	6.6%	A292A (GCC→GCG)	acoA ←	acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit alpha
RA	675,590	A→T	7.1%	C38S (TGC→AGC)	PP_0577 ←	hypothetical protein
RA	675,592	C→G	6.6%	G37A (GGC→GCC)	PP_0577 ←	hypothetical protein
RA	675,594	A→T	7.1%	A36A (GCT→GCA)	PP_0577 ←	hypothetical protein
RA	684,844	Δ1 bp	5.0%	coding (1406/2400 nt)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	697,217	T→C	12.9%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	18.5%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	17.8%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,242	G→A	9.3%	intergenic (+166/‑585)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	47.9%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	711,082	C→G	5.3%	Q293E (CAA→GAA)	ileS →	isoleucine‑‑tRNA ligase
RA	711,085	G→C	5.2%	G294R (GGT→CGT) ‡	ileS →	isoleucine‑‑tRNA ligase
RA	711,086	G→C	5.2%	G294A (GGT→GCT) ‡	ileS →	isoleucine‑‑tRNA ligase
RA	711,089	C→G	5.3%	S295W (TCG→TGG)	ileS →	isoleucine‑‑tRNA ligase
RA	715,012:1	+T	8.9%	intergenic (+75/+2)	ispH → / ← PP_0607	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT
RA	715,019	Δ1 bp	8.2%	coding (478/483 nt)	PP_0607 ←	type IV pili biogenesis protein FimT
RA	727,318	C→T	5.9%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,319	A→T	5.7%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	727,320	A→G	5.8%	P5P (CCT→CCC)	PP_0621 ←	hypothetical protein
RA	732,413	A→T	6.1%	P650P (CCA→CCT)	clpB →	chaperone protein ClpB
RA	732,416	A→C	6.2%	P651P (CCA→CCC)	clpB →	chaperone protein ClpB
RA	732,419	C→T	5.5%	G652G (GGC→GGT)	clpB →	chaperone protein ClpB
RA	732,425	A→C	8.5%	V654V (GTA→GTC)	clpB →	chaperone protein ClpB
RA	732,428	G→C	8.5%	G655G (GGG→GGC)	clpB →	chaperone protein ClpB
RA	732,440	C→T	7.7%	G659G (GGC→GGT)	clpB →	chaperone protein ClpB
RA	732,443	T→C	7.7%	G660G (GGT→GGC)	clpB →	chaperone protein ClpB
RA	732,444	T→G	7.6%	Y661D (TAC→GAC) ‡	clpB →	chaperone protein ClpB
RA	732,445	A→T	7.7%	Y661F (TAC→TTC) ‡	clpB →	chaperone protein ClpB
RA	732,446	C→T	7.6%	Y661Y (TAC→TAT) ‡	clpB →	chaperone protein ClpB
RA	732,452	C→G	10.1%	T663T (ACC→ACG)	clpB →	chaperone protein ClpB
RA	732,455	G→A	10.0%	E664E (GAG→GAA)	clpB →	chaperone protein ClpB
RA	732,458	C→T	9.9%	A665A (GCC→GCT)	clpB →	chaperone protein ClpB
RA	732,464	G→T	11.0%	R667R (CGG→CGT)	clpB →	chaperone protein ClpB
RA	732,469	A→G	10.1%	K669R (AAG→AGG) ‡	clpB →	chaperone protein ClpB
RA	732,470	G→A	10.0%	K669K (AAG→AAA) ‡	clpB →	chaperone protein ClpB
RA	732,473	T→A	10.5%	P670P (CCT→CCA)	clpB →	chaperone protein ClpB
RA	732,476	C→T	10.3%	Y671Y (TAC→TAT)	clpB →	chaperone protein ClpB
RA	732,477	T→C	10.6%	S672P (TCG→CCG) ‡	clpB →	chaperone protein ClpB
RA	732,478	C→A	10.6%	S672* (TCG→TAG) ‡	clpB →	chaperone protein ClpB
RA	732,483	G→A	11.2%	V674M (GTG→ATG) ‡	clpB →	chaperone protein ClpB
RA	732,485	G→C	12.7%	V674V (GTG→GTC) ‡	clpB →	chaperone protein ClpB
RA	732,489	C→T	12.7%	L676L (CTG→TTG) ‡	clpB →	chaperone protein ClpB
RA	732,491	G→C	12.5%	L676L (CTG→CTC) ‡	clpB →	chaperone protein ClpB
RA	732,494	C→T	12.0%	D677D (GAC→GAT)	clpB →	chaperone protein ClpB
RA	732,498	G→A	12.3%	V679M (GTG→ATG) ‡	clpB →	chaperone protein ClpB
RA	732,500	G→C	12.4%	V679V (GTG→GTC) ‡	clpB →	chaperone protein ClpB
RA	732,506	A→G	12.7%	K681K (AAA→AAG)	clpB →	chaperone protein ClpB
RA	732,509	C→G	11.4%	A682A (GCC→GCG)	clpB →	chaperone protein ClpB
RA	732,512	C→T	11.3%	H683H (CAC→CAT)	clpB →	chaperone protein ClpB
RA	732,534	T→C	10.8%	L691L (TTG→CTG)	clpB →	chaperone protein ClpB
RA	732,542	G→T	9.6%	V693V (GTG→GTT)	clpB →	chaperone protein ClpB
RA	732,545	G→T	8.3%	L694L (CTG→CTT)	clpB →	chaperone protein ClpB
RA	732,548	A→T	6.1%	E695D (GAA→GAT)	clpB →	chaperone protein ClpB
RA	732,554	C→T	5.9%	G697G (GGC→GGT)	clpB →	chaperone protein ClpB
RA	732,557	C→T	5.9%	R698R (CGC→CGT)	clpB →	chaperone protein ClpB
RA	733,649	A→T	7.9%	intergenic (+20/‑27)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,650	A→T	6.3%	intergenic (+21/‑26)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	772,181	T→C	6.0%	intergenic (+39/‑160)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,182	T→G	6.1%	intergenic (+40/‑159)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,185	C→A	6.1%	intergenic (+43/‑156)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,186	G→A	6.1%	intergenic (+44/‑155)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	780,559	A→C	7.9%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,561	T→A	7.8%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,563	G→T	7.9%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	788,584	C→A	6.5%	intergenic (+31/‑182)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,586	A→T	6.4%	intergenic (+33/‑180)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,587	A→T	6.6%	intergenic (+34/‑179)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,589	T→G	6.6%	intergenic (+36/‑177)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,599	T→C	6.0%	intergenic (+46/‑167)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	790,159	A→T	5.1%	intergenic (+44/+16)	gdhA → / ← PP_0676	NADP‑dependent glutamate dehydrogenase/transcription elongation factor
RA	797,512	G→A	5.3%	intergenic (+33/‑44)	PP_0682 → / → PP_0683	inner membrane protein/hypothetical protein
RA	798,665	C→A	7.3%	intergenic (+17/+10)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	798,666	C→G	9.1%	intergenic (+18/+9)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	798,667	T→G	15.4%	intergenic (+19/+8)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	799,844	T→A	5.5%	D211V (GAC→GTC)	ispB ←	octaprenyl diphosphate synthase
RA	802,773	T→C	5.9%	intergenic (+28/‑58)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,774	C→A	5.9%	intergenic (+29/‑57)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,775	T→G	5.9%	intergenic (+30/‑56)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,776	G→A	5.5%	intergenic (+31/‑55)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	813,203	T→G	13.0%	intergenic (+107/+24)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,204	T→C	12.5%	intergenic (+108/+23)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,205	G→A	12.7%	intergenic (+109/+22)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,206	C→A	12.6%	intergenic (+110/+21)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	823,551	A→C	5.6%	H352Q (CAT→CAG)	PP_0708 ←	betaine‑aldehyde dehydrogenase
RA	823,556	C→T	5.9%	G351S (GGC→AGC)	PP_0708 ←	betaine‑aldehyde dehydrogenase
RA	823,558	C→G	5.9%	G350A (GGC→GCC)	PP_0708 ←	betaine‑aldehyde dehydrogenase
RA	823,560	A→G	5.6%	A349A (GCT→GCC)	PP_0708 ←	betaine‑aldehyde dehydrogenase
RA	823,565	G→T	5.5%	L348M (CTG→ATG)	PP_0708 ←	betaine‑aldehyde dehydrogenase
RA	827,244	C→T	7.6%	N144N (AAC→AAT)	ycaC‑I →	putative hydrolase
RA	827,248	C→G	7.8%	L146V (CTG→GTG)	ycaC‑I →	putative hydrolase
RA	827,257	G→C	8.0%	D149H (GAC→CAC) ‡	ycaC‑I →	putative hydrolase
RA	827,259	C→T	8.1%	D149D (GAC→GAT) ‡	ycaC‑I →	putative hydrolase
RA	827,265	C→A	8.1%	A151A (GCC→GCA)	ycaC‑I →	putative hydrolase
RA	827,269	C→G	8.3%	R153G (CGA→GGA) ‡	ycaC‑I →	putative hydrolase
RA	827,270	G→A	8.3%	R153Q (CGA→CAA) ‡	ycaC‑I →	putative hydrolase
RA	827,271	A→C	8.3%	R153R (CGA→CGC) ‡	ycaC‑I →	putative hydrolase
RA	827,278	G→A	8.4%	E156K (GAG→AAG) ‡	ycaC‑I →	putative hydrolase
RA	827,280	G→T	9.1%	E156D (GAG→GAT) ‡	ycaC‑I →	putative hydrolase
RA	827,283	T→A	8.5%	A157A (GCT→GCA)	ycaC‑I →	putative hydrolase
RA	827,289	G→T	8.6%	G159G (GGG→GGT)	ycaC‑I →	putative hydrolase
RA	827,295	A→G	8.7%	Q161Q (CAA→CAG)	ycaC‑I →	putative hydrolase
RA	827,316	G→T	9.5%	V168V (GTG→GTT)	ycaC‑I →	putative hydrolase
RA	827,319	C→T	10.2%	A169A (GCC→GCT)	ycaC‑I →	putative hydrolase
RA	827,322	C→T	9.7%	C170C (TGC→TGT)	ycaC‑I →	putative hydrolase
RA	827,331	C→T	9.7%	H173H (CAC→CAT)	ycaC‑I →	putative hydrolase
RA	827,334	T→C	9.8%	R174R (CGT→CGC)	ycaC‑I →	putative hydrolase
RA	827,349	C→T	6.8%	D179D (GAC→GAT)	ycaC‑I →	putative hydrolase
RA	827,352	C→T	6.8%	I180I (ATC→ATT)	ycaC‑I →	putative hydrolase
RA	827,358	G→T	7.2%	G182G (GGG→GGT)	ycaC‑I →	putative hydrolase
RA	833,814	C→G	5.7%	P163A (CCG→GCG)	PP_0717 →	membrane protein
RA	838,006	Δ1 bp	5.3%	intergenic (‑39/+41)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	838,010:1	+C	5.3%	intergenic (‑43/+37)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	838,718	A→C	6.9%	intergenic (‑18/+41)	rplY ← / ← prs	50S ribosomal protein L25/general stress protein Ctc/ribose‑phosphate pyrophosphokinase
RA	838,719	C→T	5.8%	intergenic (‑19/+40)	rplY ← / ← prs	50S ribosomal protein L25/general stress protein Ctc/ribose‑phosphate pyrophosphokinase
RA	838,720	A→G	6.0%	intergenic (‑20/+39)	rplY ← / ← prs	50S ribosomal protein L25/general stress protein Ctc/ribose‑phosphate pyrophosphokinase
RA	838,721	G→T	5.9%	intergenic (‑21/+38)	rplY ← / ← prs	50S ribosomal protein L25/general stress protein Ctc/ribose‑phosphate pyrophosphokinase
RA	853,958	G→C	6.2%	L126L (CTG→CTC)	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	853,962	A→G	5.0%	S128G (AGC→GGC)	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	853,965	G→C	5.5%	E129Q (GAG→CAG)	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	857,643	T→G	5.2%	D395A (GAC→GCC)	phr ←	deoxyribodipyrimidine photolyase
RA	858,322	G→C	9.2%	R169G (CGG→GGG)	phr ←	deoxyribodipyrimidine photolyase
RA	858,325	C→G	8.7%	A168P (GCA→CCA)	phr ←	deoxyribodipyrimidine photolyase
RA	863,901	T→A	6.8%	intergenic (+15/+21)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	863,902	T→A	6.2%	intergenic (+16/+20)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	863,903	T→A	5.8%	intergenic (+17/+19)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	865,409	A→C	5.1%	V140V (GTT→GTG)	upp ←	uracil phosphoribosyltransferase
RA	867,936	G→A	13.0%	intergenic (+31/+146)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	867,937	C→T	12.6%	intergenic (+32/+145)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,055	A→C	8.8%	intergenic (+150/+27)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	870,233	G→T	7.6%	R65S (CGC→AGC)	PP_5456 ←	hypothetical protein
RA	870,234	A→C	8.0%	A64A (GCT→GCG)	PP_5456 ←	hypothetical protein
RA	871,188	A→T	7.2%	intergenic (+33/+42)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,189	G→C	7.3%	intergenic (+34/+41)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,190	T→A	7.2%	intergenic (+35/+40)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,191	G→C	6.9%	intergenic (+36/+39)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,192	A→T	7.1%	intergenic (+37/+38)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	895,201	G→C	6.3%	intergenic (+38/+26)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,204	T→C	6.4%	intergenic (+41/+23)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,210	G→C	7.2%	intergenic (+47/+17)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,213	G→C	8.4%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→A	8.1%	intergenic (+56/+8)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,222	G→C	5.6%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	902,622	A→C	6.2%	intergenic (+45/+31)	trxB → / ← nadC	thioredoxin reductase/quinolinate phosphoribosyltransferase
RA	902,624	G→T	5.1%	intergenic (+47/+29)	trxB → / ← nadC	thioredoxin reductase/quinolinate phosphoribosyltransferase
RA	902,625	C→G	5.1%	intergenic (+48/+28)	trxB → / ← nadC	thioredoxin reductase/quinolinate phosphoribosyltransferase
RA	910,154	A→G	7.6%	Q220R (CAG→CGG)	fruB →	PTS fructose transporter subunit EI/HPr/IIA
RA	910,157	C→T	7.7%	P221L (CCG→CTG)	fruB →	PTS fructose transporter subunit EI/HPr/IIA
RA	914,627	Δ1 bp	5.3%	coding (1335/1743 nt)	fruA →	PTS fructose transporter subunit IIBC
RA	914,634	G→C	7.8%	A448P (GCC→CCC) ‡	fruA →	PTS fructose transporter subunit IIBC
RA	914,636	C→G	7.9%	A448A (GCC→GCG) ‡	fruA →	PTS fructose transporter subunit IIBC
RA	914,639	C→G	7.8%	A449A (GCC→GCG)	fruA →	PTS fructose transporter subunit IIBC
RA	914,641	G→C	8.4%	G450A (GGC→GCC)	fruA →	PTS fructose transporter subunit IIBC
RA	937,766	A→T	6.3%	L2620Q (CTG→CAG)	PP_0806 ←	surface adhesion protein
RA	937,771	A→T	6.7%	A2618A (GCT→GCA)	PP_0806 ←	surface adhesion protein
RA	939,928:1	+C	5.2%	coding (5697/18933 nt)	PP_0806 ←	surface adhesion protein
RA	952,039	C→T	5.2%	I289I (ATC→ATT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,043	A→G	5.2%	I291V (ATC→GTC) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,045	C→T	5.2%	I291I (ATC→ATT) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	955,152	A→G	14.0%	intergenic (+103/‑210)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,154	G→A	13.6%	intergenic (+105/‑208)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	T→A	13.8%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,156	T→C	14.1%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158	C→T	14.2%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	966,598	A→T	7.3%	L41* (TTG→TAG) ‡	PP_0828 ←	membrane protein
RA	966,599	A→T	6.9%	L41M (TTG→ATG) ‡	PP_0828 ←	membrane protein
RA	968,881	A→C	6.9%	intergenic (‑311/+20)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	988,874	C→T	5.9%	L241L (CTC→CTT)	hisS →	histidine‑‑tRNA ligase
RA	988,875	A→G	5.8%	K242E (AAG→GAG)	hisS →	histidine‑‑tRNA ligase
RA	994,950	T→A	9.1%	intergenic (+26/+99)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	994,951	T→A	8.7%	intergenic (+27/+98)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	1,013,231	A→T	28.4%	intergenic (+56/+75)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,237	C→A	39.7%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,238	A→T	39.1%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,244	G→C	42.6%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,245	G→C	42.6%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,251	A→T	46.0%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,252	T→G	47.4%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,258	A→T	36.3%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,033,806	T→A	8.4%	D141E (GAT→GAA)	PP_0891 →	hypothetical protein
RA	1,033,811	G→C	9.0%	R143P (CGG→CCG)	PP_0891 →	hypothetical protein
RA	1,033,816	T→A	9.4%	F145I (TTC→ATC)	PP_0891 →	hypothetical protein
RA	1,033,822:1	+C	5.3%	coding (439/582 nt)	PP_0891 →	hypothetical protein
RA	1,045,261	T→C	5.8%	intergenic (+31/+75)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,265	G→A	5.7%	intergenic (+35/+71)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,268	T→C	6.2%	intergenic (+38/+68)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,272	G→A	6.3%	intergenic (+42/+64)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,278	T→C	5.1%	intergenic (+48/+58)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,058,260	Δ1 bp	7.2%	intergenic (‑186/+34)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,058,264:1	+T	7.1%	intergenic (‑190/+30)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,070,265	G→C	13.2%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	13.3%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,078,001	G→A	7.9%	G127D (GGC→GAC)	mreD →	rod shape‑determining protein MreD
RA	1,103,281	T→G	5.6%	L12R (CTT→CGT)	murA →	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
RA	1,103,283	G→C	5.2%	D13H (GAC→CAC) ‡	murA →	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
RA	1,103,285	C→A	5.2%	D13E (GAC→GAA) ‡	murA →	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
RA	1,111,320	A→C	5.4%	intergenic (+36/‑74)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,111,325	G→A	5.0%	intergenic (+41/‑69)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,113,838	C→G	6.1%	intergenic (+28/+20)	hupN → / ← rlmF	DNA‑binding protein HU/ribosomal RNA large subunit methyltransferase F
RA	1,113,839	T→C	6.6%	intergenic (+29/+19)	hupN → / ← rlmF	DNA‑binding protein HU/ribosomal RNA large subunit methyltransferase F
RA	1,113,840	T→A	6.1%	intergenic (+30/+18)	hupN → / ← rlmF	DNA‑binding protein HU/ribosomal RNA large subunit methyltransferase F
RA	1,123,425	A→C	5.5%	noncoding (381/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,123,426	C→A	5.1%	noncoding (380/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,123,427	T→A	5.5%	noncoding (379/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,123,428	T→G	5.5%	noncoding (378/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,123,429	G→T	5.2%	noncoding (377/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,130,144	G→T	5.2%	intergenic (‑193/+111)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,145	C→G	5.4%	intergenic (‑194/+110)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,146	A→C	5.9%	intergenic (‑195/+109)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,198	A→T	8.9%	intergenic (‑247/+57)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,145,439	C→T	12.6%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	14.3%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	14.4%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	13.5%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,148,799	G→T	7.6%	T151K (ACG→AAG)	PP_1007 ←	transmembrane sensor
RA	1,148,802	A→C	7.7%	L150R (CTT→CGT)	PP_1007 ←	transmembrane sensor
RA	1,149,921	C→G	7.3%	intergenic (‑162/+95)	PP_1008 ← / ← gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,149,933	G→C	8.0%	intergenic (‑174/+83)	PP_1008 ← / ← gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,171,614	T→G	6.3%	Q21P (CAG→CCG)	PP_1026 ←	M23/M37 family peptidase
RA	1,171,615:1	+C	6.2%	coding (61/828 nt)	PP_1026 ←	M23/M37 family peptidase
RA	1,171,624	C→A	5.2%	G18C (GGC→TGC)	PP_1026 ←	M23/M37 family peptidase
RA	1,178,757	T→A	16.6%	intergenic (+56/+38)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,758	G→T	16.6%	intergenic (+57/+37)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,759	A→C	17.0%	intergenic (+58/+36)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,760	T→A	17.3%	intergenic (+59/+35)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,184,591	G→C	14.5%	intergenic (‑201/‑211)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,594	G→C	13.9%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,618	A→T	5.0%	intergenic (‑228/‑184)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,198,338	C→T	6.5%	A214A (GCC→GCT)	gspE →	protein secretion protein
RA	1,198,339	A→G	6.4%	S215G (AGC→GGC)	gspE →	protein secretion protein
RA	1,206,699	G→C	5.5%	L770V (CTG→GTG)	PP_1058 ←	hypothetical protein
RA	1,206,701	G→C	5.6%	P769R (CCG→CGG)	PP_1058 ←	hypothetical protein
RA	1,206,703	G→C	5.6%	H768Q (CAC→CAG)	PP_1058 ←	hypothetical protein
RA	1,236,974	G→A	5.2%	intergenic (+7/+31)	ybaK → / ← PP_1078	Cys‑tRNAPro deacylase/ABC transporter ATP‑binding protein
RA	1,236,982	C→T	5.9%	intergenic (+15/+23)	ybaK → / ← PP_1078	Cys‑tRNAPro deacylase/ABC transporter ATP‑binding protein
RA	1,236,983	A→T	6.1%	intergenic (+16/+22)	ybaK → / ← PP_1078	Cys‑tRNAPro deacylase/ABC transporter ATP‑binding protein
RA	1,236,984	A→G	6.3%	intergenic (+17/+21)	ybaK → / ← PP_1078	Cys‑tRNAPro deacylase/ABC transporter ATP‑binding protein
RA	1,237,662	C→T	7.1%	L151L (CTG→CTA) ‡	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,237,663	A→G	7.0%	L151P (CTG→CCG) ‡	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,241,533	A→G	6.2%	intergenic (+19/‑73)	PP_1080 → / → grxD	molybdopterin‑binding oxidoreductase/monothiol glutaredoxin
RA	1,241,535	G→C	6.4%	intergenic (+21/‑71)	PP_1080 → / → grxD	molybdopterin‑binding oxidoreductase/monothiol glutaredoxin
RA	1,241,537	C→T	6.4%	intergenic (+23/‑69)	PP_1080 → / → grxD	molybdopterin‑binding oxidoreductase/monothiol glutaredoxin
RA	1,241,968:1	+T	8.6%	intergenic (+27/+31)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,241,973	Δ1 bp	8.3%	intergenic (+32/+26)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,248,219	C→A	6.3%	intergenic (+26/+42)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,220	T→C	6.3%	intergenic (+27/+41)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,223	G→A	6.4%	intergenic (+30/+38)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,224	T→G	6.3%	intergenic (+31/+37)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,275,090	G→C	8.2%	intergenic (‑281/+31)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,275,093	G→C	7.6%	intergenic (‑284/+28)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,289,852	Δ1 bp	7.1%	coding (1119/2349 nt)	PP_1126 →	hydrolase
RA	1,289,857	A→T	7.2%	N375I (AAT→ATT)	PP_1126 →	hydrolase
RA	1,289,861:1	+A	5.8%	coding (1128/2349 nt)	PP_1126 →	hydrolase
JC	1,311,725	Δ84 bp	8.0%	intergenic (‑187/+8)	PP_1144 ← / ← rapA	membrane protein/RNA polymerase‑associated protein RapA
RA	1,321,516	C→A	5.4%	K407N (AAG→AAT) ‡	PP_1154 ←	sensory box protein
RA	1,321,517	T→A	5.4%	K407M (AAG→ATG) ‡	PP_1154 ←	sensory box protein
RA	1,321,518	T→G	5.3%	K407Q (AAG→CAG) ‡	PP_1154 ←	sensory box protein
RA	1,327,127	C→T	50.0%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,342,257	C→T	8.3%	intergenic (‑35/+20)	PP_1166 ← / ← PP_1167	DMT superfamily permease/TRAP dicarboxylate transporter subunit DctM
RA	1,342,258	A→T	7.8%	intergenic (‑36/+19)	PP_1166 ← / ← PP_1167	DMT superfamily permease/TRAP dicarboxylate transporter subunit DctM
RA	1,342,259	A→G	7.8%	intergenic (‑37/+18)	PP_1166 ← / ← PP_1167	DMT superfamily permease/TRAP dicarboxylate transporter subunit DctM
RA	1,344,106	G→T	6.3%	P13T (CCT→ACT)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,113	G→C	6.3%	A10A (GCC→GCG) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,114	G→C	6.5%	A10G (GCC→GGC) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,121	A→C	5.1%	C8G (TGC→GGC)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,347,141	T→A	14.0%	intergenic (‑243/+161)	udh ← / ← galP‑I	uronate dehydrogenase/porin‑like protein
RA	1,348,779:1	+G	6.8%	intergenic (‑239/+515)	galP‑I ← / ← PP_1174	porin‑like protein/hypothetical protein
RA	1,350,507	T→A	7.3%	K11N (AAA→AAT) ‡	PP_1176 ←	hypothetical protein
RA	1,350,508	T→A	7.3%	K11I (AAA→ATA) ‡	PP_1176 ←	hypothetical protein
RA	1,356,411	G→C	7.3%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,364,664	A→T	5.1%	intergenic (+28/+121)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,665	A→T	5.4%	intergenic (+29/+120)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,666	A→T	5.8%	intergenic (+30/+119)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,376,327	A→T	12.1%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,328	G→C	12.1%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,329	A→T	12.6%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,380,640	T→C	5.4%	intergenic (‑22/+113)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,380,728	G→T	5.7%	intergenic (‑110/+25)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,380,729	T→A	5.2%	intergenic (‑111/+24)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,380,730	T→A	5.6%	intergenic (‑112/+23)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,380,731	A→C	5.2%	intergenic (‑113/+22)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,383,260	A→T	8.9%	L16Q (CTG→CAG)	PP_1204 ←	lipoprotein
RA	1,385,153	G→A	5.2%	intergenic (‑117/+44)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,158	T→C	5.2%	intergenic (‑122/+39)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,392,921	T→C	17.3%	intergenic (+85/‑101)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,923	A→G	18.1%	intergenic (+87/‑99)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,925	G→A	17.4%	intergenic (+89/‑97)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,927:1	+A	16.4%	intergenic (+91/‑95)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,933	C→G	17.3%	intergenic (+97/‑89)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,942	T→C	14.4%	intergenic (+106/‑80)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,397,106	T→A	6.7%	S16R (AGT→AGA)	tolA →	colicin S4/filamentous phage transport protein
RA	1,397,107	G→C	7.2%	V17L (GTC→CTC) ‡	tolA →	colicin S4/filamentous phage transport protein
RA	1,397,108	T→A	7.2%	V17D (GTC→GAC) ‡	tolA →	colicin S4/filamentous phage transport protein
RA	1,400,880	A→T	5.1%	intergenic (+37/‑132)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,403,596	G→A	21.9%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	22.1%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,435,822	A→T	5.2%	L50Q (CTG→CAG)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,829	A→T	5.2%	C48S (TGC→AGC)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,450,050	T→C	6.1%	T9A (ACC→GCC)	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,056	G→A	7.2%	R7C (CGC→TGC)	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,059	T→C	6.4%	N6D (AAT→GAT)	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,065	G→A	6.4%	Q4* (CAA→TAA)	PP_1268 ←	HtrA suppressor protein SohA
RA	1,457,925	C→A	5.3%	H93N (CAC→AAC)	PP_1276 →	hypothetical protein
RA	1,458,124	T→G	8.1%	intergenic (+17/+23)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,126	A→T	8.1%	intergenic (+19/+21)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,128	C→A	8.4%	intergenic (+21/+19)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,475,002	T→G	9.9%	intergenic (‑775/+26)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,475,003	C→A	9.2%	intergenic (‑776/+25)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,481,522	T→C	5.3%	S75G (AGC→GGC)	rhlB ←	ATP‑dependent RNA helicase RhlB
RA	1,483,883	A→G	6.0%	intergenic (+21/‑47)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,483,884	T→G	6.0%	intergenic (+22/‑46)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,483,885	C→G	5.8%	intergenic (+23/‑45)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,483,886	C→A	5.9%	intergenic (+24/‑44)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,483,887	C→T	6.7%	intergenic (+25/‑43)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,483,899	C→G	5.8%	intergenic (+37/‑31)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,484,303	T→G	100%	V125G (GTC→GGC)	yhdX →	amino acid ABC transporter permease
RA	1,486,574	G→C	5.1%	M116I (ATG→ATC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,580	G→A	12.7%	V118V (GTG→GTA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,593	C→A	16.9%	R123R (CGG→AGG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,594	G→A	17.0%	R123Q (CGG→CAG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,596	C→A	17.3%	R124S (CGC→AGC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,597	G→A	17.1%	R124H (CGC→CAC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,598	C→G	17.1%	R124R (CGC→CGG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,604	C→G	19.9%	A126A (GCC→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,607	G→A	20.0%	E127E (GAG→GAA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,613	T→C	25.0%	I129I (ATT→ATC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,622	C→T	26.3%	H132H (CAC→CAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,625	C→T	25.8%	Y133Y (TAC→TAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,630	A→C	25.5%	E135A (GAG→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,634	T→C	26.1%	R136R (CGT→CGC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,638	C→A	25.3%	R138R (CGG→AGG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,639	G→A	25.3%	R138Q (CGG→CAG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,640	G→A	25.6%	R138R (CGG→CGA) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,649	G→A	29.8%	E141E (GAG→GAA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,655	A→C	33.4%	A143A (GCA→GCC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,656	C→A	32.7%	H144N (CAC→AAC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,661	G→A	35.6%	K145K (AAG→AAA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,664	C→T	37.5%	Y146Y (TAC→TAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,667	T→G	35.5%	P147P (CCT→CCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,674	T→C	36.1%	L150L (TTG→CTG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,676	G→T	35.7%	L150F (TTG→TTT) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,679	T→A	35.7%	S151S (TCT→TCA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,703	C→G	40.3%	A159A (GCC→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,712	C→T	42.7%	R162R (CGC→CGT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,716	T→C	40.5%	L164L (TTG→CTG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,718	G→T	39.3%	L164F (TTG→TTT) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,727	G→C	35.7%	K167N (AAG→AAC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,730	C→G	36.2%	P168P (CCC→CCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,734	A→G	36.0%	I170V (ATC→GTC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,763	A→G	34.0%	A179A (GCA→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,766	G→C	37.8%	L180L (CTG→CTC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,769	C→T	33.0%	D181D (GAC→GAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,793	C→G	30.8%	L189L (CTC→CTG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,799	C→G	32.5%	T191T (ACC→ACG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,806	G→A	28.6%	G194S (GGC→AGC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,808	C→T	28.7%	G194G (GGC→GGT) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,811	G→T	28.6%	L195L (CTG→CTT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,817	G→T	28.2%	E197D (GAG→GAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,820	T→A	27.9%	D198E (GAT→GAA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,833	C→A	25.6%	L203I (CTC→ATC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,838	C→T	23.3%	C204C (TGC→TGT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,844	C→G	22.4%	T206T (ACC→ACG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,862	C→G	16.8%	A212A (GCC→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,866	A→C	16.9%	T214P (ACC→CCC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,867	C→A	16.1%	T214N (ACC→AAC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,868	C→G	16.7%	T214T (ACC→ACG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,871	G→T	16.2%	V215V (GTG→GTT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,874	G→C	15.8%	A216A (GCG→GCC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,877	C→T	15.8%	N217N (AAC→AAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,880	G→T	15.9%	R218R (CGG→CGT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,883	T→G	16.7%	V219V (GTT→GTG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,895	C→T	8.5%	D223D (GAC→GAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,896	A→C	8.7%	K224Q (AAG→CAG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,902	G→C	5.6%	E226Q (GAG→CAG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,496,825	C→A	5.5%	intergenic (+50/+22)	mdeA → / ← PP_1309	methionine gamma‑lyase/hypothetical protein
RA	1,497,841	T→G	7.2%	M141R (ATG→AGG)	PP_1310 →	hypothetical protein
RA	1,506,936	G→A	8.2%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	7.0%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	7.9%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,087	G→A	12.7%	intergenic (+17/+45)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,088	G→T	12.3%	intergenic (+18/+44)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,089	A→C	12.6%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,090	T→C	12.6%	intergenic (+20/+42)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,534,921	G→A	16.6%	intergenic (+70/‑113)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,923	T→G	17.5%	intergenic (+72/‑111)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,925	C→T	17.8%	intergenic (+74/‑109)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,931	T→C	22.3%	intergenic (+80/‑103)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,935	C→T	22.1%	intergenic (+84/‑99)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,940	A→G	22.5%	intergenic (+89/‑94)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,944	G→A	23.2%	intergenic (+93/‑90)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,950	A→G	21.2%	intergenic (+99/‑84)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,952	C→A	20.2%	intergenic (+101/‑82)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,954	T→C	20.2%	intergenic (+103/‑80)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,961	G→A	8.8%	intergenic (+110/‑73)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,544,531	C→A	42.2%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	38.9%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	39.1%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	36.6%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	39.4%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	40.0%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,549,801	C→T	8.6%	G53G (GGC→GGT)	groL →	chaperonin GroEL
RA	1,549,804	T→A	8.7%	V54V (GTT→GTA)	groL →	chaperonin GroEL
RA	1,549,807	C→G	8.8%	S55S (TCC→TCG)	groL →	chaperonin GroEL
RA	1,549,810	C→T	8.7%	V56V (GTC→GTT)	groL →	chaperonin GroEL
RA	1,549,816	A→G	8.3%	K58K (AAA→AAG)	groL →	chaperonin GroEL
RA	1,549,825	G→A	8.4%	E61E (GAG→GAA)	groL →	chaperonin GroEL
RA	1,549,829	A→G	8.5%	K63E (AAA→GAA)	groL →	chaperonin GroEL
RA	1,549,835	G→A	8.5%	A65T (GCT→ACT) ‡	groL →	chaperonin GroEL
RA	1,549,836	C→A	7.6%	A65D (GCT→GAT) ‡	groL →	chaperonin GroEL
RA	1,549,837	T→G	8.5%	A65A (GCT→GCG) ‡	groL →	chaperonin GroEL
RA	1,549,855	C→A	9.9%	A71A (GCC→GCA)	groL →	chaperonin GroEL
RA	1,549,859	C→A	9.9%	L73M (CTG→ATG)	groL →	chaperonin GroEL
RA	1,549,862	G→C	10.0%	V74L (GTC→CTC) ‡	groL →	chaperonin GroEL
RA	1,549,864	C→G	9.4%	V74V (GTC→GTG) ‡	groL →	chaperonin GroEL
