Sat Jul 18 00:40:51 2020

/usr/bin/breseq-0.33.1-Linux-x86_64/bin/breseq -j 1 --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -o breseq_processes/11 -r /var/data/P_putida_KT2440_SBRG_200401_xylD_new.gb /var/alemutpipe-outputs/good/JBEI_Xylose_A28_F56_I3_S20_R1_001.good.fq.gz /var/alemutpipe-outputs/good/JBEI_Xylose_A28_F56_I3_S20_R2_001.good.fq.gz