Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1354899	1355353	455	94 [0]	[0] 43	[sapD]–[sapC]	[sapD],[sapC]

TCATCACTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCTTT  >  W3110S.gb/1354838‑1354898                                                             | tcatcaCTTTCTGACATTCACCTTCGGTCATCTCATAGGGAAAACTGCGCATCGCATCttt  >  1:91578/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:650460/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:667464/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:638826/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:629032/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:611266/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:603405/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:595040/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:561830/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:560435/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:549952/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:530011/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:515713/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:504877/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:494465/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:454643/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:443086/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:44262/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:435518/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:423314/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:407326/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:402310/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:390477/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:379950/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:882058/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:989391/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:988017/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:986207/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:9798/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:976294/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:970897/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:969660/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:966027/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:941871/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:938602/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:935580/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:655838/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:83976/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:825917/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:81809/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:80830/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:76030/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:757676/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:716308/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:710341/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:67132/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:361042/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1190608/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:142265/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1407169/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1397826/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1374596/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1370504/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1358810/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1347005/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:134075/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1331514/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1297661/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1202611/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1428689/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1177352/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1133890/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1120962/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1094951/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1066720/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1065885/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1061418/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1048022/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1036784/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1009297/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1640145/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:313773/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:301836/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:294736/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:271915/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:264122/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:237672/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:234252/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:234205/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:224375/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:168821/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1002644/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1630766/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1610599/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:159370/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1552085/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1535039/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1530181/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1523894/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1509873/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1488008/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1477594/1‑61 (MQ=255) tcatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1440888/1‑61 (MQ=255) taatcaCTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCttt  >  1:1113322/3‑61 (MQ=255)                                                             | TCATCACTTTCTGACATTCACCTTCGGTCAACTCATAGGGAAAACTGCGCATCGCATCTTT  >  W3110S.gb/1354838‑1354898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