Fri Jun 15 20:29:04 2018 breseq -p -j 3 --polymorphism-frequency-cutoff 0.025 -r CP009273_1.gb -o A8_F017_R1_F28_I0 A8_F017_R1_F28_I0_S2188_L001_R1_001.good.fq.gz A8_F017_R1_F28_I0_S2188_L001_R2_001.good.fq.gz