Fri Sep 11 09:46:05 2020

/usr/bin/breseq-0.33.1-Linux-x86_64/bin/breseq -j 1 --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -o breseq_processes/45 -r /var/data/NC_000913_3.gb /var/alemutpipe-outputs/good/BOP27_pfkA_S2176_L006_R1_001.good.fq.gz /var/alemutpipe-outputs/good/BOP27_pfkA_S2176_L006_R2_001.good.fq.gz /var/alemutpipe-outputs/good/BOP27_pfkA_S2176_L008_R1_001.good.fq.gz /var/alemutpipe-outputs/good/BOP27_pfkA_S2176_L008_R2_001.good.fq.gz