RA	1,549,865	A→C	9.5%	K75Q (AAG→CAG) ‡	groL →	chaperonin GroEL
RA	1,549,866	A→G	9.5%	K75R (AAG→AGG) ‡	groL →	chaperonin GroEL
RA	1,549,867	G→C	10.0%	K75N (AAG→AAC) ‡	groL →	chaperonin GroEL
RA	1,549,873	T→G	10.1%	V77V (GTT→GTG)	groL →	chaperonin GroEL
RA	1,549,879	C→G	9.8%	S79S (TCC→TCG)	groL →	chaperonin GroEL
RA	1,549,883	G→A	9.7%	A81T (GCC→ACC)	groL →	chaperonin GroEL
RA	1,549,892	G→A	10.0%	A84T (GCT→ACT)	groL →	chaperonin GroEL
RA	1,549,915	C→T	8.8%	T91T (ACC→ACT)	groL →	chaperonin GroEL
RA	1,549,918	T→G	9.0%	A92A (GCT→GCG)	groL →	chaperonin GroEL
RA	1,549,927	G→C	8.3%	L95L (CTG→CTC)	groL →	chaperonin GroEL
RA	1,549,929	C→G	8.2%	A96G (GCT→GGT)	groL →	chaperonin GroEL
RA	1,549,936	C→T	5.4%	A98A (GCC→GCT)	groL →	chaperonin GroEL
RA	1,549,942	C→T	7.0%	V100V (GTC→GTT)	groL →	chaperonin GroEL
RA	1,551,324	G→T	7.9%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	8.6%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,555,430	A→C	9.8%	intergenic (+26/+48)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,431	T→A	8.8%	intergenic (+27/+47)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,432	G→T	8.1%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,570,469	A→C	7.9%	intergenic (+35/‑153)	pcaF‑I → / → pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
RA	1,570,510	G→A	8.9%	intergenic (+76/‑112)	pcaF‑I → / → pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
RA	1,572,290	T→C	5.5%	L124L (TTG→CTG) ‡	pcaB →	3‑carboxy‑cis,cis‑muconate cycloisomerase
RA	1,572,291	T→A	5.4%	L124* (TTG→TAG) ‡	pcaB →	3‑carboxy‑cis,cis‑muconate cycloisomerase
RA	1,572,292	G→A	5.4%	L124L (TTG→TTA) ‡	pcaB →	3‑carboxy‑cis,cis‑muconate cycloisomerase
RA	1,575,240	G→A	6.4%	intergenic (‑184/+26)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,575,242	T→A	5.2%	intergenic (‑186/+24)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,575,243	T→A	6.0%	intergenic (‑187/+23)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,575,245	T→C	5.9%	intergenic (‑189/+21)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,592,024	C→A	13.8%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	13.4%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,598,855	C→A	8.3%	intergenic (‑52/+79)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,870	A→G	12.7%	intergenic (‑67/+64)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,873	C→G	11.2%	intergenic (‑70/+61)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,874	T→C	11.1%	intergenic (‑71/+60)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,875	G→A	11.2%	intergenic (‑72/+59)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,876	C→G	11.2%	intergenic (‑73/+58)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,879	C→T	11.2%	intergenic (‑76/+55)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,894	T→G	5.6%	intergenic (‑91/+40)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,602,562	C→T	6.2%	Q123* (CAG→TAG) ‡	PP_5469 →	SAM‑dependent methyltransferase
RA	1,602,563	A→G	6.3%	Q123R (CAG→CGG) ‡	PP_5469 →	SAM‑dependent methyltransferase
RA	1,625,249	G→T	10.1%	intergenic (+30/+27)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,625,250	A→C	18.1%	intergenic (+31/+26)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,629,220	G→T	6.2%	V230F (GTC→TTC) ‡	mucB →	sigma factor AlgU regulator MucB
RA	1,629,222	C→G	6.2%	V230V (GTC→GTG) ‡	mucB →	sigma factor AlgU regulator MucB
RA	1,629,224	A→C	6.2%	N231T (AAC→ACC)	mucB →	sigma factor AlgU regulator MucB
RA	1,637,357	T→C	11.7%	intergenic (+24/+42)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,367	A→T	15.1%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	14.9%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	11.2%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,384	A→G	5.6%	intergenic (+51/+15)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,501	A→T	5.2%	intergenic (‑49/‑262)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,607	A→G	14.4%	intergenic (‑155/‑156)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,617	C→T	16.6%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,618	G→T	16.4%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,622	G→A	16.1%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,623	T→C	16.1%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,627	A→C	16.6%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,628	A→G	15.9%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,638	C→T	9.7%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,306	G→A	10.0%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,313	G→C	14.0%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,319	G→C	14.1%	intergenic (‑105/+47)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,320	C→G	14.1%	intergenic (‑106/+46)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,321	G→C	14.1%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,327	G→C	15.7%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,334	T→C	12.9%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,343	G→A	9.6%	intergenic (‑129/+23)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,345	C→T	7.0%	intergenic (‑131/+21)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,645,927	T→A	9.4%	Q491L (CAG→CTG)	gcd ←	quinoprotein glucose dehydrogenase
RA	1,645,929	G→C	9.4%	S490R (AGC→AGG) ‡	gcd ←	quinoprotein glucose dehydrogenase
RA	1,645,931	T→A	9.4%	S490C (AGC→TGC) ‡	gcd ←	quinoprotein glucose dehydrogenase
RA	1,647,176	C→T	5.6%	G75S (GGC→AGC)	gcd ←	quinoprotein glucose dehydrogenase
RA	1,647,177	C→G	5.7%	L74L (CTG→CTC) ‡	gcd ←	quinoprotein glucose dehydrogenase
RA	1,647,178	A→G	5.7%	L74P (CTG→CCG) ‡	gcd ←	quinoprotein glucose dehydrogenase
RA	1,648,991	G→A	7.5%	intergenic (‑228/+68)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,648,994	C→A	7.4%	intergenic (‑231/+65)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,648,995	C→T	7.3%	intergenic (‑232/+64)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,648,999	T→A	7.4%	intergenic (‑236/+60)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,001	C→G	9.0%	intergenic (‑238/+58)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,002	C→G	7.5%	intergenic (‑239/+57)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,004	T→A	8.9%	intergenic (‑241/+55)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,008	A→G	6.9%	intergenic (‑245/+51)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,009	T→G	6.9%	intergenic (‑246/+50)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,012	T→C	7.0%	intergenic (‑249/+47)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,375	T→G	5.2%	E576A (GAG→GCG) ‡	PP_1446 ←	TonB‑dependent receptor
RA	1,649,376	C→A	5.2%	E576* (GAG→TAG) ‡	PP_1446 ←	TonB‑dependent receptor
RA	1,661,519	C→A	8.2%	A50D (GCC→GAC)	PP_1456 →	membrane protein
RA	1,661,522	T→A	7.6%	L51Q (CTG→CAG)	PP_1456 →	membrane protein
RA	1,661,525	T→G	7.6%	V52G (GTC→GGC)	PP_1456 →	membrane protein
RA	1,663,117	A→T	9.0%	intergenic (+21/+17)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,663,118	A→T	8.3%	intergenic (+22/+16)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,663,119	A→T	8.5%	intergenic (+23/+15)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,665,704	A→T	5.6%	L69Q (CTG→CAG)	PP_1459 ←	CBS domain‑containing protein
RA	1,665,707	C→T	5.7%	C68Y (TGC→TAC) ‡	PP_1459 ←	CBS domain‑containing protein
RA	1,665,708	A→G	5.1%	C68R (TGC→CGC) ‡	PP_1459 ←	CBS domain‑containing protein
RA	1,665,716	C→G	5.1%	G65A (GGG→GCG)	PP_1459 ←	CBS domain‑containing protein
RA	1,670,669	T→G	5.3%	intergenic (+50/‑45)	rplS → / → PP_1466	50S ribosomal protein L19/acyl‑CoA thioesterase
RA	1,684,314	T→C	6.4%	F284S (TTT→TCT)	PP_1478 →	xenobiotic reductase
RA	1,684,319	G→A	6.6%	E286K (GAG→AAG)	PP_1478 →	xenobiotic reductase
RA	1,691,814	T→C	5.2%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,815	C→G	5.1%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,825	C→A	9.7%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	10.1%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,693,832	C→A	9.4%	R87S (CGC→AGC) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,834	C→G	9.6%	R87R (CGC→CGG) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,703,290	A→G	28.6%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	27.3%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294	C→T	27.8%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,321	G→A	8.9%	intergenic (+128/‑39)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,326	A→G	7.6%	intergenic (+133/‑34)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,328	C→T	6.7%	intergenic (+135/‑32)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,704,678	T→A	7.7%	M1M (TTG→ATG) †‡	PP_1499 →	hypothetical protein
RA	1,704,679	T→A	7.2%	M1* (TTG→TAG) †‡	PP_1499 →	hypothetical protein
RA	1,707,269	G→C	9.7%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,272	G→C	9.6%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,330:1	+A	6.1%	intergenic (+106/+36)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,335	Δ1 bp	5.9%	intergenic (+111/+31)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,346	G→T	5.1%	intergenic (+122/+20)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,712,993	T→A	10.2%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	10.1%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,728,698	A→G	6.7%	intergenic (+50/+73)	cspA‑I → / ← PP_1523	major cold shock protein/hypothetical protein
RA	1,728,699	C→T	5.2%	intergenic (+51/+72)	cspA‑I → / ← PP_1523	major cold shock protein/hypothetical protein
RA	1,734,927	G→A	8.4%	intergenic (+87/+26)	tcdA → / ← PP_1528	tRNA cyclic N6‑threonylcarbamoyladenosine(37) synthase TcdA/hypothetical protein
RA	1,750,775	C→G	5.7%	A31G (GCC→GGC)	PP_1551 →	replication protein O
RA	1,780,128	T→A	17.2%	intergenic (+45/+61)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,137	C→T	9.9%	intergenic (+54/+52)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,139	T→C	8.5%	intergenic (+56/+50)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,140	G→A	8.6%	intergenic (+57/+49)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,143	A→C	8.5%	intergenic (+60/+46)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,144	T→G	8.0%	intergenic (+61/+45)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,151	T→A	14.3%	intergenic (+68/+38)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,786,064	T→A	5.9%	intergenic (+38/‑148)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,065	T→A	5.5%	intergenic (+39/‑147)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,066	T→A	5.2%	intergenic (+40/‑146)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,797,386	G→C	6.7%	K15N (AAG→AAC)	lpxA →	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
RA	1,797,387	C→T	6.7%	L16L (CTG→TTG)	lpxA →	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
RA	1,808,650	C→G	5.8%	T220S (ACT→AGT)	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,810,377	T→G	12.1%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	8.2%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,825,133	G→C	5.4%	R55G (CGC→GGC)	mutS ←	DNA mismatch repair protein MutS
JC	1,843,225	(TGGCGCGCCAGTTCG)1→2	94.6%	coding (1611/2754 nt)	gacS ←	sensor protein GacS
RA	1,853,240	T→A	5.2%	intergenic (+43/‑81)	relA → / → mazG	ATP:GTP 3'‑pyrophosphotransferase/modified nucleoside triphosphate pyrophosphohydrolase
RA	1,859,162	C→G	5.2%	intergenic (+40/+61)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,168	T→C	5.7%	intergenic (+46/+55)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,169	T→G	5.1%	intergenic (+47/+54)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,569	A→C	5.5%	intergenic (‑119/+37)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,571	T→A	5.6%	intergenic (‑121/+35)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,573	G→T	5.4%	intergenic (‑123/+33)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,860,748	C→T	7.0%	M77I (ATG→ATA) ‡	purN ←	phosphoribosylglycinamide formyltransferase
RA	1,860,750	T→A	6.5%	M77L (ATG→TTG) ‡	purN ←	phosphoribosylglycinamide formyltransferase
RA	1,860,752	A→G	6.8%	L76P (CTA→CCA)	purN ←	phosphoribosylglycinamide formyltransferase
RA	1,889,400	C→A	5.4%	L305L (CTG→CTT) ‡	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,889,401	A→T	5.7%	L305Q (CTG→CAG) ‡	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,889,404	A→T	5.7%	M304K (ATG→AAG) ‡	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,889,405	T→G	5.6%	M304L (ATG→CTG) ‡	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,897,245	G→T	7.5%	intergenic (‑56/+88)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,249	T→A	7.5%	intergenic (‑60/+84)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,253	A→C	8.2%	intergenic (‑64/+80)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,918,298	C→G	7.2%	intergenic (‑32/+86)	PP_1718 ← / ← prc	EAL domain‑containing diguanylate phosphodiesterase/tail‑specific protease Prc
RA	1,918,299	T→C	7.2%	intergenic (‑33/+85)	PP_1718 ← / ← prc	EAL domain‑containing diguanylate phosphodiesterase/tail‑specific protease Prc
RA	1,918,300	G→A	7.2%	intergenic (‑34/+84)	PP_1718 ← / ← prc	EAL domain‑containing diguanylate phosphodiesterase/tail‑specific protease Prc
RA	1,918,301	C→G	7.1%	intergenic (‑35/+83)	PP_1718 ← / ← prc	EAL domain‑containing diguanylate phosphodiesterase/tail‑specific protease Prc
RA	1,921,591	T→A	23.1%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	23.2%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,942,409	T→A	5.7%	intergenic (+44/‑161)	betX → / → yjcH	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX/inner membrane protein
RA	1,942,412	T→C	5.3%	intergenic (+47/‑158)	betX → / → yjcH	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX/inner membrane protein
RA	1,942,415	G→A	5.4%	intergenic (+50/‑155)	betX → / → yjcH	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX/inner membrane protein
RA	1,942,418	T→A	5.3%	intergenic (+53/‑152)	betX → / → yjcH	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX/inner membrane protein
RA	1,944,572	C→A	5.7%	intergenic (+30/+232)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,944,573	T→C	5.7%	intergenic (+31/+231)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,944,574	T→A	5.7%	intergenic (+32/+230)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,944,575	G→A	5.7%	intergenic (+33/+229)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,944,576	T→G	5.8%	intergenic (+34/+228)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,955,252	T→A	6.6%	intergenic (+39/‑154)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,253	T→A	6.6%	intergenic (+40/‑153)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,263	A→G	6.2%	intergenic (+50/‑143)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,264	G→C	5.1%	intergenic (+51/‑142)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,267	T→C	5.0%	intergenic (+54/‑139)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,967,040	C→G	5.3%	T218S (ACC→AGC) ‡	PP_1762 →	hypothetical protein
RA	1,967,041	C→G	5.0%	T218T (ACC→ACG) ‡	PP_1762 →	hypothetical protein
RA	1,967,042	C→G	5.3%	L219V (CTG→GTG)	PP_1762 →	hypothetical protein
RA	1,967,221	A→C	10.6%	intergenic (+48/+71)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,222	T→A	9.3%	intergenic (+49/+70)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,223	C→G	9.1%	intergenic (+50/+69)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,224	A→G	9.4%	intergenic (+51/+68)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,225	C→G	8.1%	intergenic (+52/+67)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,231	C→T	8.0%	intergenic (+58/+61)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,235	C→T	7.0%	intergenic (+62/+57)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,236	A→G	7.1%	intergenic (+63/+56)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,240	A→G	6.6%	intergenic (+67/+52)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,246	C→G	6.5%	intergenic (+73/+46)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,247	C→T	6.7%	intergenic (+74/+45)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,248	C→G	6.7%	intergenic (+75/+44)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,249	T→A	6.6%	intergenic (+76/+43)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,250	G→T	6.3%	intergenic (+77/+42)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,978,751	C→G	8.2%	F45L (TTC→TTG)	cmk →	cytidylate kinase
RA	1,981,135	T→G	7.0%	intergenic (+31/‑269)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,981,136	C→A	6.9%	intergenic (+32/‑268)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,981,203	T→C	5.1%	intergenic (+99/‑201)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,993,645	G→T	7.6%	intergenic (+40/+58)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,993,646	C→G	7.6%	intergenic (+41/+57)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,993,647	A→C	7.6%	intergenic (+42/+56)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	2,025,756	A→C	5.4%	Q238P (CAG→CCG) ‡	wbpZ →	glycosyl transferase
RA	2,025,757	G→T	5.4%	Q238H (CAG→CAT) ‡	wbpZ →	glycosyl transferase
RA	2,034,835	C→T	6.1%	intergenic (+608/+39)	pgi‑I → / ← SBRG_xylD	glucose 6‑phosphate isomerase/xylose dehydratase
RA	2,034,836	G→T	5.9%	intergenic (+609/+38)	pgi‑I → / ← SBRG_xylD	glucose 6‑phosphate isomerase/xylose dehydratase
RA	2,034,837	A→C	6.4%	intergenic (+610/+37)	pgi‑I → / ← SBRG_xylD	glucose 6‑phosphate isomerase/xylose dehydratase
RA	2,034,838	A→G	6.1%	intergenic (+611/+36)	pgi‑I → / ← SBRG_xylD	glucose 6‑phosphate isomerase/xylose dehydratase
RA	2,051,268	G→T	6.0%	intergenic (‑32/+28)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,051,269	A→C	6.0%	intergenic (‑33/+27)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,054,751	A→C	5.7%	intergenic (+18/+32)	prmB → / ← PP_1828	N5‑glutamine S‑adenosyl‑L‑methionine‑dependent methyltransferase/hypothetical protein
RA	2,055,583	T→C	7.2%	intergenic (‑18/+48)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,055,592	T→C	7.4%	intergenic (‑27/+39)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,055,594	T→A	7.1%	intergenic (‑29/+37)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,055,595	A→T	7.1%	intergenic (‑30/+36)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,055,596	T→A	7.1%	intergenic (‑31/+35)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,055,598	G→A	7.8%	intergenic (‑33/+33)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,055,607	G→A	6.8%	intergenic (‑42/+24)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,057,973:1	+A	5.2%	intergenic (+57/‑86)	aroC → / → PP_1831	chorismate synthase/membrane protein
RA	2,057,977	C→G	5.0%	intergenic (+61/‑82)	aroC → / → PP_1831	chorismate synthase/membrane protein
RA	2,059,764	G→T	6.0%	intergenic (+15/+113)	PP_1832 → / ← PP_1833	oxidase/hypothetical protein
RA	2,065,150	C→G	13.1%	intergenic (+42/‑165)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,157	C→A	13.3%	intergenic (+49/‑158)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,158	A→C	16.8%	intergenic (+50/‑157)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,159	T→C	17.3%	intergenic (+51/‑156)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,166	G→A	20.9%	intergenic (+58/‑149)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,170	T→C	19.7%	intergenic (+62/‑145)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,173	G→A	20.4%	intergenic (+65/‑142)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,177	T→C	21.3%	intergenic (+69/‑138)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,184	G→A	12.2%	intergenic (+76/‑131)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,185	G→T	13.0%	intergenic (+77/‑130)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,186	T→G	18.0%	intergenic (+78/‑129)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,193	C→G	8.8%	intergenic (+85/‑122)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,073,106	T→A	5.6%	intergenic (+93/+134)	PP_1846 → / ← PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
RA	2,073,107	G→C	5.5%	intergenic (+94/+133)	PP_1846 → / ← PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
RA	2,073,108	T→A	5.3%	intergenic (+95/+132)	PP_1846 → / ← PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
RA	2,084,246	T→A	5.3%	*318L (TAA→TTA)	PP_1861 ←	LysR family transcriptional regulator
RA	2,086,076	T→A	8.5%	intergenic (+15/+14)	PP_1862 → / ← PP_1863	membrane protein/LysR family transcriptional regulator
RA	2,086,077	T→A	8.0%	intergenic (+16/+13)	PP_1862 → / ← PP_1863	membrane protein/LysR family transcriptional regulator
RA	2,086,078	T→A	8.1%	intergenic (+17/+12)	PP_1862 → / ← PP_1863	membrane protein/LysR family transcriptional regulator
RA	2,089,298	C→G	6.3%	intergenic (+146/+772)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,089,299	C→G	6.3%	intergenic (+147/+771)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,094,345	G→A	8.1%	intergenic (+26/+65)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,094,347	T→C	8.0%	intergenic (+28/+63)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,094,350	G→A	7.9%	intergenic (+31/+60)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,094,352	T→C	8.3%	intergenic (+33/+58)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,106,867	G→C	5.8%	intergenic (‑19/+22)	PP_1879 ← / ← PP_1880	hypothetical protein/outer membrane autotransporter
RA	2,106,868	C→A	5.8%	intergenic (‑20/+21)	PP_1879 ← / ← PP_1880	hypothetical protein/outer membrane autotransporter
RA	2,106,871	T→G	5.5%	intergenic (‑23/+18)	PP_1879 ← / ← PP_1880	hypothetical protein/outer membrane autotransporter
RA	2,106,872	G→C	5.6%	intergenic (‑24/+17)	PP_1879 ← / ← PP_1880	hypothetical protein/outer membrane autotransporter
RA	2,136,236	A→C	8.2%	intergenic (‑37/+32)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,136,243	G→T	9.1%	intergenic (‑44/+25)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,141,587	T→G	5.7%	Q167H (CAA→CAC)	PP_5481 ←	hypothetical protein
RA	2,141,593	A→T	7.3%	R165R (CGT→CGA)	PP_5481 ←	hypothetical protein
RA	2,141,596	A→T	7.5%	R164R (CGT→CGA)	PP_5481 ←	hypothetical protein
RA	2,141,602	C→A	5.6%	Q162H (CAG→CAT)	PP_5481 ←	hypothetical protein
RA	2,149,173	T→G	13.7%	intergenic (+81/+36)	murB → / ← rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
RA	2,149,174	T→C	13.2%	intergenic (+82/+35)	murB → / ← rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
RA	2,149,175	G→A	13.0%	intergenic (+83/+34)	murB → / ← rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
RA	2,149,176	C→A	12.7%	intergenic (+84/+33)	murB → / ← rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
RA	2,149,849	G→T	5.1%	A879D (GCC→GAC)	rne ←	ribonuclease E
RA	2,152,573	G→C	5.4%	noncoding (291/373 nt)	PP_mr28 ←	rne‑II regulatory region
RA	2,158,620	T→A	5.3%	intergenic (+86/‑42)	plsX → / → fabD	phosphate acyltransferase/malonyl‑CoA‑ACP transacylase
RA	2,173,633	G→A	5.7%	intergenic (+203/+200)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,757	T→A	6.6%	intergenic (+327/+76)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,761	A→G	6.6%	intergenic (+331/+72)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,765	G→T	7.0%	intergenic (+335/+68)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,769	A→G	6.8%	intergenic (+339/+64)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,770	C→T	6.8%	intergenic (+340/+63)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,774	A→C	7.6%	intergenic (+344/+59)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,778	C→T	6.9%	intergenic (+348/+55)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,782	T→A	5.5%	intergenic (+352/+51)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,238,321	C→T	5.0%	D489D (GAC→GAT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,330	G→T	6.2%	L492L (CTG→CTT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,334	A→G	5.8%	T494A (ACC→GCC) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,336	C→T	5.8%	T494T (ACC→ACT) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,342	C→T	6.7%	D496D (GAC→GAT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,345	G→A	6.7%	V497V (GTG→GTA)	uvrB →	uvrABC excinuclease protein B
RA	2,238,346	C→T	6.8%	L498L (CTG→TTG)	uvrB →	uvrABC excinuclease protein B
RA	2,238,354	C→T	7.1%	G500G (GGC→GGT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,375	C→T	6.6%	G507G (GGC→GGT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,378	G→C	6.5%	L508L (CTG→CTC)	uvrB →	uvrABC excinuclease protein B
RA	2,238,381	C→T	6.5%	D509D (GAC→GAT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,384	G→T	6.9%	M510I (ATG→ATT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,387	C→G	6.9%	P511P (CCC→CCG)	uvrB →	uvrABC excinuclease protein B
RA	2,238,390	Δ1 bp	7.2%	coding (1536/2016 nt)	uvrB →	uvrABC excinuclease protein B
RA	2,238,391	G→A	7.2%	V513M (GTG→ATG)	uvrB →	uvrABC excinuclease protein B
RA	2,238,394	T→C	7.2%	S514P (TCG→CCG) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,395	C→G	7.2%	S514W (TCG→TGG) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,396:1	+T	7.2%	coding (1542/2016 nt)	uvrB →	uvrABC excinuclease protein B
RA	2,238,397	C→T	7.1%	L515L (CTG→TTG) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,399	G→C	7.3%	L515L (CTG→CTC) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,402	G→C	7.3%	V516V (GTG→GTC)	uvrB →	uvrABC excinuclease protein B
RA	2,238,408	C→T	7.6%	I518I (ATC→ATT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,411	C→G	6.6%	L519L (CTC→CTG)	uvrB →	uvrABC excinuclease protein B
RA	2,238,417	G→C	6.6%	A521A (GCG→GCC)	uvrB →	uvrABC excinuclease protein B
RA	2,243,256	C→G	12.5%	intergenic (+38/‑243)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,243,269	G→T	14.1%	intergenic (+51/‑230)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,253,207	C→A	5.0%	A191A (GCC→GCA)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,208	G→A	5.0%	V192M (GTG→ATG) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,210	G→C	5.2%	V192V (GTG→GTC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,217	A→G	5.0%	K195E (AAG→GAG)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,222	C→T	5.2%	I196I (ATC→ATT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,228	C→G	5.3%	T198T (ACC→ACG)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,231	C→T	5.3%	A199A (GCC→GCT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,234	T→C	5.1%	G200G (GGT→GGC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,239	A→C	5.4%	N202T (AAC→ACC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,240	C→A	5.3%	N202K (AAC→AAA) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,243	T→C	5.8%	G203G (GGT→GGC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,244	C→T	5.4%	H204Y (CAC→TAC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,246	C→T	5.4%	H204H (CAC→CAT) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,248	C→T	5.5%	A205V (GCC→GTC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,249	C→G	5.5%	A205A (GCC→GCG) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,252	G→C	5.4%	M206I (ATG→ATC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,257	T→A	5.4%	F208Y (TTC→TAC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,258	C→T	5.4%	F208F (TTC→TTT) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,261	A→T	5.8%	A209A (GCA→GCT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,267	T→C	5.6%	S211S (AGT→AGC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,277	G→T	5.5%	E215* (GAA→TAA) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,278	A→C	5.6%	E215A (GAA→GCA) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,279	A→G	5.5%	E215E (GAA→GAG) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,280	T→C	5.6%	L216L (TTG→CTG)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,273,893	T→C	5.2%	intergenic (+136/‑6)	PP_t33 → / → PP_t34	tRNA‑Asp/tRNA‑Asp
RA	2,275,017	A→G	7.9%	intergenic (+17/+274)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,275,027	C→G	15.7%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,275,031	A→T	15.4%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,275,035	C→G	15.5%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,275,045	C→T	7.2%	intergenic (+45/+246)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,284,695	T→C	10.9%	intergenic (‑122/+107)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,702	T→G	15.9%	intergenic (‑129/+100)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,735	T→G	36.1%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,739	G→C	32.0%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,740	G→C	32.2%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,744	C→A	32.2%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,302,373	A→C	5.3%	W317G (TGG→GGG)	sbcD ←	exonuclease subunit SbcD
RA	2,310,595	T→G	5.8%	N147T (AAC→ACC) ‡	PP_2031 ←	hypothetical protein
RA	2,310,596	T→C	5.4%	N147D (AAC→GAC) ‡	PP_2031 ←	hypothetical protein
RA	2,310,598	T→A	5.2%	D146V (GAC→GTC)	PP_2031 ←	hypothetical protein
RA	2,310,600	G→A	5.2%	G145G (GGC→GGT) ‡	PP_2031 ←	hypothetical protein
RA	2,310,601	C→A	5.3%	G145V (GGC→GTC) ‡	PP_2031 ←	hypothetical protein
RA	2,315,006	G→C	5.1%	A349A (GCC→GCG)	benE‑I ←	benzoate transport protein
RA	2,315,009	G→C	5.2%	S348R (AGC→AGG)	benE‑I ←	benzoate transport protein
RA	2,320,626	A→G	5.7%	A301A (GCA→GCG)	PP_2039 →	acyl‑CoA dehydrogenase
RA	2,320,627	C→T	5.0%	R302C (CGC→TGC)	PP_2039 →	acyl‑CoA dehydrogenase
RA	2,342,668	A→C	6.5%	intergenic (+37/‑78)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,342,672	G→A	5.8%	intergenic (+41/‑74)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,342,673	T→A	5.8%	intergenic (+42/‑73)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,342,674	T→C	5.9%	intergenic (+43/‑72)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,342,678	G→T	5.4%	intergenic (+47/‑68)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,383,367	T→G	6.3%	intergenic (+31/+56)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,383,368	C→A	6.0%	intergenic (+32/+55)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,391,106	T→C	5.5%	M1T (ATG→ACG) †	rlmKL →	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
RA	2,391,109	G→A	5.4%	R2H (CGT→CAT)	rlmKL →	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
RA	2,397,548	G→C	6.8%	intergenic (‑191/+52)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,397,550	A→T	7.5%	intergenic (‑193/+50)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,397,552	G→C	6.7%	intergenic (‑195/+48)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,424,904	A→G	5.2%	*409W (TGA→TGG)  S413P (TCA→CCA)	moeA → PP_2124 ←	molybdenum::molybdopterin ligase glycosyl transferase
RA	2,424,907	G→C	5.2%	R412G (CGC→GGC)	PP_2124 ←	glycosyl transferase
RA	2,444,638	A→C	5.3%	K604T (AAG→ACG)	topA →	DNA topoisomerase I
RA	2,446,380	A→C	10.3%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,446,384	G→T	10.6%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,446,385	A→C	10.3%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,446,389	G→T	10.4%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,458,825	A→G	12.2%	intergenic (+111/‑70)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,458,826	T→G	12.5%	intergenic (+112/‑69)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,458,827	T→C	9.5%	intergenic (+113/‑68)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,458,829	T→G	10.4%	intergenic (+115/‑66)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,458,832	C→A	9.2%	intergenic (+118/‑63)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,458,834	G→A	10.8%	intergenic (+120/‑61)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,458,835	C→A	10.8%	intergenic (+121/‑60)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,458,836	C→T	9.4%	intergenic (+122/‑59)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,460,058	G→A	5.1%	intergenic (+165/‑40)	PP_2150 → / → sthA	thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase
RA	2,460,072	T→C	5.0%	intergenic (+179/‑26)	PP_2150 → / → sthA	thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase
RA	2,470,226	G→C	5.4%	intergenic (‑25/+98)	PP_2161 ← / ← PP_2162	hypothetical protein/phosphonoacetaldehyde phosphonohydrolase‑like protein
RA	2,476,106	C→T	14.5%	intergenic (‑46/+134)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,108	T→C	17.8%	intergenic (‑48/+132)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,113	T→C	17.1%	intergenic (‑53/+127)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,114	C→T	16.2%	intergenic (‑54/+126)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,119	A→G	16.8%	intergenic (‑59/+121)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,120	G→A	17.8%	intergenic (‑60/+120)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,125	G→A	15.7%	intergenic (‑65/+115)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,127	A→G	13.3%	intergenic (‑67/+113)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
JC	2,480,371	Δ3 bp	5.7%	coding (103‑105/444 nt)	PP_2172 →	hypothetical protein
