mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| MC JC | 257,908 | Δ776 bp | 100% | [crl] | [crl] | |
| RA | 353,610 | C→G | 18.7% | A302G (GCG→GGG) | prpE → | propionate‑‑CoA ligase |
| RA | 357,248 | Δ1 bp | 2.6% | coding (1078/1284 nt) | codA → | cytosine/isoguanine deaminase |
| RA | 374,944 | G→A | 4.3% | intergenic (+63/‑515) | mhpE → / → mhpT | 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I/3‑hydroxyphenylpropionic transporter |
| RA | 385,818 | T→G | 13.8% | V196G (GTC→GGC) | tauA → | taurine ABC transporter periplasmic binding protein |
| RA | 386,999 | A→G | 3.5% | H10R (CAT→CGT) | tauC → | taurine ABC transporter permease |
| RA | 422,231 | A→T | 13.7% | I416F (ATC→TTC) | proY → | proline‑specific permease |
| RA | 433,649 | T→G | 27.1% | G65G (GGT→GGG) | ribD → | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase |
| RA | 452,427 | A→C | 16.1% | G373G (GGT→GGG) | ampG ← | muropeptide transporter |
| RA | 599,239 | Δ1 bp | 2.6% | coding (526/3144 nt) | cusA → | copper/silver efflux system, membrane component |
| RA | 599,612 | T→G | 14.2% | V300G (GTG→GGG) | cusA → | copper/silver efflux system, membrane component |
| RA | 722,927 | A→T | 3.4% | A496A (GCT→GCA) | kdpD ← | fused sensory histidine kinase in two‑component regulatory system with KdpE: signal sensing protein |
| RA | 825,230 | C→A | 16.3% | M293I (ATG→ATT) | ybhR ← | putative ABC transporter permease |
| RA | 836,592 | T→G | 16.5% | V81G (GTC→GGC) | ybiC → | putative dehydrogenase |
| RA | 836,625 | T→G | 14.7% | V92G (GTC→GGC) | ybiC → | putative dehydrogenase |
| RA | 859,732 | A→T | 2.8% | D99E (GAT→GAA) | ybiV ← | sugar phosphatase, fructose‑1‑P/ribose‑5‑P/glucose‑6‑P phosphatase |
| RA | 954,374 | C→G | 14.2% | P31P (CCG→CCC) | focA ← | formate channel |
| RA | 976,132 | Δ1 bp | 2.8% | coding (511/705 nt) | mukE → | chromosome condensin MukBEF, MukE localization factor |
| RA | 989,943 | T→G | 22.4% | S138S (TCA→TCC) | pncB ← | nicotinate phosphoribosyltransferase |
| RA | 989,959 | A→C | 17.6% | V133G (GTA→GGA) | pncB ← | nicotinate phosphoribosyltransferase |
| RA | 1,078,659 | T→G | 11.8% | H75P (CAC→CCC) | putA ← | fused DNA‑binding transcriptional regulator/proline dehydrogenase/pyrroline‑5‑carboxylate dehydrogenase |
| RA | 1,143,829 | A→C | 94.5% | L180R (CTG→CGG) | rne ← | endoribonuclease, RNA‑binding protein,RNA degradosome binding protein |
| RA | 1,196,305 | C→T | 100% | R395C (CGT→TGT) | icd → | isocitrate dehydrogenase, e14 prophage attachment site, tellurite reductase |
| RA | 1,358,812 | A→G | 20.6% | S126P (TCC→CCC) | puuP ← | putrescine importer |
| RA | 1,360,585 | A→G | 9.3% | T108T (ACT→ACC) | puuA ← | glutamate‑‑putrescine ligase |
| RA | 1,451,640 | Δ1 bp | 3.4% | coding (2003/2046 nt) | paaZ ← | oxepin‑CoA hydrolase and 3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase |
| RA | 1,466,210 | G→A | 4.2% | pseudogene (819/2513 nt) | ydbA → | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| RA | 1,611,919 | C→A | 16.2% | intergenic (‑65/+47) | yneF ← / ← yneG | putative membrane‑bound diguanylate cyclase/DUF4186 family protein |
| RA | 1,706,082 | T→G | 8.5% | F106V (TTT→GTT) | rsxA → | SoxR iron‑sulfur cluster reduction factor component, inner membrane protein of electron transport complex |
