Thu Jan 5 10:56:23 2017 /home/pphaneuf/breseq/breseq-0.29.0-Linux-x86_64/bin/breseq -j 8 -r NC_000913_3.gb -o qtrim-IND_KHP_HOT_A9_F200_I1_R1 qtrim-IND_KHP_HOT_A9_F200_I1_R1_S42_L004_R2_001.fastq qtrim-IND_KHP_HOT_A9_F200_I1_R1_S42_L004_R1_001.fastq