RA	2,482,742	G→A	7.0%	R190R (CGC→CGT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,750	G→C	6.9%	Q188E (CAG→GAG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,754	G→A	7.1%	T186T (ACC→ACT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,781	G→C	7.7%	P177P (CCC→CCG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,784	G→C	8.2%	L176L (CTC→CTG) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,786	G→A	8.2%	L176F (CTC→TTC) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,787	G→A	8.2%	V175V (GTC→GTT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,790	G→A	8.1%	N174N (AAC→AAT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,796	G→C	8.1%	I172M (ATC→ATG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,799	C→G	7.1%	R171S (AGG→AGC) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,801	T→G	6.7%	R171R (AGG→CGG) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,802	C→A	6.5%	V170V (GTG→GTT) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,804	C→T	6.4%	V170M (GTG→ATG) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,811	C→G	5.7%	G167G (GGG→GGC) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,812	C→G	5.7%	G167A (GGG→GCG) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,813	C→G	5.7%	G167R (GGG→CGG) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,814	G→T	5.6%	A166A (GCC→GCA)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,817	G→A	5.4%	F165F (TTC→TTT) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,818	A→T	5.5%	F165Y (TTC→TAC) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,820	T→A	5.5%	Q164H (CAA→CAT) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,821	T→G	5.4%	Q164P (CAA→CCA) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,822	G→T	5.5%	Q164K (CAA→AAA) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,829	G→A	5.7%	F161F (TTC→TTT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,832	G→T	5.7%	I160I (ATC→ATA) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,834	T→C	5.7%	I160V (ATC→GTC) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,835	T→C	5.7%	K159K (AAA→AAG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,838	G→C	5.8%	T158T (ACC→ACG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,844	T→A	5.7%	A156A (GCA→GCT) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,846	C→A	5.7%	A156S (GCA→TCA) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,850	C→G	5.6%	L154L (CTG→CTC)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,856	C→T	5.9%	S152S (TCG→TCA) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,858	A→C	5.6%	S152A (TCG→GCG) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,868	T→C	5.9%	A148A (GCA→GCG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,871	A→C	5.9%	S147S (TCT→TCG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,506,699	T→A	6.5%	L174Q (CTG→CAG)	yliI →	aldose sugar dehydrogenase
RA	2,506,705:1	+T	5.3%	coding (527/1146 nt)	yliI →	aldose sugar dehydrogenase
RA	2,530,993	G→C	8.3%	intergenic (+155/‑252)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,530,994	G→C	8.3%	intergenic (+156/‑251)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,548,788	T→C	8.3%	intergenic (+22/+18)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,548,791	G→A	8.3%	intergenic (+25/+15)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,557,932	C→T	5.1%	intergenic (+67/+144)	PP_2240 → / ← PP_2241	ABC transporter permease/ATP‑binding protein/MFS transporter
RA	2,562,429	G→C	6.6%	W142C (TGG→TGC)	PP_2243 →	hypothetical protein
RA	2,569,046	Δ1 bp	5.2%	coding (847/879 nt)	PP_2250 ←	LysR family transcriptional regulator
RA	2,569,050:1	+C	5.5%	coding (843/879 nt)	PP_2250 ←	LysR family transcriptional regulator
RA	2,584,394	T→G	5.2%	F261V (TTC→GTC)	PP_2263 →	sugar ABC transporter permease
RA	2,586,575	G→T	9.0%	intergenic (+97/+30)	PP_2264 → / ← folD‑II	sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
RA	2,586,576	C→T	8.3%	intergenic (+98/+29)	PP_2264 → / ← folD‑II	sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
RA	2,586,577	A→G	8.4%	intergenic (+99/+28)	PP_2264 → / ← folD‑II	sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
RA	2,586,578	A→C	8.5%	intergenic (+100/+27)	PP_2264 → / ← folD‑II	sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
RA	2,595,067	C→T	6.0%	R433C (CGC→TGC) ‡	PP_2270 →	DNA primase/helicase
RA	2,595,069	C→G	5.9%	R433R (CGC→CGG) ‡	PP_2270 →	DNA primase/helicase
RA	2,595,071	A→G	6.0%	Q434R (CAA→CGA)	PP_2270 →	DNA primase/helicase
RA	2,630,153	A→T	5.2%	K425* (AAG→TAG)	tig →	trigger factor
RA	2,630,351	A→C	6.2%	A16A (GCA→GCC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,630,352	G→T	7.0%	G17C (GGC→TGC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,637,546	C→T	5.4%	L331L (CTG→CTA) ‡	PP_2305 ←	hypothetical protein
RA	2,637,547	A→G	5.4%	L331P (CTG→CCG) ‡	PP_2305 ←	hypothetical protein
RA	2,653,241	G→C	9.4%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,668,710	A→T	6.7%	intergenic (+19/‑47)	acnA‑II → / → prpF	aconitate hydratase/aconitate isomerase
RA	2,668,711	A→T	7.6%	intergenic (+20/‑46)	acnA‑II → / → prpF	aconitate hydratase/aconitate isomerase
RA	2,668,712	A→T	6.8%	intergenic (+21/‑45)	acnA‑II → / → prpF	aconitate hydratase/aconitate isomerase
RA	2,670,018	T→G	16.1%	intergenic (+71/‑96)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,019:1	+T	13.4%	intergenic (+72/‑95)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,027	G→C	13.7%	intergenic (+80/‑87)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,028	G→A	14.8%	intergenic (+81/‑86)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,031	T→C	13.7%	intergenic (+84/‑83)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,032	G→A	13.4%	intergenic (+85/‑82)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,035	T→C	14.2%	intergenic (+88/‑79)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,036	G→C	13.9%	intergenic (+89/‑78)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,044	Δ1 bp	12.1%	intergenic (+97/‑70)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,046	C→A	19.6%	intergenic (+99/‑68)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,671,636	T→G	6.3%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,671,639	C→A	6.2%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,675,147	A→C	5.6%	M166L (ATG→CTG)	PP_2340 →	hypothetical protein
RA	2,713,583	G→A	6.0%	T1162T (ACC→ACT) ‡	metH ←	cobalamin‑dependent methionine synthase
RA	2,713,584	G→C	6.5%	T1162S (ACC→AGC) ‡	metH ←	cobalamin‑dependent methionine synthase
RA	2,713,585	T→C	6.4%	T1162A (ACC→GCC) ‡	metH ←	cobalamin‑dependent methionine synthase
RA	2,721,220	Δ1 bp	5.2%	coding (382/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,721,228:1	+T	5.0%	coding (390/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,755,531	A→G	5.1%	S375G (AGC→GGC)	czcB‑II →	cobalt‑zinc‑cadmium resistance protein
RA	2,755,538	T→A	7.9%	L377Q (CTG→CAG)	czcB‑II →	cobalt‑zinc‑cadmium resistance protein
RA	2,755,545	C→T	8.9%	A379A (GCC→GCT)	czcB‑II →	cobalt‑zinc‑cadmium resistance protein
RA	2,758,801	A→C	7.6%	intergenic (+15/+18)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,758,802	A→T	7.5%	intergenic (+16/+17)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,758,803	G→T	7.5%	intergenic (+17/+16)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,764,941	T→G	5.0%	Q312P (CAG→CCG)	PP_2417 ←	iron ABC transporter permease
RA	2,764,943	G→C	5.1%	G311G (GGC→GGG)	PP_2417 ←	iron ABC transporter permease
RA	2,778,965	C→G	5.3%	A169P (GCA→CCA)	PP_2429 ←	membrane protein
RA	2,778,972	C→G	5.1%	W166C (TGG→TGC)	PP_2429 ←	membrane protein
RA	2,795,717	G→T	8.8%	intergenic (+61/+66)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,720	A→C	8.4%	intergenic (+64/+63)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,721	C→A	7.8%	intergenic (+65/+62)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,722	T→G	7.3%	intergenic (+66/+61)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,723	G→T	8.2%	intergenic (+67/+60)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,726	A→C	8.3%	intergenic (+70/+57)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,798,801	G→T	5.4%	intergenic (+20/‑112)	PP_t43 → / → PP_2449	tRNA‑Val/hypothetical protein
RA	2,798,802	A→T	5.3%	intergenic (+21/‑111)	PP_t43 → / → PP_2449	tRNA‑Val/hypothetical protein
RA	2,798,803	A→T	5.3%	intergenic (+22/‑110)	PP_t43 → / → PP_2449	tRNA‑Val/hypothetical protein
RA	2,798,804	A→C	5.6%	intergenic (+23/‑109)	PP_t43 → / → PP_2449	tRNA‑Val/hypothetical protein
RA	2,801,136	A→G	5.7%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,801,142	C→T	5.3%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,801,145	A→G	5.3%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,804,956	A→C	5.6%	K459Q (AAG→CAG) ‡	rbsA‑I →	ribose ABC transporter ‑ ATP‑binding subunit
RA	2,804,957	A→T	5.8%	K459M (AAG→ATG) ‡	rbsA‑I →	ribose ABC transporter ‑ ATP‑binding subunit
RA	2,804,958	G→T	5.8%	K459N (AAG→AAT) ‡	rbsA‑I →	ribose ABC transporter ‑ ATP‑binding subunit
RA	2,810,425	A→T	6.5%	intergenic (+86/+66)	PP_2462 → / ← PP_mr35	hypothetical protein/cspA regulatory region
RA	2,810,426	A→T	6.5%	intergenic (+87/+65)	PP_2462 → / ← PP_mr35	hypothetical protein/cspA regulatory region
RA	2,810,427	A→T	6.5%	intergenic (+88/+64)	PP_2462 → / ← PP_mr35	hypothetical protein/cspA regulatory region
RA	2,824,860	G→C	8.1%	A156A (GCG→GCC)	curA →	NADPH‑dependent curcumin/dihydrocurcumin reductase
RA	2,824,863	G→C	8.1%	A157A (GCG→GCC)	curA →	NADPH‑dependent curcumin/dihydrocurcumin reductase
RA	2,828,795	G→C	5.3%	W81C (TGG→TGC)	PP_2479 →	cytochrome c family protein
RA	2,846,640	T→C	6.2%	intergenic (‑35/+45)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,846,643	A→T	6.2%	intergenic (‑38/+42)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,846,644	A→T	6.2%	intergenic (‑39/+41)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,846,647	A→T	6.0%	intergenic (‑42/+38)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,846,648	A→T	6.0%	intergenic (‑43/+37)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,846,651	G→A	6.2%	intergenic (‑46/+34)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,953,299	G→C	21.4%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,953,306	A→C	22.9%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,953,307	G→T	24.3%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,953,314	G→C	22.2%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,956,619:1	+C	8.8%	intergenic (‑157/‑124)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
RA	2,956,623	A→G	9.5%	intergenic (‑161/‑120)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
RA	2,956,626	C→A	10.4%	intergenic (‑164/‑117)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
RA	2,956,627	A→G	9.6%	intergenic (‑165/‑116)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
RA	2,956,629	C→G	9.7%	intergenic (‑167/‑114)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
RA	2,956,631	C→T	8.9%	intergenic (‑169/‑112)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
RA	2,956,632	T→G	8.8%	intergenic (‑170/‑111)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
RA	2,956,635	C→T	9.0%	intergenic (‑173/‑108)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
RA	2,956,638	Δ1 bp	8.9%	intergenic (‑176/‑105)	PP_2586 ← / → PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
JC	2,959,046	Δ84 bp	11.7%	intergenic (+36/‑77)	PP_2588 → / → PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
RA	2,960,755	T→C	17.6%	intergenic (+56/+86)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,960,764	G→C	16.7%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,960,765	T→C	17.5%	intergenic (+66/+76)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,960,768	G→C	17.1%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,960,771	G→A	18.3%	intergenic (+72/+70)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,960,772	G→C	18.3%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,960,781	G→A	16.1%	intergenic (+82/+60)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,960,798	G→A	5.2%	intergenic (+99/+43)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,982,957	C→G	7.4%	G458A (GGC→GCC)	PP_2607 ←	hypothetical protein
RA	3,000,893	T→C	5.9%	R20R (CGA→CGG)	PP_2622 ←	hypothetical protein
RA	3,008,433	T→G	7.9%	F1017V (TTC→GTC)	PP_2627 →	membrane protein
RA	3,008,438	G→T	7.4%	L1018L (CTG→CTT)	PP_2627 →	membrane protein
RA	3,008,439	A→C	7.0%	K1019Q (AAG→CAG)	PP_2627 →	membrane protein
RA	3,008,444	C→A	7.3%	D1020E (GAC→GAA)	PP_2627 →	membrane protein
RA	3,032,378	C→G	5.3%	intergenic (+413/‑281)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,032,382	G→C	5.7%	intergenic (+417/‑277)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,032,385	G→C	5.7%	intergenic (+420/‑274)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,032,684	C→T	5.5%	P9L (CCG→CTG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,032,687	A→G	5.2%	Q10R (CAG→CGG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,050,569	G→T	10.8%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,050,570	A→C	14.9%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,052,698	G→T	5.3%	A189S (GCA→TCA)	PP_2663 →	hypothetical protein
RA	3,053,803	T→A	6.4%	Y180N (TAC→AAC) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,053,804	A→G	6.2%	Y180C (TAC→TGC) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,053,809	C→T	6.2%	L182L (CTG→TTG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,053,810	T→A	6.2%	L182Q (CTG→CAG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,055,188	T→C	6.5%	intergenic (+24/+22)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,058,923:1	+A	7.6%	coding (390/990 nt)	PP_2669 ←	outer membrane protein
RA	3,058,928	Δ1 bp	7.4%	coding (385/990 nt)	PP_2669 ←	outer membrane protein
RA	3,071,254	C→T	5.7%	R126R (CGC→CGT)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,267	T→G	6.0%	C131G (TGC→GGC) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,268	G→C	6.0%	C131S (TGC→TCC) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,269	C→A	6.2%	C131* (TGC→TGA) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,275	C→T	5.8%	R133R (CGC→CGT)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,278	C→G	5.9%	A134A (GCC→GCG)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,284	G→A	6.2%	E136E (GAG→GAA)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,290	C→T	6.0%	G138G (GGC→GGT)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,291	G→A	5.9%	V139I (GTA→ATA) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,293	A→T	5.9%	V139V (GTA→GTT) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,294	G→T	5.9%	G140C (GGC→TGC) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,295	G→C	5.9%	G140A (GGC→GCC) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,296	C→G	6.2%	G140G (GGC→GGG) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,299	G→A	6.6%	E141E (GAG→GAA)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,303	A→G	6.3%	N143D (AAC→GAC)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,306	G→C	6.4%	E144Q (GAA→CAA) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,308	A→C	6.4%	E144D (GAA→GAC) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,310	G→A	6.3%	G145D (GGC→GAC) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,311	C→T	6.2%	G145G (GGC→GGT) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,314	C→G	6.1%	T146T (ACC→ACG)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,317	G→T	6.1%	V147V (GTG→GTT)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,320	T→G	6.2%	A148A (GCT→GCG)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,326	C→T	6.1%	H150H (CAC→CAT)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,327	A→T	6.1%	I151F (ATT→TTT) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,329	T→C	6.1%	I151I (ATT→ATC) ‡	aldB‑II →	aldehyde dehydrogenase
RA	3,071,335	G→A	6.0%	E153E (GAG→GAA)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,341	G→C	5.8%	L155L (CTG→CTC)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,347	G→T	6.1%	V157V (GTG→GTT)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,350	G→C	6.2%	V158V (GTG→GTC)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,353	G→C	5.8%	G159G (GGG→GGC)	aldB‑II →	aldehyde dehydrogenase
RA	3,071,365	G→C	5.9%	P163P (CCG→CCC)	aldB‑II →	aldehyde dehydrogenase
RA	3,072,446	T→C	5.1%	intergenic (+49/‑305)	aldB‑II → / → pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
RA	3,072,452	C→T	5.3%	intergenic (+55/‑299)	aldB‑II → / → pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
RA	3,072,453	A→G	5.2%	intergenic (+56/‑298)	aldB‑II → / → pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
RA	3,072,459	G→A	5.3%	intergenic (+62/‑292)	aldB‑II → / → pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
RA	3,072,461	T→C	5.3%	intergenic (+64/‑290)	aldB‑II → / → pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
RA	3,072,463	A→G	5.6%	intergenic (+66/‑288)	aldB‑II → / → pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
RA	3,072,464	A→T	5.6%	intergenic (+67/‑287)	aldB‑II → / → pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
RA	3,076,800	C→A	6.5%	A147A (GCC→GCA)	PP_2684 →	membrane protein
RA	3,078,060	C→A	5.6%	intergenic (‑43/+31)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,081,600	C→T	5.1%	intergenic (‑370/+64)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,105,384	C→T	5.5%	F202F (TTC→TTT)	PP_2713 →	two‑component system response regulator
RA	3,128,821	G→C	5.1%	A190G (GCC→GGC)	PP_2744 ←	ribose‑phosphate pyrophosphokinase family protein
RA	3,173,926	G→C	5.7%	R78P (CGG→CCG)	PP_2784 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,191,243	G→C	6.7%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,191,244	G→C	6.4%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,254,457	G→A	11.3%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,254,462	T→C	11.0%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,268,076	G→C	8.7%	intergenic (+28/+31)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,268,078	A→T	8.7%	intergenic (+30/+29)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,268,079	A→T	8.4%	intergenic (+31/+28)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,268,081	G→C	8.6%	intergenic (+33/+26)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,268,090	G→A	5.1%	intergenic (+42/+17)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,270,017	C→A	5.3%	H175N (CAC→AAC) ‡	azoR1 →	FMN‑dependent NADH‑azoreductase
RA	3,270,018	A→T	5.2%	H175L (CAC→CTC) ‡	azoR1 →	FMN‑dependent NADH‑azoreductase
RA	3,270,019	C→A	5.4%	H175Q (CAC→CAA) ‡	azoR1 →	FMN‑dependent NADH‑azoreductase
RA	3,270,024	T→A	5.4%	L177Q (CTG→CAG)	azoR1 →	FMN‑dependent NADH‑azoreductase
RA	3,270,029	T→G	5.7%	Y179D (TAT→GAT) ‡	azoR1 →	FMN‑dependent NADH‑azoreductase
RA	3,270,030	A→T	5.4%	Y179F (TAT→TTT) ‡	azoR1 →	FMN‑dependent NADH‑azoreductase
RA	3,270,031	T→G	5.2%	Y179* (TAT→TAG) ‡	azoR1 →	FMN‑dependent NADH‑azoreductase
RA	3,306,728	A→G	8.0%	intergenic (+16/+16)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,306,729	C→G	7.9%	intergenic (+17/+15)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,306,730	C→T	7.9%	intergenic (+18/+14)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,314,652	G→T	10.7%	intergenic (+28/‑134)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,314,653	T→A	9.6%	intergenic (+29/‑133)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,314,654	T→A	9.4%	intergenic (+30/‑132)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,314,655	A→C	9.6%	intergenic (+31/‑131)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,321,131	A→T	10.0%	intergenic (‑130/+62)	treSA ← / ← PP_2919	trehalose synthase A/LysR family transcriptional regulator
RA	3,342,544:1	+A	8.3%	coding (249/1587 nt)	ybiT ←	ABC‑F family ATPase
RA	3,342,549	Δ1 bp	8.4%	coding (244/1587 nt)	ybiT ←	ABC‑F family ATPase
RA	3,370,393	G→T	6.3%	P578P (CCG→CCT)	PP_2964 →	transposase
RA	3,370,395	C→G	5.8%	A579G (GCC→GGC)	PP_2964 →	transposase
RA	3,370,397	A→C	5.5%	R580R (AGG→CGG)	PP_2964 →	transposase
RA	3,398,871	C→A	6.0%	L206M (CTG→ATG) ‡	PP_3001 →	CAIB/BAIF family protein
RA	3,398,872	T→G	5.8%	L206R (CTG→CGG) ‡	PP_3001 →	CAIB/BAIF family protein
RA	3,400,868	C→G	5.1%	intergenic (+123/‑119)	aroQ‑III → / → PP_3004	type II 3‑dehydroquinate dehydratase/hypothetical protein
RA	3,404,470	C→T	5.1%	intergenic (+29/‑123)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,404,471	G→C	5.2%	intergenic (+30/‑122)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,404,476	G→C	5.2%	intergenic (+35/‑117)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,404,477	A→G	5.1%	intergenic (+36/‑116)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,420,484	G→A	6.6%	intergenic (‑108/+51)	prtN ← / ← PP_3032	transcriptional regulator PrtN/DNA‑binding protein Roi‑like protein
RA	3,420,487	T→C	6.6%	intergenic (‑111/+48)	prtN ← / ← PP_3032	transcriptional regulator PrtN/DNA‑binding protein Roi‑like protein
RA	3,424,775	C→T	6.3%	A323V (GCT→GTT) ‡	PP_3038 →	TraC domain‑containing protein
RA	3,424,776	T→A	6.3%	A323A (GCT→GCA) ‡	PP_3038 →	TraC domain‑containing protein
RA	3,424,777	A→G	6.2%	T324A (ACC→GCC)	PP_3038 →	TraC domain‑containing protein
RA	3,438,160	T→A	5.6%	W44R (TGG→AGG)	gpI →	tail formation protein
RA	3,449,256	T→G	12.1%	A19A (GCT→GCG)	PP_5556 →	bacteriophage lysis protein
RA	3,455,445	A→G	5.4%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,468,020	G→C	9.3%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,468,021	A→T	8.8%	noncoding (104/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,468,022	A→T	8.9%	noncoding (103/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,468,023	G→C	9.7%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,468,806	T→G	20.3%	intergenic (‑16/+108)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,501,002	G→C	5.8%	intergenic (‑184/+1016)	PP_5563 ← / ← PP_5565	membrane protein/hypothetical protein
RA	3,501,003	G→C	5.8%	intergenic (‑185/+1015)	PP_5563 ← / ← PP_5565	membrane protein/hypothetical protein
RA	3,536,727	T→G	5.5%	intergenic (+49/‑106)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,555,761	A→G	5.0%	S155G (AGC→GGC)	PP_3138 →	VirK domain‑containing protein
RA	3,555,762:1	+C	5.1%	coding (464/1002 nt)	PP_3138 →	VirK domain‑containing protein
RA	3,571,419	C→T	6.5%	intergenic (+13/+25)	PP_3150 → / ← sad‑II	hypothetical protein/NAD+‑dependent succinate semialdehyde dehydrogenase
RA	3,571,422	A→T	6.3%	intergenic (+16/+22)	PP_3150 → / ← sad‑II	hypothetical protein/NAD+‑dependent succinate semialdehyde dehydrogenase
RA	3,571,423	A→T	6.4%	intergenic (+17/+21)	PP_3150 → / ← sad‑II	hypothetical protein/NAD+‑dependent succinate semialdehyde dehydrogenase
RA	3,571,424	A→T	6.9%	intergenic (+18/+20)	PP_3150 → / ← sad‑II	hypothetical protein/NAD+‑dependent succinate semialdehyde dehydrogenase
RA	3,571,427	A→G	6.7%	intergenic (+21/+17)	PP_3150 → / ← sad‑II	hypothetical protein/NAD+‑dependent succinate semialdehyde dehydrogenase
RA	3,580,393	T→A	9.9%	intergenic (+105/‑219)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,580,394	T→A	8.1%	intergenic (+106/‑218)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,580,395	T→A	8.2%	intergenic (+107/‑217)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,580,396	T→A	7.5%	intergenic (+108/‑216)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,595,232	T→A	6.1%	R101R (CGT→CGA)	PP_3171 →	hypothetical protein
RA	3,595,233	A→T	6.4%	I102F (ATC→TTC) ‡	PP_3171 →	hypothetical protein
RA	3,595,234	T→A	6.0%	I102N (ATC→AAC) ‡	PP_3171 →	hypothetical protein
RA	3,616,030	A→G	5.8%	intergenic (+19/‑63)	PP_mr40 → / → pet	TPP regulatory region/protein Pet18
RA	3,616,032	T→A	5.7%	intergenic (+21/‑61)	PP_mr40 → / → pet	TPP regulatory region/protein Pet18
RA	3,616,034	C→T	5.6%	intergenic (+23/‑59)	PP_mr40 → / → pet	TPP regulatory region/protein Pet18
RA	3,616,687	A→C	6.0%	T199P (ACC→CCC) ‡	pet →	protein Pet18
RA	3,616,688	C→A	6.1%	T199N (ACC→AAC) ‡	pet →	protein Pet18
RA	3,616,691	T→G	5.9%	V200G (GTG→GGG) ‡	pet →	protein Pet18
RA	3,616,692	G→T	5.9%	V200V (GTG→GTT) ‡	pet →	protein Pet18
RA	3,626,109	G→C	5.8%	intergenic (‑92/+81)	PP_3194 ← / ← PP_3195	hypothetical protein/hypothetical protein
RA	3,626,767	A→C	12.9%	L229R (CTT→CGT)	PP_3195 ←	hypothetical protein
RA	3,646,913	C→T	5.1%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,646,916	A→G	5.1%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,661,871	C→G	7.1%	intergenic (‑41/+34)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,661,873	G→A	7.2%	intergenic (‑43/+32)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,661,874	T→C	7.2%	intergenic (‑44/+31)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,661,876	C→G	7.2%	intergenic (‑46/+29)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,690,145	G→T	5.6%	L99L (CTG→CTT)	PP_3253 →	carboxylate‑amine ligase
RA	3,690,152	A→C	5.2%	K102Q (AAG→CAG)	PP_3253 →	carboxylate‑amine ligase
RA	3,748,331	A→G	6.0%	Y551C (TAC→TGC)	paoC →	aromatic aldehyde dehydrogenase molybdopterin‑binding subunit
RA	3,748,334	T→C	5.8%	L552P (CTG→CCG)	paoC →	aromatic aldehyde dehydrogenase molybdopterin‑binding subunit
RA	3,755,560	G→T	6.0%	A96A (GCC→GCA)	PP_3316 ←	chaperone‑associated ATPase
RA	3,755,563	A→C	5.9%	V95V (GTT→GTG)	PP_3316 ←	chaperone‑associated ATPase
RA	3,764,907	A→T	9.4%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,764,912	A→T	9.6%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein
RA	3,765,467	A→G	6.7%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,765,469	G→C	6.6%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,765,471	C→T	6.5%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,778,338	T→G	10.5%	intergenic (+55/‑88)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,778,340	C→G	9.9%	intergenic (+57/‑86)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,778,358	G→C	11.2%	intergenic (+75/‑68)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,786,063	G→T	5.4%	R141L (CGC→CTC)	nikE →	nickel ABC transporter ATP‑binding protein
RA	3,786,066	C→G	5.5%	A142G (GCC→GGC)	nikE →	nickel ABC transporter ATP‑binding protein
RA	3,786,069	A→C	5.4%	E143A (GAG→GCG)	nikE →	nickel ABC transporter ATP‑binding protein
RA	3,786,073	T→G	5.5%	H144Q (CAT→CAG)	nikE →	nickel ABC transporter ATP‑binding protein
RA	3,792,656	C→G	5.0%	G45G (GGC→GGG)	PP_3353 →	sulfatase‑modifying protein
RA	3,795,857	A→T	7.1%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,795,862	A→T	7.8%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,798,390	G→A	6.4%	T10I (ACC→ATC) ‡	fcs ←	feruloyl‑CoA‑synthetase
RA	3,798,391	T→C	6.4%	T10A (ACC→GCC) ‡	fcs ←	feruloyl‑CoA‑synthetase
RA	3,800,669	A→T	5.6%	W66R (TGG→AGG)	PP_3358 ←	hydroxycinnamoyl‑CoA hydratase‑lyase
RA	3,800,674	Δ1 bp	5.4%	coding (191/831 nt)	PP_3358 ←	hydroxycinnamoyl‑CoA hydratase‑lyase
RA	3,802,804	A→G	7.4%	intergenic (+49/+30)	PP_3360 → / ← PP_3361	membrane protein/aminotransferase
RA	3,802,809	C→T	6.7%	intergenic (+54/+25)	PP_3360 → / ← PP_3361	membrane protein/aminotransferase
RA	3,803,227	A→G	6.2%	N885N (AAT→AAC)	PP_3361 ←	aminotransferase
RA	3,803,236	C→T	8.0%	E882E (GAG→GAA)	PP_3361 ←	aminotransferase
RA	3,803,245	G→A	10.3%	N879N (AAC→AAT)	PP_3361 ←	aminotransferase
RA	3,803,251	Δ1 bp	10.3%	coding (2631/3048 nt)	PP_3361 ←	aminotransferase
RA	3,803,256:1	+T	10.3%	coding (2626/3048 nt)	PP_3361 ←	aminotransferase
RA	3,803,257	A→G	10.2%	D875D (GAT→GAC)	PP_3361 ←	aminotransferase
RA	3,803,260	G→T	10.3%	A874A (GCC→GCA)	PP_3361 ←	aminotransferase
RA	3,803,263	A→C	10.8%	V873V (GTT→GTG)	PP_3361 ←	aminotransferase
RA	3,803,266	C→T	10.9%	E872E (GAG→GAA)	PP_3361 ←	aminotransferase
RA	3,803,269	G→C	11.0%	R871R (CGC→CGG)	PP_3361 ←	aminotransferase
RA	3,803,275	G→T	11.3%	T869T (ACC→ACA)	PP_3361 ←	aminotransferase
RA	3,803,278	C→G	11.2%	V868V (GTG→GTC)	PP_3361 ←	aminotransferase
RA	3,803,281	T→A	11.2%	V867V (GTA→GTT)	PP_3361 ←	aminotransferase
RA	3,803,287	C→A	11.2%	S865S (TCG→TCT)	PP_3361 ←	aminotransferase
RA	3,803,293	C→T	11.4%	P863P (CCG→CCA)	PP_3361 ←	aminotransferase
RA	3,803,296	G→A	11.9%	H862H (CAC→CAT)	PP_3361 ←	aminotransferase
RA	3,803,299	G→A	11.7%	G861G (GGC→GGT)	PP_3361 ←	aminotransferase
RA	3,803,323	G→A	7.2%	S853S (AGC→AGT) ‡	PP_3361 ←	aminotransferase
RA	3,803,324	C→G	7.1%	S853T (AGC→ACC) ‡	PP_3361 ←	aminotransferase
RA	3,803,330	G→A	7.4%	A851V (GCC→GTC) ‡	PP_3361 ←	aminotransferase
RA	3,803,331	C→T	7.2%	A851T (GCC→ACC) ‡	PP_3361 ←	aminotransferase
RA	3,803,332	A→G	7.3%	D850D (GAT→GAC)	PP_3361 ←	aminotransferase
RA	3,803,335	C→A	7.0%	P849P (CCG→CCT)	PP_3361 ←	aminotransferase
RA	3,803,341	C→A	7.5%	V847V (GTG→GTT)	PP_3361 ←	aminotransferase
RA	3,803,344	G→A	7.2%	G846G (GGC→GGT) ‡	PP_3361 ←	aminotransferase
RA	3,803,345	C→T	7.1%	G846D (GGC→GAC) ‡	PP_3361 ←	aminotransferase
RA	3,803,350	G→C	7.1%	T844T (ACC→ACG) ‡	PP_3361 ←	aminotransferase
RA	3,803,351	G→A	7.1%	T844I (ACC→ATC) ‡	PP_3361 ←	aminotransferase
RA	3,803,352	T→A	7.0%	T844S (ACC→TCC) ‡	PP_3361 ←	aminotransferase
RA	3,803,359	T→A	7.0%	A841A (GCA→GCT)	PP_3361 ←	aminotransferase
RA	3,805,985	C→G	5.1%	intergenic (‑104/‑40)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,814,624	A→G	6.7%	D328G (GAC→GGC)	PP_3368 →	MFS transporter
RA	3,814,627	T→A	6.4%	I329N (ATT→AAT)	PP_3368 →	MFS transporter
RA	3,814,630	C→T	6.7%	A330V (GCC→GTC)	PP_3368 →	MFS transporter
RA	3,817,794	T→G	6.4%	A97A (GCA→GCC) ‡	PP_3371 ←	sensor histidine kinase
RA	3,817,795	G→C	6.6%	A97G (GCA→GGA) ‡	PP_3371 ←	sensor histidine kinase
RA	3,817,796	C→A	6.8%	A97S (GCA→TCA) ‡	PP_3371 ←	sensor histidine kinase
RA	3,823,901:1	+T	100%	coding (1248/1293 nt)	kguT ←	2‑ketogluconate transporter, putative
RA	3,824,415	A→G	100%	I245T (ATC→ACC)	kguT ←	2‑ketogluconate transporter, putative
RA	3,824,717	C→T	73.8%	M144I (ATG→ATA)	kguT ←	2‑ketogluconate transporter, putative
JC	3,827,335	Δ51 bp	100%	coding (626‑676/1020 nt)	ptxS ←	2‑ketogluconate utilization repressor
RA	3,846,889	A→T	6.6%	L237Q (CTG→CAG)	PP_3394 ←	3‑hydroxy‑3‑methylglutaryl‑CoA lyase
RA	3,846,893	C→G	5.9%	G236R (GGC→CGC)	PP_3394 ←	3‑hydroxy‑3‑methylglutaryl‑CoA lyase
RA	3,846,894	C→G	5.7%	A235A (GCG→GCC)	PP_3394 ←	3‑hydroxy‑3‑methylglutaryl‑CoA lyase
RA	3,846,898	A→T	5.6%	L234Q (CTG→CAG)	PP_3394 ←	3‑hydroxy‑3‑methylglutaryl‑CoA lyase
RA	3,852,923	A→C	6.3%	N147H (AAT→CAT)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,852,926	G→T	6.3%	G148C (GGC→TGC)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,871,824	T→G	5.4%	E354A (GAG→GCG)	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,874,770	G→C	16.9%	L446V (CTG→GTG)	PP_3421 ←	sensor histidine kinase
RA	3,878,484	Δ1 bp	5.0%	coding (1010/1212 nt)	xcpS →	type II secretion pathway protein XcpS
RA	3,895,448	G→A	6.3%	E282E (GAG→GAA)	rarD →	chloramphenicol‑sensitive protein
RA	3,895,450	G→C	6.3%	G283A (GGC→GCC)	rarD →	chloramphenicol‑sensitive protein
RA	3,895,452	T→C	6.1%	F284L (TTC→CTC)	rarD →	chloramphenicol‑sensitive protein
RA	3,944,906	A→G	5.4%	V318A (GTG→GCG) ‡	PP_3478 ←	secretion protein
RA	3,944,907	C→A	5.4%	V318L (GTG→TTG) ‡	PP_3478 ←	secretion protein
RA	3,944,909	G→A	5.6%	A317V (GCG→GTG)	PP_3478 ←	secretion protein
RA	3,944,914	C→G	7.4%	S315S (TCG→TCC)	PP_3478 ←	secretion protein
RA	3,944,919	T→C	7.4%	T314A (ACG→GCG)	PP_3478 ←	secretion protein
RA	3,944,921	T→G	7.2%	D313A (GAC→GCC) ‡	PP_3478 ←	secretion protein
RA	3,944,922	C→T	7.5%	D313N (GAC→AAC) ‡	PP_3478 ←	secretion protein
RA	3,953,071	A→C	6.9%	intergenic (‑69/+126)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,953,116	T→G	11.2%	intergenic (‑114/+81)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,953,117	G→C	6.8%	intergenic (‑115/+80)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,953,118	C→A	7.6%	intergenic (‑116/+79)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,960,150	A→T	5.3%	L734H (CTT→CAT)	mnxG ←	manganese‑oxidizing multicopper oxidase
RA	3,975,710	C→T	5.0%	P243P (CCG→CCA)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,715	G→T	5.4%	L242M (CTG→ATG)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,716	G→A	5.1%	D241D (GAC→GAT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,751	C→T	5.0%	D230N (GAT→AAT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,755	C→T	5.1%	A228A (GCG→GCA) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,756	G→T	5.1%	A228E (GCG→GAG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,757	C→G	5.3%	A228P (GCG→CCG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,761	G→A	5.0%	I226I (ATC→ATT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,767	C→T	5.1%	G224G (GGG→GGA)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,773	C→T	5.0%	K222K (AAG→AAA) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,774	T→G	5.5%	K222T (AAG→ACG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,775	T→A	5.5%	K222* (AAG→TAG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,776	G→A	5.2%	R221R (CGC→CGT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,779	C→G	5.7%	Q220H (CAG→CAC) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,781	G→T	5.2%	Q220K (CAG→AAG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,782	G→C	5.2%	H219Q (CAC→CAG)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,785	A→T	6.1%	A218A (GCT→GCA)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,788	A→G	5.1%	G217G (GGT→GGC)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,791	G→A	5.3%	T216T (ACC→ACT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,800	G→A	5.5%	G213G (GGC→GGT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,806	C→T	5.5%	E211E (GAG→GAA)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,982,384	A→C	5.2%	Y71* (TAT→TAG) ‡	cobN ←	aerobic cobaltochelatase subunit CobN
RA	3,982,386	A→G	5.1%	Y71H (TAT→CAT) ‡	cobN ←	aerobic cobaltochelatase subunit CobN
RA	3,982,387	C→T	5.1%	L70L (CTG→CTA) ‡	cobN ←	aerobic cobaltochelatase subunit CobN
RA	3,982,389	G→T	5.2%	L70M (CTG→ATG) ‡	cobN ←	aerobic cobaltochelatase subunit CobN