| RA | 1,708,930 | C→A | 12.5% | P671Q (CCG→CAG) | rsxC → | SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| RA | 2,043,021 | Δ1 bp | 8.3% | intergenic (+123/+447) | yodB → / ← serU | cytochrome b561 homolog/tRNA‑Ser |
| RA | 2,132,787 | A→C | 100% | I204S (ATC→AGC) | wcaA ← | putative glycosyl transferase |
| RA | 2,151,689 | G→T | 30.3% | intergenic (+43/+22) | yegJ → / ← yegK | uncharacterized protein/ser/thr phosphatase‑related protein |
| RA | 2,228,308 | G→C | 14.4% | pseudogene (300/1287 nt) | mdtQ ← | pseudogene, putative channel/filament proteins |
| RA | 2,304,520 | G→T | 5.8% | intergenic (+129/+586) | eco → / ← mqo | ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain |
| RA | 2,304,521 | G→C | 5.7% | intergenic (+130/+585) | eco → / ← mqo | ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain |
| RA | 2,335,096 | G→A | 3.5% | P516L (CCG→CTG) | yfaA ← | DUF2138 family protein, putative host defense protein |
| RA | 2,378,967 | T→C | 16.1% | G97G (GGA→GGG) | menD ← | 2‑succinyl‑5‑enolpyruvyl‑6‑hydroxy‑3‑ cyclohexene‑1‑carboxylate synthase, SEPHCHC synthase |
| RA | 2,383,621 | A→T | 25.0% | D304V (GAT→GTT) | elaD → | protease, capable of cleaving an AMC‑ubiquitin model substrate |
| RA | 2,434,880 | T→G | 25.8% | Y252S (TAC→TCC) | truA ← | tRNA pseudouridine(38‑40) synthase |
| RA | 2,445,138:1 | +C | 4.4% | coding (421/810 nt) | yfcA ← | TauE/TSUP family inner membrane protein |
| RA | 2,608,229 | A→G | 14.9% | M439V (ATG→GTG) | hyfF → | hydrogenase 4, membrane subunit |
| RA | 2,608,251 | C→G | 9.8% | A446G (GCG→GGG) | hyfF → | hydrogenase 4, membrane subunit |
| RA | 2,818,451 | C→T | 5.1% | intergenic (‑179/+20) | argY ← / ← argV | tRNA‑Arg/tRNA‑Arg |
| RA | 2,828,504 | T→G | 20.4% | V257G (GTG→GGG) | srlD → | sorbitol‑6‑phosphate dehydrogenase |
| RA | 2,833,565 | T→G | 17.5% | G364G (GGT→GGG) | norV → | anaerobic nitric oxide reductase flavorubredoxin |
| RA | 3,205,084 | A→T | 9.3% | L131F (TTA→TTT) | plsY → | putative glycerol‑3‑phosphate acyltransferase |
| RA | 3,206,436 | G→A | 18.0% | intergenic (‑182/‑25) | ttdR ← / → ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,454 | A→G | 10.3% | intergenic (‑200/‑7) | ttdR ← / → ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,469 | C→G | 18.3% | S3R (AGC→AGG) | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,474 | G→A | 12.0% | S5N (AGT→AAT) ‡ | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,475 | T→A | 21.3% | S5R (AGT→AGA) ‡ | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,481 | G→A | 30.5% | K7K (AAG→AAA) | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,482 | C→A | 18.6% | Q8K (CAA→AAA) | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,485 | C→A | 19.9% | Q9K (CAG→AAG) | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,492 | T→A | 10.7% | V11E (GTG→GAG) | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,504 | C→A | 9.5% | T15K (ACA→AAA) | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,298,058 | Δ1 bp | 3.1% | coding (79/1041 nt) | yraQ ← | putative inner membrane permease |
| RA | 3,436,119 | T→C | 3.1% | R305R (CGT→CGC) | rsmB → | 16S rRNA m(5)C967 methyltransferase, SAM‑dependent |
| RA | 3,468,600 | T→C | 3.5% | S418G (AGC→GGC) | chiA ← | periplasmic endochitinase |