RA	3,986,006	G→T	6.7%	intergenic (+34/+156)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,986,007	C→T	6.7%	intergenic (+35/+155)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,986,008	A→G	7.3%	intergenic (+36/+154)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,986,009	A→C	10.7%	intergenic (+37/+153)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	4,003,875	C→G	7.4%	A31A (GCC→GCG)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,878	C→T	7.4%	V32V (GTC→GTT)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,881	C→T	7.3%	I33I (ATC→ATT)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,884	C→G	7.4%	P34P (CCC→CCG)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,891	G→A	7.3%	V37M (GTG→ATG) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,892	T→C	7.4%	V37A (GTG→GCG) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,893	G→A	7.4%	V37V (GTG→GTA) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,894	A→T	7.4%	M38L (ATG→TTG) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,896	G→C	7.4%	M38I (ATG→ATC) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,897	C→A	7.5%	R39S (CGT→AGT) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,899	T→C	7.7%	R39R (CGT→CGC) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,902	C→T	7.7%	D40D (GAC→GAT)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,911	C→G	7.9%	T43T (ACC→ACG)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,915	C→T	7.6%	H45Y (CAC→TAC) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,916	A→T	7.5%	H45L (CAC→CTC) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,917	C→T	7.6%	H45H (CAC→CAT) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,920	G→T	7.7%	L46L (CTG→CTT)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,937	T→C	7.2%	M52T (ATG→ACG)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,941	C→G	6.9%	R53R (CGC→CGG)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,942	A→C	7.0%	M54L (ATG→CTG)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,948	G→A	6.9%	V56I (GTT→ATT) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,950	T→C	6.9%	V56V (GTT→GTC) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,965	G→A	7.1%	L61L (CTG→CTA)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,966	A→T	7.0%	T62S (ACC→TCC) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,968	C→A	7.2%	T62T (ACC→ACA) ‡	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,980	A→G	7.3%	E66E (GAA→GAG)	allE →	S‑ureidoglycine aminohydrolase
RA	4,003,983	G→T	5.7%	T67T (ACG→ACT)	allE →	S‑ureidoglycine aminohydrolase
RA	4,024,772	C→G	5.2%	intergenic (‑501/+167)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,024,773	C→G	5.2%	intergenic (‑502/+166)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,051,873	A→G	19.6%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,051,876	C→G	19.6%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,051,879	C→T	19.6%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,053,218	C→G	5.7%	intergenic (+16/+27)	oprB‑III → / ← PP_3571	carbohydrate‑selective porin/acetylornithine deacetylase
RA	4,075,575	G→A	6.2%	intergenic (‑147/+477)	mdtA ← / ← PP_3586	multidrug transporter membrane fusion protein/transposase
RA	4,075,576	T→C	6.1%	intergenic (‑148/+476)	mdtA ← / ← PP_3586	multidrug transporter membrane fusion protein/transposase
RA	4,081,136	T→A	7.5%	E9D (GAA→GAT) ‡	sdaC ←	serine:H+ symport permease
RA	4,081,137	T→A	7.5%	E9V (GAA→GTA) ‡	sdaC ←	serine:H+ symport permease
RA	4,081,414	A→T	6.3%	intergenic (‑252/+132)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,152,000	A→T	7.5%	intergenic (+33/‑364)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,160,432	T→G	21.3%	L159R (CTG→CGG)	PP_3661 →	membrane protein
RA	4,160,437	A→C	16.0%	S161R (AGC→CGC)	PP_3661 →	membrane protein
RA	4,161,109	C→T	9.6%	intergenic (+91/‑118)	PP_3661 → / → PP_3662	membrane protein/hypothetical protein
RA	4,164,065	T→C	6.7%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,164,069	T→A	6.6%	intergenic (‑47/+30)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,164,070	T→A	6.8%	intergenic (‑48/+29)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,164,074	G→A	6.7%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,172,146	T→G	11.7%	intergenic (‑288/‑99)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,172,148	A→T	11.8%	intergenic (‑290/‑97)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,172,149	A→T	12.0%	intergenic (‑291/‑96)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,172,151	C→A	11.2%	intergenic (‑293/‑94)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,242,208	T→G	6.0%	R16S (AGA→AGC)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,242,213	C→A	5.8%	A15S (GCT→TCT)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,263,722	G→C	6.1%	L336V (CTG→GTG)	PP_3734 ←	ABC transporter permease
RA	4,263,724	C→T	6.1%	S335N (AGC→AAC)	PP_3734 ←	ABC transporter permease
RA	4,263,726	C→G	6.1%	L334F (TTG→TTC) ‡	PP_3734 ←	ABC transporter permease
RA	4,263,728	A→G	6.1%	L334L (TTG→CTG) ‡	PP_3734 ←	ABC transporter permease
RA	4,263,730	G→C	6.1%	T333R (ACG→AGG)	PP_3734 ←	ABC transporter permease
RA	4,275,010	T→C	6.6%	intergenic (+20/+41)	PP_3743 → / ← glcC	hypothetical protein/transcriptional regulator GlcC
RA	4,275,016	G→T	6.7%	intergenic (+26/+35)	PP_3743 → / ← glcC	hypothetical protein/transcriptional regulator GlcC
RA	4,275,019	G→A	7.2%	intergenic (+29/+32)	PP_3743 → / ← glcC	hypothetical protein/transcriptional regulator GlcC
RA	4,275,020	T→A	6.5%	intergenic (+30/+31)	PP_3743 → / ← glcC	hypothetical protein/transcriptional regulator GlcC
RA	4,275,021	T→C	6.5%	intergenic (+31/+30)	PP_3743 → / ← glcC	hypothetical protein/transcriptional regulator GlcC
RA	4,275,024	A→C	6.6%	intergenic (+34/+27)	PP_3743 → / ← glcC	hypothetical protein/transcriptional regulator GlcC
RA	4,275,030	G→A	6.7%	intergenic (+40/+21)	PP_3743 → / ← glcC	hypothetical protein/transcriptional regulator GlcC
RA	4,275,038	A→G	5.2%	intergenic (+48/+13)	PP_3743 → / ← glcC	hypothetical protein/transcriptional regulator GlcC
RA	4,340,459	A→T	15.8%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,340,460	A→T	11.1%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,342,041	A→T	30.0%	intergenic (+60/‑271)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,042	G→C	30.1%	intergenic (+61/‑270)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,047	A→G	30.6%	intergenic (+66/‑265)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,048	C→T	31.2%	intergenic (+67/‑264)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,049	A→G	31.2%	intergenic (+68/‑263)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,050	C→T	31.2%	intergenic (+69/‑262)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,055	G→C	33.8%	intergenic (+74/‑257)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,056	A→T	30.1%	intergenic (+75/‑256)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,346,268	A→T	14.2%	intergenic (+33/‑123)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,270	C→T	13.8%	intergenic (+35/‑121)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,271	A→G	13.8%	intergenic (+36/‑120)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,276	C→G	12.2%	intergenic (+41/‑115)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,279	C→G	14.5%	intergenic (+44/‑112)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,284	C→T	13.6%	intergenic (+49/‑107)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,285	A→G	13.6%	intergenic (+50/‑106)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,287	A→T	12.6%	intergenic (+52/‑104)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,350,671	A→G	53.4%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,357,012	Δ1 bp	6.1%	coding (246/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,357,016:1	+C	6.2%	coding (250/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,401,532	T→G	8.9%	R108R (CGA→CGC) ‡	PP_3878 ←	minor capsid protein C
RA	4,401,533	C→A	9.8%	R108L (CGA→CTA) ‡	PP_3878 ←	minor capsid protein C
RA	4,422,163	C→G	5.3%	intergenic (+14/‑54)	PP_3911 → / → PP_3912	hypothetical protein/DNA‑cytosine methyltransferase
RA	4,422,165	C→G	5.3%	intergenic (+16/‑52)	PP_3911 → / → PP_3912	hypothetical protein/DNA‑cytosine methyltransferase
RA	4,422,167	C→G	5.0%	intergenic (+18/‑50)	PP_3911 → / → PP_3912	hypothetical protein/DNA‑cytosine methyltransferase
RA	4,432,050	T→G	9.7%	intergenic (+37/‑147)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,432,051	G→T	9.2%	intergenic (+38/‑146)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,432,052	A→C	9.2%	intergenic (+39/‑145)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,432,053	C→A	9.3%	intergenic (+40/‑144)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,433,236	T→G	5.2%	L347W (TTG→TGG) ‡	PP_3925 →	hypothetical protein
RA	4,433,237	G→C	5.2%	L347F (TTG→TTC) ‡	PP_3925 →	hypothetical protein
RA	4,433,238	C→A	5.2%	Q348K (CAG→AAG)	PP_3925 →	hypothetical protein
RA	4,444,594	C→G	7.4%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,444,595	C→G	7.3%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,458,580	G→A	5.0%	T124M (ACG→ATG)	PP_3950 ←	methyl‑accepting chemotaxis transducer
RA	4,465,919	A→T	9.2%	*139C (TGA→TGT)	PP_3956 →	hypothetical protein
RA	4,465,922	G→C	9.3%	intergenic (+3/+25)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,465,925	A→T	9.1%	intergenic (+6/+22)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,479,784	C→A	5.0%	A58A (GCG→GCT)	PP_3968 ←	sensor histidine kinase
RA	4,481,779	A→G	5.2%	P388P (CCA→CCG)	ybdR →	Zn‑dependent oxidoreductase
RA	4,481,785	T→A	5.9%	A390A (GCT→GCA)	ybdR →	Zn‑dependent oxidoreductase
RA	4,481,791	C→T	5.7%	P392P (CCC→CCT)	ybdR →	Zn‑dependent oxidoreductase
RA	4,505,755	C→T	7.2%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,505,756	A→G	7.0%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,519,198	A→C	5.4%	intergenic (+69/+17)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,519,199	A→T	5.1%	intergenic (+70/+16)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,519,200	G→T	5.5%	intergenic (+71/+15)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,530,319	T→A	6.2%	intergenic (+28/‑48)	purB → / → PP_4017	adenylosuccinate lyase/hypothetical protein
RA	4,531,991	T→A	15.2%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,531,992	T→A	15.4%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,543,747	C→A	5.1%	Y166* (TAC→TAA)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,545,558	C→G	6.7%	S9S (TCC→TCG)	rnz →	ribonuclease Z
RA	4,545,561	C→G	6.7%	A10A (GCC→GCG)	rnz →	ribonuclease Z
RA	4,545,563	G→A	6.8%	G11E (GGG→GAG)	rnz →	ribonuclease Z
RA	4,552,829	T→C	11.9%	L78L (TTG→CTG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,843	C→G	11.7%	R82R (CGC→CGG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,844	T→C	11.7%	S83P (TCT→CCT) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,846	T→G	11.7%	S83S (TCT→TCG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,849	G→C	11.3%	L84L (CTG→CTC)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,853	A→G	11.3%	I86V (ATC→GTC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,855	C→G	11.3%	I86M (ATC→ATG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,864	T→C	14.1%	R89R (CGT→CGC)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,870	C→G	14.0%	I91M (ATC→ATG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,872	C→A	14.2%	T92N (ACC→AAC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,873	C→A	13.8%	T92T (ACC→ACA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,874	C→G	14.0%	Q93E (CAG→GAG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,876	G→A	13.9%	Q93Q (CAG→CAA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,884	A→T	14.9%	K96M (AAG→ATG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,886	G→C	14.4%	D97H (GAC→CAC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,887	A→G	14.4%	D97G (GAC→GGC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,911	T→C	15.1%	V105A (GTG→GCG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,912	G→T	15.1%	V105V (GTG→GTT) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,916	C→A	15.1%	L107M (CTG→ATG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,918	G→C	14.7%	L107L (CTG→CTC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,927	G→A	14.2%	P110P (CCG→CCA)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,931	A→G	14.4%	I112V (ATA→GTA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,932	T→A	14.3%	I112K (ATA→AAA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,936	G→A	15.0%	E113E (GAG→GAA)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,940	T→G	14.8%	S115A (TCG→GCG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,948	G→A	14.7%	K117K (AAG→AAA)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,949	T→G	14.8%	F118V (TTC→GTC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,950	T→C	14.8%	F118S (TTC→TCC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,951	C→A	14.7%	F118L (TTC→TTA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,960	G→C	14.7%	P121P (CCG→CCC)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,971	C→A	5.5%	A125D (GCC→GAC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,972	C→A	5.2%	A125A (GCC→GCA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,975	G→T	5.3%	T126T (ACG→ACT)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,978	G→C	5.1%	G127G (GGG→GGC)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,981	C→T	5.4%	A128A (GCC→GCT)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,984	T→C	5.4%	D129D (GAT→GAC)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,990	C→T	5.3%	I131I (ATC→ATT)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,578,013	T→C	6.7%	H148H (CAT→CAC)	ybhP‑II →	phosphohydrolase
RA	4,578,016	G→A	6.7%	A149A (GCG→GCA)	ybhP‑II →	phosphohydrolase
RA	4,578,018	T→A	6.7%	V150D (GTC→GAC)	ybhP‑II →	phosphohydrolase
RA	4,578,020	T→C	6.5%	C151R (TGC→CGC)	ybhP‑II →	phosphohydrolase
RA	4,578,023	G→A	6.9%	V152M (GTG→ATG)	ybhP‑II →	phosphohydrolase
RA	4,582,565	C→A	6.5%	Q943H (CAG→CAT) ‡	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,582,566	T→A	6.6%	Q943L (CAG→CTG) ‡	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,582,569	T→A	6.6%	K942M (AAG→ATG) ‡	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,582,570	T→G	6.4%	K942Q (AAG→CAG) ‡	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,588,023	A→G	18.3%	intergenic (+140/+77)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,025	C→A	18.4%	intergenic (+142/+75)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,027	T→C	20.8%	intergenic (+144/+73)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,034	C→A	17.8%	intergenic (+151/+66)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,037	G→C	17.3%	intergenic (+154/+63)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,040	T→G	17.6%	intergenic (+157/+60)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,046	G→A	16.5%	intergenic (+163/+54)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,048	T→G	19.1%	intergenic (+165/+52)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,050	C→T	19.0%	intergenic (+167/+50)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,591,604	G→C	6.6%	V106V (GTG→GTC)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,605	G→T	6.6%	A107S (GCC→TCC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,606	C→G	6.6%	A107G (GCC→GGC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,613	C→T	9.9%	D109D (GAC→GAT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,616	C→A	10.0%	A110A (GCC→GCA)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,622	A→G	13.1%	V112V (GTA→GTG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,625	A→G	13.1%	K113K (AAA→AAG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,631	T→C	13.0%	G115G (GGT→GGC)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,632	T→A	13.4%	S116T (TCG→ACG) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,634	G→C	13.1%	S116S (TCG→TCC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,637	C→T	13.4%	Y117Y (TAC→TAT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,640	C→T	13.6%	Y118Y (TAC→TAT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,644	C→G	12.8%	L120V (CTG→GTG) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,646	G→C	13.0%	L120L (CTG→CTC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,670	A→G	15.2%	A128A (GCA→GCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,673	A→G	14.8%	Q129Q (CAA→CAG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,674	A→G	14.8%	T130A (ACC→GCC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,675	C→A	14.4%	T130N (ACC→AAC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,676	C→A	14.4%	T130T (ACC→ACA) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,682	C→G	14.5%	A132A (GCC→GCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,683	C→G	14.5%	L133V (CTG→GTG) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,684	T→G	14.4%	L133R (CTG→CGG) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,685	G→C	14.6%	L133L (CTG→CTC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,686	C→G	14.2%	Q134E (CAG→GAG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,694	C→T	13.7%	R136R (CGC→CGT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,700	G→C	14.0%	P138P (CCG→CCC)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,706	C→T	12.5%	I140I (ATC→ATT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,715	G→C	10.7%	V143V (GTG→GTC)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,718	C→T	10.7%	D144D (GAC→GAT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,730	C→G	10.8%	A148A (GCC→GCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,734	T→C	10.8%	L150L (TTG→CTG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,740	C→A	9.3%	R152S (CGC→AGC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,741	G→A	8.4%	R152H (CGC→CAC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,742	C→T	8.9%	R152R (CGC→CGT) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,751	A→G	7.9%	E155E (GAA→GAG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,754	G→T	5.5%	V156V (GTG→GTT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,757	C→T	5.0%	F157F (TTC→TTT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,760	C→G	5.0%	P158P (CCC→CCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,601,264	C→A	5.1%	Q171H (CAG→CAT)	PP_4071 ←	membrane protein
RA	4,623,389	C→G	10.2%	intergenic (+14/+4550)	PP_5654 → / ← PP_4091	phosphotriesterase/transposase
RA	4,671,699	G→C	6.5%	T21T (ACG→ACC)	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,671,700	G→A	5.8%	V22M (GTG→ATG) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,671,701	T→C	5.9%	V22A (GTG→GCG) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,671,702	G→C	5.9%	V22V (GTG→GTC) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,675,517	G→C	5.1%	P107P (CCG→CCC)	PP_4137 →	outer membrane siderophore receptor
RA	4,675,518	G→C	5.1%	G108R (GGG→CGG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,675,519	G→C	5.1%	G108A (GGG→GCG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,677,305	G→T	11.8%	intergenic (+36/+68)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,702,726	T→C	5.9%	intergenic (‑71/+79)	kdpD ← / ← kdpC	sensor protein/potassium‑transporting ATPase subunit C
RA	4,707,370	T→C	7.1%	intergenic (‑140/+37)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,371	C→T	7.0%	intergenic (‑141/+36)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,381	T→A	11.3%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,382	T→A	11.2%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,720,656	C→A	5.9%	intergenic (+32/+99)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,720,657	T→C	5.9%	intergenic (+33/+98)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,720,658	G→C	6.0%	intergenic (+34/+97)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,720,659	G→A	6.0%	intergenic (+35/+96)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,720,660	T→G	6.6%	intergenic (+36/+95)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,729,099	A→T	6.3%	L84Q (CTG→CAG)	brnQ ←	branched‑chain amino acid transporter
RA	4,729,102	A→T	6.3%	L83Q (CTG→CAG)	brnQ ←	branched‑chain amino acid transporter
RA	4,733,467	T→G	8.4%	intergenic (‑56/+38)	lpdG ← / ← sucB	dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,733,468	T→C	6.8%	intergenic (‑57/+37)	lpdG ← / ← sucB	dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,733,469	G→A	6.6%	intergenic (‑58/+36)	lpdG ← / ← sucB	dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,733,470	C→A	6.5%	intergenic (‑59/+35)	lpdG ← / ← sucB	dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,742,763	T→G	10.7%	intergenic (+32/+720)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,764	C→A	7.4%	intergenic (+33/+719)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,806	C→G	24.4%	intergenic (+75/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,808	T→A	23.3%	intergenic (+77/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,809	T→A	23.7%	intergenic (+78/+674)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,811	C→G	26.3%	intergenic (+80/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,195:1	+C	100%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,197	A→G	100%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,199	C→T	100%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,202	C→T	100%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,205	C→G	100%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,207	2 bp→CT	100%	intergenic (+476/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,221	C→T	100%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,223	A→C	100%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,226	2 bp→GC	100%	intergenic (+495/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,746,567	A→C	5.2%	S76A (TCC→GCC)	PP_4198 ←	OmpA family protein
RA	4,748,085	C→G	6.4%	L298L (CTG→CTC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,088	G→A	6.5%	D297D (GAC→GAT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,092	G→C	7.6%	A296G (GCT→GGT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,097	C→G	7.5%	L294L (CTG→CTC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,103	G→A	13.1%	Y292Y (TAC→TAT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,106	G→A	12.6%	D291D (GAC→GAT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,109	G→A	5.4%	A290A (GCC→GCT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,112	C→A	9.9%	V289V (GTG→GTT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,127	C→T	10.3%	A284A (GCG→GCA)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,148	C→G	14.4%	A277A (GCG→GCC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,151	C→A	21.3%	V276V (GTG→GTT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,154	G→A	14.2%	I275I (ATC→ATT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,157	C→G	14.6%	V274V (GTG→GTC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,160	T→G	30.8%	K273N (AAA→AAC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,161	T→C	29.7%	K273R (AAA→AGA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,162	T→G	29.8%	K273Q (AAA→CAA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,163	G→T	14.8%	S272S (TCC→TCA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,164	G→C	14.8%	S272C (TCC→TGC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,165	A→T	14.8%	S272T (TCC→ACC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,169	T→C	14.9%	K270K (AAA→AAG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,178	G→A	18.2%	A267A (GCC→GCT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,184	G→A	30.2%	H265H (CAC→CAT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,196	G→A	13.9%	G261G (GGC→GGT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,199	G→C	12.5%	S260S (TCC→TCG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,202	G→A	15.7%	I259I (ATC→ATT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,205	A→G	12.5%	G258G (GGT→GGC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,211	G→A	17.1%	A256A (GCC→GCT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,220	C→A	27.5%	L253L (CTG→CTT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,223	C→T	12.1%	Q252Q (CAG→CAA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,225	G→C	26.3%	Q252E (CAG→GAG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,226	T→C	15.6%	P251P (CCA→CCG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,229	C→T	27.3%	A250A (GCG→GCA)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,235	G→C	25.8%	I248M (ATC→ATG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,237	T→C	25.4%	I248V (ATC→GTC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,244	G→C	11.4%	T245T (ACC→ACG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,253	G→A	10.3%	V242V (GTC→GTT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,260	A→C	11.8%	M240R (ATG→AGG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,261	T→A	11.7%	M240L (ATG→TTG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,749,048	G→A	5.5%	S227S (AGC→AGT) ‡	etfB ←	electron transfer flavoprotein subunit beta
RA	4,749,049	C→G	5.4%	S227T (AGC→ACC) ‡	etfB ←	electron transfer flavoprotein subunit beta
RA	4,749,050	T→C	5.3%	S227G (AGC→GGC) ‡	etfB ←	electron transfer flavoprotein subunit beta
RA	4,760,103	G→C	6.9%	R470P (CGC→CCC)	ompQ →	outer membrane pyoverdine efflux protein
RA	4,760,108	G→C	7.3%	intergenic (+1/+20)	ompQ → / ← pvdP	outer membrane pyoverdine efflux protein/pyoverdine biosynthesis‑like protein
RA	4,769,785	C→T	7.8%	intergenic (+32/+37)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,769,786	A→G	7.9%	intergenic (+33/+36)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,798,571	A→G	15.2%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,579	C→T	21.3%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,581	G→C	21.8%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,584	G→C	18.8%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,586	A→G	19.6%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,594	C→T	15.5%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,807,085	T→A	5.9%	K925M (AAG→ATG)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,807,090	G→A	5.0%	I923I (ATC→ATT) ‡	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,807,091	A→T	5.1%	I923N (ATC→AAC) ‡	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,807,092	T→C	5.1%	I923V (ATC→GTC) ‡	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,807,097	T→A	5.2%	H921L (CAT→CTT)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,808,082	A→T	8.3%	S593T (TCG→ACG)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,808,083	A→T	8.5%	R592R (CGT→CGA)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,814,150	C→T	6.8%	intergenic (+103/‑290)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,814,151	A→T	6.8%	intergenic (+104/‑289)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,814,152	A→G	6.7%	intergenic (+105/‑288)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,844,791	T→G	7.2%	S316A (TCG→GCG) ‡	ccoP‑II →	cbb3‑type cytochrome c oxidase subunit
RA	4,844,792	C→T	5.2%	S316L (TCG→TTG) ‡	ccoP‑II →	cbb3‑type cytochrome c oxidase subunit
RA	4,844,795	A→G	5.3%	H317R (CAC→CGC) ‡	ccoP‑II →	cbb3‑type cytochrome c oxidase subunit
RA	4,844,796	C→A	5.3%	H317Q (CAC→CAA) ‡	ccoP‑II →	cbb3‑type cytochrome c oxidase subunit
RA	4,844,863	Δ1 bp	17.6%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,844,871:1	+G	20.4%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,872,107	T→G	5.4%	A630A (GCT→GCG)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,114	G→T	6.7%	V633L (GTG→TTG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,115	T→C	6.0%	V633A (GTG→GCG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,122	Δ1 bp	6.3%	coding (1905/2400 nt)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,125:1	+G	6.5%	coding (1908/2400 nt)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,149	C→T	10.1%	Y644Y (TAC→TAT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,150	A→G	9.9%	K645E (AAG→GAG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,151	A→T	10.0%	K645M (AAG→ATG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,153	A→G	9.8%	M646V (ATG→GTG)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,156	T→G	10.2%	L647V (TTG→GTG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,157	T→A	9.7%	L647* (TTG→TAG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,162	G→A	9.8%	A649T (GCC→ACC)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,167	C→T	9.8%	D650D (GAC→GAT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,170	C→T	9.9%	I651I (ATC→ATT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,173	G→T	9.7%	L652L (CTG→CTT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,179	C→T	10.1%	D654D (GAC→GAT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,180	G→A	10.1%	V655M (GTG→ATG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,181	T→C	9.9%	V655A (GTG→GCG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,186	G→C	10.1%	D657H (GAT→CAT) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,187	A→G	10.0%	D657G (GAT→GGT) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,199	C→G	10.6%	P661R (CCT→CGT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,202	C→T	10.3%	A662V (GCG→GTG)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,206	C→T	10.5%	I663I (ATC→ATT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,209	C→T	10.3%	D664D (GAC→GAT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,212	C→T	9.9%	I665I (ATC→ATT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,215	C→T	10.1%	G666G (GGC→GGT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,224	G→A	9.7%	E669E (GAG→GAA)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,227	T→C	10.3%	G670G (GGT→GGC)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,230	T→C	10.3%	G671G (GGT→GGC)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,234	A→G	9.5%	I673V (ATC→GTC) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,236	C→G	9.8%	I673M (ATC→ATG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,878,325	C→A	5.7%	intergenic (+196/+241)	PP_4284 → / ← pucM	transporter/5‑hydroxyisourate hydrolase
RA	4,888,133	T→A	6.4%	intergenic (+45/+78)	PP_4295 → / ← PP_4296	TetR family transcriptional regulator/hypothetical protein
RA	4,892,736	T→A	6.6%	intergenic (+169/‑70)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,737	T→A	6.0%	intergenic (+170/‑69)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,739	G→T	5.2%	intergenic (+172/‑67)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,744	G→C	6.6%	intergenic (+177/‑62)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,746	A→G	6.2%	intergenic (+179/‑60)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,747	C→T	6.2%	intergenic (+180/‑59)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,749	G→C	7.0%	intergenic (+182/‑57)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,754	A→C	6.6%	intergenic (+187/‑52)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,756	T→A	6.3%	intergenic (+189/‑50)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,892,757	T→A	6.3%	intergenic (+190/‑49)	glxR → / → ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
RA	4,898,366	T→C	7.8%	intergenic (+32/‑176)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,898,389	T→C	5.4%	intergenic (+55/‑153)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,898,392	G→A	5.4%	intergenic (+58/‑150)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,902,032	A→G	19.1%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,036	G→A	18.4%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,037	T→C	18.6%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,041	C→T	18.2%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,055	T→C	6.0%	intergenic (+49/‑449)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,910,021	A→C	9.8%	intergenic (‑30/‑252)	PP_4317 ← / → PP_4318	hypothetical protein/transposase
RA	4,911,888	C→G	7.1%	intergenic (+314/+165)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,911,889	C→G	7.8%	intergenic (+315/+164)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,919,932	G→A	5.2%	V122I (GTC→ATC) ‡	PP_4328 →	hypothetical protein
RA	4,919,933	T→C	5.1%	V122A (GTC→GCC) ‡	PP_4328 →	hypothetical protein
RA	4,947,583	C→G	8.0%	R322P (CGG→CCG)	flhB ←	flagellin export apparatus substrate specificity protein
RA	4,947,588	C→T	7.3%	L320L (CTG→CTA) ‡	flhB ←	flagellin export apparatus substrate specificity protein
RA	4,947,589	A→G	7.2%	L320P (CTG→CCG) ‡	flhB ←	flagellin export apparatus substrate specificity protein
RA	4,947,594	C→G	7.1%	P318P (CCG→CCC)	flhB ←	flagellin export apparatus substrate specificity protein
RA	4,952,939	T→G	14.5%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,952,940	C→A	9.7%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,973,827	C→T	5.9%	intergenic (‑295/+122)	PP_4379 ← / ← flgL	3‑oxoacyl‑ACP synthase/flagellar hook‑associated protein FlgL
RA	4,988,018	C→G	10.5%	P97R (CCG→CGG)	flgA →	flagella basal body P‑ring formation protein
RA	4,995,580	C→G	6.3%	S98S (TCC→TCG)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,583	G→A	6.6%	E99E (GAG→GAA)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,584	C→G	6.5%	L100V (CTG→GTG) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,585	T→C	6.4%	L100P (CTG→CCG) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,589	C→G	7.0%	A101A (GCC→GCG)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,593	C→T	6.5%	L103L (CTG→TTG)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,598	T→C	6.5%	R104R (CGT→CGC)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,601	C→T	6.2%	Y105Y (TAC→TAT)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,610	C→G	7.0%	A108A (GCC→GCG)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,613	C→T	6.9%	G109G (GGC→GGT)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,616	G→A	6.6%	E110E (GAG→GAA)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,619	C→T	6.6%	F111F (TTC→TTT)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,621	T→C	6.7%	I112T (ATT→ACT) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,622	T→A	6.7%	I112I (ATT→ATA) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,623	G→T	7.0%	A113S (GCC→TCC) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,624	C→G	6.8%	A113G (GCC→GGC) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,628	G→T	7.0%	P114P (CCG→CCT)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,632	A→G	6.9%	T116A (ACC→GCC) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,633	C→T	6.8%	T116I (ACC→ATC) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,634	C→G	6.8%	T116T (ACC→ACG) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,635	C→A	6.8%	L117M (CTG→ATG) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,637	G→C	6.9%	L117L (CTG→CTC) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,640	C→T	6.9%	R118R (CGC→CGT)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,646	T→G	6.5%	P120P (CCT→CCG)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,648	G→C	6.4%	C121S (TGC→TCC) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,649	C→A	7.2%	C121* (TGC→TGA) ‡	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,670	C→G	6.8%	G128G (GGC→GGG)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	4,995,676	T→A	6.7%	T130T (ACT→ACA)	bkdAB →	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
RA	5,017,882	A→T	6.2%	intergenic (‑175/+59)	PP_5679 ← / ← PP_4421	hypothetical protein/aminotransferase
RA	5,017,883	A→T	6.2%	intergenic (‑176/+58)	PP_5679 ← / ← PP_4421	hypothetical protein/aminotransferase
RA	5,032,718	A→G	10.3%	intergenic (+34/‑461)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,032,721	C→T	8.0%	intergenic (+37/‑458)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,046,962	C→G	5.7%	L69L (CTG→CTC)	PP_5681 ←	hypothetical protein
RA	5,079,204	G→T	6.7%	intergenic (+29/+79)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,079,207	A→C	6.7%	intergenic (+32/+76)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,098,259	A→C	5.9%	P159P (CCT→CCG)	argT ←	lysine/arginine/ornithine ABC transporter substrate‑binding protein
RA	5,099,192	G→C	7.2%	intergenic (+213/+79)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,099,195	G→T	6.5%	intergenic (+216/+76)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,099,210	A→C	6.9%	intergenic (+231/+61)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,099,211	G→C	7.0%	intergenic (+232/+60)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,099,217	A→C	8.3%	intergenic (+238/+54)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,101,905	T→G	22.0%	intergenic (+21/+132)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,101,957	A→C	6.7%	intergenic (+73/+80)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,102,008	A→G	7.5%	intergenic (+124/+29)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,102,009	A→T	7.4%	intergenic (+125/+28)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,102,010	C→T	7.3%	intergenic (+126/+27)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,102,927	T→G	5.9%	M224L (ATG→CTG)	phhR ←	sigma‑54 dependent transcriptional regulator
RA	5,137,853	G→C	5.5%	D229E (GAC→GAG)	PP_4521 ←	aerotaxis receptor
RA	5,137,858	G→C	5.5%	L228V (CTC→GTC)	PP_4521 ←	aerotaxis receptor
RA	5,143,669	G→A	5.7%	V12M (GTG→ATG) ‡	PP_4526 →	MFS transporter
RA	5,143,670	T→C	5.7%	V12A (GTG→GCG) ‡	PP_4526 →	MFS transporter
RA	5,151,406	C→G	5.2%	intergenic (‑422/+26)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,151,407	T→G	5.3%	intergenic (‑423/+25)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,151,410	C→A	5.4%	intergenic (‑426/+22)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,151,411	C→G	5.3%	intergenic (‑427/+21)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,151,414	C→T	5.4%	intergenic (‑430/+18)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,160,723	C→G	5.0%	A283A (GCC→GCG)	PP_4542 →	ABC transporter ATP‑binding protein/permease
RA	5,164,568	T→A	6.1%	intergenic (+121/+80)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,175,214	T→C	19.7%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,175,217	G→C	19.6%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,175,218	G→C	19.5%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,175,221	G→A	20.3%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,184,029	G→T	10.3%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,184,035	T→G	19.3%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,184,036	C→A	19.1%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,184,042	A→C	18.3%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,189,949	T→G	5.9%	L162V (TTG→GTG) ‡	PP_4567 →	hypothetical protein
RA	5,189,950	T→C	5.2%	L162S (TTG→TCG) ‡	PP_4567 →	hypothetical protein
RA	5,194,729	T→G	8.8%	intergenic (+140/‑62)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,204,952	T→G	5.1%	L430R (CTG→CGG)	PP_4583 →	putative Peptidase
RA	5,214,457	A→G	10.3%	intergenic (+51/+43)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,214,458	C→A	10.2%	intergenic (+52/+42)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,214,461	T→G	10.6%	intergenic (+55/+39)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,214,462	C→T	10.9%	intergenic (+56/+38)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,229,244	Δ1 bp	5.4%	coding (1785/2391 nt)	PP_4606 ←	ferric siderophore receptor
RA	5,229,249	C→G	6.0%	A594P (GCA→CCA)	PP_4606 ←	ferric siderophore receptor
RA	5,229,253:1	+T	6.2%	coding (1776/2391 nt)	PP_4606 ←	ferric siderophore receptor
RA	5,231,149	G→A	5.6%	intergenic (‑121/+55)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,231,161	Δ1 bp	13.6%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,231,165	C→G	14.6%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,231,168	C→G	15.1%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,231,171:1	+C	15.8%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,231,183	T→C	6.8%	intergenic (‑155/+21)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,235,513	T→C	6.7%	V136A (GTC→GCC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,235,516	A→T	6.0%	D137V (GAC→GTC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,235,519	G→A	5.6%	G138D (GGC→GAC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,259,841	T→C	7.5%	intergenic (‑70/+74)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,842	G→A	7.7%	intergenic (‑71/+73)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,844	A→G	7.7%	intergenic (‑73/+71)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,853	T→C	7.0%	intergenic (‑82/+62)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,859	G→T	6.0%	intergenic (‑88/+56)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,860	G→T	6.1%	intergenic (‑89/+55)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,861	G→C	6.1%	intergenic (‑90/+54)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,862	A→T	5.9%	intergenic (‑91/+53)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,863	G→C	5.9%	intergenic (‑92/+52)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,864	A→C	5.9%	intergenic (‑93/+51)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,865	A→C	6.4%	intergenic (‑94/+50)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,871	G→A	6.8%	intergenic (‑100/+44)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,880	C→T	6.8%	intergenic (‑109/+35)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,882	T→C	7.0%	intergenic (‑111/+33)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,883	G→A	6.8%	intergenic (‑112/+32)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,266,260:1	+T	9.2%	intergenic (‑44/+40)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,266,263	T→G	9.2%	intergenic (‑47/+37)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,266,266	C→A	9.3%	intergenic (‑50/+34)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,266,269	Δ1 bp	9.2%	intergenic (‑53/+31)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,270,371	T→A	7.5%	A329A (GCT→GCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,380	C→T	9.3%	G332G (GGC→GGT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,381	G→C	9.3%	V333L (GTG→CTG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,383	G→T	8.8%	V333V (GTG→GTT) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,390	G→A	9.9%	V336M (GTG→ATG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,392	G→C	9.9%	V336V (GTG→GTC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,393	G→A	9.9%	V337I (GTA→ATA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,394	T→C	9.8%	V337A (GTA→GCA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,401	C→T	11.0%	G339G (GGC→GGT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,402	T→C	11.1%	L340L (TTG→CTG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,404	G→T	11.3%	L340F (TTG→TTT) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,410	A→T	11.4%	P342P (CCA→CCT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,413	C→A	11.3%	V343V (GTC→GTA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,419	C→A	11.9%	G345G (GGC→GGA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,432	G→T	13.3%	A350S (GCC→TCC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,433	C→G	12.7%	A350G (GCC→GGC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,434	C→T	12.7%	A350A (GCC→GCT) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,437	G→T	12.5%	V351V (GTG→GTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,440	T→G	12.4%	P352P (CCT→CCG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,441	A→C	12.8%	T353P (ACC→CCC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,443	C→A	13.3%	T353T (ACC→ACA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,444	C→G	13.2%	P354A (CCG→GCG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,446	G→A	13.1%	P354P (CCG→CCA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,449	A→G	13.0%	V355V (GTA→GTG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,455	C→T	16.2%	G357G (GGC→GGT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,458	C→T	16.3%	G358G (GGC→GGT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,479	C→A	21.8%	G365G (GGC→GGA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,482	C→G	21.3%	T366T (ACC→ACG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,485	G→T	21.0%	V367V (GTG→GTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,488	G→C	21.1%	A368A (GCG→GCC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,491	C→A	20.1%	A369A (GCC→GCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,497	T→C	22.1%	G371G (GGT→GGC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,506	C→A	23.6%	T374T (ACC→ACA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,509	G→T	22.9%	L375L (CTG→CTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,512	C→A	20.3%	S376S (TCC→TCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,519	A→G	20.9%	S379G (AGC→GGC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,520	G→A	21.2%	S379N (AGC→AAC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,524	C→T	20.5%	Y380Y (TAC→TAT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,525	A→C	20.9%	K381Q (AAG→CAG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,534	G→A	24.3%	V384I (GTC→ATC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,539	C→T	24.1%	N385N (AAC→AAT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,548	C→T	25.3%	I388I (ATC→ATT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,551	C→G	25.4%	V389V (GTC→GTG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,554	G→T	25.4%	A390A (GCG→GCT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,555	G→A	25.4%	A391T (GCC→ACC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,560	G→C	25.6%	S392S (TCG→TCC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,561	C→A	26.1%	L393M (CTG→ATG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,563	G→C	26.7%	L393L (CTG→CTC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,587	C→A	25.6%	A401A (GCC→GCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,593	G→A	23.8%	P403P (CCG→CCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,594	A→G	23.7%	T404A (ACC→GCC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,595	C→A	23.5%	T404N (ACC→AAC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,596	C→A	23.6%	T404T (ACC→ACA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,605	C→T	23.1%	H407H (CAC→CAT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,608	C→G	23.0%	H408Q (CAC→CAG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,615	A→G	20.1%	N411D (AAC→GAC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,616	A→C	20.1%	N411T (AAC→ACC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,623	C→T	18.0%	F413F (TTC→TTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,626	G→A	18.7%	E414E (GAG→GAA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,632	C→T	16.1%	I416I (ATC→ATT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,635	C→T	16.7%	F417F (TTC→TTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,638	C→T	15.6%	H418H (CAC→CAT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,641	C→A	14.1%	S419S (TCC→TCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,653	G→C	7.8%	S423S (TCG→TCC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,656	G→T	7.8%	A424A (GCG→GCT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,659	G→A	7.7%	A425A (GCG→GCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,660	A→T	7.3%	I426F (ATC→TTC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,662	C→G	7.5%	I426M (ATC→ATG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,668	C→A	7.8%	A428A (GCC→GCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,921	T→A	5.8%	intergenic (+19/+17)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,270,922	T→A	5.8%	intergenic (+20/+16)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,282,894	T→A	9.2%	intergenic (+57/+81)	trmA → / ← pcaG	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha
RA	5,309,864	A→T	51.5%	noncoding (2696/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,871	T→C	51.2%	noncoding (2689/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,878	C→A	51.5%	noncoding (2682/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,882	A→C	44.0%	noncoding (2678/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,889	A→C	44.0%	noncoding (2671/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,891	G→A	43.8%	noncoding (2669/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,893	T→G	58.5%	noncoding (2667/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,919	G→A	45.8%	noncoding (2641/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,926	C→A	50.0%	noncoding (2634/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,931	C→A	45.9%	noncoding (2629/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,936	A→T	46.1%	noncoding (2624/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,937	T→A	46.2%	noncoding (2623/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,945	G→A	44.3%	noncoding (2615/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,952	G→A	50.0%	noncoding (2608/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,954	A→G	50.0%	noncoding (2606/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,992	G→A	45.4%	noncoding (2568/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,996	G→A	50.0%	noncoding (2564/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,010	A→T	43.4%	noncoding (2550/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,011	T→G	43.8%	noncoding (2549/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,023	A→C	43.7%	noncoding (2537/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,024	T→A	43.7%	noncoding (2536/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,314,275	A→G	30.4%	noncoding (377/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,277	G→T	30.5%	noncoding (375/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,281	G→C	30.5%	noncoding (371/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,282	G→C	30.4%	noncoding (370/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,283	A→G	30.4%	noncoding (369/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,288	G→A	30.4%	noncoding (364/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,292	T→G	61.2%	noncoding (360/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,295	C→T	30.4%	noncoding (357/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,302	T→C	30.4%	noncoding (350/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,303	C→G	30.4%	noncoding (349/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,304	C→G	30.4%	noncoding (348/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,307	T→G	30.5%	noncoding (345/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,314	C→T	30.4%	noncoding (338/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,364	T→C	30.4%	noncoding (288/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,370	T→C	31.2%	noncoding (282/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,379	A→G	29.2%	noncoding (273/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,380	C→T	29.2%	noncoding (272/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,382	A→G	29.2%	noncoding (270/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,387	C→T	54.2%	noncoding (265/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,389	G→C	29.2%	noncoding (263/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,314,395	C→T	29.2%	noncoding (257/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,315,246	C→G	8.5%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,315,249	C→G	6.2%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,318,022	C→T	10.0%	intergenic (‑120/+31)	PP_4677 ← / ← ilvC	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase
RA	5,318,023	G→T	9.9%	intergenic (‑121/+30)	PP_4677 ← / ← ilvC	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase
RA	5,318,024	A→C	10.1%	intergenic (‑122/+29)	PP_4677 ← / ← ilvC	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase
RA	5,318,025	A→G	10.1%	intergenic (‑123/+28)	PP_4677 ← / ← ilvC	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase
RA	5,318,371	C→G	9.8%	L233L (CTG→CTC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,379	G→T	9.8%	L231M (CTG→ATG)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,380	C→T	9.8%	E230E (GAG→GAA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,401	G→A	11.0%	A223A (GCC→GCT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,410	C→T	10.8%	P220P (CCG→CCA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,413	C→T	10.8%	A219A (GCG→GCA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,419	G→A	10.5%	G217G (GGC→GGT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,434	G→A	9.2%	T212T (ACC→ACT) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,435	G→A	9.2%	T212I (ACC→ATC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,436	T→C	9.1%	T212A (ACC→GCC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,440	G→A	9.1%	F210F (TTC→TTT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,446	G→T	9.0%	A208A (GCC→GCA) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,448	C→T	9.1%	A208T (GCC→ACC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,449	T→G	9.2%	K207N (AAA→AAC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,450	T→C	9.2%	K207R (AAA→AGA) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,451	T→G	9.2%	K207Q (AAA→CAA) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,452	G→A	9.0%	V206V (GTC→GTT) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,454	C→T	8.8%	V206I (GTC→ATC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,455	C→G	8.8%	L205L (CTG→CTC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,458	C→T	8.7%	E204E (GAG→GAA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,461	G→A	8.7%	V203V (GTC→GTT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,464	G→A	9.0%	T202T (ACC→ACT) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,465	G→A	9.0%	T202I (ACC→ATC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,466	T→C	9.0%	T202A (ACC→GCC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,467	A→G	9.1%	G201G (GGT→GGC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,470	G→A	8.9%	G200G (GGC→GGT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,473	A→G	8.9%	C199C (TGT→TGC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,476	C→A	8.9%	L198L (CTG→CTT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,503	G→A	7.1%	T189T (ACC→ACT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,510	G→C	7.1%	T187S (ACC→AGC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,511	T→A	7.1%	T187S (ACC→TCC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,512	T→C	7.1%	E186E (GAA→GAG)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,515	G→T	7.0%	D185E (GAC→GAA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,320,421	G→C	5.1%	A308G (GCG→GGG)	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,320,423	C→G	5.1%	P307P (CCG→CCC)	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,326,132	C→A	5.6%	R266R (CGG→AGG)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,326,136	G→A	5.5%	R267H (CGC→CAC)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,334,215	C→G	6.2%	intergenic (+28/‑21)	dksA → / → gluQ	RNA polymerase‑binding transcription factor DksA/glutamyl‑Q tRNA(Asp) synthetase
RA	5,346,431:1	+C	9.2%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,431:2	+T	9.2%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,437	C→G	23.1%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,441	C→T	23.9%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,450	A→G	27.4%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,454	C→G	27.9%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,468	T→A	5.3%	intergenic (+73/‑105)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,355,781	C→A	7.7%	L102L (CTG→CTT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,787	A→G	9.1%	R100R (CGT→CGC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,814	G→A	8.8%	T91T (ACC→ACT) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,815	G→A	8.8%	T91I (ACC→ATC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,816	T→C	8.8%	T91A (ACC→GCC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,820	C→A	8.6%	T89T (ACG→ACT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,823	C→T	9.0%	E88E (GAG→GAA)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,826	T→G	9.4%	K87N (AAA→AAC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,833	G→C	8.7%	S85C (TCC→TGC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,834	A→T	8.8%	S85T (TCC→ACC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,835	A→T	8.8%	P84P (CCT→CCA)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,841	G→A	9.0%	G82G (GGC→GGT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,847	A→G	9.2%	R80R (CGT→CGC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,859	G→A	9.5%	G76G (GGC→GGT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,880	G→T	8.3%	A69A (GCC→GCA)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,886	G→A	8.8%	T67T (ACC→ACT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,898	G→A	8.2%	Y63Y (TAC→TAT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,903	G→T	5.1%	H62N (CAC→AAC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,904	A→G	5.2%	V61V (GTT→GTC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,907	C→G	5.3%	S60S (TCG→TCC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,909	A→T	5.5%	S60T (TCG→ACG) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,356,628	T→C	5.4%	G11G (GGA→GGG)  noncoding (17/97 nt)	rpsO ← PP_mr54 ←	30S ribosomal protein S15 S15 regulatory region
RA	5,356,641	G→A	6.8%	T7I (ACC→ATC)  noncoding (4/97 nt)	rpsO ← PP_mr54 ←	30S ribosomal protein S15 S15 regulatory region
RA	5,367,677	C→A	6.9%	L283F (TTG→TTT) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,679	A→G	6.8%	L283L (TTG→CTG) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,686	G→C	9.0%	L280L (CTC→CTG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,689	G→C	9.5%	T279T (ACC→ACG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,692	T→C	9.6%	Q278Q (CAA→CAG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,695	C→T	9.9%	E277E (GAG→GAA)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,698	A→G	9.5%	R276R (CGT→CGC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,701	C→T	9.5%	E275E (GAG→GAA)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,709	G→T	12.0%	H273N (CAC→AAC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,710	A→G	11.9%	G272G (GGT→GGC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,719	C→A	13.4%	M269I (ATG→ATT) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,721	T→G	13.2%	M269L (ATG→CTG) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,722	G→A	13.3%	G268G (GGC→GGT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,728	G→A	17.9%	G266G (GGC→GGT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,734	A→G	19.3%	H264H (CAT→CAC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,743	A→G	21.4%	V261V (GTT→GTC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,776	C→A	22.1%	P250P (CCG→CCT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,779	G→C	22.5%	A249A (GCC→GCG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,782	G→A	22.0%	H248H (CAC→CAT) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,784	G→T	22.0%	H248N (CAC→AAC) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,797	C→T	23.2%	E243E (GAG→GAA)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,809	G→A	22.1%	R239R (CGC→CGT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,812	C→G	21.3%	V238V (GTG→GTC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,815	A→G	21.4%	R237R (CGT→CGC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,821	G→T	20.0%	A235A (GCC→GCA)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,827	G→A	18.0%	V233V (GTC→GTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,833	C→G	17.9%	V231V (GTG→GTC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,836	G→A	16.9%	F230F (TTC→TTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,845	C→A	15.5%	V227V (GTG→GTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,848	G→A	15.6%	F226F (TTC→TTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,854	C→A	14.9%	S224S (TCG→TCT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,860	G→A	13.5%	S222S (TCC→TCT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,866	G→C	12.8%	T220T (ACC→ACG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,878	T→C	5.6%	V216V (GTA→GTG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,378,122	T→C	8.1%	Q471Q (CAA→CAG)	dnaK ←	chaperone protein DnaK
RA	5,378,125	C→T	8.2%	P470P (CCG→CCA)	dnaK ←	chaperone protein DnaK
RA	5,378,128	C→A	8.0%	V469V (GTG→GTT)	dnaK ←	chaperone protein DnaK
RA	5,378,134	G→A	7.9%	R467R (CGC→CGT)	dnaK ←	chaperone protein DnaK
RA	5,378,143	T→C	8.0%	P464P (CCA→CCG)	dnaK ←	chaperone protein DnaK
RA	5,378,153	T→C	9.3%	D461G (GAC→GGC)	dnaK ←	chaperone protein DnaK
RA	5,378,156	G→A	9.6%	A460V (GCT→GTT)	dnaK ←	chaperone protein DnaK
RA	5,378,158	C→G	9.4%	L459L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,378,169	T→G	11.7%	K456Q (AAG→CAG)	dnaK ←	chaperone protein DnaK
RA	5,378,173	C→G	11.7%	L454L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,378,176	C→G	11.9%	S453S (TCG→TCC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,177	G→A	11.9%	S453L (TCG→TTG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,178	A→T	12.0%	S453T (TCG→ACG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,185	C→G	11.9%	Q450H (CAG→CAC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,187	G→C	12.1%	Q450E (CAG→GAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,188	C→G	12.1%	A449A (GCG→GCC)	dnaK ←	chaperone protein DnaK
RA	5,378,195	T→A	8.9%	Q447L (CAG→CTG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,196	G→T	8.2%	Q447K (CAG→AAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,197	C→T	8.4%	K446K (AAG→AAA) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,199	T→C	8.4%	K446E (AAG→GAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,206	A→G	7.9%	G443G (GGT→GGC)	dnaK ←	chaperone protein DnaK
RA	5,378,209	T→C	7.9%	Q442Q (CAA→CAG)	dnaK ←	chaperone protein DnaK
RA	5,378,212	C→G	8.3%	L441L (CTG→CTC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,214	G→A	8.3%	L441L (CTG→TTG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,219	T→C	8.5%	H439R (CAC→CGC)	dnaK ←	chaperone protein DnaK
RA	5,378,221	A→G	8.6%	I438I (ATT→ATC)	dnaK ←	chaperone protein DnaK
RA	5,378,224	G→C	8.6%	T437T (ACC→ACG)	dnaK ←	chaperone protein DnaK
RA	5,378,233	G→C	7.7%	S434R (AGC→AGG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,234	C→G	7.8%	S434T (AGC→ACC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,235	T→A	7.5%	S434C (AGC→TGC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,239	G→A	7.5%	N432N (AAC→AAT)	dnaK ←	chaperone protein DnaK
RA	5,378,245	G→T	8.1%	D430E (GAC→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,248	G→A	8.0%	A429A (GCC→GCT)	dnaK ←	chaperone protein DnaK
RA	5,378,251	A→G	7.8%	T428T (ACT→ACC)	dnaK ←	chaperone protein DnaK
RA	5,378,260	C→G	8.1%	V425V (GTG→GTC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,261	A→G	8.1%	V425A (GTG→GCG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,262	C→T	8.2%	V425M (GTG→ATG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,284	G→C	9.0%	T417T (ACC→ACG)	dnaK ←	chaperone protein DnaK
RA	5,378,287	G→C	8.5%	T416T (ACC→ACG)	dnaK ←	chaperone protein DnaK
RA	5,378,293	C→G	8.4%	K414N (AAG→AAC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,294	T→C	7.9%	K414R (AAG→AGG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,295	T→G	7.9%	K414Q (AAG→CAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,296	C→T	8.5%	E413E (GAG→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,305	C→G	5.2%	A410A (GCG→GCC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,306	G→C	5.2%	A410G (GCG→GGG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,307	C→G	5.2%	A410P (GCG→CCG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,311	C→G	5.3%	M408I (ATG→ATC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,313	T→A	5.3%	M408L (ATG→TTG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,320	G→A	5.1%	G405G (GGC→GGT)	dnaK ←	chaperone protein DnaK
RA	5,378,351	C→G	5.2%	S395T (AGC→ACC)	dnaK ←	chaperone protein DnaK
RA	5,378,353	G→C	5.2%	V394V (GTC→GTG)	dnaK ←	chaperone protein DnaK
RA	5,378,359	C→G	5.4%	L392L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,378,368	G→A	5.1%	V389V (GTC→GTT)	dnaK ←	chaperone protein DnaK
RA	5,378,695	G→T	5.7%	D280E (GAC→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,702	G→T	6.1%	S278* (TCG→TAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,703	A→G	6.0%	S278P (TCG→CCG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,716	C→A	9.3%	L273L (CTG→CTT)	dnaK ←	chaperone protein DnaK
RA	5,378,737	T→G	10.2%	A266A (GCA→GCC)	dnaK ←	chaperone protein DnaK
RA	5,378,740	G→A	10.2%	A265A (GCC→GCT)	dnaK ←	chaperone protein DnaK
RA	5,378,746	T→C	10.5%	K263K (AAA→AAG)	dnaK ←	chaperone protein DnaK
RA	5,378,749	C→G	9.8%	L262L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,378,752	A→G	9.8%	R261R (CGT→CGC)	dnaK ←	chaperone protein DnaK
RA	5,378,761	G→A	10.4%	A258A (GCC→GCT)	dnaK ←	chaperone protein DnaK
RA	5,378,764	C→A	10.4%	L257L (CTG→CTT)	dnaK ←	chaperone protein DnaK
RA	5,378,767	A→C	10.8%	P256P (CCT→CCG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,768	G→T	10.8%	P256H (CCT→CAT) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,769	G→T	10.5%	P256T (CCT→ACT) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,770	A→G	10.5%	D255D (GAT→GAC)	dnaK ←	chaperone protein DnaK
RA	5,378,773	G→T	10.8%	N254K (AAC→AAA)	dnaK ←	chaperone protein DnaK
RA	5,378,779	C→A	10.9%	L252L (CTG→CTT)	dnaK ←	chaperone protein DnaK
RA	5,378,782	G→A	10.5%	D251D (GAC→GAT)	dnaK ←	chaperone protein DnaK
RA	5,378,785	C→G	10.8%	M250I (ATG→ATC)	dnaK ←	chaperone protein DnaK
RA	5,378,792	G→T	9.8%	S248* (TCG→TAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,793	A→G	9.7%	S248P (TCG→CCG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,794	C→T	9.9%	E247E (GAG→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,797	T→C	10.7%	K246K (AAA→AAG)	dnaK ←	chaperone protein DnaK
RA	5,378,810	T→G	8.2%	D242A (GAC→GCC)	dnaK ←	chaperone protein DnaK
RA	5,378,812	G→A	8.2%	V241V (GTC→GTT)	dnaK ←	chaperone protein DnaK
RA	5,378,815	A→C	8.9%	L240L (CTT→CTG)	dnaK ←	chaperone protein DnaK
RA	5,378,818	G→A	7.8%	Y239Y (TAC→TAT)	dnaK ←	chaperone protein DnaK
RA	5,378,821	G→T	8.0%	D238E (GAC→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,826	T→C	7.9%	I237V (ATC→GTC)	dnaK ←	chaperone protein DnaK
RA	5,378,830	G→A	6.5%	R235R (CGC→CGT)	dnaK ←	chaperone protein DnaK
RA	5,399,627	A→T	7.1%	L223F (TTA→TTT)	hsdS →	type I restriction modification system specificity protein
RA	5,419,176	G→A	5.3%	R160C (CGC→TGC)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,420,788	G→T	11.1%	P85T (CCT→ACT)	PP_4758 ←	MFS transporter
RA	5,420,789	T→A	10.6%	V84V (GTA→GTT) ‡	PP_4758 ←	MFS transporter
RA	5,420,790	A→C	11.1%	V84G (GTA→GGA) ‡	PP_4758 ←	MFS transporter
RA	5,432,362	A→G	9.0%	intergenic (‑74/+87)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,366	A→G	8.3%	intergenic (‑78/+83)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,367:1	+A	8.1%	intergenic (‑79/+82)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,374	Δ1 bp	7.6%	intergenic (‑86/+75)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,376	C→T	7.7%	intergenic (‑88/+73)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,380	C→T	7.8%	intergenic (‑92/+69)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,448,259	T→G	11.9%	L145R (CTG→CGG)	thiE →	thiamine‑phosphate synthase
RA	5,448,268	A→C	17.0%	Q148P (CAG→CCG)	thiE →	thiamine‑phosphate synthase