| RA | 3,520,794 | G→T | 9.1% | T75K (ACA→AAA) | hofP ← | DNA catabolic protein |
| RA | 3,571,847:1 | +G | 3.0% | coding (1655/2187 nt) | glgB ← | 1,4‑alpha‑glucan branching enzyme |
| RA | 3,617,326 | A→C | 16.2% | T105P (ACC→CCC) | nikD → | nickel ABC transporter ATPase |
| RA | 3,665,701 | C→A | 100% | A37S (GCG→TCG) | gadX ← | acid resistance regulon transcriptional activator, autoactivator |
| RA | 3,760,383 | A→C | 22.5% | V289G (GTG→GGG) | selA ← | selenocysteine synthase |
| RA | 3,782,907 | T→G | 27.1% | T252P (ACC→CCC) | gpsA ← | glycerol‑3‑phosphate dehydrogenase (NAD+) |
| RA | 3,782,912 | A→C | 15.3% | V250G (GTG→GGG) | gpsA ← | glycerol‑3‑phosphate dehydrogenase (NAD+) |
| RA | 3,786,532 | T→G | 15.6% | V425G (GTG→GGG) | gpmM → | phosphoglycero mutase III, cofactor‑independent |
| MC JC | 3,815,858 | Δ82 bp | 100% | [rph]–[rph] | [rph], [rph] | |
| RA | 3,862,669 | T→A | 28.3% | pseudogene (934/1617 nt) | glvC ← | pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
| RA | 3,864,958 | T→C | 18.4% | I439V (ATC→GTC) | yidE ← | putative transporter |
| RA | 3,904,282 | T→G | 11.1% | I439L (ATC→CTC) | bglF ← | fused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component |
| JC | 4,001,644 | Δ5 bp | 100% | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| RA | 4,027,131 | A→G | 11.1% | G202G (GGA→GGG) | fre → | NAD(P)H‑flavin reductase |
| RA | 4,027,145 | C→G | 17.8% | A207G (GCG→GGG) | fre → | NAD(P)H‑flavin reductase |
| RA | 4,135,825 | Δ1 bp | 2.6% | coding (1992/2181 nt) | katG → | catalase‑peroxidase HPI, heme b‑containing |
| RA | 4,151,328 | T→G | 28.1% | A590A (GCA→GCC) | ppc ← | phosphoenolpyruvate carboxylase |
| RA | 4,162,525 | G→T | 9.5% | Q249K (CAA→AAA) | trmA ← | tRNA m(5)U54 methyltransferase, SAM‑dependent, tmRNA m(5)U341 methyltransferase |
| RA | 4,184,542 | C→A | 100% | P1100Q (CCG→CAG) | rpoB → | RNA polymerase, beta subunit |
| RA | 4,237,260 | T→C | 21.0% | V122A (GTC→GCC) | yjbG → | extracellular polysaccharide export OMA protein |
| RA | 4,296,059 | C→T | 5.7% | intergenic (+266/+378) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| RA | 4,296,267 | T→C | 8.4% | intergenic (+474/+170) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| RA | 4,325,949 | A→G | 5.1% | intergenic (‑207/+451) | yjdN ← / ← yjdM | metalloprotein superfamily protein/zinc‑ribbon family protein |
| RA | 4,345,640 | G→A | 4.0% | intergenic (‑81/+41) | yjdF ← / ← fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) |
| RA | 4,345,641 | A→T | 4.0% | intergenic (‑82/+40) | yjdF ← / ← fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) |
| RA | 4,345,642 | T→C | 4.0% | intergenic (‑83/+39) | yjdF ← / ← fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) |
| RA | 4,345,644 | A→C | 3.8% | intergenic (‑85/+37) | yjdF ← / ← fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) |
| RA | 4,394,323 | T→G | 13.3% | V86G (GTC→GGC) | nnr → | bifunctional NAD(P)H‑hydrate repair enzyme, C‑terminal domain ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase and N‑terminal domain NAD(P)H‑hydrate epimerase |
| RA | 4,394,335 | T→G | 14.4% | V90G (GTC→GGC) | nnr → | bifunctional NAD(P)H‑hydrate repair enzyme, C‑terminal domain ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase and N‑terminal domain NAD(P)H‑hydrate epimerase |