RA	5,487,120	A→G	20.5%	intergenic (+56/‑91)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,123	A→G	23.7%	intergenic (+59/‑88)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,124	T→C	21.4%	intergenic (+60/‑87)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,129	G→A	22.5%	intergenic (+65/‑82)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,132	T→C	22.9%	intergenic (+68/‑79)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,137	G→A	20.2%	intergenic (+73/‑74)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,138	C→T	16.8%	intergenic (+74/‑73)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,141	C→T	17.9%	intergenic (+77/‑70)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,799	A→T	5.4%	I197F (ATC→TTC)	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,487,802	G→T	5.2%	V198F (GTC→TTC) ‡	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,487,803	T→G	5.1%	V198G (GTC→GGC) ‡	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,487,808	G→T	5.0%	V200F (GTC→TTC)	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,487,813	C→T	5.3%	D201D (GAC→GAT)	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,487,821	A→C	5.0%	N204T (AAT→ACT)	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,487,879	C→T	5.1%	G223G (GGC→GGT)	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,494,824	C→T	7.1%	V388M (GTG→ATG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,826	G→A	6.7%	A387V (GCG→GTG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,831	C→A	6.5%	S385S (TCG→TCT) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,832	G→T	6.7%	S385* (TCG→TAG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,833	A→C	6.4%	S385A (TCG→GCG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,841	T→G	6.4%	Q382P (CAA→CCA) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,842	G→A	6.5%	Q382* (CAA→TAA) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,843	G→A	6.5%	A381A (GCC→GCT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,849	C→G	6.6%	L379L (CTG→CTC)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,855	G→A	6.3%	F377F (TTC→TTT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,858	G→T	6.2%	A376A (GCC→GCA)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,864	T→G	6.4%	R374R (CGA→CGC)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,867	G→T	6.4%	A373A (GCC→GCA)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,870	G→A	6.5%	R372R (CGC→CGT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,879	C→T	6.9%	E369E (GAG→GAA)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,882	T→C	6.9%	E368E (GAA→GAG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,888	G→A	6.3%	N366N (AAC→AAT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,897	G→C	6.8%	C363W (TGC→TGG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,898	C→A	6.8%	C363F (TGC→TTC) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,899	A→T	6.6%	C363S (TGC→AGC) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,900	G→A	6.8%	H362H (CAC→CAT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,903	C→G	6.8%	L361L (CTG→CTC) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,905	G→T	6.7%	L361M (CTG→ATG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,906	C→G	6.4%	V360V (GTG→GTC) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,908	C→T	6.4%	V360M (GTG→ATG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,916	C→T	6.5%	G357D (GGC→GAC)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,918	G→C	6.6%	R356R (CGC→CGG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,510,677	C→T	6.2%	G104G (GGC→GGT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,686	A→G	9.1%	T107T (ACA→ACG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,689	C→G	9.2%	S108S (TCC→TCG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,701	G→A	12.7%	K112K (AAG→AAA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,704	T→G	12.7%	S113S (TCT→TCG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,710	G→C	12.4%	L115L (CTG→CTC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,716	G→C	12.4%	V117V (GTG→GTC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,720	G→A	12.7%	E119K (GAA→AAA) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,722	A→G	12.7%	E119E (GAA→GAG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,732	G→A	12.1%	G123S (GGC→AGC) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,733	G→A	12.1%	G123D (GGC→GAC) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,734	C→T	11.6%	G123G (GGC→GGT) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,735	C→A	11.4%	L124M (CTG→ATG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,737	G→T	11.6%	L124L (CTG→CTT) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,761	G→A	11.0%	E132E (GAG→GAA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,764	C→T	10.9%	G133G (GGC→GGT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,767	A→G	9.7%	E134E (GAA→GAG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,770	G→A	9.7%	E135E (GAG→GAA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,771	A→T	9.7%	M136L (ATG→TTG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,772	T→C	9.4%	M136T (ATG→ACG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,773	G→C	9.5%	M136I (ATG→ATC) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,774	T→G	9.3%	S137A (TCG→GCG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,775	C→A	9.6%	S137* (TCG→TAG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,778	C→G	9.8%	P138R (CCG→CGG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,779	G→C	9.6%	P138P (CCG→CCC) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,785	G→T	9.8%	V140V (GTG→GTT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,791	C→T	10.0%	Y142Y (TAC→TAT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,794	A→G	9.8%	T143T (ACA→ACG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,800	C→G	10.1%	A145A (GCC→GCG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,803	C→A	9.6%	A146A (GCC→GCA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,815	A→G	9.5%	Q150Q (CAA→CAG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,818	C→A	8.2%	A151A (GCC→GCA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,824	G→T	6.5%	P153P (CCG→CCT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,827	C→T	6.4%	A154A (GCC→GCT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,830	G→T	5.3%	V155V (GTG→GTT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,511,415	A→T	7.4%	A350A (GCA→GCT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,511,419	G→C	7.6%	A352P (GCC→CCC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,511,424	G→C	8.3%	G353G (GGG→GGC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,511,428	A→T	8.8%	S355C (AGC→TGC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,511,875	T→G	14.1%	L35R (CTG→CGG)	urtB →	urea ABC transporter permease
RA	5,539,045	G→C	11.4%	intergenic (+52/+51)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,540,539	A→T	5.4%	intergenic (+59/+62)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,540,544	A→T	6.1%	intergenic (+64/+57)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,551,575	T→A	5.6%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,551,576	T→A	5.5%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,554,883	T→G	5.5%	intergenic (+576/+85)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,554,885	C→A	6.9%	intergenic (+578/+83)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,567,722	G→A	7.9%	H579H (CAC→CAT)	mutL ←	DNA mismatch repair protein MutL
RA	5,567,727	A→T	8.0%	C578S (TGC→AGC)	mutL ←	DNA mismatch repair protein MutL
RA	5,567,728	A→T	8.8%	A577A (GCT→GCA)	mutL ←	DNA mismatch repair protein MutL
RA	5,567,733	T→C	9.3%	M576V (ATG→GTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,589,781	T→C	5.8%	K447R (AAG→AGG)	parE ←	DNA topoisomerase IV subunit B
RA	5,589,788	G→T	6.6%	R445S (CGC→AGC)	parE ←	DNA topoisomerase IV subunit B
RA	5,589,789	C→G	6.9%	L444L (CTG→CTC) ‡	parE ←	DNA topoisomerase IV subunit B
RA	5,589,790	A→C	6.4%	L444R (CTG→CGG) ‡	parE ←	DNA topoisomerase IV subunit B
RA	5,589,797	G→A	5.6%	L442L (CTG→TTG)	parE ←	DNA topoisomerase IV subunit B
RA	5,596,082	T→A	6.0%	intergenic (‑56/+89)	PP_4921 ← / ← thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
RA	5,596,083	T→A	5.9%	intergenic (‑57/+88)	PP_4921 ← / ← thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
RA	5,610,266:1	+A	5.7%	intergenic (‑155/+33)	cyaB ← / ← waaA	cyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,610,267	T→A	5.5%	intergenic (‑156/+32)	cyaB ← / ← waaA	cyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,610,273	G→C	6.2%	intergenic (‑162/+26)	cyaB ← / ← waaA	cyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,610,280	T→A	5.7%	intergenic (‑169/+19)	cyaB ← / ← waaA	cyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,610,967	G→C	6.4%	R202G (CGC→GGC)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,610,970	C→G	6.0%	E201Q (GAG→CAG)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,610,973	G→C	6.2%	P200A (CCT→GCT)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,624,905	A→C	7.2%	M269R (ATG→AGG) ‡	PP_4941 ←	hypothetical protein
RA	5,624,906	T→A	7.0%	M269L (ATG→TTG) ‡	PP_4941 ←	hypothetical protein
RA	5,624,907	G→T	5.7%	A268A (GCC→GCA)	PP_4941 ←	hypothetical protein
RA	5,625,818	G→C	5.9%	A262A (GCC→GCG)	PP_4942 ←	hypothetical protein
RA	5,634,802	G→A	10.1%	V787M (GTG→ATG) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,804	G→T	9.9%	V787V (GTG→GTT) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,807	C→A	9.9%	A788A (GCC→GCA)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,813	C→A	9.9%	A790A (GCC→GCA)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,816	G→T	9.5%	L791L (CTG→CTT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,818	C→T	9.7%	A792V (GCT→GTT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,822	C→T	9.9%	A793A (GCC→GCT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,828	C→T	9.7%	N795N (AAC→AAT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,834	A→T	9.5%	V797V (GTA→GTT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,840	C→A	9.9%	A799A (GCC→GCA)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,852	G→A	9.6%	E803E (GAG→GAA)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,853	C→G	9.7%	Q804E (CAA→GAA)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,861	A→G	10.1%	P806P (CCA→CCG)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,867	C→T	10.0%	I808I (ATC→ATT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,870	C→A	9.9%	A809A (GCC→GCA)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,873	C→G	9.8%	A810A (GCC→GCG)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,878	C→G	9.4%	A812G (GCC→GGC)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,882	G→T	9.5%	V813V (GTG→GTT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,886	C→A	10.6%	L815M (CTG→ATG) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,888	G→T	10.4%	L815L (CTG→CTT) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,893	T→A	9.9%	L817Q (CTG→CAG) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,894	G→C	10.6%	L817L (CTG→CTC) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,897	A→T	10.1%	E818D (GAA→GAT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,636,430	T→G	6.2%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,636,431	C→A	6.4%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,643,428	C→G	5.3%	S373C (TCC→TGC)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,645,234	G→A	8.2%	intergenic (+46/‑77)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,235	C→T	8.1%	intergenic (+47/‑76)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,236	A→G	8.3%	intergenic (+48/‑75)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,240	A→C	8.9%	intergenic (+52/‑71)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,243	G→T	8.3%	intergenic (+55/‑68)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,247	C→T	8.0%	intergenic (+59/‑64)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,248	A→G	7.7%	intergenic (+60/‑63)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,249	T→C	7.8%	intergenic (+61/‑62)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,648,239	A→T	6.4%	D540V (GAC→GTC)	PP_4954 →	membrane protein
RA	5,653,347	T→G	8.0%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,653,350	C→A	7.9%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,657,599:1	+A	29.7%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,657,604	T→G	36.9%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,657,609	C→A	36.7%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,657,614	Δ1 bp	30.8%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,660,095	C→T	5.3%	L59L (CTC→CTT)	sahR →	methionine metabolism transcriptional regulator
RA	5,660,096	A→G	5.3%	K60E (AAG→GAG)	sahR →	methionine metabolism transcriptional regulator
RA	5,669,231	G→T	5.6%	intergenic (+36/+35)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,669,232	A→C	5.8%	intergenic (+37/+34)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,669,242	G→T	5.4%	intergenic (+47/+24)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,673,639	T→G	7.1%	intergenic (+85/‑85)	PP_4978 → / → PP_4979	hypothetical protein/substrate‑binding protein
RA	5,673,641	C→A	6.3%	intergenic (+87/‑83)	PP_4978 → / → PP_4979	hypothetical protein/substrate‑binding protein
RA	5,681,112	A→G	5.1%	D255G (GAC→GGC)	bioA →	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
RA	5,687,878	G→C	5.8%	P331P (CCC→CCG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,687,880	G→C	6.0%	P331A (CCC→GCC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,687,887	G→C	6.4%	R328R (CGC→CGG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,687,889	G→C	6.1%	R328G (CGC→GGC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,699,292	C→A	6.4%	intergenic (+24/‑53)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,699,294	G→C	6.5%	intergenic (+26/‑51)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,699,296	T→G	7.3%	intergenic (+28/‑49)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,699,387	C→T	6.5%	H15Y (CAC→TAC) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,388	A→T	6.4%	H15L (CAC→CTC) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,402	G→A	10.6%	D20N (GAC→AAC)	hslU →	protease HslVU ATPase subunit
RA	5,699,425	C→T	13.2%	A27A (GCC→GCT)	hslU →	protease HslVU ATPase subunit
RA	5,699,431	C→T	13.4%	A29A (GCC→GCT)	hslU →	protease HslVU ATPase subunit
RA	5,699,440	C→T	13.2%	N32N (AAC→AAT)	hslU →	protease HslVU ATPase subunit
RA	5,699,449	G→T	13.4%	R35R (CGG→CGT)	hslU →	protease HslVU ATPase subunit
RA	5,699,452	C→T	12.3%	R36R (CGC→CGT)	hslU →	protease HslVU ATPase subunit
RA	5,699,453	A→C	12.2%	M37L (ATG→CTG) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,454	T→A	11.8%	M37K (ATG→AAG) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,461	C→G	12.1%	L39L (CTC→CTG)	hslU →	protease HslVU ATPase subunit
RA	5,699,462	C→G	12.1%	P40A (CCT→GCT) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,463	C→A	12.1%	P40H (CCT→CAT) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,464	T→A	11.4%	P40P (CCT→CCA) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,466	C→G	11.7%	A41G (GCC→GGC)	hslU →	protease HslVU ATPase subunit
RA	5,699,468	G→C	11.3%	E42Q (GAG→CAG)	hslU →	protease HslVU ATPase subunit
RA	5,699,471	C→A	10.9%	L43M (CTG→ATG)	hslU →	protease HslVU ATPase subunit
RA	5,699,476	T→C	11.8%	R44R (CGT→CGC)	hslU →	protease HslVU ATPase subunit
RA	5,699,478	C→A	11.8%	A45D (GCC→GAC) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,479	C→A	11.8%	A45A (GCC→GCA) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,482	A→G	11.6%	E46E (GAA→GAG)	hslU →	protease HslVU ATPase subunit
RA	5,699,487	C→T	11.4%	T48I (ACC→ATC) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,488	C→G	11.4%	T48T (ACC→ACG) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,491	C→A	11.6%	P49P (CCC→CCA)	hslU →	protease HslVU ATPase subunit
RA	5,699,500	C→T	11.1%	I52I (ATC→ATT)	hslU →	protease HslVU ATPase subunit
RA	5,699,512	C→A	7.2%	G56G (GGC→GGA)	hslU →	protease HslVU ATPase subunit
RA	5,699,515	T→G	7.3%	P57P (CCT→CCG)	hslU →	protease HslVU ATPase subunit
RA	5,699,524	C→T	7.3%	V60V (GTC→GTT)	hslU →	protease HslVU ATPase subunit
RA	5,699,533	C→G	5.8%	T63T (ACC→ACG)	hslU →	protease HslVU ATPase subunit
RA	5,706,513	G→A	5.4%	intergenic (+60/+52)	PP_5006 → / ← PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
RA	5,706,515	T→G	5.5%	intergenic (+62/+50)	PP_5006 → / ← PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
RA	5,706,516	T→C	5.6%	intergenic (+63/+49)	PP_5006 → / ← PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
RA	5,706,518	G→C	5.7%	intergenic (+65/+47)	PP_5006 → / ← PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
RA	5,706,520	G→A	5.7%	intergenic (+67/+45)	PP_5006 → / ← PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
RA	5,706,521	C→A	7.3%	intergenic (+68/+44)	PP_5006 → / ← PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
RA	5,706,523	T→C	5.7%	intergenic (+70/+42)	PP_5006 → / ← PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
RA	5,726,259	T→A	14.6%	intergenic (‑183/+111)	PP_5024 ← / ← opgH	amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H
RA	5,728,782:1	+G	6.8%	coding (162/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,728,787	Δ1 bp	6.7%	coding (157/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,738,862	G→T	5.7%	L188M (CTG→ATG)	hutU ←	urocanate hydratase
RA	5,738,864	G→A	5.4%	T187I (ACC→ATC) ‡	hutU ←	urocanate hydratase
RA	5,738,865	T→C	5.4%	T187A (ACC→GCC) ‡	hutU ←	urocanate hydratase
RA	5,738,866	C→G	5.4%	A186A (GCG→GCC)	hutU ←	urocanate hydratase
RA	5,738,869	G→T	5.4%	A185A (GCC→GCA)	hutU ←	urocanate hydratase
RA	5,738,872	C→G	5.4%	L184L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,738,875	T→A	5.8%	P183P (CCA→CCT)	hutU ←	urocanate hydratase
RA	5,738,881	G→T	5.6%	A181A (GCC→GCA)	hutU ←	urocanate hydratase
RA	5,738,884	G→T	5.7%	G180G (GGC→GGA)	hutU ←	urocanate hydratase
RA	5,738,899	C→A	12.6%	L175L (CTG→CTT)	hutU ←	urocanate hydratase
RA	5,738,906	G→C	16.2%	A173G (GCT→GGT)	hutU ←	urocanate hydratase
RA	5,738,911	G→C	18.7%	L171L (CTC→CTG)	hutU ←	urocanate hydratase
RA	5,738,914	T→A	19.3%	V170V (GTA→GTT) ‡	hutU ←	urocanate hydratase
RA	5,738,916	C→T	19.4%	V170I (GTA→ATA) ‡	hutU ←	urocanate hydratase
RA	5,738,920	C→T	19.3%	K168K (AAG→AAA)	hutU ←	urocanate hydratase
RA	5,738,926	T→C	18.7%	K166K (AAA→AAG)	hutU ←	urocanate hydratase
RA	5,738,929	C→G	18.8%	L165L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,738,933	C→T	21.4%	S164N (AGC→AAC)	hutU ←	urocanate hydratase
RA	5,738,939	C→T	22.1%	G162D (GGC→GAC)	hutU ←	urocanate hydratase
RA	5,738,941	G→A	22.4%	Y161Y (TAC→TAT)	hutU ←	urocanate hydratase
RA	5,738,944	G→A	22.4%	H160H (CAC→CAT)	hutU ←	urocanate hydratase
RA	5,738,962	G→C	28.8%	V154V (GTC→GTG)	hutU ←	urocanate hydratase
RA	5,738,986	G→A	35.9%	V146V (GTC→GTT)	hutU ←	urocanate hydratase
RA	5,738,989	G→A	36.1%	I145I (ATC→ATT)	hutU ←	urocanate hydratase
RA	5,738,998	G→T	33.2%	S142R (AGC→AGA) ‡	hutU ←	urocanate hydratase
RA	5,738,999	C→G	33.1%	S142T (AGC→ACC) ‡	hutU ←	urocanate hydratase
RA	5,739,000	T→C	33.5%	S142G (AGC→GGC) ‡	hutU ←	urocanate hydratase
RA	5,739,001	G→A	32.9%	G141G (GGC→GGT)	hutU ←	urocanate hydratase
RA	5,739,010	G→A	36.1%	I138I (ATC→ATT)	hutU ←	urocanate hydratase
RA	5,739,016	G→C	34.8%	S136R (AGC→AGG) ‡	hutU ←	urocanate hydratase
RA	5,739,017	C→G	34.9%	S136T (AGC→ACC) ‡	hutU ←	urocanate hydratase
RA	5,739,018	T→A	35.2%	S136C (AGC→TGC) ‡	hutU ←	urocanate hydratase
RA	5,739,019	G→A	35.1%	G135G (GGC→GGT)	hutU ←	urocanate hydratase
RA	5,739,043	C→G	33.7%	A127A (GCG→GCC)	hutU ←	urocanate hydratase
RA	5,739,046	C→G	31.1%	L126L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,049	G→A	29.5%	G125G (GGC→GGT)	hutU ←	urocanate hydratase
RA	5,739,055	G→C	27.8%	A123A (GCC→GCG) ‡	hutU ←	urocanate hydratase
RA	5,739,056	G→T	27.7%	A123D (GCC→GAC) ‡	hutU ←	urocanate hydratase
RA	5,739,057	C→T	27.5%	A123T (GCC→ACC) ‡	hutU ←	urocanate hydratase
RA	5,739,058	G→A	27.5%	D122D (GAC→GAT)	hutU ←	urocanate hydratase
RA	5,739,064	T→C	27.3%	E120E (GAA→GAG)	hutU ←	urocanate hydratase
RA	5,739,073	G→A	27.1%	H117H (CAC→CAT)	hutU ←	urocanate hydratase
RA	5,739,076	T→A	27.7%	E116D (GAA→GAT)	hutU ←	urocanate hydratase
RA	5,739,083	T→G	24.6%	N114T (AAC→ACC)	hutU ←	urocanate hydratase
RA	5,739,085	G→C	24.9%	A113A (GCC→GCG)	hutU ←	urocanate hydratase
RA	5,739,091	G→A	22.7%	H111H (CAC→CAT)	hutU ←	urocanate hydratase
RA	5,739,094	T→C	23.1%	P110P (CCA→CCG)	hutU ←	urocanate hydratase
RA	5,739,100	C→G	21.7%	L108L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,103	G→A	20.2%	N107N (AAC→AAT)	hutU ←	urocanate hydratase
RA	5,739,109	G→A	20.4%	N105N (AAC→AAT)	hutU ←	urocanate hydratase
RA	5,739,115	A→G	18.4%	I103I (ATT→ATC)	hutU ←	urocanate hydratase
RA	5,739,118	C→G	16.7%	L102L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,121	C→A	16.8%	V101V (GTG→GTT)	hutU ←	urocanate hydratase
RA	5,739,133	G→A	16.7%	N97N (AAC→AAT) ‡	hutU ←	urocanate hydratase
RA	5,739,135	T→C	16.7%	N97D (AAC→GAC) ‡	hutU ←	urocanate hydratase
RA	5,739,136	G→C	16.8%	S96R (AGC→AGG) ‡	hutU ←	urocanate hydratase
RA	5,739,137	C→T	16.8%	S96N (AGC→AAC) ‡	hutU ←	urocanate hydratase
RA	5,739,145	C→G	16.2%	K93N (AAG→AAC) ‡	hutU ←	urocanate hydratase
RA	5,739,146	T→C	16.6%	K93R (AAG→AGG) ‡	hutU ←	urocanate hydratase
RA	5,739,147	T→G	16.7%	K93Q (AAG→CAG) ‡	hutU ←	urocanate hydratase
RA	5,739,154	A→G	17.6%	G90G (GGT→GGC)	hutU ←	urocanate hydratase
RA	5,739,157	G→C	17.2%	V89V (GTC→GTG)	hutU ←	urocanate hydratase
RA	5,739,183	G→A	11.0%	L81L (CTG→TTG)	hutU ←	urocanate hydratase
RA	5,739,193	G→T	10.1%	D77E (GAC→GAA)	hutU ←	urocanate hydratase
RA	5,739,196	T→A	9.8%	E76D (GAA→GAT) ‡	hutU ←	urocanate hydratase
RA	5,739,198	C→T	9.7%	E76K (GAA→AAA) ‡	hutU ←	urocanate hydratase
RA	5,739,199	C→G	9.7%	L75L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,202	G→C	9.7%	R74R (CGC→CGG) ‡	hutU ←	urocanate hydratase
RA	5,739,204	G→T	9.9%	R74S (CGC→AGC) ‡	hutU ←	urocanate hydratase
RA	5,739,205	G→C	9.9%	T73T (ACC→ACG) ‡	hutU ←	urocanate hydratase
RA	5,739,206	G→T	9.9%	T73N (ACC→AAC) ‡	hutU ←	urocanate hydratase
RA	5,739,208	C→G	9.8%	L72L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,214	T→C	9.4%	E70E (GAA→GAG) ‡	hutU ←	urocanate hydratase
RA	5,739,215	T→G	9.4%	E70A (GAA→GCA) ‡	hutU ←	urocanate hydratase
RA	5,739,220	G→A	9.9%	I68I (ATC→ATT)	hutU ←	urocanate hydratase
RA	5,739,230	T→A	9.4%	Y65F (TAC→TTC)	hutU ←	urocanate hydratase
RA	5,739,232	G→A	9.2%	C64C (TGC→TGT) ‡	hutU ←	urocanate hydratase
RA	5,739,233	C→T	9.2%	C64Y (TGC→TAC) ‡	hutU ←	urocanate hydratase
RA	5,739,234	A→C	9.0%	C64G (TGC→GGC) ‡	hutU ←	urocanate hydratase
RA	5,739,235	G→A	9.0%	A63A (GCC→GCT) ‡	hutU ←	urocanate hydratase
RA	5,739,236	G→T	8.8%	A63D (GCC→GAC) ‡	hutU ←	urocanate hydratase
RA	5,739,241	G→T	8.2%	N61K (AAC→AAA) ‡	hutU ←	urocanate hydratase
RA	5,739,242	T→G	8.4%	N61T (AAC→ACC) ‡	hutU ←	urocanate hydratase
RA	5,739,250	G→A	8.7%	A58A (GCC→GCT)	hutU ←	urocanate hydratase
RA	5,739,259	G→A	8.3%	I55I (ATC→ATT)	hutU ←	urocanate hydratase
RA	5,739,262	A→G	7.7%	G54G (GGT→GGC)	hutU ←	urocanate hydratase
RA	5,739,268	G→A	6.9%	Y52Y (TAC→TAT)	hutU ←	urocanate hydratase
RA	5,739,271	T→G	6.3%	V51V (GTA→GTC)	hutU ←	urocanate hydratase
RA	5,739,274	C→G	6.3%	V50V (GTG→GTC)	hutU ←	urocanate hydratase
RA	5,739,577	G→C	6.5%	intergenic (‑154/+48)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,739,580	G→C	6.6%	intergenic (‑157/+45)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,742,445	T→G	32.8%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,448	A→T	23.6%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,449	A→T	24.2%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,452	C→A	23.3%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,462	T→C	13.5%	intergenic (+49/+22)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,743,862	G→C	6.4%	D90E (GAC→GAG) ‡	PP_5039 ←	hypothetical protein
RA	5,743,863	T→G	6.8%	D90A (GAC→GCC) ‡	PP_5039 ←	hypothetical protein
RA	5,743,868	C→T	7.2%	E88E (GAG→GAA)	PP_5039 ←	hypothetical protein
RA	5,743,873	A→G	5.0%	F87L (TTC→CTC)	PP_5039 ←	hypothetical protein
RA	5,743,878	C→A	5.2%	R85L (CGC→CTC)	PP_5039 ←	hypothetical protein
RA	5,745,338	C→T	11.5%	intergenic (‑193/+54)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,340	T→C	11.3%	intergenic (‑195/+52)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,341	G→A	10.7%	intergenic (‑196/+51)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,343	A→G	11.6%	intergenic (‑198/+49)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,753,697	G→T	14.0%	intergenic (‑157/‑314)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,703	A→G	18.8%	intergenic (‑163/‑308)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,707	G→T	16.7%	intergenic (‑167/‑304)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,708	G→T	16.6%	intergenic (‑168/‑303)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,713	A→C	16.7%	intergenic (‑173/‑298)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,714	A→C	17.3%	intergenic (‑174/‑297)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,718	C→T	17.8%	intergenic (‑178/‑293)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,724	A→C	14.4%	intergenic (‑184/‑287)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,754,841	C→A	9.4%	D277E (GAC→GAA)	glnA →	glutamine synthetase
RA	5,754,848	A→C	9.4%	N280H (AAC→CAC) ‡	glnA →	glutamine synthetase
RA	5,754,849	A→C	9.7%	N280T (AAC→ACC) ‡	glnA →	glutamine synthetase
RA	5,754,850	C→A	9.7%	N280K (AAC→AAA) ‡	glnA →	glutamine synthetase
RA	5,754,853	C→G	9.6%	T281T (ACC→ACG)	glnA →	glutamine synthetase
RA	5,754,856	C→T	9.7%	F282F (TTC→TTT)	glnA →	glutamine synthetase
RA	5,754,857	T→G	9.7%	S283A (TCG→GCG) ‡	glnA →	glutamine synthetase
RA	5,754,859	G→T	9.5%	S283S (TCG→TCT) ‡	glnA →	glutamine synthetase
RA	5,754,863	G→A	9.8%	E285K (GAA→AAA) ‡	glnA →	glutamine synthetase
RA	5,754,865	A→C	10.1%	E285D (GAA→GAC) ‡	glnA →	glutamine synthetase
RA	5,754,867	G→A	10.1%	G286D (GGC→GAC) ‡	glnA →	glutamine synthetase
RA	5,754,868	C→A	9.8%	G286G (GGC→GGA) ‡	glnA →	glutamine synthetase
RA	5,754,883	C→G	13.3%	S291S (TCC→TCG)	glnA →	glutamine synthetase
RA	5,754,886	C→A	13.4%	D292E (GAC→GAA)	glnA →	glutamine synthetase
RA	5,754,888	C→A	13.5%	T293N (ACC→AAC)	glnA →	glutamine synthetase
RA	5,754,890	G→T	13.2%	A294S (GCC→TCC) ‡	glnA →	glutamine synthetase
RA	5,754,891	C→G	14.5%	A294G (GCC→GGC) ‡	glnA →	glutamine synthetase
RA	5,754,897	A→T	15.9%	Y296F (TAC→TTC)	glnA →	glutamine synthetase
RA	5,754,910	T→C	17.6%	G300G (GGT→GGC)	glnA →	glutamine synthetase
RA	5,754,911	A→G	19.6%	I301V (ATC→GTC)	glnA →	glutamine synthetase
RA	5,754,924	G→C	18.7%	G305A (GGT→GCT) ‡	glnA →	glutamine synthetase
RA	5,754,925	T→C	18.6%	G305G (GGT→GGC) ‡	glnA →	glutamine synthetase
RA	5,754,931	C→T	18.6%	A307A (GCC→GCT)	glnA →	glutamine synthetase
RA	5,754,932	C→G	18.7%	L308V (CTG→GTG)	glnA →	glutamine synthetase
RA	5,754,939	G→C	18.4%	G310A (GGC→GCC) ‡	glnA →	glutamine synthetase
RA	5,754,940	C→A	19.6%	G310G (GGC→GGA) ‡	glnA →	glutamine synthetase
RA	5,754,964	G→C	15.9%	S318S (TCG→TCC)	glnA →	glutamine synthetase
RA	5,754,967	C→T	14.9%	Y319Y (TAC→TAT)	glnA →	glutamine synthetase
RA	5,754,985	C→T	9.5%	G325G (GGC→GGT)	glnA →	glutamine synthetase
RA	5,754,987	T→A	9.6%	F326Y (TTC→TAC) ‡	glnA →	glutamine synthetase
RA	5,754,988	C→T	9.1%	F326F (TTC→TTT) ‡	glnA →	glutamine synthetase
RA	5,754,994	C→T	9.5%	A328A (GCC→GCT)	glnA →	glutamine synthetase
RA	5,755,000	A→T	8.8%	V330V (GTA→GTT)	glnA →	glutamine synthetase
RA	5,755,001	A→C	8.9%	M331L (ATG→CTG)	glnA →	glutamine synthetase
RA	5,755,012	C→T	8.0%	Y334Y (TAC→TAT)	glnA →	glutamine synthetase
RA	5,755,021	C→T	5.8%	R337R (CGC→CGT)	glnA →	glutamine synthetase
RA	5,755,033	C→T	5.2%	A341A (GCC→GCT)	glnA →	glutamine synthetase
RA	5,755,463	T→G	5.1%	intergenic (+46/‑320)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,758,679	C→G	7.2%	intergenic (+378/‑310)	glnG → / → PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
RA	5,766,776	C→T	6.5%	A260V (GCC→GTC)	ctpA →	carboxy‑terminal‑processing protease
RA	5,766,779	A→G	6.3%	D261G (GAC→GGC)	ctpA →	carboxy‑terminal‑processing protease
RA	5,779,379	G→T	7.9%	intergenic (+20/+23)	betA‑II → / ← PP_5065	choline dehydrogenase/hypothetical protein
RA	5,779,380	C→G	7.9%	intergenic (+21/+22)	betA‑II → / ← PP_5065	choline dehydrogenase/hypothetical protein
RA	5,779,381	A→C	7.7%	intergenic (+22/+21)	betA‑II → / ← PP_5065	choline dehydrogenase/hypothetical protein
RA	5,792,121	A→T	8.9%	intergenic (+22/+46)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,128	A→G	7.8%	intergenic (+29/+39)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,129	C→G	7.5%	intergenic (+30/+38)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,130	C→T	7.8%	intergenic (+31/+37)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,137	A→T	8.4%	intergenic (+38/+30)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,744	C→A	5.6%	G318C (GGC→TGC)	hemE ←	uroporphyrinogen decarboxylase
RA	5,797,033	T→C	5.6%	N949D (AAC→GAC)	gltB ←	L‑glutamate synthase subunit alpha
RA	5,817,509	C→T	7.6%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,817,514	G→T	7.4%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,817,517	A→C	6.5%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,817,522	A→G	6.9%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,826,690	T→G	5.4%	intergenic (+136/+38)	PP_5102 → / ← trmB	hypothetical protein/tRNA (guanosine(46)‑N7)‑methyltransferase TrmB
RA	5,826,691	T→A	5.0%	intergenic (+137/+37)	PP_5102 → / ← trmB	hypothetical protein/tRNA (guanosine(46)‑N7)‑methyltransferase TrmB
RA	5,837,849	Δ1 bp	5.6%	intergenic (+56/‑35)	PP_5114 → / → PP_5115	adenine methyltransferase/zinc protease
RA	5,837,854	A→T	5.2%	intergenic (+61/‑30)	PP_5114 → / → PP_5115	adenine methyltransferase/zinc protease
RA	5,846,752	G→C	5.4%	V466L (GTG→CTG) ‡	PP_5122 →	GMC family oxidoreductase
RA	5,846,753	T→A	5.4%	V466E (GTG→GAG) ‡	PP_5122 →	GMC family oxidoreductase
RA	5,846,754	G→C	5.4%	V466V (GTG→GTC) ‡	PP_5122 →	GMC family oxidoreductase
RA	5,847,936	A→G	5.1%	intergenic (+30/+61)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,847,941	G→A	5.7%	intergenic (+35/+56)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,847,950	T→C	6.4%	intergenic (+44/+47)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,847,955	C→T	5.7%	intergenic (+49/+42)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,851,024	C→T	5.5%	intergenic (+21/‑250)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,851,025	C→G	5.1%	intergenic (+22/‑249)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,851,026	A→G	5.2%	intergenic (+23/‑248)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,851,298	T→A	5.7%	S9T (TCC→ACC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,306	A→C	6.4%	Q11H (CAA→CAC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,315	C→T	5.6%	N14N (AAC→AAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,321	C→T	7.3%	A16A (GCC→GCT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,327	C→G	7.5%	A18A (GCC→GCG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,330	T→C	7.5%	R19R (CGT→CGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,332	C→G	7.5%	A20G (GCC→GGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,336	G→A	7.5%	L21L (CTG→CTA)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,351	G→C	9.1%	G26G (GGG→GGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,360	C→T	9.4%	D29D (GAC→GAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,363	A→G	9.6%	E30E (GAA→GAG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,366	C→T	9.6%	D31D (GAC→GAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,369	C→T	9.6%	F32F (TTC→TTT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,370	A→G	9.9%	K33E (AAG→GAG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,371	A→G	9.9%	K33R (AAG→AGG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,372	G→C	9.9%	K33N (AAG→AAC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,375	A→G	9.9%	K34K (AAA→AAG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,378	G→A	10.0%	P35P (CCG→CCA)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,381	C→T	11.4%	I36I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,384	C→T	11.4%	I37I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,387	C→T	11.0%	A38A (GCC→GCT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,388	A→G	11.0%	I39V (ATC→GTC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,390	C→G	11.0%	I39M (ATC→ATG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,392	C→T	11.0%	A40V (GCC→GTC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,393	C→G	11.0%	A40A (GCC→GCG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,414	A→G	12.4%	V47V (GTA→GTG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,429	C→T	10.4%	H52H (CAC→CAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,441	G→C	11.1%	L56L (CTG→CTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,450	G→C	10.9%	L59L (CTG→CTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,453	G→C	11.3%	V60V (GTG→GTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,456	T→G	9.8%	A61A (GCT→GCG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,465	C→T	9.1%	I64I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,469	C→G	9.1%	R66G (CGC→GGC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,470	G→C	9.1%	R66P (CGC→CCC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,471	C→A	9.0%	R66R (CGC→CGA) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,474	C→T	9.2%	A67A (GCC→GCT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,477	T→C	9.7%	G68G (GGT→GGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,483	G→T	9.6%	V70V (GTG→GTT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,504	C→T	7.8%	I77I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,519	C→T	8.3%	G82G (GGC→GGT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,525	C→G	9.7%	A84A (GCC→GCG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,534	C→T	10.7%	H87H (CAC→CAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,546	G→C	11.5%	L91L (CTG→CTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,549	C→T	11.5%	Y92Y (TAC→TAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,559	A→T	11.4%	S96C (AGC→TGC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,560	G→C	10.8%	S96T (AGC→ACC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,561	C→G	10.8%	S96R (AGC→AGG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,567	A→G	11.1%	E98E (GAA→GAG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,568	A→C	11.6%	I99L (ATC→CTC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,570	C→G	11.1%	I99M (ATC→ATG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,574	G→T	12.6%	A101S (GCC→TCC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,580	G→T	11.2%	A103S (GCC→TCC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,582	C→G	11.1%	A103A (GCC→GCG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,585	G→T	11.6%	V104V (GTG→GTT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,591	C→T	12.2%	Y106Y (TAC→TAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,603	G→C	12.3%	A110A (GCG→GCC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,606	C→T	12.4%	H111H (CAC→CAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,618	C→G	12.2%	A115A (GCC→GCG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,621	C→G	12.1%	I116M (ATC→ATG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,627	T→C	12.4%	C118C (TGT→TGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,630	C→T	12.6%	I119I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,651	C→T	12.6%	T126T (ACC→ACT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,669	C→A	9.1%	A132A (GCC→GCA)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,672	C→A	9.2%	A133A (GCC→GCA)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,675	G→C	8.9%	L134L (CTG→CTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,681	G→C	7.7%	L136L (CTG→CTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,684	C→T	7.6%	N137N (AAC→AAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,853,149	T→A	6.0%	intergenic (+34/+34)	ilvD → / ← PP_5129	dihydroxy‑acid dehydratase/hypothetical protein
RA	5,860,828	A→T	6.2%	intergenic (+28/+110)	PP_5134 → / ← PP_5135	hypothetical protein/ABC transporter substrate‑binding protein
RA	5,869,716	Δ1 bp	5.0%	intergenic (‑33/+19)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,876,797	G→T	5.4%	S451* (TCG→TAG)	ilvA‑II ←	threonine deaminase
RA	5,899,748	A→G	13.1%	intergenic (‑170/+64)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,751	G→A	12.1%	intergenic (‑173/+61)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,756	C→G	12.5%	intergenic (‑178/+56)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,757	G→C	11.6%	intergenic (‑179/+55)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,760	G→C	14.9%	intergenic (‑182/+52)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,761	C→G	12.4%	intergenic (‑183/+51)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,766	T→C	12.7%	intergenic (‑188/+46)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,769	C→T	11.9%	intergenic (‑191/+43)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,905,142	G→T	6.3%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,905,143	A→C	10.3%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,937,534	T→C	6.9%	S193P (TCG→CCG) ‡	fau →	5‑formyltetrahydrofolate cyclo‑ligase
RA	5,937,535	C→G	7.4%	S193W (TCG→TGG) ‡	fau →	5‑formyltetrahydrofolate cyclo‑ligase
RA	5,937,536	G→A	6.8%	S193S (TCG→TCA) ‡	fau →	5‑formyltetrahydrofolate cyclo‑ligase
RA	5,949,076	T→C	5.0%	intergenic (‑90/+116)	ubiD ← / ← rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
RA	5,950,660	T→A	6.1%	intergenic (‑63/+19)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,950,661	T→A	6.1%	intergenic (‑64/+18)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,965,824	T→G	6.4%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,965,829	C→A	5.9%	I217I (ATC→ATA)	PP_5229 →	hypothetical protein
RA	5,971,708	G→A	5.2%	L522L (CTG→TTG)	PP_5236 ←	hypothetical protein
RA	5,971,711	T→A	5.2%	N521Y (AAC→TAC)	PP_5236 ←	hypothetical protein
RA	5,971,712	G→C	5.2%	Y520* (TAC→TAG) ‡	PP_5236 ←	hypothetical protein
RA	5,971,713	T→A	5.2%	Y520F (TAC→TTC) ‡	PP_5236 ←	hypothetical protein
RA	5,971,716	T→C	5.2%	K519R (AAG→AGG)	PP_5236 ←	hypothetical protein
RA	5,986,414	T→C	24.3%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,420	G→A	25.8%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,422	T→C	25.1%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,425	G→A	24.4%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,427	T→C	25.2%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,433	G→A	24.4%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,813	T→C	5.5%	E95E (GAA→GAG)	ycaC‑II ←	putative hydrolase
RA	5,986,816	G→A	5.6%	N94N (AAC→AAT)	ycaC‑II ←	putative hydrolase
RA	5,986,843	A→G	5.9%	R85R (CGT→CGC)	ycaC‑II ←	putative hydrolase
RA	5,986,846	G→A	6.1%	A84A (GCC→GCT)	ycaC‑II ←	putative hydrolase
RA	5,986,849	A→G	6.3%	I83I (ATT→ATC)	ycaC‑II ←	putative hydrolase
RA	5,986,852	G→A	6.2%	Y82Y (TAC→TAT)	ycaC‑II ←	putative hydrolase
RA	5,986,855	C→A	6.8%	P81P (CCG→CCT)	ycaC‑II ←	putative hydrolase
RA	5,986,870	C→T	6.3%	M76I (ATG→ATA) ‡	ycaC‑II ←	putative hydrolase
RA	5,986,871	A→G	6.2%	M76T (ATG→ACG) ‡	ycaC‑II ←	putative hydrolase
RA	5,986,873	C→T	6.3%	E75E (GAG→GAA)	ycaC‑II ←	putative hydrolase
RA	5,986,885	G→C	6.1%	P71P (CCC→CCG)	ycaC‑II ←	putative hydrolase
RA	5,986,893	G→A	6.0%	L69L (CTG→TTG)	ycaC‑II ←	putative hydrolase
RA	5,986,894	C→T	6.4%	P68P (CCG→CCA)	ycaC‑II ←	putative hydrolase
RA	5,986,909	T→G	6.2%	Q63H (CAA→CAC) ‡	ycaC‑II ←	putative hydrolase
RA	5,986,911	G→T	6.4%	Q63K (CAA→AAA) ‡	ycaC‑II ←	putative hydrolase
RA	5,986,912	C→T	6.1%	E62E (GAG→GAA)	ycaC‑II ←	putative hydrolase
RA	5,986,915	G→A	6.0%	F61F (TTC→TTT)	ycaC‑II ←	putative hydrolase
RA	5,986,918	G→A	5.9%	S60S (AGC→AGT)	ycaC‑II ←	putative hydrolase
RA	5,990,787	G→A	26.7%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,797	T→C	24.5%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,802	C→T	22.4%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,803	G→T	22.6%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,804	C→T	22.7%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,807	A→G	22.6%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,813	G→C	24.6%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,815	C→G	25.6%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,818	C→T	24.2%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,822	C→G	26.8%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,826	C→T	26.9%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,828	C→T	26.1%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,867	C→A	29.6%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,872	C→T	33.2%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,873	A→G	33.3%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,883	T→C	38.8%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,889	Δ1 bp	39.1%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,992,312	A→G	8.6%	I111I (ATT→ATC)	ycaC‑III ←	putative hydrolase
RA	5,992,317	T→G	9.3%	I110L (ATC→CTC)	ycaC‑III ←	putative hydrolase
RA	5,992,320	G→A	9.8%	L109L (CTG→TTG)	ycaC‑III ←	putative hydrolase
RA	5,992,336	C→G	12.9%	A103A (GCG→GCC)	ycaC‑III ←	putative hydrolase
RA	5,992,345	C→T	11.7%	A100A (GCG→GCA)	ycaC‑III ←	putative hydrolase
RA	5,992,357	A→T	12.0%	D96E (GAT→GAA)	ycaC‑III ←	putative hydrolase
RA	5,992,363	G→A	12.3%	N94N (AAC→AAT)	ycaC‑III ←	putative hydrolase
RA	5,992,387	A→G	11.5%	P86P (CCT→CCC)	ycaC‑III ←	putative hydrolase
RA	5,992,393	G→A	11.6%	A84A (GCC→GCT)	ycaC‑III ←	putative hydrolase
RA	5,992,396	A→G	11.7%	I83I (ATT→ATC)	ycaC‑III ←	putative hydrolase
RA	5,992,399	G→A	11.9%	Y82Y (TAC→TAT)	ycaC‑III ←	putative hydrolase
RA	5,992,402	C→A	11.5%	P81P (CCG→CCT)	ycaC‑III ←	putative hydrolase
RA	5,992,417	C→T	8.5%	L76L (CTG→CTA) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,418	A→G	8.6%	L76P (CTG→CCG) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,419	G→T	8.5%	L76M (CTG→ATG) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,420	G→T	8.5%	A75A (GCC→GCA) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,421	G→T	8.5%	A75D (GCC→GAC) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,429	T→C	8.0%	E72E (GAA→GAG)	ycaC‑III ←	putative hydrolase
RA	5,992,440	G→A	7.8%	L69L (CTG→TTG)	ycaC‑III ←	putative hydrolase
RA	5,992,441	C→T	7.4%	P68P (CCG→CCA)	ycaC‑III ←	putative hydrolase
RA	5,992,447	G→A	8.0%	N66N (AAC→AAT)	ycaC‑III ←	putative hydrolase
RA	5,992,450	G→C	5.7%	P65P (CCC→CCG)	ycaC‑III ←	putative hydrolase
RA	5,999,167:1	+G	15.1%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,999,172	Δ1 bp	16.1%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,005,513	A→C	5.7%	R134R (CGT→CGG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,514	C→A	5.5%	R134L (CGT→CTT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,515	G→T	5.5%	R134S (CGT→AGT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,519	G→A	5.7%	H132H (CAC→CAT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,520	T→C	5.7%	H132R (CAC→CGC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,522	G→A	5.6%	H131H (CAC→CAT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,528	C→A	6.0%	P129P (CCG→CCT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,530	G→C	6.3%	P129A (CCG→GCG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,534	C→T	6.0%	E127E (GAG→GAA)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,539	A→T	8.1%	S126T (TCC→ACC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,546	G→T	8.4%	T123T (ACC→ACA)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,549	C→G	8.4%	L122L (CTG→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,558	C→A	10.0%	L119L (CTG→CTT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,564	G→A	9.7%	R117R (CGC→CGT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,573	G→A	10.1%	G114G (GGC→GGT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,579	G→T	11.5%	A112A (GCC→GCA)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,585	G→A	14.5%	D110D (GAC→GAT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,609	C→T	13.2%	V102V (GTG→GTA)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,615	A→G	12.2%	G100G (GGT→GGC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,618	C→G	12.3%	L99L (CTG→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,628	T→G	10.5%	Q96P (CAG→CCG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,629	G→A	10.7%	Q96* (CAG→TAG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,630	G→A	10.7%	T95T (ACC→ACT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,633	G→A	10.7%	I94I (ATC→ATT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,642	G→A	11.5%	A91A (GCC→GCT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,650	T→G	10.0%	I89L (ATC→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,654	G→A	9.7%	V87V (GTC→GTT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,657	C→G	9.5%	L86L (CTG→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,660	C→A	9.3%	E85D (GAG→GAT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,661	T→C	9.3%	E85G (GAG→GGG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,662	C→G	9.2%	E85Q (GAG→CAG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,672	G→T	8.6%	A81A (GCC→GCA) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,673	G→T	8.4%	A81D (GCC→GAC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,679	T→G	6.6%	H79P (CAC→CCC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,680	G→A	6.6%	H79Y (CAC→TAC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,681	C→A	6.3%	E78D (GAG→GAT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,682	T→G	6.6%	E78A (GAG→GCG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,690	C→T	6.5%	V75V (GTG→GTA) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,691	A→T	6.4%	V75E (GTG→GAG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,696	G→A	6.7%	G73G (GGC→GGT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,701	A→G	6.0%	F72L (TTC→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,708	C→G	5.4%	V69V (GTG→GTC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,710	C→T	5.5%	V69M (GTG→ATG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,006,965	T→G	8.7%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,972	G→C	16.8%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,975	A→T	17.2%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,978	G→C	18.8%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,985	C→A	10.8%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,015,814	G→A	21.6%	intergenic (+41/+69)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,816	A→G	21.6%	intergenic (+43/+67)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,823	G→C	20.6%	intergenic (+50/+60)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,824	T→G	22.4%	intergenic (+51/+59)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,825	C→T	21.4%	intergenic (+52/+58)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,830	A→G	19.6%	intergenic (+57/+53)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,831	C→A	19.1%	intergenic (+58/+52)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,832	G→C	22.2%	intergenic (+59/+51)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,839	C→T	20.2%	intergenic (+66/+44)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,841	T→C	21.0%	intergenic (+68/+42)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,021,253	G→C	6.3%	intergenic (‑76/+69)	dadX ← / ← dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
RA	6,021,257	A→C	5.8%	intergenic (‑80/+65)	dadX ← / ← dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
RA	6,023,679	C→A	5.5%	intergenic (‑52/‑92)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,025,137	G→A	5.8%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,025,138	T→C	5.9%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,029,201	A→T	5.1%	F212I (TTC→ATC)	PP_5277 ←	MFS transporter
RA	6,034,763	C→T	13.4%	intergenic (+49/+87)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,042,772	T→A	5.6%	intergenic (+19/+15)	PP_5292 → / ← PP_5293	catabolite repression control protein/hypothetical protein
RA	6,044,315	G→C	5.1%	E92Q (GAA→CAA) ‡	PP_5295 →	hypothetical protein
RA	6,044,317	A→T	5.1%	E92D (GAA→GAT) ‡	PP_5295 →	hypothetical protein
RA	6,044,319	G→C	5.1%	C93S (TGC→TCC)	PP_5295 →	hypothetical protein
RA	6,046,218	A→G	5.2%	S350S (AGT→AGC)	PP_5297 ←	amino acid transporter
RA	6,061,371	A→T	5.5%	K145* (AAG→TAG) ‡	PP_5311 →	signal transduction protein
RA	6,061,372	A→T	5.6%	K145M (AAG→ATG) ‡	PP_5311 →	signal transduction protein
RA	6,062,481	C→A	7.0%	intergenic (+139/+42)	PP_5311 → / ← PP_5312	signal transduction protein/hypothetical protein
RA	6,079,498	T→G	5.2%	E60A (GAG→GCG) ‡	PP_5329 ←	phosphate ABC transporter substrate‑binding protein
RA	6,079,499	C→A	5.2%	E60* (GAG→TAG) ‡	PP_5329 ←	phosphate ABC transporter substrate‑binding protein
RA	6,079,851	A→C	11.2%	intergenic (‑175/+63)	PP_5329 ← / ← PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
RA	6,082,123	A→T	5.6%	Q30L (CAG→CTG)	PP_5332 →	hypothetical protein
RA	6,082,126	A→T	5.6%	Q31L (CAG→CTG)	PP_5332 →	hypothetical protein
RA	6,082,966	T→A	12.5%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,082,967	T→A	12.2%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,105,185	G→A	5.7%	G14S (GGC→AGC) ‡	PP_5353 →	hypothetical protein
RA	6,105,187	C→G	5.7%	G14G (GGC→GGG) ‡	PP_5353 →	hypothetical protein
RA	6,105,189	T→C	5.6%	L15P (CTG→CCG)	PP_5353 →	hypothetical protein
RA	6,113,166	G→C	5.6%	P108A (CCA→GCA)	PP_5361 ←	protein P47K
RA	6,123,345	C→T	5.5%	A261A (GCG→GCA)	PP_5371 ←	rubredoxin/rubredoxin reductase
RA	6,123,349	T→C	5.3%	E260G (GAG→GGG) ‡	PP_5371 ←	rubredoxin/rubredoxin reductase
RA	6,123,350	C→G	5.2%	E260Q (GAG→CAG) ‡	PP_5371 ←	rubredoxin/rubredoxin reductase
RA	6,123,351	G→A	5.4%	P259P (CCC→CCT)	PP_5371 ←	rubredoxin/rubredoxin reductase
RA	6,123,355	A→G	5.5%	L258P (CTG→CCG)	PP_5371 ←	rubredoxin/rubredoxin reductase
RA	6,129,594	T→C	5.3%	Q90R (CAG→CGG)	PP_5375 ←	LysR family transcriptional regulator
RA	6,129,608	G→A	5.5%	T85T (ACC→ACT)	PP_5375 ←	LysR family transcriptional regulator
RA	6,131,148	C→T	6.1%	intergenic (+32/+35)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,131,151	A→T	6.3%	intergenic (+35/+32)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,131,154	A→G	6.2%	intergenic (+38/+29)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,134,579	T→C	5.0%	T418A (ACC→GCC)	copA‑II ←	copper resistance protein A
RA	6,135,063	G→A	5.4%	D256D (GAC→GAT)	copA‑II ←	copper resistance protein A
RA	6,160,959	C→T	6.6%	intergenic (+318/+550)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,961	C→G	6.6%	intergenic (+320/+548)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,962	T→A	6.6%	intergenic (+321/+547)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,963	C→G	6.4%	intergenic (+322/+546)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,965	A→G	6.5%	intergenic (+324/+544)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,168,448	G→T	6.7%	intergenic (‑229/‑451)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,168,449	T→G	7.1%	intergenic (‑230/‑450)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,168,452	C→A	7.1%	intergenic (‑233/‑447)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,168,453	A→C	7.1%	intergenic (‑234/‑446)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,168,462	T→C	5.9%	intergenic (‑243/‑437)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,176,686	G→T	6.1%	intergenic (‑70/+49)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon
RA	6,176,687	A→C	6.0%	intergenic (‑71/+48)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	6183852	6183858	7	172 [0]	[0] NA	atpI/–	ATP synthase protein I/–

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1 =	0 (0.000)	154 (1.010)	88/276	NT	100%	intergenic (–/+146)	–/parB	–/chromosome‑partitioning protein
	?	NC_002947	= 6183851	0 (0.000)					intergenic (‑3/–)	atpI/–	ATP synthase protein I/–
*	?	NC_002947	= 81061	162 (1.060)	12 (0.080)	3/256	NT	9.8%	intergenic (+118/‑16)	tsaC/PP_5425	threonylcarbamoyl‑AMP synthase/hypothetical protein
	?	NC_002947	= 2238889	71 (0.500)					intergenic (+19/+109)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
*	?	NC_002947	86750 =	71 (0.470)	13 (0.100)	9/244	NT	16.5%	intergenic (‑33/+112)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	86841 =	69 (0.510)					intergenic (‑124/+21)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	= 86765	73 (0.480)	12 (0.090)	5/244	NT	15.2%	intergenic (‑48/+97)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	= 86824	69 (0.510)					intergenic (‑107/+38)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	= 90374	110 (0.720)	18 (0.130)	11/244	NT	14.3%	intergenic (+49/+73)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
	?	NC_002947	= 90397	118 (0.880)					intergenic (+72/+50)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
*	?	NC_002947	100443 =	115 (0.750)	7 (0.050)	5/242	NT	6.2%	intergenic (‑35/+87)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
	?	NC_002947	100525 =	112 (0.840)					intergenic (‑117/+5)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
*	?	NC_002947	= 100459	109 (0.720)	9 (0.070)	9/242	NT	8.0%	intergenic (‑51/+71)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
	?	NC_002947	= 100507	112 (0.840)					intergenic (‑99/+23)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
*	?	NC_002947	= 171806	NA (NA)	107 (0.880) +28 bp	42/220	NT	NA	noncoding (418/1522 nt)	PP_16SA	16S ribosomal RNA
	?	NC_002947	171860 =	NA (NA)					noncoding (472/1522 nt)	PP_16SA	16S ribosomal RNA
*	?	NC_002947	= 174906	NA (NA)	13 (0.090)	9/266	NT	NA	noncoding (1704/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	= 174936	NA (NA)					noncoding (1734/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	= 176399	NA (NA)	56 (0.380) +CGAAA	18/266	NT	38.5%	intergenic (+43/‑420)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 182013	93 (0.610)					intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
*	?	NC_002947	= 181529	NA (NA)	13 (0.090)	4/268	NT	9.2%	noncoding (2897/2902 nt)	PP_23SB	23S ribosomal RNA
	?	NC_002947	= 702785	132 (0.870)					intergenic (+30/‑102)	PP_23SD/PP_5SD	23S ribosomal RNA/5S ribosomal RNA
*	?	NC_002947	= 181533	0 (0.000)	21 (0.140)	9/268	NT	100%	noncoding (2901/2902 nt)	PP_23SB	23S ribosomal RNA
	?	NC_002947	= 529693	NA (NA)					intergenic (+26/‑94)	PP_23SC/PP_5SC	23S ribosomal RNA/5S ribosomal RNA
*	?	NC_002947	209595 =	NA (NA)	6 (0.040)	6/266	NT	100%	coding (15101/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	209619 =	0 (0.000)					coding (15125/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	235331 =	106 (0.700)	13 (0.100)	13/244	NT	13.2%	intergenic (+28/+97)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	235390 =	77 (0.570)					intergenic (+87/+38)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	278734 =	107 (0.700)	7 (0.060)	6/228	NT	8.6%	intergenic (‑229/+86)	PP_0224/sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
	?	NC_002947	278805 =	60 (0.480)					intergenic (‑300/+15)	PP_0224/sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
*	?	NC_002947	295695 =	74 (0.490)	19 (0.130)	10/268	NT	17.6%	intergenic (+42/+100)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	295764 =	106 (0.720)					intergenic (+111/+31)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	= 295713	83 (0.540)	18 (0.130)	10/248	NT	17.3%	intergenic (+60/+82)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	= 295744	97 (0.710)					intergenic (+91/+51)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	312718 =	78 (0.510)	7 (0.050)	6/248	NT	8.8%	coding (496/831 nt)	fdhD	protein sulfur transferase
	?	NC_002947	312774 =	75 (0.550)					coding (440/831 nt)	fdhD	protein sulfur transferase
*	?	NC_002947	= 312731	76 (0.500)	12 (0.090)	4/248	NT	14.4%	coding (483/831 nt)	fdhD	protein sulfur transferase
	?	NC_002947	= 312759	75 (0.550)					coding (455/831 nt)	fdhD	protein sulfur transferase
*	?	NC_002947	= 336235	41 (0.270)	8 (0.070)	6/222	NT	16.5%	intergenic (+80/+313)	PP_0278/PP_0279	hypothetical protein/hypothetical protein
	?	NC_002947	= 336301	48 (0.390)					intergenic (+146/+247)	PP_0278/PP_0279	hypothetical protein/hypothetical protein
*	?	NC_002947	359677 =	155 (1.020)	17 (0.120)	13/262	NT	11.6%	intergenic (+34/+86)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
	?	NC_002947	359721 =	112 (0.770)					intergenic (+78/+42)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 380858	47 (0.310)	15 (0.120)	9/230	NT	24.6%	intergenic (+45/+64)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	= 380892	53 (0.420)					intergenic (+79/+30)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 401304	NA (NA)	5 (0.030)	4/262	NT	5.2%	coding (887/1059 nt)	PP_0334	transposase
	?	NC_002947	401367 =	96 (0.630)					coding (950/1059 nt)	PP_0334	transposase
*	?	NC_002947	427923 =	159 (1.040)	10 (0.070)	4/258	NT	7.0%	intergenic (‑122/+130)	PP_0350/PP_0351	ferrichrome‑iron receptor/transmembrane sensor
	?	NC_002947	427998 =	117 (0.820)					intergenic (‑197/+55)	PP_0350/PP_0351	ferrichrome‑iron receptor/transmembrane sensor
*	?	NC_002947	436353 =	125 (0.820)	8 (0.060)	6/258	NT	6.9%	intergenic (+183/+50)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
	?	NC_002947	436386 =	99 (0.700)					intergenic (+216/+17)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
*	?	NC_002947	478264 =	85 (0.560)	15 (0.130)	10/216	NT	22.7%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	36 (0.300)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	507013 =	138 (0.910)	10 (0.070)	6/248	NT	7.4%	intergenic (+22/+111)	trpE/estP	anthranilate synthase component 1/esterase EstP
	?	NC_002947	507103 =	126 (0.920)					intergenic (+112/+21)	trpE/estP	anthranilate synthase component 1/esterase EstP
*	?	NC_002947	= 588327	220 (1.440)	15 (0.100)	8/262	NT	6.7%	coding (322/876 nt)	PP_0498	hypothetical protein
	?	NC_002947	= 588352	206 (1.420)					coding (297/876 nt)	PP_0498	hypothetical protein
*	?	NC_002947	594786 =	112 (0.740)	8 (0.060)	5/246	NT	8.0%	intergenic (‑22/+105)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
	?	NC_002947	594847 =	85 (0.630)					intergenic (‑83/+44)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
*	?	NC_002947	= 699806	0 (0.000)	5 (0.030)	4/264	NT	17.2%	intergenic (+196/‑48)	PP_t06/PP_23SD	tRNA‑Ala/23S ribosomal RNA
	?	NC_002947	5312649 =	48 (0.330)					intergenic (‑90/+145)	PP_23SG/PP_t51	23S ribosomal RNA/tRNA‑Ala
*	?	NC_002947	706865 =	156 (1.020)	7 (0.050)	4/244	NT	6.0%	intergenic (+38/+208)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
	?	NC_002947	706982 =	81 (0.600)					intergenic (+155/+91)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
*	?	NC_002947	726914 =	102 (0.670)	6 (0.040)	4/256	NT	5.9%	intergenic (‑158/+109)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	726971 =	98 (0.690)					intergenic (‑215/+52)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 741872	NA (NA)	5 (0.030)	3/264	NT	NA	intergenic (+469/‑31)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741905	NA (NA)					coding (3/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	745619 =	NA (NA)	4 (0.030)	4/266	NT	NA	coding (883/1533 nt)	PP_0637	transposase
	?	NC_002947	745655 =	NA (NA)					coding (847/1533 nt)	PP_0637	transposase
*	?	NC_002947	= 786605	134 (0.880)	7 (0.050)	6/254	NT	5.2%	intergenic (+24/‑281)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
	?	NC_002947	= 786691	134 (0.960)					intergenic (+110/‑195)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
*	?	NC_002947	796828 =	85 (0.560)	8 (0.060)	6/244	NT	9.4%	intergenic (+27/‑163)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
	?	NC_002947	796898 =	80 (0.590)					intergenic (+97/‑93)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
*	?	NC_002947	= 796843	85 (0.560)	10 (0.070)	6/244	NT	11.4%	intergenic (+42/‑148)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
	?	NC_002947	= 796881	80 (0.590)					intergenic (+80/‑110)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
*	?	NC_002947	850908 =	132 (0.870)	11 (0.080)	8/240	NT	9.4%	intergenic (‑488/‑317)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
	?	NC_002947	851046 =	98 (0.740)					intergenic (‑626/‑179)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
*	?	NC_002947	867923 =	48 (0.320)	23 (0.170)	8/250	NT	26.5%	intergenic (+18/+159)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	868013 =	84 (0.610)					intergenic (+108/+69)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	= 867952	64 (0.420)	12 (0.090)	8/246	NT	16.0%	intergenic (+47/+130)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	= 867982	69 (0.510)					intergenic (+77/+100)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	915056 =	134 (0.880)	6 (0.050)	4/230	NT	5.9%	intergenic (+21/+127)	fruA/PP_0796	PTS fructose transporter subunit IIBC/hypothetical protein
	?	NC_002947	915159 =	81 (0.640)					intergenic (+124/+24)	fruA/PP_0796	PTS fructose transporter subunit IIBC/hypothetical protein
*	?	NC_002947	967853 =	119 (0.780)	17 (0.130)	11/246	NT	13.0%	intergenic (‑29/+139)	PP_0830/PP_0831	acetyltransferase/hypothetical protein
	?	NC_002947	967944 =	122 (0.900)					intergenic (‑120/+48)	PP_0830/PP_0831	acetyltransferase/hypothetical protein
*	?	NC_002947	= 989426	164 (1.080)	9 (0.060)	6/262	NT	5.3%	coding (1275/1290 nt)	hisS	histidine‑‑tRNA ligase
	?	NC_002947	= 989441	168 (1.160)					coding (1290/1290 nt)	hisS	histidine‑‑tRNA ligase
*	?	NC_002947	1025270 =	52 (0.340)	10 (0.080)	7/222	NT	18.6%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1025363 =	46 (0.380)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 1025296	53 (0.350)	8 (0.070)	6/222	NT	15.3%	intergenic (‑147/+82)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	= 1025335	46 (0.380)					intergenic (‑186/+43)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	1037774 =	72 (0.470)	8 (0.060)	7/230	NT	12.1%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	56 (0.440)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1037796	62 (0.410)	5 (0.040)	5/230	NT	8.5%	intergenic (+38/+78)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	= 1037828	56 (0.440)					intergenic (+70/+46)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	1114875 =	97 (0.640)	14 (0.110)	9/226	NT	17.8%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114951 =	50 (0.400)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1138537 =	116 (0.760)	13 (0.100)	12/248	NT	10.7%	intergenic (‑62/+103)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
	?	NC_002947	1138626 =	113 (0.830)					intergenic (‑151/+14)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
*	?	NC_002947	1149908 =	113 (0.740)	14 (0.090)	8/268	NT	11.5%	intergenic (‑149/+108)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	1150021 =	105 (0.710)					coding (997/1002 nt)	gapA	glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	= 1149945	107 (0.700)	8 (0.060)	3/260	NT	6.0%	intergenic (‑186/+71)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	6054458 =	150 (1.050)					intergenic (+41/+129)	PP_5304/PP_5305	lipoprotein/epimerase/dehydratase‑like protein
*	?	NC_002947	= 1168587	107 (0.700)	10 (0.080)	6/240	NT	9.4%	intergenic (+98/+155)	eda/leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
	?	NC_002947	= 1168660	99 (0.750)					intergenic (+171/+82)	eda/leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
*	?	NC_002947	1170750 =	110 (0.720)	10 (0.070)	5/254	NT	9.0%	intergenic (‑335/+98)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
	?	NC_002947	1170834 =	102 (0.730)					intergenic (‑419/+14)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
*	?	NC_002947	= 1246689	79 (0.520)	11 (0.090)	6/228	NT	13.2%	intergenic (+84/‑287)	PP_1087/argG	OmpA family outer membrane protein/argininosuccinate synthase
	?	NC_002947	= 1246762	79 (0.630)					intergenic (+157/‑214)	PP_1087/argG	OmpA family outer membrane protein/argininosuccinate synthase
*	?	NC_002947	= 1296796	NA (NA)	4 (0.030)	3/262	NT	NA	intergenic (‑543/‑23)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	= 1296820	NA (NA)					coding (2/1329 nt)	PP_1133	transposase
*	?	NC_002947	1298272 =	NA (NA)	23 (0.160)	16/268	NT	NA	intergenic (+125/+304)	PP_1133/PP_1134	transposase/hypothetical protein
	?	NC_002947	1298318 =	NA (NA)					intergenic (+171/+258)	PP_1133/PP_1134	transposase/hypothetical protein
*	?	NC_002947	= 1311725	77 (0.510)	9 (0.070)	7/250	NT	10.0%	intergenic (‑187/+91)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	= 1311784	93 (0.670)					intergenic (‑246/+32)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
*	?	NC_002947	1362765 =	163 (1.070)	10 (0.070)	8/272	NT	5.9%	coding (1149/1347 nt)	phoQ	sensor protein
	?	NC_002947	1362794 =	159 (1.060)					coding (1178/1347 nt)	phoQ	sensor protein
*	?	NC_002947	= 1380504	119 (0.780)	7 (0.050)	6/252	NT	6.0%	intergenic (‑224/+38)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
	?	NC_002947	= 1380519	112 (0.810)					intergenic (‑239/+23)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
*	?	NC_002947	1419553 =	20 (0.130)	15 (0.130)	7/212	NT	43.9%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	23 (0.200)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	16 (0.110)	15 (0.130)	11/212	NT	46.0%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	23 (0.200)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1426821	NA (NA)	18 (0.120)	9/266	NT	NA	coding (712/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1426852	NA (NA)					coding (743/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	1487013 =	44 (0.290)	18 (0.150)	7/216	NT	37.4%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	26 (0.220)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1487042	39 (0.260)	12 (0.100)	8/216	NT	29.8%	intergenic (+51/+79)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	= 1487072	26 (0.220)					intergenic (+81/+49)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1499465	48 (0.320)	11 (0.090)	7/230	NT	20.6%	intergenic (+35/‑131)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499502	45 (0.350)					intergenic (+72/‑94)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1531788 =	58 (0.380)	10 (0.080)	4/228	NT	19.6%	coding (130/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	1531884 =	34 (0.270)					coding (34/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	= 1531824	47 (0.310)	10 (0.070)	6/252	NT	22.0%	coding (94/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	= 1531846	28 (0.200)					coding (72/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	= 1617818	55 (0.360)	8 (0.060)	6/238	NT	14.2%	intergenic (‑31/+142)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC
	?	NC_002947	= 1617919	49 (0.370)					intergenic (‑132/+41)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC
*	?	NC_002947	= 1701506	115 (0.750)	8 (0.060)	5/262	NT	6.3%	coding (932/1023 nt)	prfB	peptide chain release factor 2
	?	NC_002947	= 1701538	127 (0.880)					coding (964/1023 nt)	prfB	peptide chain release factor 2
*	?	NC_002947	= 1727790	174 (1.140)	10 (0.070)	6/266	NT	5.5%	coding (416/2487 nt)	plsB	glycerol‑3‑phosphate acyltransferase
	?	NC_002947	= 1727812	173 (1.180)					coding (394/2487 nt)	plsB	glycerol‑3‑phosphate acyltransferase