| RA | 4,396,209 | T→A | 3.3% | D48E (GAT→GAA) | amiB → | N‑acetylmuramoyl‑l‑alanine amidase II |
| RA | 4,536,225 | T→A | 18.2% | intergenic (+193/+390) | yjhR → / ← nanS | pseudogene, helicase family, putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase |
| RA | 4,571,097 | A→G | 14.7% | L160P (CTC→CCC) | yjiR ← | putative DNA‑binding transcriptional regulator/putative aminotransferase |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 384783 | 385086 | 304 | 42 [40] | [38] 41 | yaiS/tauA | putative PIG‑L family deacetylase/taurine ABC transporter periplasmic binding protein |
| * | * | ÷ | NC_000913 | 583140 | 583824 | 685 | 43 [36] | [39] 41 | [appY] | [appY] |
| * | * | ÷ | NC_000913 | 1978500 | 1979280 | 781 | 42 [39] | [39] 41 | insB1–insA | insB1, insA |
| * | * | ÷ | NC_000913 | 3423862–3424231 | 3424453–3424237 | 7–592 | 42 [40] | [39] 43 | [rrlD] | [rrlD] |
| * | * | ÷ | NC_000913 | 3798868 | 3799539 | 672 | 42 [40] | [40] 42 | [waaU]–[waaZ] | [waaU], [waaZ] |
| * | * | ÷ | NC_000913 | 4233736 | 4235443 | 1708 | 42 [39] | [40] 42 | pgi | pgi |
| * | * | ÷ | NC_000913 | 4476728 | 4477170 | 443 | 41 [39] | [38] 42 | yjgL | SopA‑central‑domain‑like hexapeptide repeat protein |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 116 (1.020) | 77/432 | NT | 98.3% | intergenic (+9/‑768) | crl/crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers |
| ? | NC_000913 | = 1293039 | 2 (0.020) | intergenic (‑117/‑488) | hns/tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase | |||||
| * | ? | NC_000913 | = 366099 | 90 (0.790) | 5 (0.050) | 5/410 | NT | 5.3% | coding (207/3075 nt) | lacZ | beta‑D‑galactosidase |
| ? | NC_000913 | = 366105 | 93 (0.860) | coding (201/3075 nt) | lacZ | beta‑D‑galactosidase | |||||
| * | ? | NC_000913 | 458788 = | 4 (0.040) | 118 (1.060) | 69/424 | NT | 96.8% | intergenic (+88/‑100) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | 608011 = | NA (NA) | intergenic (+23/‑54) | hokE/insL1 | toxic polypeptide, small/IS186 transposase | |||||
| * | ? | NC_000913 | = 458799 | 2 (0.020) | 102 (0.910) | 58/424 | NT | 98.1% | intergenic (+99/‑89) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | = 609347 | NA (NA) | intergenic (+170/+112) | insL1/entD | IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex | |||||
| * | ? | NC_000913 | 1207790 = | 92 (0.810) | 26 (0.250) | 23/400 | NT | 26.2% | coding (290/630 nt) | stfP | e14 prophage, uncharacterized protein |
| ? | NC_000913 | 1209619 = | 61 (0.580) | pseudogene (1/501 nt) | stfE | pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related | |||||
| * | ? | NC_000913 | = 1207805 | 90 (0.790) | 26 (0.250) | 21/400 | NT | 26.5% | coding (305/630 nt) | stfP | e14 prophage, uncharacterized protein |
| ? | NC_000913 | = 1209602 | 61 (0.580) | pseudogene (18/501 nt) | stfE | pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related | |||||
| * | ? | NC_000913 | 1293032 = | 1 (0.010) | 120 (1.050) | 74/432 | NT | 99.2% | intergenic (‑110/‑495) | hns/tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| ? | NC_000913 | = 1979270 | NA (NA) | intergenic (‑55/‑483) | insA/uspC | IS1 repressor TnpA/universal stress protein | |||||
| * | ? | NC_000913 | = 1299498 | 0 (0.000) | 34 (0.300) | 32/424 | NT | 100% | intergenic (+253/‑1684) | ychE/oppA | UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein |
| ? | NC_000913 | 1300698 = | 0 (0.000) | intergenic (+1453/‑484) | ychE/oppA | UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 1701107 | 111 (0.970) | 3 (0.030) | 3/414 | NT | 2.7% | coding (151/1173 nt) | malY | PLP‑dependent beta‑cystathionase and maltose regulon regulator |
| ? | NC_000913 | = 1701108 | 111 (1.020) | coding (152/1173 nt) | malY | PLP‑dependent beta‑cystathionase and maltose regulon regulator | |||||
| * | ? | NC_000913 | = 1978502 | 0 (0.000) | 34 (0.310) | 25/416 | NT | 100% | intergenic (‑305/+16) | flhD/insB1 | flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B |
| ? | NC_000913 | 1979279 = | 0 (0.000) | intergenic (‑64/‑474) | insA/uspC | IS1 repressor TnpA/universal stress protein | |||||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 36 (0.320) | 24/432 | NT | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | intergenic (‑5/+146) | wbbL/insH1 | pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 88 (0.770) | 61/432 | NT | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290111 | NA (NA) | intergenic (‑32/+1) | insH1/yejO | IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system | |||||
| * | ? | NC_000913 | = 2319245 | 94 (0.830) | 3 (0.030) | 3/416 | NT | 3.2% | coding (630/2850 nt) | rcsC | hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| ? | NC_000913 | = 2319262 | 91 (0.830) | coding (613/2850 nt) | rcsC | hybrid sensory kinase in two‑component regulatory system with RcsB and YojN | |||||
| * | ? | NC_000913 | = 2818273 | 111 (0.970) | 3 (0.040) | 3/274 | NT | 4.4% | intergenic (‑1/+198) | argY/argV | tRNA‑Arg/tRNA‑Arg |
| ? | NC_000913 | 2818549 = | 61 (0.850) | intergenic (‑2/+2) | argV/serV | tRNA‑Arg/tRNA‑Ser | |||||
| * | ? | NC_000913 | = 4054136 | 113 (0.990) | 4 (0.040) | 4/414 | NT | 3.5% | coding (1142/1410 nt) | glnG | fused DNA‑binding response regulator in two‑component regulatory system with GlnL: response regulator/sigma54 interaction protein |
| ? | NC_000913 | = 4054156 | 112 (1.030) | coding (1122/1410 nt) | glnG | fused DNA‑binding response regulator in two‑component regulatory system with GlnL: response regulator/sigma54 interaction protein | |||||
| * | ? | NC_000913 | = 4162514 | 90 (0.790) | 4 (0.040) | 4/420 | NT | 4.1% | coding (756/1101 nt) | trmA | tRNA m(5)U54 methyltransferase, SAM‑dependent, tmRNA m(5)U341 methyltransferase |
| ? | NC_000913 | = 4162525 | 100 (0.900) | coding (745/1101 nt) | trmA | tRNA m(5)U54 methyltransferase, SAM‑dependent, tmRNA m(5)U341 methyltransferase | |||||
| * | ? | NC_000913 | = 4345637 | 89 (0.780) | 4 (0.040) | 4/420 | NT | 4.4% | intergenic (‑78/+44) | yjdF/fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) |
| ? | NC_000913 | = 4345644 | 88 (0.800) | intergenic (‑85/+37) | yjdF/fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) | |||||
| * | ? | NC_000913 | 4542683 = | 15 (0.130) | 6 (0.050) | 6/414 | NT | 13.7% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542997 = | 61 (0.560) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||