*	?	NC_002947	1731205 =	33 (0.220)	12 (0.100)	5/220	NT	28.5%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	34 (0.280)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1731232	31 (0.200)	9 (0.070)	7/220	NT	23.5%	intergenic (‑103/+88)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1731268	34 (0.280)					intergenic (‑139/+52)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1734865	81 (0.530)	20 (0.140)	12/254	NT	19.1%	intergenic (+25/+88)	tcdA/PP_1528	tRNA cyclic N6‑threonylcarbamoyladenosine(37) synthase TcdA/hypothetical protein
	?	NC_002947	= 1734927	95 (0.680)					intergenic (+87/+26)	tcdA/PP_1528	tRNA cyclic N6‑threonylcarbamoyladenosine(37) synthase TcdA/hypothetical protein
*	?	NC_002947	1748731 =	141 (0.930)	11 (0.080)	9/264	NT	7.5%	intergenic (‑22/‑310)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
	?	NC_002947	1748774 =	137 (0.940)					intergenic (‑65/‑267)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1799915	90 (0.590)	20 (0.160)	9/230	NT	19.4%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799957	91 (0.720)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	1811457 =	82 (0.540)	6 (0.050)	3/230	NT	8.4%	intergenic (+22/+106)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
	?	NC_002947	1811537 =	63 (0.500)					intergenic (+102/+26)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
*	?	NC_002947	= 1811479	78 (0.510)	7 (0.060)	5/230	NT	9.9%	intergenic (+44/+84)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
	?	NC_002947	= 1811513	63 (0.500)					intergenic (+78/+50)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
*	?	NC_002947	1838113 =	146 (0.960)	12 (0.080)	8/256	NT	8.5%	intergenic (+18/+86)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	1838195 =	123 (0.870)					intergenic (+100/+4)	PP_1642/PP_1643	hypothetical protein/membrane protein
*	?	NC_002947	1899260 =	78 (0.510)	19 (0.140)	6/246	NT	19.8%	intergenic (+288/‑232)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899320 =	84 (0.620)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	= 1899274	82 (0.540)	14 (0.100)	8/246	NT	15.1%	intergenic (+302/‑218)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 1899304	84 (0.620)					intergenic (+332/‑188)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1906724 =	84 (0.550)	10 (0.080)	8/224	NT	14.3%	intergenic (+22/+106)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1906818 =	52 (0.420)					intergenic (+116/+12)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	= 1947843	46 (0.300)	6 (0.050)	3/224	NT	11.4%	intergenic (‑61/+109)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	= 1947910	56 (0.450)					intergenic (‑128/+42)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	1967188 =	8 (0.050)	18 (0.160)	11/210	NT	49.9%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	30 (0.260)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1967220	7 (0.050)	14 (0.120)	8/210	NT	44.2%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	30 (0.260)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	1968074 =	110 (0.720)	14 (0.100)	7/250	NT	11.8%	intergenic (‑42/+116)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
	?	NC_002947	1968159 =	110 (0.800)					intergenic (‑127/+31)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
*	?	NC_002947	1970763 =	92 (0.600)	17 (0.130)	6/236	NT	17.0%	intergenic (+14/‑252)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	1970865 =	87 (0.670)					intergenic (+116/‑150)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	= 1970782	84 (0.550)	15 (0.120)	8/236	NT	15.9%	intergenic (+33/‑233)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	= 1970844	87 (0.670)					intergenic (+95/‑171)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	2050759 =	117 (0.770)	6 (0.040)	5/242	NT	6.3%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2050850 =	75 (0.560)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	2052524 =	40 (0.260)	5 (0.040)	3/202	NT	17.5%	intergenic (‑52/+123)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	2052634 =	18 (0.160)					intergenic (‑162/+13)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2052560	31 (0.200)	22 (0.200)	11/202	NT	52.0%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2052596	18 (0.160)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2057943	87 (0.570)	8 (0.060)	4/244	NT	9.9%	intergenic (+27/‑116)	aroC/PP_1831	chorismate synthase/membrane protein
	?	NC_002947	= 2058017	68 (0.510)					intergenic (+101/‑42)	aroC/PP_1831	chorismate synthase/membrane protein
*	?	NC_002947	2059760 =	49 (0.320)	7 (0.050)	5/268	NT	8.9%	intergenic (+11/+117)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	2059858 =	96 (0.650)					intergenic (+109/+19)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	= 2059788	57 (0.370)	11 (0.090)	5/228	NT	15.6%	intergenic (+39/+89)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2059828	72 (0.570)					intergenic (+79/+49)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	= 2071126	215 (1.410)	12 (0.080)	12/272	NT	5.4%	intergenic (+8/‑466)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
	?	NC_002947	= 2071162	208 (1.390)					intergenic (+44/‑430)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
*	?	NC_002947	2087477 =	83 (0.540)	11 (0.080)	5/260	NT	12.8%	intergenic (+221/‑374)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	2089647 =	72 (0.500)					intergenic (+495/+423)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
*	?	NC_002947	2088208 =	NA (NA)	4 (0.030)	3/260	NT	NA	coding (358/1302 nt)	PP_1865	transposase
	?	NC_002947	2088270 =	NA (NA)					coding (420/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2088215	NA (NA)	12 (0.080)	6/260	NT	NA	coding (365/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2088261	NA (NA)					coding (411/1302 nt)	PP_1865	transposase
*	?	NC_002947	2101925 =	45 (0.300)	13 (0.100)	11/230	NT	27.0%	intergenic (‑71/‑134)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2102020 =	33 (0.260)					intergenic (‑166/‑39)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2101947	42 (0.280)	12 (0.090)	8/230	NT	26.1%	intergenic (‑93/‑112)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2101996	33 (0.260)					intergenic (‑142/‑63)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2179666 =	141 (0.930)	150 (0.990)	81/274	NT	66.4%	intergenic (+102/‑64)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
	?	NC_002947	= 4459541	12 (0.080)					coding (213/696 nt)	pcaI	3‑oxoadipate CoA‑transferase subunit A
*	?	NC_002947	= 2181342	179 (1.170)	167 (1.100)	90/274	NT	63.9%	intergenic (+176/+92)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
	?	NC_002947	4459540 =	11 (0.070)					coding (212/696 nt)	pcaI	3‑oxoadipate CoA‑transferase subunit A
*	?	NC_002947	2238959 =	78 (0.510)	5 (0.040)	4/244	NT	6.3%	intergenic (+89/+39)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
	?	NC_002947	2303474 =	80 (0.590)					intergenic (‑153/‑178)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	= 2247109	138 (0.910)	8 (0.060)	6/258	NT	5.4%	coding (690/972 nt)	dusC	tRNA‑dihydrouridine synthase DusC
	?	NC_002947	= 2247141	150 (1.050)					coding (722/972 nt)	dusC	tRNA‑dihydrouridine synthase DusC
*	?	NC_002947	2247414 =	96 (0.630)	6 (0.040) +GCCTGATCGAGGA	4/250	NT	5.1%	intergenic (+23/‑313)	dusC/ibpA	tRNA‑dihydrouridine synthase DusC/small heat shock protein IbpA
	?	NC_002947	2516343 =	150 (0.980)					intergenic (+38/+181)	PP_2207/phnX	membrane protein/phosphonoacetaldehyde hydrolase
*	?	NC_002947	= 2247436	123 (0.810)	7 (0.060)	5/230	NT	5.6%	intergenic (+45/‑291)	dusC/ibpA	tRNA‑dihydrouridine synthase DusC/small heat shock protein IbpA
	?	NC_002947	= 2247494	133 (1.050)					intergenic (+103/‑233)	dusC/ibpA	tRNA‑dihydrouridine synthase DusC/small heat shock protein IbpA
*	?	NC_002947	2297740 =	84 (0.550)	11 (0.090)	5/228	NT	14.2%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2297825 =	64 (0.510)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2297763	82 (0.540)	15 (0.120)	10/228	NT	18.6%	intergenic (+44/+89)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	= 2297800	64 (0.510)					intergenic (+81/+52)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2297824	72 (0.470)	4 (0.030)	3/248	NT	5.5%	intergenic (+105/+28)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	= 2959037	74 (0.540)					intergenic (+27/‑169)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	2302428 =	124 (0.810)	9 (0.060)	4/262	NT	6.5%	coding (894/1239 nt)	sbcD	exonuclease subunit SbcD
	?	NC_002947	2302470 =	140 (0.970)					coding (852/1239 nt)	sbcD	exonuclease subunit SbcD
*	?	NC_002947	2303461 =	97 (0.640)	10 (0.070)	7/248	NT	10.9%	intergenic (‑140/‑191)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2303546 =	77 (0.560)					intergenic (‑225/‑106)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	2312489 =	151 (0.990)	7 (0.050)	4/256	NT	5.1%	coding (275/1311 nt)	PP_2033	hypothetical protein
	?	NC_002947	2312546 =	122 (0.860)					coding (332/1311 nt)	PP_2033	hypothetical protein
*	?	NC_002947	= 2316776	138 (0.910)	8 (0.050)	5/274	NT	5.2%	coding (314/888 nt)	PP_2036	4‑hydroxy‑tetrahydrodipicolinate synthase
	?	NC_002947	= 2316836	156 (1.030)					coding (254/888 nt)	PP_2036	4‑hydroxy‑tetrahydrodipicolinate synthase
*	?	NC_002947	2416702 =	90 (0.590)	15 (0.100)	5/260	NT	16.8%	intergenic (+279/‑66)	PP_2114/PP_2115	transposase/hypothetical protein
	?	NC_002947	2532754 =	64 (0.450)					coding (28/369 nt)	PP_2219	hypothetical protein
*	?	NC_002947	2527569 =	138 (0.910)	9 (0.060)	5/272	NT	5.9%	coding (627/768 nt)	fadBA	type II 3‑hydroxyacyl‑CoA dehydrogenase
	?	NC_002947	2527613 =	150 (1.000)					coding (671/768 nt)	fadBA	type II 3‑hydroxyacyl‑CoA dehydrogenase
*	?	NC_002947	2665973 =	59 (0.390)	6 (0.050)	4/228	NT	12.4%	intergenic (+33/‑130)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
	?	NC_002947	2666054 =	36 (0.290)					intergenic (+114/‑49)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
*	?	NC_002947	= 2685318	137 (0.900)	7 (0.050)	3/242	NT	5.5%	intergenic (+29/+84)	prpE/PP_2352	propionyl‑CoA synthetase/hypothetical protein
	?	NC_002947	= 2685369	119 (0.890)					intergenic (+80/+33)	prpE/PP_2352	propionyl‑CoA synthetase/hypothetical protein
*	?	NC_002947	2898535 =	158 (1.040)	9 (0.070)	7/240	NT	7.2%	intergenic (+26/‑112)	PP_2550/PP_2551	transcriptional regulator/LysR family transcriptional regulator
	?	NC_002947	2898614 =	94 (0.710)					intergenic (+105/‑33)	PP_2550/PP_2551	transcriptional regulator/LysR family transcriptional regulator
*	?	NC_002947	2959037 =	78 (0.510)	14 (0.100)	13/246	NT	17.8%	intergenic (+27/‑169)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2959124 =	60 (0.440)					intergenic (+114/‑82)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	= 3015689	134 (0.880)	7 (0.050)	3/256	NT	5.0%	coding (256/2610 nt)	bcsA	cellulose synthase and translocator subunit
	?	NC_002947	= 3015732	140 (0.990)					coding (299/2610 nt)	bcsA	cellulose synthase and translocator subunit
*	?	NC_002947	3070779 =	127 (0.830)	8 (0.060)	6/260	NT	6.7%	intergenic (+65/‑98)	qedH‑II/aldB‑II	quinoprotein ethanol dehydrogenase/aldehyde dehydrogenase
	?	NC_002947	3070820 =	102 (0.710)					intergenic (+106/‑57)	qedH‑II/aldB‑II	quinoprotein ethanol dehydrogenase/aldehyde dehydrogenase
*	?	NC_002947	= 3074456	139 (0.910)	7 (0.050)	4/262	NT	5.1%	coding (197/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3074478	129 (0.890)					coding (219/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 3189931	131 (0.860)	8 (0.050)	4/272	NT	6.0%	coding (1582/1659 nt)	actP‑II	acetate permease
	?	NC_002947	= 3189962	121 (0.810)					coding (1613/1659 nt)	actP‑II	acetate permease
*	?	NC_002947	3341082 =	128 (0.840)	6 (0.050)	5/232	NT	6.4%	intergenic (‑119/+124)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
	?	NC_002947	3341170 =	69 (0.540)					intergenic (‑207/+36)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
*	?	NC_002947	3361905 =	135 (0.890)	8 (0.050)	7/270	NT	5.8%	coding (1327/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
	?	NC_002947	3361937 =	130 (0.870)					coding (1295/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
*	?	NC_002947	3368518 =	152 (1.000)	11 (0.070)	9/276	NT	6.8%	intergenic (+219/‑142)	PP_2962/PP_2964	alcohol dehydrogenase/transposase
	?	NC_002947	3736649 =	148 (0.970)					coding (681/1104 nt)	PP_3301	RND transporter membrane fusion protein
*	?	NC_002947	= 3385530	136 (0.890)	13 (0.090)	10/276	NT	8.5%	coding (501/546 nt)	PP_2985	hypothetical protein
	?	NC_002947	= 4167283	145 (0.950)					coding (785/1335 nt)	PP_3666	MHS family metabolite MFS transporter
*	?	NC_002947	= 3478215	157 (1.030)	9 (0.060)	5/266	NT	5.3%	coding (463/2517 nt)	PP_3087	excinuclease ABC subunit A
	?	NC_002947	= 3478251	173 (1.180)					coding (427/2517 nt)	PP_3087	excinuclease ABC subunit A
*	?	NC_002947	3524667 =	96 (0.630)	11 (0.100) +36 bp	3/204	NT	11.7%	intergenic (+489/‑208)	PP_5584/PP_3113	hypothetical protein/transposase
	?	NC_002947	= 4497669	129 (0.850)					coding (13/960 nt)	PP_3987	site‑specific recombinase
*	?	NC_002947	= 3524681	100 (0.660)	5 (0.040)	5/246	NT	5.0%	intergenic (+503/‑194)	PP_5584/PP_3113	hypothetical protein/transposase
	?	NC_002947	= 3524738	99 (0.730)					intergenic (+560/‑137)	PP_5584/PP_3113	hypothetical protein/transposase
*	?	NC_002947	= 3525326	NA (NA)	4 (0.030)	3/268	NT	NA	coding (74/1533 nt)	PP_3114	transposase
	?	NC_002947	= 3525349	NA (NA)					coding (97/1533 nt)	PP_3114	transposase
*	?	NC_002947	3579390 =	131 (0.860)	9 (0.070)	3/248	NT	7.2%	intergenic (+19/‑161)	PP_3157/PP_3158	inositol monophosphatase family protein/hypothetical protein
	?	NC_002947	3579445 =	116 (0.850)					intergenic (+74/‑106)	PP_3157/PP_3158	inositol monophosphatase family protein/hypothetical protein
*	?	NC_002947	= 3590081	59 (0.390)	17 (0.130)	10/236	NT	22.9%	intergenic (+37/‑38)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	= 3590109	64 (0.490)					intergenic (+65/‑10)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
*	?	NC_002947	= 3842093	193 (1.270)	11 (0.070)	6/266	NT	5.5%	coding (1051/1158 nt)	PP_3389	membrane protein
	?	NC_002947	= 3842123	189 (1.290)					coding (1081/1158 nt)	PP_3389	membrane protein
*	?	NC_002947	= 3910016	145 (0.950)	9 (0.060)	7/256	NT	6.2%	coding (364/432 nt)	PP_3449	hypothetical protein
	?	NC_002947	= 3910026	138 (0.980)					coding (374/432 nt) coding (9/2640 nt)	PP_3449 PP_3450	hypothetical protein TPR repeat‑containing protein
*	?	NC_002947	3949879 =	47 (0.310)	9 (0.070)	7/220	NT	19.7%	coding (136/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	3949964 =	36 (0.300)					coding (51/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3949906	48 (0.320)	15 (0.120)	8/220	NT	28.8%	coding (109/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	= 3949935	36 (0.300)					coding (80/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3953063	45 (0.300)	11 (0.090)	7/220	NT	17.8%	intergenic (‑61/+134)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	= 3953123	66 (0.540)					intergenic (‑121/+74)	PP_3486/PP_3487	cytochrome c/hypothetical protein
*	?	NC_002947	4024243 =	132 (0.870)	11 (0.070)	3/274	NT	7.5%	coding (29/942 nt)	PP_3547	NAD(P)‑binding oxidoreductase
	?	NC_002947	4910060 =	141 (0.930)					intergenic (‑69/‑213)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	4024709 =	114 (0.750)	14 (0.100)	4/260	NT	10.5%	intergenic (‑438/+230)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
	?	NC_002947	4024801 =	131 (0.910)					intergenic (‑530/+138)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	= 4152007	72 (0.470)	24 (0.180)	9/240	NT	26.7%	intergenic (+40/‑357)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
	?	NC_002947	= 4152038	69 (0.520)					intergenic (+71/‑326)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
*	?	NC_002947	= 4161047	93 (0.610)	13 (0.090)	5/250	NT	14.4%	intergenic (+29/‑180)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	= 4161109	71 (0.510)					intergenic (+91/‑118)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	4161049 =	94 (0.620)	17 (0.130)	6/244	NT	18.2%	intergenic (+31/‑178)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4161109 =	70 (0.520)					intergenic (+91/‑118)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	4349831 =	NA (NA)	3 (0.020)	3/268	NT	NA	coding (771/1422 nt)	PP_3820	group II intron‑encoding maturase
	?	NC_002947	4394295 =	NA (NA)					coding (686/1422 nt)	PP_3868	group II intron‑encoding maturase
*	?	NC_002947	4526434 =	76 (0.500)	8 (0.060)	6/248	NT	11.1%	intergenic (+91/‑102)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
	?	NC_002947	4526506 =	60 (0.440)					intergenic (+163/‑30)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
*	?	NC_002947	4535534 =	80 (0.530)	5 (0.040)	5/252	NT	6.6%	intergenic (+10/‑164)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
	?	NC_002947	4535623 =	68 (0.490)					intergenic (+99/‑75)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
*	?	NC_002947	= 4535545	75 (0.490)	11 (0.080)	8/252	NT	13.9%	intergenic (+21/‑153)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
	?	NC_002947	= 4535610	68 (0.490)					intergenic (+86/‑88)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
*	?	NC_002947	4539515 =	NA (NA)	24 (0.160)	9/266	NT	69.4%	coding (884/1533 nt)	PP_4025	transposase
	?	NC_002947	= 4628624	11 (0.070)					coding (848/1533 nt)	PP_4091	transposase
*	?	NC_002947	4553907 =	66 (0.430)	4 (0.030)	4/210	NT	11.4%	intergenic (+35/+146)	pydA/rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
	?	NC_002947	4554024 =	12 (0.100)					intergenic (+152/+29)	pydA/rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
*	?	NC_002947	= 4585460	71 (0.470)	13 (0.100)	9/236	NT	17.5%	intergenic (‑67/+104)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	= 4585521	62 (0.480)					intergenic (‑128/+43)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	4587985 =	79 (0.520)	15 (0.140)	15/200	NT	30.3%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4588089 =	12 (0.110)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4589965	126 (0.830)	8 (0.060)	5/248	NT	6.0%	intergenic (‑183/‑139)	PP_4063/ivd	long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase
	?	NC_002947	= 4590026	138 (1.010)					intergenic (‑244/‑78)	PP_4063/ivd	long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase
*	?	NC_002947	4593377 =	153 (1.000)	10 (0.070)	6/268	NT	6.3%	coding (480/816 nt)	liuC	methylglutaconyl‑CoA hydratase
	?	NC_002947	4593430 =	147 (0.990)					coding (533/816 nt)	liuC	methylglutaconyl‑CoA hydratase
*	?	NC_002947	= 4642954	116 (0.760)	9 (0.060)	8/252	NT	7.6%	coding (817/1383 nt)	gabP‑IV	gamma‑aminobutyrate permease
	?	NC_002947	= 4642970	113 (0.810)					coding (801/1383 nt)	gabP‑IV	gamma‑aminobutyrate permease
*	?	NC_002947	4649525 =	12 (0.080)	22 (0.200)	12/198	NT	52.0%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4649633 =	32 (0.290)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4649563	12 (0.080)	12 (0.110)	7/198	NT	37.2%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4649593	32 (0.290)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	4744569 =	135 (0.890)	7 (0.050)	4/262	NT	5.2%	coding (1390/1593 nt)	PP_4197	GntR family transcriptional regulator
	?	NC_002947	4744623 =	126 (0.870)					coding (1336/1593 nt)	PP_4197	GntR family transcriptional regulator
*	?	NC_002947	4810141 =	0 (0.000)	70 (0.620)	40/206	NT	68.0%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5990913	66 (0.580)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4810146	0 (0.000)	65 (0.470)	29/252	NT	52.2%	intergenic (‑288/‑267)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	5990743 =	119 (0.860)					intergenic (+59/‑487)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4854420	22 (0.140)	9 (0.080)	9/194	NT	23.0%	intergenic (‑124/+173)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
	?	NC_002947	= 4854479	45 (0.420)					intergenic (‑183/+114)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
*	?	NC_002947	= 4866376	148 (0.970)	10 (0.070)	7/252	NT	6.6%	coding (1464/3489 nt)	smc	chromosome partition protein Smc
	?	NC_002947	= 4866401	148 (1.060)					coding (1439/3489 nt)	smc	chromosome partition protein Smc
*	?	NC_002947	4872628 =	127 (0.830)	11 (0.070)	9/268	NT	8.1%	intergenic (+11/‑109)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	4872708 =	127 (0.860)					intergenic (+91/‑29)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
*	?	NC_002947	4888103 =	66 (0.430)	11 (0.090)	6/218	NT	20.2%	intergenic (+15/+108)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	4888190 =	35 (0.290)					intergenic (+102/+21)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	4891536 =	49 (0.320)	8 (0.070)	8/222	NT	14.6%	intergenic (+15/‑138)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	4891627 =	54 (0.440)					intergenic (+106/‑47)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	= 4891562	45 (0.300)	6 (0.050)	5/222	NT	11.7%	intergenic (+41/‑112)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	= 4891599	54 (0.440)					intergenic (+78/‑75)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	4895520 =	47 (0.310)	8 (0.070)	6/222	NT	18.4%	intergenic (+28/‑180)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	4895599 =	33 (0.270)					intergenic (+107/‑101)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	= 4895546	48 (0.320)	7 (0.060)	4/222	NT	16.4%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4895571	33 (0.270)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	4898345 =	58 (0.380)	17 (0.130)	11/234	NT	22.5%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4898434 =	68 (0.530)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4898365	62 (0.410)	29 (0.220)	11/234	NT	32.5%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4898412	68 (0.530)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4962906	124 (0.810)	9 (0.060)	7/268	NT	7.0%	intergenic (‑121/+143)	fliE/atoC	flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC
	?	NC_002947	= 4963009	118 (0.800)					intergenic (‑224/+40)	fliE/atoC	flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC
*	?	NC_002947	= 5046941	136 (0.890)	9 (0.060)	6/268	NT	6.0%	coding (228/237 nt)	PP_5681	hypothetical protein
	?	NC_002947	= 5046962	149 (1.010)					coding (207/237 nt)	PP_5681	hypothetical protein
*	?	NC_002947	= 5083558	136 (0.890)	8 (0.050)	7/268	NT	5.7%	intergenic (‑50/+53)	lysC/alaS	aspartokinase/alanine‑‑tRNA ligase
	?	NC_002947	= 5083605	135 (0.910)					intergenic (‑97/+6)	lysC/alaS	aspartokinase/alanine‑‑tRNA ligase
*	?	NC_002947	= 5114550	88 (0.580)	10 (0.080)	6/232	NT	11.4%	intergenic (‑169/+97)	rluB/PP_4497	23S rRNA pseudouridylate synthase B/hypothetical protein
	?	NC_002947	= 5114611	81 (0.630)					intergenic (‑230/+36)	rluB/PP_4497	23S rRNA pseudouridylate synthase B/hypothetical protein
*	?	NC_002947	= 5127055	91 (0.600)	20 (0.140)	7/258	NT	19.0%	intergenic (+59/‑123)	PP_4511/PP_4512	AraC family transcriptional regulator/DMT superfamily permease
	?	NC_002947	= 5127136	86 (0.600)					intergenic (+140/‑42)	PP_4511/PP_4512	AraC family transcriptional regulator/DMT superfamily permease
*	?	NC_002947	= 5161746	24 (0.160)	17 (0.140)	10/214	NT	38.4%	intergenic (+39/+67)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
	?	NC_002947	= 5161761	36 (0.310)					intergenic (+54/+52)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
*	?	NC_002947	5164540 =	63 (0.410)	17 (0.140)	12/224	NT	28.3%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5164624 =	35 (0.280)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	5212189 =	97 (0.640)	15 (0.110)	7/244	NT	16.8%	intergenic (‑85/+93)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	5212280 =	63 (0.470)					intergenic (‑176/+2)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	= 5236697	128 (0.840)	7 (0.050)	4/258	NT	5.2%	coding (61/2325 nt)	fecA	outer membrane ferric citrate porin
	?	NC_002947	= 5236710	135 (0.950)					coding (74/2325 nt)	fecA	outer membrane ferric citrate porin
*	?	NC_002947	5290364 =	50 (0.330)	4 (0.030)	3/216	NT	7.8%	intergenic (‑75/+109)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	5290458 =	56 (0.470)					intergenic (‑169/+15)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	= 5290393	50 (0.330)	13 (0.110)	6/216	NT	21.5%	intergenic (‑104/+80)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	= 5290427	56 (0.470)					intergenic (‑138/+46)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	5335165 =	119 (0.780)	15 (0.110)	9/246	NT	13.9%	intergenic (+27/‑216)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
	?	NC_002947	5335225 =	80 (0.590)					intergenic (+87/‑156)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
*	?	NC_002947	= 5384402	32 (0.210)	21 (0.190)	6/206	NT	44.8%	intergenic (+52/+81)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	= 5384430	28 (0.250)					intergenic (+80/+53)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	= 5494516	139 (0.910)	7 (0.050)	5/266	NT	5.0%	coding (1470/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
	?	NC_002947	= 5494536	130 (0.890)					coding (1450/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
*	?	NC_002947	5503386 =	110 (0.720)	5 (0.040)	5/244	NT	5.5%	intergenic (+27/‑192)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein
	?	NC_002947	5503464 =	75 (0.560)					intergenic (+105/‑114)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein
*	?	NC_002947	5515212 =	64 (0.420)	6 (0.050)	5/224	NT	9.0%	intergenic (+20/‑134)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	5515320 =	70 (0.570)					intergenic (+128/‑26)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	= 5515237	59 (0.390)	17 (0.140)	11/224	NT	22.4%	intergenic (+45/‑109)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	= 5515293	70 (0.570)					intergenic (+101/‑53)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	5521783 =	119 (0.780)	7 (0.050)	6/268	NT	5.5%	intergenic (‑84/‑142)	PP_4852/PP_4853	AraC family transcriptional regulator/DMT superfamily permease
	?	NC_002947	5521892 =	124 (0.840)					intergenic (‑193/‑33)	PP_4852/PP_4853	AraC family transcriptional regulator/DMT superfamily permease
*	?	NC_002947	5543111 =	95 (0.620)	5 (0.040)	4/242	NT	5.5%	intergenic (‑156/+160)	PP_4872/dnaB	hypothetical protein/replicative DNA helicase
	?	NC_002947	5543227 =	90 (0.670)					intergenic (‑272/+44)	PP_4872/dnaB	hypothetical protein/replicative DNA helicase
*	?	NC_002947	= 5543127	95 (0.620)	8 (0.060)	5/242	NT	8.5%	intergenic (‑172/+144)	PP_4872/dnaB	hypothetical protein/replicative DNA helicase
	?	NC_002947	= 5543209	90 (0.670)					intergenic (‑254/+62)	PP_4872/dnaB	hypothetical protein/replicative DNA helicase
*	?	NC_002947	5554012 =	147 (0.960)	8 (0.050)	5/268	NT	5.4%	coding (1271/1566 nt)	PP_4882	iron ABC transporter permease
	?	NC_002947	5554043 =	137 (0.930)					coding (1302/1566 nt)	PP_4882	iron ABC transporter permease
*	?	NC_002947	= 5562719	106 (0.700)	14 (0.100)	6/250	NT	12.2%	intergenic (‑250/+52)	hisZ/hflC	ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase
	?	NC_002947	= 5562730	106 (0.770)					intergenic (‑261/+41)	hisZ/hflC	ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase
*	?	NC_002947	5587649 =	142 (0.930)	8 (0.050)	5/264	NT	5.6%	coding (56/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	5587686 =	132 (0.910)					coding (19/2259 nt)	parC	DNA topoisomerase IV subunit A
*	?	NC_002947	5596065 =	50 (0.330)	12 (0.100)	3/220	NT	18.1%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5596158 =	69 (0.570)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5596092	51 (0.330)	15 (0.120)	8/220	NT	21.5%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5596129	69 (0.570)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5673611	59 (0.390)	7 (0.060)	4/228	NT	10.8%	intergenic (+57/‑113)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	= 5673648	67 (0.530)					intergenic (+94/‑76)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5683341	54 (0.350)	7 (0.060)	5/230	NT	13.6%	intergenic (‑85/+123)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
	?	NC_002947	= 5683410	44 (0.350)					intergenic (‑154/+54)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
*	?	NC_002947	= 5694540	151 (0.990)	12 (0.090)	9/254	NT	8.0%	intergenic (+31/‑139)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
	?	NC_002947	= 5694602	137 (0.980)					intergenic (+93/‑77)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
*	?	NC_002947	5761382 =	24 (0.160)	13 (0.110)	7/212	NT	43.8%	intergenic (+13/+143)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	5761474 =	15 (0.130)					intergenic (+105/+51)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	= 5761413	23 (0.150)	20 (0.170)	9/212	NT	55.1%	intergenic (+44/+112)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	= 5761441	15 (0.130)					intergenic (+72/+84)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	5788450 =	59 (0.390)	12 (0.100)	10/228	NT	18.9%	intergenic (+15/‑116)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5788535 =	54 (0.430)					intergenic (+100/‑31)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	= 5788473	57 (0.370)	7 (0.060)	6/228	NT	12.2%	intergenic (+38/‑93)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	= 5788510	54 (0.430)					intergenic (+75/‑56)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	5818832 =	41 (0.270)	10 (0.080)	6/240	NT	21.4%	intergenic (+40/+89)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5818895 =	38 (0.290)					intergenic (+103/+26)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5818849	41 (0.270)	15 (0.110)	9/240	NT	29.0%	intergenic (+57/+72)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5818876	38 (0.290)					intergenic (+84/+45)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	5829793 =	172 (1.130)	11 (0.080)	7/254	NT	6.4%	intergenic (+17/+182)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
	?	NC_002947	5829901 =	166 (1.180)					intergenic (+125/+74)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
*	?	NC_002947	= 5872267	65 (0.430)	11 (0.090)	8/218	NT	16.9%	intergenic (+50/+84)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	= 5872302	57 (0.470)					intergenic (+85/+49)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	5876526 =	160 (1.050)	18 (0.130)	8/254	NT	11.8%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5876608 =	122 (0.870)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	= 5876536	167 (1.100)	9 (0.060)	5/254	NT	6.1%	intergenic (‑50/+98)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	= 5876596	122 (0.870)					intergenic (‑110/+38)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	5878962 =	64 (0.420)	15 (0.120)	7/228	NT	21.8%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5879044 =	55 (0.440)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	= 5878985	62 (0.410)	5 (0.040)	3/228	NT	8.6%	intergenic (+29/+76)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	= 5879019	55 (0.440)					intergenic (+63/+42)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	5905749 =	51 (0.330)	16 (0.120)	7/244	NT	26.0%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5905809 =	46 (0.340)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	= 5905764	53 (0.350)	11 (0.080)	9/244	NT	19.2%	intergenic (+42/+65)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5905792	46 (0.340)					intergenic (+70/+37)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5905825 =	67 (0.440)	4 (0.030)	4/262	NT	5.9%	intergenic (+103/+4)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5905868 =	63 (0.440)					coding (855/894 nt)	spuH	spermidine/putrescine ABC transporter permease
*	?	NC_002947	5916135 =	42 (0.280)	29 (0.240)	11/220	NT	45.5%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5916231 =	36 (0.300)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5916162	40 (0.260)	9 (0.070)	8/220	NT	21.0%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5916202	36 (0.300)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	5949065 =	120 (0.790)	10 (0.070)	6/254	NT	8.6%	intergenic (‑79/+127)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
	?	NC_002947	5949170 =	102 (0.730)					intergenic (‑184/+22)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
*	?	NC_002947	5970388 =	66 (0.430)	6 (0.050)	5/232	NT	11.3%	coding (162/360 nt)	PP_5723	hypothetical protein
	?	NC_002947	5970492 =	39 (0.300)					coding (58/360 nt)	PP_5723	hypothetical protein
*	?	NC_002947	= 6001305	106 (0.700)	7 (0.050)	6/246	NT	6.4%	intergenic (‑182/‑139)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
	?	NC_002947	= 6001335	111 (0.820)					intergenic (‑212/‑109)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
*	?	NC_002947	= 6021248	98 (0.640)	13 (0.100)	10/230	NT	13.2%	intergenic (‑71/+74)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	= 6021278	89 (0.700)					intergenic (‑101/+44)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
*	?	NC_002947	= 6062422	88 (0.580)	11 (0.080)	5/248	NT	12.2%	intergenic (+80/+101)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	= 6062481	79 (0.580)					intergenic (+139/+42)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	6062424 =	87 (0.570)	16 (0.110)	5/256	NT	16.7%	intergenic (+82/+99)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	6062481 =	79 (0.560)					intergenic (+139/+42)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 6079822	97 (0.640)	11 (0.090)	9/228	NT	11.8%	intergenic (‑146/+92)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
	?	NC_002947	= 6079874	85 (0.680)					intergenic (‑198/+40)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter