breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	393	T→G	30.0%	R19R (CGT→CGG)	thrA →	fused aspartokinase I and homoserine dehydrogenase I
RA	1,044	C→T	42.1%	D236D (GAC→GAT)	thrA →	fused aspartokinase I and homoserine dehydrogenase I
RA	1,407	C→T	49.5%	S357S (AGC→AGT)	thrA →	fused aspartokinase I and homoserine dehydrogenase I
RA	1,665	A→C	33.6%	V443V (GTA→GTC)	thrA →	fused aspartokinase I and homoserine dehydrogenase I
RA	2,247	T→A	32.2%	S637S (TCT→TCA)	thrA →	fused aspartokinase I and homoserine dehydrogenase I
RA	7,456	G→T	28.8%	R168R (CGC→CGA)	yaaJ ←	predicted transporter
RA	7,459	G→C	28.8%	A167A (GCC→GCG)	yaaJ ←	predicted transporter
RA	7,496	C→G	32.7%	G155A (GGC→GCC)	yaaJ ←	predicted transporter
RA	7,498	A→G	31.5%	Y154Y (TAT→TAC)	yaaJ ←	predicted transporter
RA	9,238	G→A	34.7%	intergenic (+47/‑68)	talB → / → mog	transaldolase B/predicted molybdochelatase
RA	10,173	C→T	62.8%	V108I (GTA→ATA)	yaaH ←	conserved inner membrane protein associated with acetate transport
RA	11,087	C→G	22.1%	R90R (CGG→CGC)  A86A (GCC→GCG)	yaaW ← htgA →	conserved hypothetical protein hypothetical protein
RA	15,001	C→T	27.2%	G278G (GGC→GGT)	dnaJ →	chaperone Hsp40, co‑chaperone with DnaK
RA	17,076	C→A	21.4%	A349A (GCC→GCA)	nhaA →	sodium‑proton antiporter
RA	17,513	T→C	22.4%	I86I (ATT→ATC)	nhaR →	DNA‑binding transcriptional activator
RA	17,516	G→C	22.5%	V87V (GTG→GTC)	nhaR →	DNA‑binding transcriptional activator
RA	17,531	A→G	19.0%	E92E (GAA→GAG)	nhaR →	DNA‑binding transcriptional activator
RA	17,537	T→C	21.2%	N94N (AAT→AAC)	nhaR →	DNA‑binding transcriptional activator
RA	20,146	C→G	49.2%	P26P (CCC→CCG)	ileS →	isoleucyl‑tRNA synthetase
RA	21,463	C→T	57.8%	S465S (TCC→TCT)	ileS →	isoleucyl‑tRNA synthetase
RA	21,472	C→T	59.1%	R468R (CGC→CGT)	ileS →	isoleucyl‑tRNA synthetase
RA	21,481	T→C	60.4%	G471G (GGT→GGC)	ileS →	isoleucyl‑tRNA synthetase
RA	21,484	A→G	54.1%	V472V (GTA→GTG)	ileS →	isoleucyl‑tRNA synthetase
RA	21,514	G→A	46.6%	T482T (ACG→ACA)	ileS →	isoleucyl‑tRNA synthetase
RA	21,520	G→A	46.6%	E484E (GAG→GAA)	ileS →	isoleucyl‑tRNA synthetase
RA	21,535	C→T	34.7%	T489T (ACC→ACT)	ileS →	isoleucyl‑tRNA synthetase
RA	21,538	T→C	34.7%	L490L (CTT→CTC)	ileS →	isoleucyl‑tRNA synthetase
RA	21,574	C→T	45.2%	V502V (GTC→GTT)	ileS →	isoleucyl‑tRNA synthetase
RA	21,895	T→C	24.7%	N609N (AAT→AAC)	ileS →	isoleucyl‑tRNA synthetase
RA	22,613	T→G	33.3%	S849A (TCG→GCG)	ileS →	isoleucyl‑tRNA synthetase
RA	24,212	T→C	53.7%	S86S (AGT→AGC)	ispH →	1‑hydroxy‑2‑methyl‑2‑(E)‑butenyl 4‑diphosphate reductase, 4Fe‑4S protein
RA	25,217	G→A	52.3%	E83K (GAA→AAA)	rihC →	ribonucleoside hydrolase 3
RA	25,774	G→T	100%	V268V (GTG→GTT)	rihC →	ribonucleoside hydrolase 3
RA	26,138	G→A	100%	E29E (GAG→GAA)	dapB →	dihydrodipicolinate reductase
RA	26,789	C→T	24.4%	G246G (GGC→GGT)	dapB →	dihydrodipicolinate reductase
RA	27,553	A→T	37.1%	V75V (GTA→GTT)	carA →	carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
RA	27,559	A→C	36.5%	A77A (GCA→GCC)	carA →	carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
RA	27,925	T→C	49.2%	F199F (TTT→TTC)	carA →	carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
RA	27,949	G→T	80.9%	R207R (CGG→CGT)	carA →	carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
RA	28,911	T→C	33.3%	I139I (ATT→ATC)	carB →	carbamoyl‑phosphate synthase large subunit
RA	28,977	C→A	68.8%	D161E (GAC→GAA)	carB →	carbamoyl‑phosphate synthase large subunit
RA	28,980	G→T	67.8%	V162V (GTG→GTT)	carB →	carbamoyl‑phosphate synthase large subunit
RA	29,400	A→G	34.0%	P302P (CCA→CCG)	carB →	carbamoyl‑phosphate synthase large subunit
RA	29,403	C→T	31.7%	R303R (CGC→CGT)	carB →	carbamoyl‑phosphate synthase large subunit
RA	29,409	C→G	34.1%	S305S (TCC→TCG)	carB →	carbamoyl‑phosphate synthase large subunit
RA	29,541	G→A	37.1%	E349E (GAG→GAA)	carB →	carbamoyl‑phosphate synthase large subunit
RA	30,714	G→A	62.8%	T740T (ACG→ACA)	carB →	carbamoyl‑phosphate synthase large subunit
RA	30,808	A→G	100%	M772V (ATG→GTG)	carB →	carbamoyl‑phosphate synthase large subunit
RA	31,416	C→T	67.6%	T974T (ACC→ACT)	carB →	carbamoyl‑phosphate synthase large subunit
RA	34,045	T→C	42.8%	Q491Q (CAA→CAG)	caiC ←	predicted crotonobetaine CoA ligase:carnitine CoA ligase
RA	34,051	G→A	35.4%	C489C (TGC→TGT)	caiC ←	predicted crotonobetaine CoA ligase:carnitine CoA ligase
RA	34,059	G→A	41.5%	R487C (CGC→TGC)	caiC ←	predicted crotonobetaine CoA ligase:carnitine CoA ligase
RA	34,063	A→G	41.5%	F485F (TTT→TTC)	caiC ←	predicted crotonobetaine CoA ligase:carnitine CoA ligase
RA	34,465	C→G	44.2%	G351G (GGG→GGC)	caiC ←	predicted crotonobetaine CoA ligase:carnitine CoA ligase
RA	34,469	A→G	41.6%	V350A (GTG→GCG)	caiC ←	predicted crotonobetaine CoA ligase:carnitine CoA ligase
RA	34,492	T→C	48.3%	R342R (CGA→CGG)	caiC ←	predicted crotonobetaine CoA ligase:carnitine CoA ligase
RA	37,432	G→A	29.8%	T211T (ACC→ACT)	caiA ←	crotonobetaine reductase subunit II, FAD‑binding
RA	38,629	A→G	32.7%	Y327Y (TAT→TAC)	caiT ←	predicted transporter
RA	39,361	C→T	34.1%	P83P (CCG→CCA)	caiT ←	predicted transporter
RA	39,415	A→G	23.7%	G65G (GGT→GGC)	caiT ←	predicted transporter
RA	39,505	T→C	29.2%	A35A (GCA→GCG)	caiT ←	predicted transporter
RA	39,812	A→T	43.0%	intergenic (‑203/‑269)	caiT ← / → fixA	predicted transporter/predicted electron transfer flavoprotein subunit, ETFP adenine nucleotide‑binding domain
RA	41,783	G→A	29.8%	A306A (GCG→GCA)	fixB →	predicted electron transfer flavoprotein, NAD/FAD‑binding domain and ETFP adenine nucleotide‑binding domain‑like
RA	42,478	G→C	33.7%	G207G (GGG→GGC)	fixC →	predicted oxidoreductase, FAD/NAD(P)‑binding domain
RA	42,766	C→T	37.2%	A303A (GCC→GCT)	fixC →	predicted oxidoreductase, FAD/NAD(P)‑binding domain
RA	43,706	T→C	25.5%	G74G (GGT→GGC)	yaaU →	predicted transporter
RA	43,712	T→C	24.6%	I76I (ATT→ATC)	yaaU →	predicted transporter
RA	44,126	C→A	32.3%	I214I (ATC→ATA)	yaaU →	predicted transporter
RA	45,539	A→T	46.1%	V31V (GTA→GTT)	kefC →	potassium:proton antiporter
RA	48,236	C→T	46.8%	S222N (AGC→AAC)	apaH ←	diadenosine tetraphosphatase
RA	49,231	A→G	44.8%	A18A (GCT→GCC)	apaG ←	protein associated with Co2+ and Mg2+ efflux
RA	49,644	T→C	40.2%	K155K (AAA→AAG)	ksgA ←	S‑adenosylmethionine‑6‑N',N'‑adenosyl (rRNA) dimethyltransferase
RA	50,330	A→G	50.4%	L255L (CTT→CTC)	pdxA ←	4‑hydroxy‑L‑threonine phosphate dehydrogenase, NAD‑dependent
RA	50,516	C→G	38.2%	R193R (CGG→CGC)	pdxA ←	4‑hydroxy‑L‑threonine phosphate dehydrogenase, NAD‑dependent
RA	51,307	A→G	36.5%	T358T (ACT→ACC)	surA ←	peptidyl‑prolyl cis‑trans isomerase
RA	51,445	A→G	33.3%	A312A (GCT→GCC)	surA ←	peptidyl‑prolyl cis‑trans isomerase
RA	53,522	G→A	24.6%	D422D (GAC→GAT)	imp ←	exported protein required for envelope biosynthesis and integrity
RA	53,750	C→T	35.9%	K346K (AAG→AAA)	imp ←	exported protein required for envelope biosynthesis and integrity
RA	53,762	A→G	36.2%	D342D (GAT→GAC)	imp ←	exported protein required for envelope biosynthesis and integrity
RA	53,789	C→T	26.2%	K333K (AAG→AAA)	imp ←	exported protein required for envelope biosynthesis and integrity
RA	54,086	C→T	30.8%	K234K (AAG→AAA)	imp ←	exported protein required for envelope biosynthesis and integrity
RA	57,596	C→T	82.3%	E143E (GAG→GAA)	rluA ←	pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)
RA	58,975	T→C	30.5%	S656S (TCA→TCG)	hepA ←	RNA polymerase‑associated helicase protein
RA	58,978	A→G	30.5%	A655A (GCT→GCC)	hepA ←	RNA polymerase‑associated helicase protein
RA	58,995	G→A	22.6%	L650L (CTG→TTG)	hepA ←	RNA polymerase‑associated helicase protein
RA	59,005	T→C	29.3%	V646V (GTA→GTG)	hepA ←	RNA polymerase‑associated helicase protein
RA	59,017	A→G	31.8%	I642I (ATT→ATC)	hepA ←	RNA polymerase‑associated helicase protein
RA	62,814	G→A	49.1%	Y215Y (TAC→TAT) ‡	polB ←	DNA polymerase II
RA	62,816	A→G	51.0%	Y215H (TAC→CAC) ‡	polB ←	DNA polymerase II
RA	62,817	G→A	50.9%	N214N (AAC→AAT) ‡	polB ←	DNA polymerase II
RA	62,818	T→G	55.1%	N214T (AAC→ACC) ‡	polB ←	DNA polymerase II
RA	62,820	G→C	58.7%	A213A (GCC→GCG)	polB ←	DNA polymerase II
RA	64,573	G→A	15.1%	I344I (ATC→ATT)	leuC ←	3‑isopropylmalate isomerase subunit, dehydratase component
RA	66,162	C→T	33.2%	A179A (GCG→GCA)	leuB ←	3‑isopropylmalate dehydrogenase
RA	66,174	G→A	52.3%	I175I (ATC→ATT)	leuB ←	3‑isopropylmalate dehydrogenase
RA	66,180	T→C	51.5%	E173E (GAA→GAG)	leuB ←	3‑isopropylmalate dehydrogenase
RA	67,358	C→T	27.0%	V304V (GTG→GTA)	leuA ←	2‑isopropylmalate synthase
RA	67,361	G→A	27.4%	G303G (GGC→GGT)	leuA ←	2‑isopropylmalate synthase
RA	67,373	T→G	36.6%	I299I (ATA→ATC)	leuA ←	2‑isopropylmalate synthase
RA	67,547	C→A	34.6%	L241L (CTG→CTT)	leuA ←	2‑isopropylmalate synthase
RA	67,673	G→A	39.2%	I199I (ATC→ATT)	leuA ←	2‑isopropylmalate synthase
RA	68,518	C→A	65.6%	intergenic (‑70/‑590)	leuL ← / → leuO	leu operon leader peptide/DNA‑binding transcriptional activator
RA	68,533	C→A	51.3%	intergenic (‑85/‑575)	leuL ← / → leuO	leu operon leader peptide/DNA‑binding transcriptional activator
RA	68,539	G→T	51.4%	intergenic (‑91/‑569)	leuL ← / → leuO	leu operon leader peptide/DNA‑binding transcriptional activator
RA	68,540	C→T	54.5%	intergenic (‑92/‑568)	leuL ← / → leuO	leu operon leader peptide/DNA‑binding transcriptional activator
RA	68,549	T→G	46.2%	intergenic (‑101/‑559)	leuL ← / → leuO	leu operon leader peptide/DNA‑binding transcriptional activator
RA	69,701	G→A	39.1%	K198K (AAG→AAA)	leuO →	DNA‑binding transcriptional activator
RA	69,716	A→G	33.9%	K203K (AAA→AAG)	leuO →	DNA‑binding transcriptional activator
RA	69,870	T→C	23.1%	L255L (TTG→CTG)	leuO →	DNA‑binding transcriptional activator
RA	71,761	C→T	38.3%	Y464Y (TAC→TAT)	ilvI →	acetolactate synthase III, large subunit
RA	72,264	A→G	20.1%	V56V (GTA→GTG)	ilvH →	acetolactate synthase III, thiamin‑dependent, small subunit
RA	72,273	G→A	20.8%	Q59Q (CAG→CAA)	ilvH →	acetolactate synthase III, thiamin‑dependent, small subunit
RA	72,887	T→A	55.0%	A40A (GCT→GCA)	fruR →	DNA‑binding transcriptional dual regulator
RA	72,890	G→A	54.9%	V41V (GTG→GTA)	fruR →	DNA‑binding transcriptional dual regulator
RA	75,688	C→T	23.8%	G285G (GGC→GGT)	mraW →	S‑adenosyl‑dependent methyltransferase activity on membrane‑located substrates
RA	75,694	A→G	16.8%	L287L (TTA→TTG)	mraW →	S‑adenosyl‑dependent methyltransferase activity on membrane‑located substrates
RA	76,644	G→A	47.2%	E164E (GAG→GAA)	ftsI →	transpeptidase involved in septal peptidoglycan synthesis
RA	76,656	C→T	39.8%	Y168Y (TAC→TAT)	ftsI →	transpeptidase involved in septal peptidoglycan synthesis
RA	76,662	G→A	45.7%	P170P (CCG→CCA)	ftsI →	transpeptidase involved in septal peptidoglycan synthesis
RA	76,677	T→C	50.0%	T175T (ACT→ACC)	ftsI →	transpeptidase involved in septal peptidoglycan synthesis
RA	78,700	T→C	28.0%	I265I (ATT→ATC)	murE →	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate:meso‑ diaminopimelate ligase
RA	78,739	A→C	37.9%	E278D (GAA→GAC)	murE →	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate:meso‑ diaminopimelate ligase
RA	79,533	T→C	54.9%	F48F (TTT→TTC)	murF →	UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase
RA	80,412	T→C	29.7%	T341T (ACT→ACC)	murF →	UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase
RA	80,415	A→C	35.2%	A342A (GCA→GCC)	murF →	UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase
RA	80,418	A→T	34.1%	A343A (GCA→GCT)	murF →	UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase
RA	80,421	C→T	27.5%	V344V (GTC→GTT)	murF →	UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase
RA	80,427	A→T	27.0%	V346V (GTA→GTT)	murF →	UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase
RA	81,158	C→G	35.3%	V139V (GTC→GTG)	mraY →	phospho‑N‑acetylmuramoyl‑pentapeptide transferase
RA	83,694	G→A	31.1%	V184V (GTG→GTA)	ftsW →	integral membrane protein involved in stabilising FstZ ring during cell division
RA	83,853	A→C	48.2%	I237I (ATA→ATC)	ftsW →	integral membrane protein involved in stabilising FstZ ring during cell division
RA	83,944	C→T	49.5%	L268L (CTG→TTG)	ftsW →	integral membrane protein involved in stabilising FstZ ring during cell division
RA	83,964	C→T	56.4%	G274G (GGC→GGT)	ftsW →	integral membrane protein involved in stabilising FstZ ring during cell division
RA	83,970	T→G	54.3%	L276L (CTT→CTG)	ftsW →	integral membrane protein involved in stabilising FstZ ring during cell division
RA	83,976	G→A	53.8%	G278G (GGG→GGA)	ftsW →	integral membrane protein involved in stabilising FstZ ring during cell division
RA	85,795	C→A	36.8%	A97A (GCC→GCA)	murC →	UDP‑N‑acetylmuramate:L‑alanine ligase
RA	85,885	G→A	41.3%	T127T (ACG→ACA)	murC →	UDP‑N‑acetylmuramate:L‑alanine ligase
RA	87,227	A→C	45.4%	G85G (GGA→GGC)	ddlB →	D‑Alanine:D‑alanine ligase
RA	87,241	C→T	49.3%	A90V (GCA→GTA)	ddlB →	D‑Alanine:D‑alanine ligase
RA	87,815	C→T	39.7%	S281S (AGC→AGT)	ddlB →	D‑Alanine:D‑alanine ligase
RA	87,821	G→A	36.7%	V283V (GTG→GTA)	ddlB →	D‑Alanine:D‑alanine ligase
RA	88,344	A→T	38.2%	E150D (GAA→GAT)	ftsQ →	membrane anchored protein involved in growth of wall at septum
RA	89,165	A→G	14.1%	G148G (GGA→GGG)	ftsA →	ATP‑binding cell division protein involved in recruitment of FtsK to Z ring
RA	90,611	G→A	41.6%	L189L (CTG→CTA)	ftsZ →	GTP‑binding tubulin‑like cell division protein
RA	90,635	T→C	36.3%	A197A (GCT→GCC)	ftsZ →	GTP‑binding tubulin‑like cell division protein
RA	90,917	T→C	57.0%	T291T (ACT→ACC)	ftsZ →	GTP‑binding tubulin‑like cell division protein
RA	92,124	G→T	39.4%	L276L (CTG→CTT)	lpxC →	UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase
RA	92,127	G→A	39.3%	A277A (GCG→GCA)	lpxC →	UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase
RA	92,349	C→A	74.1%	intergenic (+135/‑96)	lpxC → / → secM	UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase/regulator of secA translation
RA	92,382	G→T	61.8%	intergenic (+168/‑63)	lpxC → / → secM	UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase/regulator of secA translation
RA	92,519	T→C	37.9%	V25V (GTT→GTC)	secM →	regulator of secA translation
RA	93,174	A→G	38.7%	A52A (GCA→GCG)	secA →	preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA	93,594	G→A	39.9%	A192A (GCG→GCA)	secA →	preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA	93,618	G→A	43.5%	Q200Q (CAG→CAA)	secA →	preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA	93,879	G→T	100%	V287V (GTG→GTT)	secA →	preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA	93,885	G→A	100%	E289E (GAG→GAA)	secA →	preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA	95,017	T→C	8.3%	L667L (TTG→CTG)	secA →	preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA	95,901	A→G	20.5%	I40V (ATT→GTT)	mutT →	nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP
RA	95,912	T→C	19.3%	G43G (GGT→GGC)	mutT →	nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP
RA	96,401	T→C	19.3%	E62E (GAA→GAG)	yacG ←	conserved hypothetical protein
RA	96,629	C→T	100%	P237P (CCG→CCA)	yacF ←	conserved hypothetical protein
RA	96,648	G→C	100%	T231S (ACT→AGT)	yacF ←	conserved hypothetical protein
RA	98,996	C→A	45.5%	S271S (TCC→TCA)	guaC →	GMP reductase
RA	99,394	C→T	49.5%	A357A (GCG→GCA)	hofC ←	assembly protein in type IV pilin biogenesis, transmembrane protein
RA	99,507	T→C	39.2%	T320A (ACC→GCC)	hofC ←	assembly protein in type IV pilin biogenesis, transmembrane protein
RA	99,532	T→G	51.7%	Q311H (CAA→CAC)	hofC ←	assembly protein in type IV pilin biogenesis, transmembrane protein
RA	99,964	G→A	50.3%	I167I (ATC→ATT)	hofC ←	assembly protein in type IV pilin biogenesis, transmembrane protein
RA	100,916	A→G	44.6%	T308T (ACT→ACC)	hofB ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	100,925	C→G	55.8%	A305A (GCG→GCC)	hofB ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	101,323	G→C	57.4%	P173A (CCA→GCA)	hofB ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	102,699	T→A	60.7%	G229G (GGA→GGT)	nadC ←	quinolinate phosphoribosyltransferase
RA	102,711	G→A	65.0%	A225A (GCC→GCT)	nadC ←	quinolinate phosphoribosyltransferase
RA	103,122	T→A	43.2%	I88I (ATA→ATT)	nadC ←	quinolinate phosphoribosyltransferase
RA	103,899	T→C	51.3%	C143R (TGC→CGC)	ampD →	N‑acetyl‑anhydromuranmyl‑L‑alanine amidase
RA	103,907	G→A	50.0%	P145P (CCG→CCA)	ampD →	N‑acetyl‑anhydromuranmyl‑L‑alanine amidase
RA	103,919	A→T	52.5%	K149N (AAA→AAT)	ampD →	N‑acetyl‑anhydromuranmyl‑L‑alanine amidase
RA	104,233	A→G	34.6%	L71L (CTA→CTG)	ampE →	predicted inner membrane protein
RA	104,845	A→G	73.7%	A275A (GCA→GCG)	ampE →	predicted inner membrane protein
RA	104,896	T→C	58.1%	intergenic (+21/+22)	ampE → / ← aroP	predicted inner membrane protein/aromatic amino acid transporter
RA	105,125	C→T	26.9%	Q389Q (CAG→CAA)	aroP ←	aromatic amino acid transporter
RA	105,128	C→T	25.5%	K388K (AAG→AAA)	aroP ←	aromatic amino acid transporter
RA	105,158	G→A	40.7%	S378S (AGC→AGT)	aroP ←	aromatic amino acid transporter
RA	105,440	C→T	40.7%	V284V (GTG→GTA)	aroP ←	aromatic amino acid transporter
RA	105,854	A→T	51.0%	V146V (GTT→GTA)	aroP ←	aromatic amino acid transporter
RA	105,914	G→T	45.9%	P126P (CCC→CCA)	aroP ←	aromatic amino acid transporter
RA	106,094	C→T	72.7%	L66L (CTG→CTA)	aroP ←	aromatic amino acid transporter
RA	106,166	C→T	31.2%	Q42Q (CAG→CAA)	aroP ←	aromatic amino acid transporter
RA	107,365	C→T	31.5%	A178A (GCC→GCT)	pdhR →	DNA‑binding transcriptional dual regulator
RA	108,722	C→T	22.2%	D322D (GAC→GAT)	aceE →	pyruvate dehydrogenase, decarboxylase component E1, thiamin‑binding
RA	108,755	C→T	48.0%	Y333Y (TAC→TAT)	aceE →	pyruvate dehydrogenase, decarboxylase component E1, thiamin‑binding
RA	108,761	T→C	42.6%	R335R (CGT→CGC)	aceE →	pyruvate dehydrogenase, decarboxylase component E1, thiamin‑binding
RA	108,941	C→T	42.8%	Y395Y (TAC→TAT)	aceE →	pyruvate dehydrogenase, decarboxylase component E1, thiamin‑binding
RA	109,697	C→T	57.7%	H647H (CAC→CAT)	aceE →	pyruvate dehydrogenase, decarboxylase component E1, thiamin‑binding
RA	109,946	C→G	44.5%	L730L (CTC→CTG)	aceE →	pyruvate dehydrogenase, decarboxylase component E1, thiamin‑binding
RA	110,572	T→A	57.8%	V46V (GTT→GTA)	aceF →	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2
RA	110,575	G→A	55.3%	P47P (CCG→CCA)	aceF →	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2
RA	111,038	C→T	35.8%	P202S (CCA→TCA)	aceF →	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2
RA	111,412	T→C	67.5%	Y326Y (TAT→TAC)	aceF →	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2
RA	112,771	C→T	49.4%	T40T (ACC→ACT)	lpd →	lipoamide dehydrogenase, E3 component is part of three enzyme complexes
RA	113,344	C→T	18.6%	N231N (AAC→AAT)	lpd →	lipoamide dehydrogenase, E3 component is part of three enzyme complexes
RA	113,602	A→G	24.9%	Q317Q (CAA→CAG)	lpd →	lipoamide dehydrogenase, E3 component is part of three enzyme complexes
RA	115,012	C→T	25.0%	G330D (GGC→GAC)	yacH ←	hypothetical protein
RA	115,740	C→T	37.4%	L87L (CTG→CTA)	yacH ←	hypothetical protein
RA	115,749	G→A	39.9%	P84P (CCC→CCT)	yacH ←	hypothetical protein
RA	115,752	C→T	39.9%	A83A (GCG→GCA)	yacH ←	hypothetical protein
RA	115,755	G→A	39.9%	V82V (GTC→GTT)	yacH ←	hypothetical protein
RA	115,773	T→A	41.0%	A76A (GCA→GCT)	yacH ←	hypothetical protein
RA	117,272	G→A	66.5%	V306V (GTG→GTA)	acnB →	bifunctional aconitate hydratase 2 and 2‑methylisocitrate dehydratase
RA	117,332	G→A	51.8%	A326A (GCG→GCA)	acnB →	bifunctional aconitate hydratase 2 and 2‑methylisocitrate dehydratase
RA	119,257	C→G	40.8%	Q44E (CAA→GAA) ‡	yacL →	conserved hypothetical protein
RA	119,259	A→C	40.9%	Q44H (CAA→CAC) ‡	yacL →	conserved hypothetical protein
RA	119,267	A→G	39.2%	H47R (CAC→CGC)	yacL →	conserved hypothetical protein
RA	119,269	G→A	39.1%	A48T (GCA→ACA) ‡	yacL →	conserved hypothetical protein
RA	119,271	A→G	39.2%	A48A (GCA→GCG) ‡	yacL →	conserved hypothetical protein
RA	119,274	G→C	34.9%	L49L (CTG→CTC)	yacL →	conserved hypothetical protein
RA	119,280	T→C	29.6%	G51G (GGT→GGC)	yacL →	conserved hypothetical protein
RA	119,289	G→A	27.8%	R54R (CGG→CGA)	yacL →	conserved hypothetical protein
RA	119,298	A→G	31.1%	Q57Q (CAA→CAG)	yacL →	conserved hypothetical protein
RA	121,082	A→G	21.0%	A41A (GCT→GCC)	speE ←	spermidine synthase
RA	122,068	C→T	22.9%	R82R (CGC→CGT)	cueO →	multicopper oxidase (laccase)
RA	122,440	C→T	24.0%	A206A (GCC→GCT)	cueO →	multicopper oxidase (laccase)
RA	122,446	C→T	23.1%	G208G (GGC→GGT)	cueO →	multicopper oxidase (laccase)
RA	123,017	G→A	68.0%	G399S (GGC→AGC)	cueO →	multicopper oxidase (laccase)
RA	124,043	A→G	39.1%	I641I (ATT→ATC)	gcd ←	glucose dehydrogenase
RA	125,135	G→A	32.3%	T277T (ACC→ACT)	gcd ←	glucose dehydrogenase
RA	125,165	A→G	41.5%	G267G (GGT→GGC)	gcd ←	glucose dehydrogenase
RA	125,180	G→A	33.2%	H262H (CAC→CAT)	gcd ←	glucose dehydrogenase
RA	125,387	A→C	26.5%	N193K (AAT→AAG)	gcd ←	glucose dehydrogenase
RA	125,390	A→G	27.6%	H192H (CAT→CAC)	gcd ←	glucose dehydrogenase
RA	125,402	G→A	53.5%	A188A (GCC→GCT)	gcd ←	glucose dehydrogenase
RA	125,414	T→C	47.7%	K184K (AAA→AAG)	gcd ←	glucose dehydrogenase
RA	125,420	C→T	51.0%	P182P (CCG→CCA)	gcd ←	glucose dehydrogenase
RA	125,423	C→T	51.0%	S181S (TCG→TCA)	gcd ←	glucose dehydrogenase
RA	125,447	A→G	46.4%	R173R (CGT→CGC)	gcd ←	glucose dehydrogenase
RA	125,477	T→A	24.9%	V163V (GTA→GTT)	gcd ←	glucose dehydrogenase
RA	125,489	A→G	36.9%	A159A (GCT→GCC)	gcd ←	glucose dehydrogenase
RA	125,495	A→T	36.9%	A157A (GCT→GCA)	gcd ←	glucose dehydrogenase
RA	125,498	A→T	36.9%	P156P (CCT→CCA)	gcd ←	glucose dehydrogenase
RA	128,158	C→T	20.1%	L214L (CTG→TTG)	yadG →	predicted transporter subunit
RA	128,172	C→T	19.6%	T218T (ACC→ACT)	yadG →	predicted transporter subunit
RA	129,773	G→A	56.3%	intergenic (+16/‑48)	yadI → / → yadE	predicted PTS Enzyme IIA/predicted polysaccharide deacetylase lipoprotein
RA	130,273	T→C	37.0%	R151R (CGT→CGC)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,303	A→G	36.9%	A161A (GCA→GCG)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,402	A→C	21.2%	T194T (ACA→ACC)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,742	G→A	52.9%	V308I (GTA→ATA)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,756	C→G	53.3%	R312R (CGC→CGG)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,759	A→G	58.9%	R313R (CGA→CGG)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,762	C→T	59.7%	P314P (CCC→CCT)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,768	A→G	50.0%	L316L (TTA→TTG)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,885	C→A	19.5%	N355K (AAC→AAA)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,903	C→A	20.5%	N361K (AAC→AAA)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	130,906	T→A	22.2%	D362E (GAT→GAA)	yadE →	predicted polysaccharide deacetylase lipoprotein
RA	131,549	G→A	39.1%	intergenic (‑115/‑159)	panD ← / → yadD	aspartate 1‑decarboxylase/predicted transposase
RA	131,550	T→G	39.2%	intergenic (‑116/‑158)	panD ← / → yadD	aspartate 1‑decarboxylase/predicted transposase
RA	131,770	G→A	27.3%	E21E (GAG→GAA)	yadD →	predicted transposase
RA	131,899	C→T	20.7%	L64L (CTC→CTT)	yadD →	predicted transposase
RA	133,652	A→G	15.3%	A230A (GCT→GCC)	panB ←	3‑methyl‑2‑oxobutanoate hydroxymethyltransferase
RA	133,667	G→A	22.8%	H225H (CAC→CAT)	panB ←	3‑methyl‑2‑oxobutanoate hydroxymethyltransferase
RA	137,451	G→C	24.2%	V34V (GTC→GTG)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,454	A→G	22.3%	T33T (ACT→ACC)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,457	G→A	22.3%	A32A (GCC→GCT)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,460	T→G	20.1%	T31T (ACA→ACC)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,466	C→A	20.5%	E29D (GAG→GAT)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,469	T→G	20.5%	V28V (GTA→GTC)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,477	T→C	20.7%	I26V (ATT→GTT)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,493	T→C	22.5%	S20S (TCA→TCG)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,496	G→A	22.5%	P19P (CCC→CCT)	yadM ←	predicted fimbrial‑like adhesin protein
RA	137,499	T→C	20.9%	S18S (TCA→TCG)	yadM ←	predicted fimbrial‑like adhesin protein
RA	139,690	T→C	19.0%	K159K (AAA→AAG)	htrE ←	predicted outer membrane usher protein
RA	139,696	T→A	19.0%	V157V (GTA→GTT) ‡	htrE ←	predicted outer membrane usher protein
RA	139,698	C→T	17.6%	V157I (GTA→ATA) ‡	htrE ←	predicted outer membrane usher protein
RA	139,702	G→T	17.8%	A155A (GCC→GCA)	htrE ←	predicted outer membrane usher protein
RA	139,705	T→C	16.7%	Q154Q (CAA→CAG)	htrE ←	predicted outer membrane usher protein
RA	139,708	A→G	16.3%	P153P (CCT→CCC)	htrE ←	predicted outer membrane usher protein
RA	139,711	A→G	19.5%	V152V (GTT→GTC)	htrE ←	predicted outer membrane usher protein
RA	139,714	G→A	22.0%	D151D (GAC→GAT)	htrE ←	predicted outer membrane usher protein
RA	139,717	T→G	22.7%	I150I (ATA→ATC)	htrE ←	predicted outer membrane usher protein
RA	139,726	A→G	20.8%	R147R (CGT→CGC)	htrE ←	predicted outer membrane usher protein
RA	139,741	G→A	31.8%	D142D (GAC→GAT)	htrE ←	predicted outer membrane usher protein
RA	139,744	A→G	29.8%	Y141Y (TAT→TAC)	htrE ←	predicted outer membrane usher protein
RA	141,287	A→G	53.2%	L113L (TTG→CTG)	yadN ←	predicted fimbrial‑like adhesin protein
RA	141,288	A→T	53.1%	T112T (ACT→ACA)	yadN ←	predicted fimbrial‑like adhesin protein
RA	141,291	C→T	53.1%	G111G (GGG→GGA)	yadN ←	predicted fimbrial‑like adhesin protein
RA	141,333	A→T	35.8%	A97A (GCT→GCA)	yadN ←	predicted fimbrial‑like adhesin protein
RA	147,876	C→T	29.6%	A344A (GCC→GCT)	hrpB →	predicted ATP‑dependent helicase
RA	147,879	G→C	29.7%	A345A (GCG→GCC)	hrpB →	predicted ATP‑dependent helicase
RA	148,890	C→T	41.6%	D682D (GAC→GAT)	hrpB →	predicted ATP‑dependent helicase
RA	148,905	A→G	53.3%	L687L (CTA→CTG)	hrpB →	predicted ATP‑dependent helicase
RA	148,908	C→T	45.2%	R688R (CGC→CGT)	hrpB →	predicted ATP‑dependent helicase
RA	148,925	G→T	58.9%	G694V (GGA→GTA)	hrpB →	predicted ATP‑dependent helicase
RA	150,912	T→C	100%	S481S (AGT→AGC)	mrcB →	fused glycosyl transferase and transpeptidase
RA	152,487	G→A	52.9%	H407H (CAC→CAT)	hemL ←	glutamate‑1‑semialdehyde aminotransferase
RA	154,867	G→T	57.1%	T312T (ACG→ACT)	clcA →	chloride channel, voltage‑gated
RA	157,237	T→C	52.9%	P17P (CCA→CCG)	btuF ←	vitamin B12 transporter subunit
RA	157,243	A→G	55.3%	L15L (CTT→CTC)	btuF ←	vitamin B12 transporter subunit
RA	157,729	A→G	34.2%	L84L (TTG→CTG)	pfs ←	5'‑methylthioadenosine/S‑adenosylhomocysteine nucleosidase
RA	160,299	T→C	31.1%	F197F (TTT→TTC)	degP →	serine endoprotease (protease Do), membrane‑associated
RA	160,302	T→C	31.1%	G198G (GGT→GGC)	degP →	serine endoprotease (protease Do), membrane‑associated
RA	160,737	G→A	43.8%	P343P (CCG→CCA)	degP →	serine endoprotease (protease Do), membrane‑associated
RA	160,821	T→G	47.1%	G371G (GGT→GGG)	degP →	serine endoprotease (protease Do), membrane‑associated
RA	160,882	T→A	24.1%	S392T (TCC→ACC)	degP →	serine endoprotease (protease Do), membrane‑associated
RA	161,135	C→T	21.1%	intergenic (+2/‑153)	degP → / → cdaR	serine endoprotease (protease Do), membrane‑associated/DNA‑binding transcriptional regulator
RA	161,956	T→C	46.7%	D223D (GAT→GAC)	cdaR →	DNA‑binding transcriptional regulator
RA	162,223	G→A	45.2%	A312A (GCG→GCA)	cdaR →	DNA‑binding transcriptional regulator
RA	162,233	A→G	48.7%	T316A (ACG→GCG)	cdaR →	DNA‑binding transcriptional regulator
RA	165,064	T→C	37.9%	V804V (GTA→GTG)	glnD ←	uridylyltransferase
RA	165,472	A→G	43.4%	R668R (CGT→CGC)	glnD ←	uridylyltransferase
RA	165,784	T→C	100%	Q564Q (CAA→CAG)	glnD ←	uridylyltransferase
RA	165,787	G→A	100%	A563A (GCC→GCT)	glnD ←	uridylyltransferase
RA	165,804	A→G	100%	L558L (TTG→CTG)	glnD ←	uridylyltransferase
RA	166,699	C→T	67.3%	R259R (CGG→CGA)	glnD ←	uridylyltransferase
RA	171,738	C→T	58.5%	D14D (GAC→GAT)	frr →	ribosome recycling factor
RA	171,888	A→T	32.0%	T64T (ACA→ACT)	frr →	ribosome recycling factor
RA	172,545	C→T	64.3%	T67M (ACG→ATG)	dxr →	1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase
RA	172,564	T→G	42.9%	G73G (GGT→GGG)	dxr →	1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase
RA	177,973	T→G	28.1%	G407G (GGT→GGG)	yaeT →	conserved hypothetical protein
RA	177,982	C→T	29.3%	D410D (GAC→GAT)	yaeT →	conserved hypothetical protein
RA	178,645	G→T	23.7%	G631G (GGG→GGT)	yaeT →	conserved hypothetical protein
RA	180,434	A→T	43.8%	T213T (ACA→ACT)	lpxD →	UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase
RA	180,440	C→T	50.0%	I215I (ATC→ATT)	lpxD →	UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase
RA	180,446	C→T	50.0%	R217R (CGC→CGT)	lpxD →	UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase
RA	182,379	C→A	44.4%	L69L (CTC→CTA)	lpxB →	tetraacyldisaccharide‑1‑P synthase
RA	183,076	T→C	45.4%	L302L (TTG→CTG)	lpxB →	tetraacyldisaccharide‑1‑P synthase
RA	183,087	G→A	54.0%	R305R (CGG→CGA)	lpxB →	tetraacyldisaccharide‑1‑P synthase
RA	186,734	C→A	34.6%	A928A (GCC→GCA)	dnaE →	DNA polymerase III alpha subunit
RA	188,635	A→G	31.1%	K44K (AAA→AAG)	ldcC →	lysine decarboxylase 2, constitutive
RA	188,890	A→G	36.7%	T129T (ACA→ACG)	ldcC →	lysine decarboxylase 2, constitutive
RA	189,526	G→A	27.6%	P341P (CCG→CCA)	ldcC →	lysine decarboxylase 2, constitutive
RA	189,568	G→A	24.8%	A355A (GCG→GCA)	ldcC →	lysine decarboxylase 2, constitutive
RA	189,592	A→G	40.8%	Q363Q (CAA→CAG)	ldcC →	lysine decarboxylase 2, constitutive
RA	189,628	T→G	42.8%	A375A (GCT→GCG)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,053	T→A	53.0%	F517Y (TTC→TAC)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,065	G→A	57.7%	R521H (CGT→CAT)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,069	G→C	59.2%	G522G (GGG→GGC)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,075	A→T	58.5%	V524V (GTA→GTT)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,078	A→T	60.0%	V525V (GTA→GTT)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,090	C→T	53.6%	G529G (GGC→GGT)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,093	T→G	53.7%	P530P (CCT→CCG)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,108	T→C	80.6%	F535F (TTT→TTC)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,111	C→G	80.5%	L536L (CTC→CTG)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,114	T→C	62.6%	F537F (TTT→TTC)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,273	A→G	34.9%	A590A (GCA→GCG)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,333	C→T	29.4%	F610F (TTC→TTT)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,339	T→C	30.1%	T612T (ACT→ACC)	ldcC →	lysine decarboxylase 2, constitutive
RA	190,756	G→A	49.5%	V19M (GTG→ATG)	yaeR →	predicted lyase
RA	190,956	C→T	49.1%	D85D (GAC→GAT)	yaeR →	predicted lyase
RA	193,541	A→G	28.0%	V142V (GTA→GTG)	yaeQ →	conserved hypothetical protein
RA	193,546	C→G	27.6%	A144G (GCC→GGC)	yaeQ →	conserved hypothetical protein
RA	195,472	C→G	45.6%	A119A (GCG→GCC)	yaeF ←	predicted lipoprotein
RA	195,490	G→A	35.5%	I113I (ATC→ATT)	yaeF ←	predicted lipoprotein
RA	195,640	A→T	25.0%	P63P (CCT→CCA)	yaeF ←	predicted lipoprotein
RA	195,644	G→T	24.9%	A62E (GCA→GAA)	yaeF ←	predicted lipoprotein
RA	196,212	T→G	52.4%	R463R (CGA→CGC)	proS ←	prolyl‑tRNA synthetase
RA	196,437	A→G	42.3%	R388R (CGT→CGC)	proS ←	prolyl‑tRNA synthetase
RA	196,446	T→A	39.4%	A385A (GCA→GCT)	proS ←	prolyl‑tRNA synthetase
RA	196,451	C→T	37.9%	V384I (GTT→ATT)	proS ←	prolyl‑tRNA synthetase
RA	196,458	G→A	38.0%	T381T (ACC→ACT)	proS ←	prolyl‑tRNA synthetase
RA	197,160	G→A	34.9%	F147F (TTC→TTT)	proS ←	prolyl‑tRNA synthetase
RA	197,331	A→G	58.1%	G90G (GGT→GGC)	proS ←	prolyl‑tRNA synthetase
RA	197,334	G→A	58.1%	Y89Y (TAC→TAT)	proS ←	prolyl‑tRNA synthetase
RA	197,366	A→G	52.3%	L79L (TTG→CTG)	proS ←	prolyl‑tRNA synthetase
RA	197,367	A→T	52.3%	D78E (GAT→GAA)	proS ←	prolyl‑tRNA synthetase
RA	197,370	G→A	52.9%	A77A (GCC→GCT)	proS ←	prolyl‑tRNA synthetase
RA	197,781	T→C	31.4%	L213L (CTA→CTG)	yaeB ←	conserved hypothetical protein
RA	198,312	C→T	100%	L36L (CTG→CTA)	yaeB ←	conserved hypothetical protein
RA	200,183	A→T	25.6%	G88G (GGT→GGA)	metI ←	DL‑methionine transporter subunit
RA	201,711	C→T	32.0%	V18V (GTC→GTT)	gmhB →	D,D‑heptose 1,7‑bisphosphate phosphatase
RA	201,981	T→C	29.3%	D108D (GAT→GAC)	gmhB →	D,D‑heptose 1,7‑bisphosphate phosphatase
RA	204,556	A→G	100%	intergenic (+156/‑28)	alaV → / → rrlH	tRNA‑Ala/23S ribosomal RNA
RA	208,530	G→T	29.3%	T180T (ACG→ACT)	dkgB →	2,5‑diketo‑D‑gluconate reductase B
RA	208,542	T→C	28.5%	G184G (GGT→GGC)	dkgB →	2,5‑diketo‑D‑gluconate reductase B
RA	208,545	G→T	27.9%	K185N (AAG→AAT)	dkgB →	2,5‑diketo‑D‑gluconate reductase B
RA	208,548	C→A	28.0%	A186A (GCC→GCA)	dkgB →	2,5‑diketo‑D‑gluconate reductase B
RA	208,558	G→A	31.8%	E190K (GAG→AAG)	dkgB →	2,5‑diketo‑D‑gluconate reductase B
RA	208,575	C→T	33.8%	I195I (ATC→ATT)	dkgB →	2,5‑diketo‑D‑gluconate reductase B
RA	208,602	A→T	27.1%	A204A (GCA→GCT)	dkgB →	2,5‑diketo‑D‑gluconate reductase B
RA	209,334	C→T	39.9%	L124L (TTG→TTA)	yafC ←	predicted DNA‑binding transcriptional regulator
RA	209,361	G→A	39.3%	F115F (TTC→TTT)	yafC ←	predicted DNA‑binding transcriptional regulator
RA	209,373	T→C	50.7%	L111L (TTA→TTG)	yafC ←	predicted DNA‑binding transcriptional regulator
RA	210,374	A→C	45.9%	P143P (CCA→CCC)	yafD →	conserved hypothetical protein
RA	210,386	C→T	31.3%	T147T (ACC→ACT)	yafD →	conserved hypothetical protein
RA	212,234	T→C	59.6%	K182K (AAA→AAG)	mltD ←	predicted membrane‑bound lytic murein transglycosylase D
RA	213,286	C→T	37.6%	T107T (ACG→ACA)	gloB ←	predicted hydroxyacylglutathione hydrolase
RA	213,289	A→G	37.7%	A106A (GCT→GCC)	gloB ←	predicted hydroxyacylglutathione hydrolase
RA	213,333	C→T	29.6%	G92S (GGC→AGC)	gloB ←	predicted hydroxyacylglutathione hydrolase
RA	214,077	C→A	27.0%	T146T (ACC→ACA)	yafS →	predicted S‑adenosyl‑L‑methionine‑dependent methyltransferase
RA	214,101	T→C	23.5%	F154F (TTT→TTC)	yafS →	predicted S‑adenosyl‑L‑methionine‑dependent methyltransferase
RA	214,925	A→C	91.5%	D12A (GAT→GCT)	dnaQ →	DNA polymerase III epsilon subunit
RA	214,931	A→C	92.2%	E14A (GAA→GCA)	dnaQ →	DNA polymerase III epsilon subunit
RA	218,450	C→T	26.4%	V188V (GTG→GTA)	yafV ←	predicted C‑N hydrolase family amidase, NAD(P)‑binding
RA	218,458	C→T	25.3%	A186T (GCG→ACG)	yafV ←	predicted C‑N hydrolase family amidase, NAD(P)‑binding
RA	219,917	T→C	64.6%	P737P (CCA→CCG)	fadE ←	acyl coenzyme A dehydrogenase
RA	220,157	A→G	41.8%	D657D (GAT→GAC)	fadE ←	acyl coenzyme A dehydrogenase
RA	221,894	C→T	34.9%	K78K (AAG→AAA)	fadE ←	acyl coenzyme A dehydrogenase
RA	221,897	A→G	48.3%	R77R (CGT→CGC)	fadE ←	acyl coenzyme A dehydrogenase
RA	221,903	A→T	42.9%	G75G (GGT→GGA)	fadE ←	acyl coenzyme A dehydrogenase
RA	222,888	T→C	26.8%	I174I (ATT→ATC)	lpcA →	D‑sedoheptulose 7‑phosphate isomerase
RA	222,921	G→A	30.8%	L185L (TTG→TTA)	lpcA →	D‑sedoheptulose 7‑phosphate isomerase
RA	223,577	A→G	50.7%	G151G (GGA→GGG)	prfH →	predicted peptide chain release factor
RA	223,627	T→A	29.4%	intergenic (+47/+10)	prfH → / ← pepD	predicted peptide chain release factor/aminoacyl‑histidine dipeptidase
RA	223,739	A→G	40.0%	T452T (ACT→ACC)	pepD ←	aminoacyl‑histidine dipeptidase
RA	223,754	A→C	50.9%	V447V (GTT→GTG)	pepD ←	aminoacyl‑histidine dipeptidase
RA	223,934	G→A	60.7%	G387G (GGC→GGT)	pepD ←	aminoacyl‑histidine dipeptidase
RA	223,937	A→T	60.8%	A386A (GCT→GCA)	pepD ←	aminoacyl‑histidine dipeptidase
RA	223,952	C→T	61.9%	S381S (TCG→TCA)	pepD ←	aminoacyl‑histidine dipeptidase
RA	224,069	A→G	52.3%	V342V (GTT→GTC)	pepD ←	aminoacyl‑histidine dipeptidase
RA	224,081	G→T	44.2%	A338A (GCC→GCA)	pepD ←	aminoacyl‑histidine dipeptidase
RA	224,084	T→C	43.5%	V337V (GTA→GTG)	pepD ←	aminoacyl‑histidine dipeptidase
RA	224,087	A→G	44.3%	D336D (GAT→GAC)	pepD ←	aminoacyl‑histidine dipeptidase
RA	224,636	G→A	20.4%	F153F (TTC→TTT)	pepD ←	aminoacyl‑histidine dipeptidase
RA	224,639	C→A	20.4%	A152A (GCG→GCT)	pepD ←	aminoacyl‑histidine dipeptidase
RA	226,492	G→A	45.4%	T196T (ACG→ACA)	frsA →	hydrolase, binds to enzyme IIA(Glc)
RA	227,362	A→G	42.0%	E52E (GAA→GAG)	crl →	DNA‑binding transcriptional regulator
RA	227,492	C→T	24.8%	L96L (CTG→TTG)	crl →	DNA‑binding transcriptional regulator
RA	227,533	A→G	13.5%	E109E (GAA→GAG)	crl →	DNA‑binding transcriptional regulator
RA	227,540	A→G	18.7%	T112A (ACG→GCG)	crl →	DNA‑binding transcriptional regulator
RA	227,569	G→A	24.4%	A121A (GCG→GCA)	crl →	DNA‑binding transcriptional regulator
RA	229,412	G→T	48.3%	T141T (ACG→ACT)	proB →	gamma‑glutamate kinase
RA	229,430	C→T	72.5%	G147G (GGC→GGT)	proB →	gamma‑glutamate kinase
RA	229,931	C→T	32.6%	R314R (CGC→CGT)	proB →	gamma‑glutamate kinase
RA	230,518	T→C	40.3%	N138N (AAT→AAC)	proA →	gamma‑glutamylphosphate reductase
RA	231,703:1	+C	100%	intergenic (+155/+84)	thrW → / ← hemB	tRNA‑Thr/porphobilinogen synthase
RA	231,934	A→G	50.0%	Y276Y (TAT→TAC)	hemB ←	porphobilinogen synthase
RA	232,063	T→C	74.7%	S233S (TCA→TCG)	hemB ←	porphobilinogen synthase
RA	232,066	T→C	76.4%	E232E (GAA→GAG)	hemB ←	porphobilinogen synthase
RA	236,687	A→G	13.2%	S14S (TCA→TCG)	yaiE →	conserved hypothetical protein
RA	237,233	T→G	40.8%	D32E (GAT→GAG)	ykiA →	hypothetical protein
RA	240,000	G→A	39.0%	N317N (AAC→AAT)	araJ ←	predicted transporter
RA	240,006	T→C	100%	L315L (CTA→CTG)	araJ ←	predicted transporter
RA	240,219	A→C	13.6%	V244V (GTT→GTG)	araJ ←	predicted transporter
RA	240,243	C→T	11.7%	A236A (GCG→GCA)	araJ ←	predicted transporter
RA	241,084	C→T	42.5%	V1047M (GTG→ATG)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	241,093	T→C	38.1%	T1044A (ACG→GCG)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	241,118	G→T	38.1%	G1035G (GGC→GGA)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	241,121	G→A	37.6%	N1034N (AAC→AAT)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	241,259	C→T	55.3%	T988T (ACG→ACA)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	241,319	C→T	78.4%	S968S (TCG→TCA)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	241,331	C→T	62.5%	A964A (GCG→GCA)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	241,346	A→G	47.6%	V959V (GTT→GTC)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	241,523	C→T	61.6%	Q900Q (CAG→CAA)	sbcC ←	exonuclease, dsDNA, ATP‑dependent
RA	244,761	C→T	30.1%	G221R (GGG→AGG)	sbcD ←	exonuclease, dsDNA, ATP‑dependent
RA	244,855	C→A	13.5%	G189G (GGG→GGT)	sbcD ←	exonuclease, dsDNA, ATP‑dependent
RA	244,876	C→A	41.7%	T182T (ACG→ACT)	sbcD ←	exonuclease, dsDNA, ATP‑dependent
RA	247,122	A→G	38.6%	G255G (GGA→GGG)	phoR →	sensory histidine kinase in two‑component regulatory system with PhoB
RA	247,123	C→T	38.5%	L256L (CTG→TTG)	phoR →	sensory histidine kinase in two‑component regulatory system with PhoB
RA	247,548	T→G	23.4%	A397A (GCT→GCG)	phoR →	sensory histidine kinase in two‑component regulatory system with PhoB
RA	247,851	C→T	16.2%	intergenic (+198/‑209)	phoR → / → brnQ	sensory histidine kinase in two‑component regulatory system with PhoB/predicted branched chain amino acid transporter
RA	249,667	C→A	37.7%	A71A (GCC→GCA)	proY →	predicted cryptic proline transporter
RA	250,357	T→C	21.0%	D301D (GAT→GAC)	proY →	predicted cryptic proline transporter
RA	250,366	C→T	23.7%	G304G (GGC→GGT)	proY →	predicted cryptic proline transporter
RA	252,556	A→G	36.9%	S525G (AGT→GGT)	malZ →	maltodextrin glucosidase
RA	252,565	C→T	60.2%	L528L (CTA→TTA) ‡	malZ →	maltodextrin glucosidase
RA	252,567	A→G	59.1%	L528L (CTA→CTG) ‡	malZ →	maltodextrin glucosidase
RA	252,572	A→G	59.7%	H530R (CAT→CGT)	malZ →	maltodextrin glucosidase
RA	253,007	C→T	50.6%	L127L (TTG→TTA)	yajB ←	conserved hypothetical protein
RA	253,013	A→G	54.2%	N125N (AAT→AAC)	yajB ←	conserved hypothetical protein
RA	253,031	A→G	79.8%	R119R (CGT→CGC)	yajB ←	conserved hypothetical protein
RA	253,035	G→T	76.5%	P118Q (CCA→CAA)	yajB ←	conserved hypothetical protein
RA	253,046	C→T	81.0%	P114P (CCG→CCA)	yajB ←	conserved hypothetical protein
RA	253,049	C→A	80.9%	L113F (TTG→TTT) ‡	yajB ←	conserved hypothetical protein
RA	253,051	A→G	81.0%	L113L (TTG→CTG) ‡	yajB ←	conserved hypothetical protein
RA	256,007	G→A	47.7%	A84A (GCG→GCA)	yajC →	SecYEG protein translocase auxillary subunit
RA	258,025	G→A	13.5%	D18N (GAC→AAC)	secF →	SecYEG protein translocase auxillary subunit
RA	260,129	G→A	41.9%	F118F (TTC→TTT)	tsx ←	nucleoside channel, receptor of phage T6 and colicin K
RA	260,171	T→C	43.4%	P104P (CCA→CCG)	tsx ←	nucleoside channel, receptor of phage T6 and colicin K
RA	260,678	G→A	37.9%	intergenic (‑196/+103)	tsx ← / ← yajI	nucleoside channel, receptor of phage T6 and colicin K/predicted lipoprotein
RA	260,895	G→T	59.2%	A142A (GCC→GCA)	yajI ←	predicted lipoprotein
RA	260,898	A→G	52.3%	N141N (AAT→AAC)	yajI ←	predicted lipoprotein
RA	261,102	C→T	33.2%	P73P (CCG→CCA)	yajI ←	predicted lipoprotein
RA	261,352	A→G	39.7%	intergenic (‑32/‑119)	yajI ← / → ybaD	predicted lipoprotein/conserved hypothetical protein
RA	262,850	G→A	31.8%	L309L (CTG→CTA)	ribD →	fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase
RA	262,906	G→A	50.9%	S328N (AGC→AAC)	ribD →	fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase
RA	262,916	C→T	48.4%	R331R (CGC→CGT)	ribD →	fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase
RA	264,681	A→G	34.8%	P193P (CCA→CCG)	thiL →	thiamin‑monophosphate kinase
RA	264,912	T→G	45.9%	T270T (ACT→ACG)	thiL →	thiamin‑monophosphate kinase
RA	265,813	T→C	43.5%	T264T (ACA→ACG)	yajO ←	predicted oxidoreductase, NAD(P)‑binding
RA	265,816	C→T	41.0%	A263A (GCG→GCA)	yajO ←	predicted oxidoreductase, NAD(P)‑binding
RA	265,981	T→C	34.1%	V208V (GTA→GTG)	yajO ←	predicted oxidoreductase, NAD(P)‑binding
RA	265,993	C→T	31.6%	E204E (GAG→GAA)	yajO ←	predicted oxidoreductase, NAD(P)‑binding
RA	266,955	G→A	63.0%	G564G (GGC→GGT)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	266,958	G→A	61.2%	G563G (GGC→GGT)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	267,465	A→G	100%	T394T (ACT→ACC)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	267,474	A→G	100%	I391I (ATT→ATC)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	267,480	G→A	100%	V389V (GTC→GTT)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	267,495	C→G	64.2%	G384G (GGG→GGC)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	267,498	A→T	62.5%	G383G (GGT→GGA)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	268,176	T→A	33.7%	A157A (GCA→GCT)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	268,179	G→A	33.6%	T156T (ACC→ACT)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	268,233	T→C	52.2%	E138E (GAA→GAG)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	268,245	C→T	38.4%	A134A (GCG→GCA)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	268,248	A→G	41.6%	I133I (ATT→ATC)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	268,251	A→C	42.5%	G132G (GGT→GGG)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase, thiamine‑requiring, FAD‑requiring
RA	269,904	A→G	56.7%	intergenic (‑92/‑114)	xseB ← / → thiI	exonuclease VII small subunit/sulfurtransferase required for thiamine and 4‑thiouridine biosynthesis
RA	271,049	T→C	20.1%	C344C (TGT→TGC)	thiI →	sulfurtransferase required for thiamine and 4‑thiouridine biosynthesis
RA	271,052	T→C	23.7%	G345G (GGT→GGC)	thiI →	sulfurtransferase required for thiamine and 4‑thiouridine biosynthesis
RA	271,058	C→T	22.2%	I347I (ATC→ATT)	thiI →	sulfurtransferase required for thiamine and 4‑thiouridine biosynthesis
RA	271,637	C→T	31.6%	P158P (CCG→CCA)	yajL ←	conserved hypothetical protein
RA	274,364	G→A	46.3%	L258L (CTA→TTA)	yajR ←	predicted transporter
RA	275,944	C→A	34.6%	V77V (GTG→GTT)	cyoE ←	protoheme IX farnesyltransferase
RA	276,399	T→C	53.4%	G39G (GGA→GGG)	cyoD ←	cytochrome o ubiquinol oxidase subunit IV
RA	277,691	G→A	48.9%	L474L (CTG→TTG)	cyoB ←	cytochrome o ubiquinol oxidase subunit I
RA	277,701	T→C	54.8%	P470P (CCA→CCG)	cyoB ←	cytochrome o ubiquinol oxidase subunit I
RA	277,857	C→T	50.0%	A418A (GCG→GCA)	cyoB ←	cytochrome o ubiquinol oxidase subunit I
RA	278,199	G→A	43.8%	T304T (ACC→ACT)	cyoB ←	cytochrome o ubiquinol oxidase subunit I
RA	278,229	A→T	47.5%	V294V (GTT→GTA)	cyoB ←	cytochrome o ubiquinol oxidase subunit I
RA	278,904	C→T	64.2%	L69L (TTG→TTA)	cyoB ←	cytochrome o ubiquinol oxidase subunit I
RA	279,186	G→A	34.2%	S298S (AGC→AGT)	cyoA ←	cytochrome o ubiquinol oxidase subunit II
RA	280,674	C→T	69.9%	T447T (ACG→ACA)	ampG ←	muropeptide transporter
RA	281,469	T→C	33.3%	A182A (GCA→GCG)	ampG ←	muropeptide transporter
RA	281,478	T→C	25.8%	L179L (TTA→TTG)	ampG ←	muropeptide transporter
RA	285,523	T→C	56.2%	F126F (TTT→TTC)	clpP →	proteolytic subunit of ClpA‑ClpP and ClpX‑ClpP ATP‑dependent serine proteases
RA	287,566	C→T	40.5%	T70T (ACC→ACT)	lon →	DNA‑binding ATP‑dependent protease La
RA	287,902	T→C	18.9%	S182S (TCT→TCC)	lon →	DNA‑binding ATP‑dependent protease La
RA	288,179	T→C	49.1%	L275L (TTG→CTG)	lon →	DNA‑binding ATP‑dependent protease La
RA	288,355	A→T	52.3%	R333R (CGA→CGT)	lon →	DNA‑binding ATP‑dependent protease La
RA	289,285	G→A	26.1%	T643T (ACG→ACA)	lon →	DNA‑binding ATP‑dependent protease La
RA	293,984	A→G	40.8%	G11G (GGT→GGC)	ybaX ←	predicted aluminum resistance protein
RA	294,369	A→G	46.8%	T471T (ACT→ACC)	ybaE ←	predicted transporter subunit
RA	297,573	G→C	51.3%	R78R (CGG→CGC)	mdlA →	fused predicted multidrug transporter subunits and ATP‑binding components of ABC superfamily
RA	297,993	C→T	25.1%	R218R (CGC→CGT)	mdlA →	fused predicted multidrug transporter subunits and ATP‑binding components of ABC superfamily
RA	298,842	G→A	71.2%	S501S (TCG→TCA)	mdlA →	fused predicted multidrug transporter subunits and ATP‑binding components of ABC superfamily
RA	299,608	A→G	37.7%	A168A (GCA→GCG)	mdlB →	fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily
RA	299,920	C→T	51.7%	G272G (GGC→GGT)	mdlB →	fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily
RA	299,954	C→T	52.8%	L284L (CTG→TTG)	mdlB →	fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily
RA	300,682	C→T	31.1%	T526T (ACC→ACT)	mdlB →	fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily
RA	300,688	G→T	32.9%	L528L (CTG→CTT)	mdlB →	fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily
RA	300,691	A→G	40.2%	V529V (GTA→GTG)	mdlB →	fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily
RA	300,712	G→A	57.8%	S536S (TCG→TCA)	mdlB →	fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily
RA	300,715	C→T	57.8%	T537T (ACC→ACT)	mdlB →	fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily
RA	302,589	C→T	34.1%	I385I (ATC→ATT)	amtB →	ammonium transporter
RA	302,598	C→T	32.3%	S388S (TCC→TCT)	amtB →	ammonium transporter
RA	303,058	G→A	32.0%	D191D (GAC→GAT)	tesB ←	acyl‑CoA thioesterase II
RA	303,157	C→A	58.6%	L158L (CTG→CTT)	tesB ←	acyl‑CoA thioesterase II
RA	303,976	A→T	35.3%	P43P (CCA→CCT)	ybaY →	predicted outer membrane lipoprotein
RA	304,408	T→A	32.6%	P187P (CCT→CCA)	ybaY →	predicted outer membrane lipoprotein
RA	304,425	C→A	31.7%	intergenic (+5/+26)	ybaY → / ← ybaZ	predicted outer membrane lipoprotein/predicted methyltransferase
RA	305,631	A→G	29.3%	L486L (TTA→CTA)	ylaB ←	conserved inner membrane protein
RA	306,800	G→A	24.4%	A96V (GCT→GTT)	ylaB ←	conserved inner membrane protein
RA	306,979	C→T	44.9%	S36S (TCG→TCA)	ylaB ←	conserved inner membrane protein
RA	307,962	C→T	47.4%	A142A (GCG→GCA)	maa ←	maltose O‑acetyltransferase
RA	307,965	G→A	47.9%	R141R (CGC→CGT)	maa ←	maltose O‑acetyltransferase
RA	308,299	T→C	54.4%	Q30R (CAG→CGG)	maa ←	maltose O‑acetyltransferase
RA	309,067	T→A	40.5%	V37V (GTA→GTT)	ybaJ ←	hypothetical protein
RA	310,164	C→T	47.5%	L903L (CTG→CTA)	acrB ←	multidrug efflux system protein
RA	311,087	G→T	60.9%	H596N (CAT→AAT)	acrB ←	multidrug efflux system protein
RA	312,072	C→T	51.5%	K267K (AAG→AAA)	acrB ←	multidrug efflux system protein
RA	312,078	G→C	51.5%	V265V (GTC→GTG)	acrB ←	multidrug efflux system protein
RA	312,081	G→A	46.5%	D264D (GAC→GAT)	acrB ←	multidrug efflux system protein
RA	312,090	C→T	47.9%	L261L (CTG→CTA)	acrB ←	multidrug efflux system protein
RA	312,225	C→A	31.1%	A216A (GCG→GCT)	acrB ←	multidrug efflux system protein
RA	312,228	C→T	31.0%	A215A (GCG→GCA)	acrB ←	multidrug efflux system protein
RA	312,237	G→A	47.9%	A212A (GCC→GCT)	acrB ←	multidrug efflux system protein
RA	312,246	C→T	57.0%	A209A (GCG→GCA)	acrB ←	multidrug efflux system protein
RA	312,408	G→A	32.0%	S155S (TCC→TCT)	acrB ←	multidrug efflux system protein
RA	312,429	G→A	43.0%	T148T (ACC→ACT)	acrB ←	multidrug efflux system protein
RA	314,859	T→C	100%	N210N (AAT→AAC)	acrR →	DNA‑binding transcriptional regulator
RA	316,042	T→A	44.5%	S346S (TCT→TCA)	kefA →	fused mechanosensitive channel proteins
RA	316,051	T→G	38.9%	L349L (CTT→CTG)	kefA →	fused mechanosensitive channel proteins
RA	317,602	A→G	51.1%	L866L (TTA→TTG)	kefA →	fused mechanosensitive channel proteins
RA	318,020	C→A	18.3%	R1006S (CGT→AGT)	kefA →	fused mechanosensitive channel proteins
RA	318,136	A→G	35.0%	A1044A (GCA→GCG)	kefA →	fused mechanosensitive channel proteins
RA	320,261	C→T	100%	D127D (GAC→GAT)	apt →	adenine phosphoribosyltransferase
RA	321,361	G→A	81.4%	L267L (CTG→CTA)	dnaX →	DNA polymerase III/DNA elongation factor III, tau and gamma subunits
RA	321,373	C→T	81.4%	A271A (GCC→GCT)	dnaX →	DNA polymerase III/DNA elongation factor III, tau and gamma subunits
RA	323,098	G→A	44.3%	P75P (CCG→CCA)	recR →	gap repair protein
RA	323,233	G→T	19.0%	P120P (CCG→CCT)	recR →	gap repair protein
RA	323,413	G→A	100%	E180E (GAG→GAA)	recR →	gap repair protein
RA	323,771	C→T	50.0%	G61G (GGC→GGT)	htpG →	molecular chaperone HSP90 family
RA	327,386	C→T	66.7%	S288F (TCC→TTC)	hemH →	ferrochelatase
RA	327,396	C→G	53.4%	A291A (GCC→GCG)	hemH →	ferrochelatase
RA	327,825	A→G	38.7%	R206R (CGT→CGC)	aes ←	acetyl esterase
RA	329,175	A→T	14.3%	S194S (TCA→TCT)	gsk →	inosine/guanosine kinase
RA	329,715	T→C	40.4%	H374H (CAT→CAC)	gsk →	inosine/guanosine kinase
RA	330,082	G→A	44.5%	T542T (ACC→ACT)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	330,091	G→A	39.2%	I539I (ATC→ATT)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	330,103	G→A	43.8%	G535G (GGC→GGT)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	330,220	A→G	20.8%	G496G (GGT→GGC)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	331,123	T→C	56.4%	K195K (AAA→AAG)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	331,210	C→T	20.3%	V166V (GTG→GTA)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	331,222	A→G	24.9%	V162V (GTT→GTC)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	331,345	A→G	24.3%	G121G (GGT→GGC)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	333,415	G→A	30.7%	A11A (GCG→GCA)	ushA →	bifunctional UDP‑sugar hydrolase and 5'‑nucleotidase
RA	333,922	C→T	34.0%	N180N (AAC→AAT)	ushA →	bifunctional UDP‑sugar hydrolase and 5'‑nucleotidase
RA	333,931	C→T	42.8%	Y183Y (TAC→TAT)	ushA →	bifunctional UDP‑sugar hydrolase and 5'‑nucleotidase
RA	334,384	T→G	57.5%	L334L (CTT→CTG)	ushA →	bifunctional UDP‑sugar hydrolase and 5'‑nucleotidase
RA	334,390	T→C	100%	T336T (ACT→ACC)	ushA →	bifunctional UDP‑sugar hydrolase and 5'‑nucleotidase
RA	334,651	G→A	39.7%	V423V (GTG→GTA)	ushA →	bifunctional UDP‑sugar hydrolase and 5'‑nucleotidase
RA	335,821	T→G	59.7%	R243R (CGA→CGC)	ybaP ←	conserved hypothetical protein
RA	337,371	C→T	25.7%	R826R (CGG→CGA)	copA ←	copper transporter
RA	338,292	A→G	100%	T519T (ACT→ACC)	copA ←	copper transporter
RA	338,301	T→C	100%	T516T (ACA→ACG)	copA ←	copper transporter
RA	338,325	A→G	100%	A508A (GCT→GCC)	copA ←	copper transporter
RA	338,643	A→G	13.1%	R402R (CGT→CGC)	copA ←	copper transporter
RA	339,753	C→T	37.7%	E32E (GAG→GAA)	copA ←	copper transporter
RA	345,177	A→C	29.0%	R42R (CGA→CGC)	ybbM →	predicted inner membrane protein
RA	345,441	T→A	59.1%	I130I (ATT→ATA)	ybbM →	predicted inner membrane protein
RA	346,932	T→C	52.0%	Y227C (TAC→TGC)	ybbO ←	predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain
RA	346,941	C→G	47.4%	W224S (TGG→TCG)	ybbO ←	predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain
RA	347,999	C→T	43.3%	C99C (TGC→TGT)	gcl →	glyoxylate carboligase
RA	348,014	A→T	47.4%	A104A (GCA→GCT)	gcl →	glyoxylate carboligase
RA	348,416	A→G	37.1%	L238L (CTA→CTG)	gcl →	glyoxylate carboligase
RA	348,854	T→C	58.2%	G384G (GGT→GGC)	gcl →	glyoxylate carboligase
RA	349,604	T→C	49.3%	F36F (TTT→TTC)	hyi →	hydroxypyruvate isomerase
RA	349,637	T→G	52.5%	H47Q (CAT→CAG)	hyi →	hydroxypyruvate isomerase
RA	351,261	T→C	23.3%	N137D (AAT→GAT)	purK ←	N5‑carboxyaminoimidazole ribonucleotide synthase
RA	351,262	T→G	23.4%	A136A (GCA→GCC)	purK ←	N5‑carboxyaminoimidazole ribonucleotide synthase
RA	351,286	A→T	31.3%	G128G (GGT→GGA)	purK ←	N5‑carboxyaminoimidazole ribonucleotide synthase
RA	352,455	C→T	33.6%	Q187Q (CAG→CAA)	lpxH ←	UDP‑2,3‑diacylglucosamine pyrophosphatase
RA	354,219	A→G	24.4%	P178P (CCA→CCG)	cysS →	cysteinyl‑tRNA synthetase
RA	354,489	C→T	40.7%	S268S (TCC→TCT)	cysS →	cysteinyl‑tRNA synthetase
RA	354,510	T→C	39.3%	F275F (TTT→TTC)	cysS →	cysteinyl‑tRNA synthetase
RA	354,519	C→T	38.7%	R278R (CGC→CGT)	cysS →	cysteinyl‑tRNA synthetase
RA	355,392	G→A	36.5%	R79R (CGC→CGT)	ybcI ←	conserved inner membrane protein
RA	355,401	A→C	44.1%	F76L (TTT→TTG) ‡	ybcI ←	conserved inner membrane protein
RA	355,403	A→G	44.1%	F76L (TTT→CTT) ‡	ybcI ←	conserved inner membrane protein
RA	355,755	C→G	49.1%	S65T (AGC→ACC)	ybcJ ←	predicted RNA‑binding protein
RA	364,740	G→C	52.5%	V82V (GTC→GTG)	entD ←	phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex
RA	365,118	G→T	35.7%	intergenic (‑133/+33)	entD ← / ← fepA	phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex/iron‑enterobactin outer membrane transporter
RA	365,150	A→T	34.5%	intergenic (‑165/+1)	entD ← / ← fepA	phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex/iron‑enterobactin outer membrane transporter
RA	365,160	G→A	27.7%	T744T (ACC→ACT)	fepA ←	iron‑enterobactin outer membrane transporter
RA	365,163	G→A	24.5%	N743N (AAC→AAT)	fepA ←	iron‑enterobactin outer membrane transporter
RA	365,166	T→A	26.8%	V742V (GTA→GTT) ‡	fepA ←	iron‑enterobactin outer membrane transporter
RA	365,168	C→T	26.4%	V742I (GTA→ATA) ‡	fepA ←	iron‑enterobactin outer membrane transporter
RA	365,751	G→C	28.3%	V547V (GTC→GTG)	fepA ←	iron‑enterobactin outer membrane transporter
RA	365,796	T→C	39.0%	K532K (AAA→AAG)	fepA ←	iron‑enterobactin outer membrane transporter
RA	366,756	A→G	42.4%	R212R (CGT→CGC)	fepA ←	iron‑enterobactin outer membrane transporter
RA	368,298	A→G	47.1%	Q196R (CAG→CGG)	fes →	enterobactin/ferric enterobactin esterase
RA	368,308	T→G	35.1%	P199P (CCT→CCG)	fes →	enterobactin/ferric enterobactin esterase
RA	369,416	G→A	37.8%	Q121Q (CAG→CAA)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	370,210	T→A	39.9%	V386E (GTA→GAA)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	370,232	G→A	38.3%	E393E (GAG→GAA)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	372,202	G→A	53.3%	R1050Q (CGG→CAG)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	372,206	T→C	53.4%	R1051R (CGT→CGC)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	372,419	G→C	25.2%	T1122T (ACG→ACC)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	372,440	T→C	33.3%	H1129H (CAT→CAC)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	372,467	C→A	62.0%	S1138S (TCC→TCA)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	372,491	T→C	53.0%	G1146G (GGT→GGC)	entF →	enterobactin synthase multienzyme complex component, ATP‑dependent
RA	373,537	C→T	25.2%	D129D (GAC→GAT)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	373,549	G→A	23.7%	E133E (GAG→GAA)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	373,562	G→C	26.2%	E138Q (GAA→CAA) ‡	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	373,563	A→C	26.2%	E138A (GAA→GCA) ‡	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	373,571	T→C	23.6%	L141L (TTG→CTG)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	373,918	T→A	18.7%	V256V (GTT→GTA)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,053	G→T	24.9%	R301R (CGG→CGT)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,062	T→A	22.3%	L304L (CTT→CTA)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,081	G→A	20.7%	A311T (GCA→ACA)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,084	C→A	22.7%	H312N (CAT→AAT)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,087	G→A	22.9%	V313I (GTC→ATC)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,218	C→T	44.4%	G356G (GGC→GGT)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,222	C→T	44.4%	L358L (CTG→TTG)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,230	C→T	43.4%	R360R (CGC→CGT)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	374,231	T→C	43.5%	Y361H (TAT→CAT)	fepE →	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	375,663	G→A	42.9%	G141G (GGC→GGT)	fepG ←	iron‑enterobactin transporter subunit
RA	375,669	G→A	56.4%	R139R (CGC→CGT)	fepG ←	iron‑enterobactin transporter subunit
RA	376,142	C→G	33.6%	A315A (GCG→GCC)	fepD ←	iron‑enterobactin transporter subunit
RA	376,151	C→T	37.0%	V312V (GTG→GTA)	fepD ←	iron‑enterobactin transporter subunit
RA	376,561	C→T	19.4%	V176I (GTC→ATC)	fepD ←	iron‑enterobactin transporter subunit
RA	377,893	G→A	46.1%	G233S (GGT→AGT)	ybdA →	predicted transporter
RA	378,404	A→G	44.7%	H403R (CAT→CGT)	ybdA →	predicted transporter
RA	379,015	T→C	100%	A131A (GCA→GCG)	fepB ←	iron‑enterobactin transporter subunit
RA	380,351	C→T	54.2%	V190V (GTC→GTT)	entC →	isochorismate synthase 1
RA	382,496	G→A	18.7%	V510V (GTG→GTA)	entE →	2,3‑dihydroxybenzoate‑AMP ligase component of enterobactin synthase multienzyme complex
RA	383,076	C→G	32.1%	T162T (ACC→ACG)	entB →	isochorismatase
RA	383,184	C→T	28.6%	G198G (GGC→GGT)	entB →	isochorismatase
RA	383,199	T→C	32.2%	T203T (ACT→ACC)	entB →	isochorismatase
RA	384,346	C→T	32.1%	F50F (TTC→TTT)	ybdB →	conserved hypothetical protein
RA	384,349	T→C	34.5%	G51G (GGT→GGC)	ybdB →	conserved hypothetical protein
RA	384,350	T→C	34.5%	L52L (TTA→CTA) ‡	ybdB →	conserved hypothetical protein
RA	384,352	A→G	40.4%	L52L (TTA→TTG) ‡	ybdB →	conserved hypothetical protein
RA	384,355	A→G	40.4%	L53L (CTA→CTG)	ybdB →	conserved hypothetical protein
RA	384,439	A→G	84.5%	V81V (GTA→GTG)	ybdB →	conserved hypothetical protein
RA	384,445	A→G	84.5%	T83T (ACA→ACG)	ybdB →	conserved hypothetical protein
RA	384,454	T→C	76.7%	N86N (AAT→AAC)	ybdB →	conserved hypothetical protein
RA	384,457	A→C	100%	A87A (GCA→GCC)	ybdB →	conserved hypothetical protein
RA	384,705	A→G	37.3%	intergenic (+95/‑86)	ybdB → / → cstA	conserved hypothetical protein/carbon starvation protein
RA	385,720	G→A	41.0%	L310L (CTG→CTA)	cstA →	carbon starvation protein
RA	385,723	C→T	41.0%	T311T (ACC→ACT)	cstA →	carbon starvation protein
RA	386,498	T→C	45.3%	L570L (TTG→CTG)	cstA →	carbon starvation protein
RA	388,228	C→T	35.9%	A49A (GCG→GCA)	ybdH ←	predicted oxidoreductase
RA	388,248	T→C	47.1%	K43E (AAA→GAA)	ybdH ←	predicted oxidoreductase
RA	389,175	T→G	45.7%	V231V (GTT→GTG)	ybdL →	methionine aminotransferase, PLP‑dependent
RA	389,178	T→A	38.9%	S232S (TCT→TCA)	ybdL →	methionine aminotransferase, PLP‑dependent
RA	389,181	A→G	35.0%	S233S (TCA→TCG)	ybdL →	methionine aminotransferase, PLP‑dependent
RA	389,226	T→C	45.3%	C248C (TGT→TGC)	ybdL →	methionine aminotransferase, PLP‑dependent
RA	389,235	A→T	37.0%	P251P (CCA→CCT)	ybdL →	methionine aminotransferase, PLP‑dependent
RA	389,409	C→T	49.2%	S309S (AGC→AGT)	ybdL →	methionine aminotransferase, PLP‑dependent
RA	389,430	T→C	52.5%	C316C (TGT→TGC)	ybdL →	methionine aminotransferase, PLP‑dependent
RA	390,449	T→C	50.0%	I340V (ATC→GTC)	ybdN ←	conserved hypothetical protein
RA	390,450	G→A	50.0%	G339G (GGC→GGT)	ybdN ←	conserved hypothetical protein
RA	390,468	G→A	37.6%	H333H (CAC→CAT)	ybdN ←	conserved hypothetical protein
RA	390,474	A→G	31.4%	Y331Y (TAT→TAC)	ybdN ←	conserved hypothetical protein
RA	390,483	G→A	21.8%	I328I (ATC→ATT)	ybdN ←	conserved hypothetical protein
RA	395,051	C→T	20.8%	D134D (GAC→GAT)	ahpF →	alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding
RA	395,912	C→T	46.5%	G421G (GGC→GGT)	ahpF →	alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding
RA	395,924	T→A	57.0%	V425V (GTT→GTA)	ahpF →	alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding
RA	396,089	G→C	39.1%	V480V (GTG→GTC)	ahpF →	alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding
RA	400,786	A→C	46.6%	G250G (GGT→GGG)	dacA ←	D‑alanyl‑D‑alanine carboxypeptidase
RA	401,428	A→G	24.6%	T36T (ACT→ACC)	dacA ←	D‑alanyl‑D‑alanine carboxypeptidase
RA	402,421	C→T	27.9%	P114P (CCG→CCA)	rlpA ←	minor lipoprotein
RA	402,439	T→C	31.3%	A108A (GCA→GCG)	rlpA ←	minor lipoprotein
RA	405,082	A→G	11.9%	I236I (ATT→ATC)	mrdA ←	transpeptidase involved in peptidoglycan synthesis
RA	407,006	G→A	40.6%	A158A (GCC→GCT)	cobC ←	predicted alpha‑ribazole‑5'‑P phosphatase
RA	407,009	G→A	40.6%	I157I (ATC→ATT)	cobC ←	predicted alpha‑ribazole‑5'‑P phosphatase
RA	407,027	A→G	49.5%	G151G (GGT→GGC)	cobC ←	predicted alpha‑ribazole‑5'‑P phosphatase
RA	407,336	A→G	24.0%	D48D (GAT→GAC)	cobC ←	predicted alpha‑ribazole‑5'‑P phosphatase
RA	407,349	C→T	22.4%	G44D (GGT→GAT)	cobC ←	predicted alpha‑ribazole‑5'‑P phosphatase
RA	410,370	A→G	60.9%	G662G (GGT→GGC)	leuS ←	leucyl‑tRNA synthetase
RA	412,305	A→G	24.0%	H17H (CAT→CAC)	leuS ←	leucyl‑tRNA synthetase
RA	412,911	T→C	61.5%	Q424Q (CAA→CAG)	lnt ←	apolipoprotein N‑acyltransferase
RA	413,091	C→T	64.6%	S364S (TCG→TCA)	lnt ←	apolipoprotein N‑acyltransferase
RA	413,094	C→A	63.6%	S363S (TCG→TCT)	lnt ←	apolipoprotein N‑acyltransferase
RA	413,105	G→A	50.0%	L360L (CTG→TTG)	lnt ←	apolipoprotein N‑acyltransferase
RA	413,265	C→T	27.9%	K306K (AAG→AAA)	lnt ←	apolipoprotein N‑acyltransferase
RA	413,316	A→G	100%	R289R (CGT→CGC)	lnt ←	apolipoprotein N‑acyltransferase
RA	413,643	A→G	46.3%	S180S (AGT→AGC)	lnt ←	apolipoprotein N‑acyltransferase
RA	413,751	G→T	51.6%	T144T (ACC→ACA)	lnt ←	apolipoprotein N‑acyltransferase
RA	413,754	C→T	40.9%	L143L (CTG→CTA)	lnt ←	apolipoprotein N‑acyltransferase
RA	414,378	G→A	17.6%	V236V (GTC→GTT)	ybeX ←	predicteed ion transport
RA	414,381	T→C	17.2%	E235E (GAA→GAG)	ybeX ←	predicteed ion transport
RA	414,813	A→G	42.8%	C91C (TGT→TGC)	ybeX ←	predicteed ion transport
RA	417,078	C→T	46.1%	S393S (TCG→TCA)	miaB ←	isopentenyl‑adenosine A37 tRNA methylthiolase
RA	417,081	T→A	46.1%	T392T (ACA→ACT)	miaB ←	isopentenyl‑adenosine A37 tRNA methylthiolase
RA	417,084	A→C	36.8%	G391G (GGT→GGG)	miaB ←	isopentenyl‑adenosine A37 tRNA methylthiolase
RA	418,711	C→T	50.0%	L104L (CTG→TTG)	ubiF →	2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase
RA	418,722	T→C	77.4%	Y107Y (TAT→TAC)	ubiF →	2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase
RA	418,848	G→A	59.2%	E149E (GAG→GAA)	ubiF →	2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase
RA	418,917	G→A	55.6%	R172R (CGG→CGA)	ubiF →	2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase
RA	421,648	A→G	14.4%	G277G (GGT→GGC)	asnB ←	asparagine synthetase B
RA	422,899	T→C	51.9%	S243S (TCA→TCG)	nagD ←	UMP phosphatase
RA	422,902	C→T	52.2%	P242P (CCG→CCA)	nagD ←	UMP phosphatase
RA	422,914	G→A	52.2%	S238S (AGC→AGT)	nagD ←	UMP phosphatase
RA	422,917	G→T	51.7%	P237P (CCC→CCA)	nagD ←	UMP phosphatase
RA	422,926	A→C	46.1%	P234P (CCT→CCG)	nagD ←	UMP phosphatase
RA	423,196	A→G	100%	N144N (AAT→AAC)	nagD ←	UMP phosphatase
RA	423,211	A→G	100%	R139R (CGT→CGC)	nagD ←	UMP phosphatase
RA	423,289	G→A	55.1%	F113F (TTC→TTT)	nagD ←	UMP phosphatase
RA	423,948	C→T	44.4%	E316E (GAG→GAA)	nagC ←	DNA‑binding transcriptional dual regulator
RA	424,830	C→T	32.4%	A22A (GCG→GCA)	nagC ←	DNA‑binding transcriptional dual regulator
RA	424,941	T→C	27.9%	K371R (AAG→AGG)	nagA ←	N‑acetylglucosamine‑6‑phosphate deacetylase
RA	425,081	G→A	60.6%	C324C (TGC→TGT)	nagA ←	N‑acetylglucosamine‑6‑phosphate deacetylase
RA	426,121	T→C	30.0%	K264K (AAA→AAG)	nagB ←	glucosamine‑6‑phosphate deaminase
RA	428,765	T→G	38.1%	G507G (GGT→GGG)	nagE →	fused N‑acetyl glucosamine specific PTS enzyme IICBA components
RA	428,771	C→T	31.5%	V509V (GTC→GTT)	nagE →	fused N‑acetyl glucosamine specific PTS enzyme IICBA components
RA	429,630	T→C	61.6%	V79V (GTT→GTC)	glnS →	glutamyl‑tRNA synthetase
RA	429,633	G→T	60.6%	E80D (GAG→GAT)	glnS →	glutamyl‑tRNA synthetase
RA	429,921	A→G	36.3%	K176K (AAA→AAG)	glnS →	glutamyl‑tRNA synthetase
RA	429,936	A→G	38.0%	S181S (TCA→TCG)	glnS →	glutamyl‑tRNA synthetase
RA	432,675	T→C	55.0%	S347S (TCT→TCC)	ybfM →	predicted outer membrane porin
RA	434,130	C→T	39.9%	intergenic (‑183/+106)	fur ← / ← fldA	DNA‑binding transcriptional dual regulator/flavodoxin 1
RA	435,077	C→T	28.7%	Q41Q (CAG→CAA)	ybfE ←	LexA regulated protein
RA	435,104	T→C	59.2%	E32E (GAA→GAG)	ybfE ←	LexA regulated protein
RA	435,666	T→C	55.0%	A146A (GCA→GCG)	ybfF ←	conserved hypothetical protein
RA	435,681	A→T	61.3%	T141T (ACT→ACA)	ybfF ←	conserved hypothetical protein
RA	435,693	C→T	54.7%	S137S (TCG→TCA)	ybfF ←	conserved hypothetical protein
RA	435,813	T→A	34.6%	A97A (GCA→GCT)	ybfF ←	conserved hypothetical protein
RA	435,831	G→A	38.3%	G91G (GGC→GGT)	ybfF ←	conserved hypothetical protein
RA	437,386	G→A	48.0%	R176R (AGG→AGA)	pgm →	phosphoglucomutase
RA	438,503	C→T	28.9%	intergenic (+4/‑210)	pgm → / → ybfP	phosphoglucomutase/hypothetical protein
RA	438,506	T→C	28.9%	intergenic (+7/‑207)	pgm → / → ybfP	phosphoglucomutase/hypothetical protein
RA	438,507	T→A	31.1%	intergenic (+8/‑206)	pgm → / → ybfP	phosphoglucomutase/hypothetical protein
RA	441,066	A→G	70.7%	I167I (ATT→ATC)	potE ←	putrescine/proton symporter
RA	441,078	A→G	62.6%	G163G (GGT→GGC)	potE ←	putrescine/proton symporter
RA	441,081	G→T	52.3%	V162V (GTC→GTA)	potE ←	putrescine/proton symporter
RA	441,084	G→C	52.4%	V161V (GTC→GTG)	potE ←	putrescine/proton symporter
RA	442,546	T→C	73.3%	N406D (AAT→GAT)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,078	G→A	28.9%	H228H (CAC→CAT)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,087	T→C	30.4%	K225K (AAA→AAG)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,090	G→A	32.8%	H224H (CAC→CAT)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,102	A→G	32.9%	D220D (GAT→GAC)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,210	T→A	19.6%	A184A (GCA→GCT)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,240	G→A	26.1%	G174G (GGC→GGT)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,246	G→A	22.6%	H172H (CAC→CAT)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,255	C→A	30.5%	L169L (CTG→CTT)	speF ←	ornithine decarboxylase isozyme, inducible
RA	443,261	G→A	24.8%	G167G (GGC→GGT)	speF ←	ornithine decarboxylase isozyme, inducible
RA	445,418	T→C	100%	E766E (GAA→GAG)	kdpD ←	fused sensory histidine kinase in two‑component regulatory system with KdpE
RA	445,484	T→C	56.1%	V744V (GTA→GTG)	kdpD ←	fused sensory histidine kinase in two‑component regulatory system with KdpE
RA	447,521	T→C	54.8%	R65R (CGA→CGG)	kdpD ←	fused sensory histidine kinase in two‑component regulatory system with KdpE
RA	447,524	C→A	49.8%	G64G (GGG→GGT)	kdpD ←	fused sensory histidine kinase in two‑component regulatory system with KdpE
RA	449,111	A→G	100%	G409G (GGT→GGC)	kdpB ←	potassium translocating ATPase, subunit B
RA	449,567	C→T	48.5%	A257A (GCG→GCA)	kdpB ←	potassium translocating ATPase, subunit B
RA	449,666	C→G	70.2%	L224L (CTG→CTC)	kdpB ←	potassium translocating ATPase, subunit B
RA	450,085	G→A	63.3%	L85L (CTG→TTG)	kdpB ←	potassium translocating ATPase, subunit B
RA	451,488	C→T	21.8%	A182A (GCG→GCA)	kdpA ←	potassium translocating ATPase, subunit A
RA	451,498	A→G	27.5%	V179A (GTC→GCC)	kdpA ←	potassium translocating ATPase, subunit A
RA	451,502	G→A	29.6%	L178L (CTA→TTA)	kdpA ←	potassium translocating ATPase, subunit A
RA	451,698	A→G	42.4%	N112N (AAT→AAC)	kdpA ←	potassium translocating ATPase, subunit A
RA	451,701	G→A	40.2%	T111T (ACC→ACT)	kdpA ←	potassium translocating ATPase, subunit A
RA	451,725	C→G	30.9%	L103L (CTG→CTC)	kdpA ←	potassium translocating ATPase, subunit A
RA	452,550	G→A	34.3%	R172H (CGC→CAC)	phr →	deoxyribodipyrimidine photolyase, FAD‑binding
RA	452,584	T→G	26.8%	P183P (CCT→CCG)	phr →	deoxyribodipyrimidine photolyase, FAD‑binding
RA	454,239	G→T	54.7%	A282A (GCC→GCA)	ybgH ←	predicted transporter
RA	454,254	A→G	75.8%	S277S (AGT→AGC)	ybgH ←	predicted transporter
RA	454,269	C→G	66.7%	T272T (ACG→ACC)	ybgH ←	predicted transporter
RA	454,272	C→A	68.1%	V271V (GTG→GTT)	ybgH ←	predicted transporter
RA	454,293	C→A	64.8%	R264R (CGG→CGT)	ybgH ←	predicted transporter
RA	454,397	G→A	59.3%	L230L (CTG→TTG)	ybgH ←	predicted transporter
RA	454,398	T→C	59.3%	I229M (ATA→ATG) ‡	ybgH ←	predicted transporter
RA	454,400	T→C	59.3%	I229V (ATA→GTA) ‡	ybgH ←	predicted transporter
RA	454,683	C→T	30.3%	P134P (CCG→CCA)	ybgH ←	predicted transporter
RA	460,885	A→G	28.0%	D13D (GAT→GAC)	gltA ←	citrate synthase
RA	461,006	T→G	100%	intergenic (‑83/‑626)	gltA ← / → sdhC	citrate synthase/succinate dehydrogenase, membrane subunit, binds cytochrome b556
RA	464,227	T→A	41.5%	D28E (GAT→GAA)	sdhB →	succinate dehydrogenase, FeS subunit
RA	464,263	C→T	36.4%	I40I (ATC→ATT)	sdhB →	succinate dehydrogenase, FeS subunit
RA	464,269	A→G	40.9%	L42L (CTA→CTG)	sdhB →	succinate dehydrogenase, FeS subunit
RA	464,737	T→C	40.8%	S198S (AGT→AGC)	sdhB →	succinate dehydrogenase, FeS subunit
RA	464,749	C→T	54.2%	S202S (AGC→AGT)	sdhB →	succinate dehydrogenase, FeS subunit
RA	465,500	C→T	34.7%	L114L (CTG→TTG)	sucA →	2‑oxoglutarate decarboxylase, thiamin‑requiring
RA	466,055	A→T	62.5%	M299L (ATG→TTG)	sucA →	2‑oxoglutarate decarboxylase, thiamin‑requiring
RA	466,096	G→T	58.2%	V312V (GTG→GTT)	sucA →	2‑oxoglutarate decarboxylase, thiamin‑requiring
RA	467,413	G→T	49.3%	P751P (CCG→CCT)	sucA →	2‑oxoglutarate decarboxylase, thiamin‑requiring
RA	468,885	A→T	26.2%	A303A (GCA→GCT)	sucB →	dihydrolipoyltranssuccinase
RA	468,888	C→T	26.1%	V304V (GTC→GTT)	sucB →	dihydrolipoyltranssuccinase
RA	468,912	C→G	35.3%	T312T (ACC→ACG)	sucB →	dihydrolipoyltranssuccinase
RA	471,372	C→T	56.0%	G246G (GGC→GGT)	sucD →	succinyl‑CoA synthetase, NAD(P)‑binding, alpha subunit
RA	471,378	G→A	54.9%	A248A (GCG→GCA)	sucD →	succinyl‑CoA synthetase, NAD(P)‑binding, alpha subunit
RA	471,384	C→G	57.1%	A250A (GCC→GCG)	sucD →	succinyl‑CoA synthetase, NAD(P)‑binding, alpha subunit
RA	471,399	G→T	53.8%	G255G (GGG→GGT)	sucD →	succinyl‑CoA synthetase, NAD(P)‑binding, alpha subunit
RA	478,602	T→C	74.7%	A230A (GCT→GCC)	cydA →	cytochrome d terminal oxidase, subunit I
RA	479,895	A→G	41.2%	V133V (GTA→GTG)	cydB →	cytochrome d terminal oxidase, subunit II
RA	479,986	T→C	16.9%	L164L (TTG→CTG)	cydB →	cytochrome d terminal oxidase, subunit II
RA	480,138	T→C	62.0%	C214C (TGT→TGC)	cydB →	cytochrome d terminal oxidase, subunit II
RA	481,239	C→T	49.3%	R11R (CGC→CGT)	ybgC →	predicted acyl‑CoA thioesterase
RA	481,958	C→T	40.6%	N117N (AAC→AAT)	tolQ →	membrane spanning protein in TolA‑TolQ‑TolR complex
RA	484,644	T→C	54.7%	D150D (GAT→GAC)	tolB →	periplasmic protein
RA	484,650	G→A	66.1%	V152V (GTG→GTA)	tolB →	periplasmic protein
RA	484,668	C→T	40.3%	G158G (GGC→GGT)	tolB →	periplasmic protein
RA	484,794	G→A	62.2%	Q200Q (CAG→CAA)	tolB →	periplasmic protein
RA	484,995	T→C	73.4%	S267S (AGT→AGC)	tolB →	periplasmic protein
RA	485,250	T→C	41.5%	N352N (AAT→AAC)	tolB →	periplasmic protein
RA	490,274	G→C	34.4%	A218A (GCG→GCC)	pnuC →	predicted nicotinamide mononucleotide transporter
RA	491,553	A→G	41.1%	S74P (TCG→CCG)	ybgS ←	conserved hypothetical protein
RA	493,466	A→G	22.5%	L195L (CTT→CTC)	gpmA ←	phosphoglyceromutase 1
RA	494,552	T→C	51.7%	A247A (GCA→GCG)	galM ←	galactose‑1‑epimerase
RA	494,622	C→T	41.4%	S224N (AGC→AAC)	galM ←	galactose‑1‑epimerase
RA	494,741	C→T	50.5%	Q184Q (CAG→CAA)	galM ←	galactose‑1‑epimerase
RA	497,197	C→T	100%	L96L (CTG→CTA)	galT ←	galactose‑1‑phosphate uridylyltransferase
RA	498,623	T→A	46.8%	intergenic (‑113/+148)	galE ← / ← modF	UDP‑galactose‑4‑epimerase/fused subunits of molybdate transporter and ATP‑binding components of ABC superfamily
RA	498,627	C→T	51.0%	intergenic (‑117/+144)	galE ← / ← modF	UDP‑galactose‑4‑epimerase/fused subunits of molybdate transporter and ATP‑binding components of ABC superfamily
RA	498,918	A→C	26.6%	R442R (CGT→CGG)	modF ←	fused subunits of molybdate transporter and ATP‑binding components of ABC superfamily
RA	498,939	C→G	37.5%	L435L (CTG→CTC)	modF ←	fused subunits of molybdate transporter and ATP‑binding components of ABC superfamily
RA	499,428	A→T	30.7%	D272E (GAT→GAA)	modF ←	fused subunits of molybdate transporter and ATP‑binding components of ABC superfamily
RA	499,568	C→T	5.8%	A226T (GCA→ACA)	modF ←	fused subunits of molybdate transporter and ATP‑binding components of ABC superfamily
RA	501,960	G→C	40.0%	L139L (CTG→CTC)	modA →	molybdate transporter subunit
RA	501,969	C→T	39.2%	G142G (GGC→GGT)	modA →	molybdate transporter subunit
RA	501,984	T→C	46.0%	V147V (GTT→GTC)	modA →	molybdate transporter subunit
RA	501,987	C→T	43.3%	P148P (CCC→CCT)	modA →	molybdate transporter subunit
RA	503,377	C→T	40.2%	D123D (GAC→GAT)	modC →	molybdate transporter subunit
RA	504,034	C→T	70.1%	Y342Y (TAC→TAT)	modC →	molybdate transporter subunit
RA	504,079	G→A	33.2%	H270Y (CAC→TAC)	ybhA ←	predicted hydrolase
RA	505,334	A→C	45.6%	V98V (GTA→GTC)	ybhE →	6‑phosphogluconolactonase
RA	508,902	C→T	44.5%	T187T (ACC→ACT)	ybhI →	predicted transporter
RA	511,079	A→G	59.2%	A374A (GCA→GCG)	ybhJ →	predicted hydratase
RA	511,646	T→A	44.9%	S563S (TCT→TCA)	ybhJ →	predicted hydratase
RA	511,682	C→T	38.7%	T575T (ACC→ACT)	ybhJ →	predicted hydratase
RA	511,688	T→A	33.2%	S577S (TCT→TCA)	ybhJ →	predicted hydratase
RA	511,700	C→A	29.3%	P581P (CCC→CCA)	ybhJ →	predicted hydratase
RA	511,757	G→A	43.1%	G600G (GGG→GGA)	ybhJ →	predicted hydratase
RA	512,180	G→A	51.3%	A741A (GCG→GCA)	ybhJ →	predicted hydratase
RA	512,666	C→T	47.0%	V357V (GTG→GTA)	ybhC ←	predicted pectinesterase
RA	515,011	T→C	46.5%	I234M (ATA→ATG)	bioA ←	7,8‑diaminopelargonic acid synthase, PLP‑dependent
RA	516,305	T→C	100%	T169T (ACT→ACC)	bioB →	biotin synthase
RA	516,365	T→A	42.8%	S189S (TCT→TCA)	bioB →	biotin synthase
RA	520,562	C→T	32.3%	R194R (CGC→CGT)	uvrB →	excinulease of nucleotide excision repair, DNA damage recognition component
RA	520,580	A→T	35.6%	I200I (ATA→ATT)	uvrB →	excinulease of nucleotide excision repair, DNA damage recognition component
RA	521,195	C→T	31.1%	G405G (GGC→GGT)	uvrB →	excinulease of nucleotide excision repair, DNA damage recognition component
RA	521,228	C→A	40.5%	T416T (ACC→ACA)	uvrB →	excinulease of nucleotide excision repair, DNA damage recognition component
RA	521,231	A→C	37.8%	G417G (GGA→GGC)	uvrB →	excinulease of nucleotide excision repair, DNA damage recognition component
RA	521,234	G→A	36.3%	L418L (TTG→TTA)	uvrB →	excinulease of nucleotide excision repair, DNA damage recognition component
RA	521,237	T→C	36.3%	L419L (CTT→CTC)	uvrB →	excinulease of nucleotide excision repair, DNA damage recognition component
RA	521,525	G→T	65.3%	V515V (GTG→GTT)	uvrB →	excinulease of nucleotide excision repair, DNA damage recognition component
RA	522,599	A→C	45.6%	P168P (CCT→CCG)	ybhK ←	predicted transferase with NAD(P)‑binding Rossmann‑fold domain
RA	523,603	C→T	35.5%	G35G (GGC→GGT)	moaA →	molybdopterin biosynthesis protein A
RA	523,609	A→G	37.0%	K37K (AAA→AAG)	moaA →	molybdopterin biosynthesis protein A
RA	523,681	A→T	41.3%	R61S (AGA→AGT)	moaA →	molybdopterin biosynthesis protein A
RA	526,368	C→T	18.3%	I10I (ATC→ATT)	ybhL →	predicted inner membrane protein
RA	526,404	T→G	55.7%	A22A (GCT→GCG)	ybhL →	predicted inner membrane protein
RA	526,896	G→T	55.9%	T186T (ACG→ACT)	ybhL →	predicted inner membrane protein
RA	526,903	C→T	40.7%	L189L (CTG→TTG)	ybhL →	predicted inner membrane protein
RA	527,724	G→A	37.6%	R159R (CGG→CGA)	ybhM →	conserved inner membrane protein
RA	527,734	A→G	30.9%	I163V (ATA→GTA)	ybhM →	conserved inner membrane protein
RA	527,757	G→C	32.6%	V170V (GTG→GTC)	ybhM →	conserved inner membrane protein
RA	528,351	T→C	18.6%	S201S (TCA→TCG)	ybhN ←	conserved inner membrane protein
RA	528,660	C→T	36.1%	T98T (ACG→ACA)	ybhN ←	conserved inner membrane protein
RA	531,429	A→G	24.1%	V115V (GTA→GTG)	ybhQ →	predicted inner membrane protein
RA	531,622	G→A	34.0%	N314N (AAC→AAT)	ybhR ←	predicted transporter subunit
RA	534,192	A→G	51.3%	G415G (GGT→GGC)	ybhF ←	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	535,693	A→G	54.2%	A245A (GCT→GCC)	ybhG ←	predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor
RA	535,699	C→T	57.8%	V243V (GTG→GTA)	ybhG ←	predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor
RA	535,717	T→C	57.2%	L237L (CTA→CTG)	ybhG ←	predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor
RA	535,720	T→C	50.6%	S236S (TCA→TCG)	ybhG ←	predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor
RA	535,723	A→G	50.0%	V235V (GTT→GTC)	ybhG ←	predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor
RA	535,732	C→T	41.8%	V232V (GTG→GTA)	ybhG ←	predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor
RA	539,201	T→C	68.4%	intergenic (+510/+124)	rhlE → / ← dps	RNA helicase/Fe‑binding and storage protein
RA	540,292	C→T	34.6%	L241L (CTG→CTA)	rhtA ←	threonine and homoserine efflux system
RA	540,307	C→G	45.4%	R236R (CGG→CGC)	rhtA ←	threonine and homoserine efflux system
RA	542,507	G→C	46.3%	T336T (ACC→ACG)	ybiP ←	predicted hydrolase, inner membrane
RA	544,210	T→G	34.4%	L37L (CTT→CTG)	mntR →	transcriptional regulator of mntH
RA	545,274	A→G	28.1%	A237A (GCA→GCG)	ybiR →	predicted transporter
RA	545,280	C→T	27.7%	R239R (CGC→CGT)	ybiR →	predicted transporter
RA	547,030	C→T	50.0%	L51F (CTT→TTT) ‡	ybiT →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	547,032	T→A	46.4%	L51L (CTT→CTA) ‡	ybiT →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	547,042	C→T	44.0%	L55L (CTG→TTG)	ybiT →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	547,857	C→T	74.5%	T326T (ACC→ACT)	ybiT →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	548,040	T→C	43.5%	Y387Y (TAT→TAC)	ybiT →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	548,043	T→C	37.7%	A388A (GCT→GCC)	ybiT →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	548,052	C→T	36.7%	H391H (CAC→CAT)	ybiT →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	551,567	C→T	30.6%	V653I (GTT→ATT)	ybiW ←	predicted pyruvate formate lyase
RA	551,589	A→G	34.1%	N645N (AAT→AAC)	ybiW ←	predicted pyruvate formate lyase
RA	551,601	T→C	37.0%	K641K (AAA→AAG)	ybiW ←	predicted pyruvate formate lyase
RA	552,051	T→C	53.1%	A491A (GCA→GCG)	ybiW ←	predicted pyruvate formate lyase
RA	552,054	C→T	53.0%	S490S (TCG→TCA)	ybiW ←	predicted pyruvate formate lyase
RA	552,606	C→T	26.5%	T306T (ACG→ACA)	ybiW ←	predicted pyruvate formate lyase
RA	552,615	G→C	27.6%	L303L (CTC→CTG)	ybiW ←	predicted pyruvate formate lyase
RA	552,627	G→A	36.6%	R299R (CGC→CGT)	ybiW ←	predicted pyruvate formate lyase
RA	552,639	C→T	58.4%	P295P (CCG→CCA)	ybiW ←	predicted pyruvate formate lyase
RA	552,642	G→A	64.5%	Y294Y (TAC→TAT)	ybiW ←	predicted pyruvate formate lyase
RA	552,675	T→C	42.6%	S283S (TCA→TCG)	ybiW ←	predicted pyruvate formate lyase
RA	552,723	C→T	29.4%	L267L (CTG→CTA)	ybiW ←	predicted pyruvate formate lyase
RA	553,997	T→C	40.9%	L153L (CTA→CTG)	ybiY ←	predicted pyruvate formate lyase activating enzyme
RA	554,004	A→G	47.4%	M151T (ATG→ACG)	ybiY ←	predicted pyruvate formate lyase activating enzyme
RA	554,030	C→T	54.5%	E142E (GAG→GAA)	ybiY ←	predicted pyruvate formate lyase activating enzyme
RA	554,036	A→G	62.2%	G140G (GGT→GGC)	ybiY ←	predicted pyruvate formate lyase activating enzyme
RA	554,039	C→A	46.1%	S139S (TCG→TCT)	ybiY ←	predicted pyruvate formate lyase activating enzyme
RA	555,416	T→G	30.9%	M211L (ATG→CTG)	moeB ←	molybdopterin synthase sulfurylase
RA	555,561	G→C	33.9%	T162T (ACC→ACG)	moeB ←	molybdopterin synthase sulfurylase
RA	555,570	A→C	37.0%	G159G (GGT→GGG)	moeB ←	molybdopterin synthase sulfurylase
RA	556,511	C→T	42.0%	E257E (GAG→GAA)	moeA ←	molybdopterin biosynthesis protein
RA	557,423	A→C	18.2%	intergenic (‑142/‑62)	moeA ← / → iaaA	molybdopterin biosynthesis protein/L‑asparaginase
RA	559,806	C→G	46.8%	A351A (GCC→GCG)	cmr →	multidrug efflux system protein
RA	559,815	A→G	61.8%	G354G (GGA→GGG)	cmr →	multidrug efflux system protein
RA	559,842	T→C	67.6%	V363V (GTT→GTC)	cmr →	multidrug efflux system protein
RA	560,690	A→G	29.8%	S175P (TCG→CCG)	ybjI ←	conserved hypothetical protein
RA	560,691	C→T	29.7%	V174V (GTG→GTA)	ybjI ←	conserved hypothetical protein
RA	560,697	A→G	34.1%	I172I (ATT→ATC)	ybjI ←	conserved hypothetical protein
RA	561,090	T→C	12.7%	V41V (GTA→GTG)	ybjI ←	conserved hypothetical protein
RA	561,102	T→G	11.7%	G37G (GGA→GGC)	ybjI ←	conserved hypothetical protein
RA	563,953	A→G	22.2%	G316G (GGT→GGC)	ybjL ←	predicted transporter
RA	563,956	T→C	23.0%	V315V (GTA→GTG)	ybjL ←	predicted transporter
RA	563,959	A→G	22.8%	A314A (GCT→GCC)	ybjL ←	predicted transporter
RA	564,523	T→A	25.6%	A126A (GCA→GCT)	ybjL ←	predicted transporter
RA	566,936	T→C	78.2%	L271L (CTA→CTG)	poxB ←	pyruvate dehydrogenase (pyruvate oxidase), thiamin‑dependent, FAD‑binding
RA	566,948	G→A	74.5%	D267D (GAC→GAT)	poxB ←	pyruvate dehydrogenase (pyruvate oxidase), thiamin‑dependent, FAD‑binding
RA	566,954	G→A	66.7%	N265N (AAC→AAT)	poxB ←	pyruvate dehydrogenase (pyruvate oxidase), thiamin‑dependent, FAD‑binding
RA	570,909	A→G	43.7%	S216S (TCT→TCC)	ybjE ←	predicted transporter
RA	571,477	T→C	35.5%	K27R (AAA→AGA)	ybjE ←	predicted transporter
RA	571,482	C→T	35.1%	A25A (GCG→GCA)	ybjE ←	predicted transporter
RA	572,195	A→G	33.3%	S184S (TCT→TCC)	aqpZ ←	aquaporin
RA	572,219	A→G	45.7%	I176I (ATT→ATC)	aqpZ ←	aquaporin
RA	572,252	A→G	29.5%	A165A (GCT→GCC)	aqpZ ←	aquaporin
RA	572,255	G→A	26.1%	I164I (ATC→ATT)	aqpZ ←	aquaporin
RA	572,826	A→G	61.1%	intergenic (‑80/‑346)	aqpZ ← / → ybjD	aquaporin/conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	573,489	C→T	100%	G106G (GGC→GGT)	ybjD →	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	577,604	C→T	56.9%	L187L (CTG→TTG)	macB →	fused macrolide transporter subunits and ATP‑binding component and membrane component of ABC superfamily
RA	577,624	T→C	64.0%	R193R (CGT→CGC)	macB →	fused macrolide transporter subunits and ATP‑binding component and membrane component of ABC superfamily
RA	577,885	T→A	48.0%	I280I (ATT→ATA)	macB →	fused macrolide transporter subunits and ATP‑binding component and membrane component of ABC superfamily
RA	579,722	C→T	22.3%	Y37Y (TAC→TAT)	clpS →	regulatory protein for ClpA substrate specificity
RA	581,798	T→C	44.4%	T612T (ACT→ACC)	clpA →	ATPase and specificity subunit of ClpA‑ClpP ATP‑dependent serine protease, chaperone activity
RA	581,912	T→C	36.1%	F650F (TTT→TTC)	clpA →	ATPase and specificity subunit of ClpA‑ClpP ATP‑dependent serine protease, chaperone activity
RA	584,788	T→A	66.7%	I369I (ATA→ATT)	cydC ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	584,816	G→T	60.4%	S360Y (TCT→TAT)	cydC ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	584,839	A→G	38.2%	S352S (TCT→TCC)	cydC ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	584,875	C→T	37.0%	T340T (ACG→ACA)	cydC ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	584,917	A→G	55.9%	F326F (TTT→TTC)	cydC ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	584,926	C→T	64.6%	E323E (GAG→GAA)	cydC ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	584,947	G→A	46.8%	D316D (GAC→GAT)	cydC ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	585,997	A→T	37.0%	V555V (GTT→GTA)	cydD ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	586,692	G→A	59.2%	L324L (CTG→TTG)	cydD ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	586,705	G→A	65.9%	G319G (GGC→GGT)	cydD ←	fused cysteine transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	591,494	A→G	23.1%	P524P (CCA→CCG)	ftsK →	DNA‑binding membrane protein required for chromosome resolution and partitioning
RA	593,672	C→T	50.0%	S1250S (AGC→AGT)	ftsK →	DNA‑binding membrane protein required for chromosome resolution and partitioning
RA	593,687	T→C	41.8%	G1255G (GGT→GGC)	ftsK →	DNA‑binding membrane protein required for chromosome resolution and partitioning
RA	593,689	C→T	43.8%	A1256V (GCG→GTG)	ftsK →	DNA‑binding membrane protein required for chromosome resolution and partitioning
RA	594,043	C→T	54.1%	intergenic (+131/‑25)	ftsK → / → lolA	DNA‑binding membrane protein required for chromosome resolution and partitioning/chaperone for lipoproteins
RA	596,595	C→T	42.3%	L157L (CTG→TTG)	serS →	seryl‑tRNA synthetase, also charges selenocysteinyl‑tRNA with serine
RA	596,924	C→T	17.7%	C266C (TGC→TGT)	serS →	seryl‑tRNA synthetase, also charges selenocysteinyl‑tRNA with serine
RA	597,053	T→C	46.6%	T309T (ACT→ACC)	serS →	seryl‑tRNA synthetase, also charges selenocysteinyl‑tRNA with serine
RA	597,062	A→G	36.8%	A312A (GCA→GCG)	serS →	seryl‑tRNA synthetase, also charges selenocysteinyl‑tRNA with serine
RA	597,078	T→C	33.7%	L318L (TTG→CTG)	serS →	seryl‑tRNA synthetase, also charges selenocysteinyl‑tRNA with serine
RA	597,305	G→T	37.0%	L393L (CTG→CTT)	serS →	seryl‑tRNA synthetase, also charges selenocysteinyl‑tRNA with serine
RA	597,804	C→T	52.7%	A49A (GCC→GCT)	dmsA →	dimethyl sulfoxide reductase, anaerobic, subunit A
RA	598,245	C→T	39.9%	G196G (GGC→GGT)	dmsA →	dimethyl sulfoxide reductase, anaerobic, subunit A
RA	598,260	C→T	41.0%	Y201Y (TAC→TAT)	dmsA →	dimethyl sulfoxide reductase, anaerobic, subunit A
RA	599,499	C→T	46.1%	R614R (CGC→CGT)	dmsA →	dimethyl sulfoxide reductase, anaerobic, subunit A
RA	599,895	C→T	25.9%	N746N (AAC→AAT)	dmsA →	dimethyl sulfoxide reductase, anaerobic, subunit A
RA	600,547	T→C	22.1%	C145C (TGT→TGC)	dmsB →	dimethyl sulfoxide reductase, anaerobic, subunit B
RA	600,553	G→A	28.4%	L147L (CTG→CTA)	dmsB →	dimethyl sulfoxide reductase, anaerobic, subunit B
RA	600,571	C→A	32.4%	G153G (GGC→GGA)	dmsB →	dimethyl sulfoxide reductase, anaerobic, subunit B
RA	600,640	T→C	40.7%	F176F (TTT→TTC)	dmsB →	dimethyl sulfoxide reductase, anaerobic, subunit B
RA	600,667	C→T	53.5%	P185P (CCC→CCT)	dmsB →	dimethyl sulfoxide reductase, anaerobic, subunit B
RA	600,670	T→C	53.5%	N186N (AAT→AAC)	dmsB →	dimethyl sulfoxide reductase, anaerobic, subunit B
RA	600,685	G→A	54.8%	P191P (CCG→CCA)	dmsB →	dimethyl sulfoxide reductase, anaerobic, subunit B
RA	601,089	A→G	53.1%	I120V (ATA→GTA) ‡	dmsC →	dimethyl sulfoxide reductase, anaerobic, subunit C
RA	601,091	A→G	54.7%	I120M (ATA→ATG) ‡	dmsC →	dimethyl sulfoxide reductase, anaerobic, subunit C
RA	601,112	C→A	49.2%	V127V (GTC→GTA)	dmsC →	dimethyl sulfoxide reductase, anaerobic, subunit C
RA	601,113	A→G	48.7%	I128V (ATC→GTC)	dmsC →	dimethyl sulfoxide reductase, anaerobic, subunit C
RA	601,323	G→A	100%	V198M (GTG→ATG)	dmsC →	dimethyl sulfoxide reductase, anaerobic, subunit C
RA	602,686	C→T	52.2%	S39S (TCC→TCT)	ycaD →	predicted transporter
RA	608,403	C→A	46.1%	T617T (ACG→ACT)	pflB ←	pyruvate formate lyase I
RA	608,544	A→G	29.7%	N570N (AAT→AAC)	pflB ←	pyruvate formate lyase I
RA	611,667	C→T	53.1%	P555P (CCG→CCA)	ycaO ←	conserved hypothetical protein
RA	611,675	G→A	50.0%	L553L (CTG→TTG)	ycaO ←	conserved hypothetical protein
RA	611,679	G→A	50.0%	Y551Y (TAC→TAT)	ycaO ←	conserved hypothetical protein
RA	612,948	C→T	31.1%	A128A (GCG→GCA)	ycaO ←	conserved hypothetical protein
RA	614,735	G→T	50.0%	L128L (CTG→CTT)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	614,741	G→A	51.6%	A130A (GCG→GCA)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	614,754	C→A	47.3%	R135S (CGT→AGT)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	615,035	T→C	36.0%	Y228Y (TAT→TAC)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	615,055	G→A	45.8%	G235D (GGC→GAC) ‡	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	615,056	C→T	45.5%	G235G (GGC→GGT) ‡	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	615,065	T→C	39.3%	F238F (TTT→TTC)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	615,101	T→C	100%	G250G (GGT→GGC)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	615,142	A→C	42.2%	E264A (GAA→GCA)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	615,152	A→G	52.8%	K267K (AAA→AAG)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	616,302	T→C	40.8%	G264G (GGT→GGC)	aroA →	5‑enolpyruvylshikimate‑3‑phosphate synthetase
RA	616,311	T→C	48.2%	R267R (CGT→CGC)	aroA →	5‑enolpyruvylshikimate‑3‑phosphate synthetase
RA	616,470	G→C	16.6%	T320T (ACG→ACC)	aroA →	5‑enolpyruvylshikimate‑3‑phosphate synthetase
RA	617,155	C→A	42.4%	Q65K (CAA→AAA)	ycaL →	predicted peptidase with chaperone function
RA	617,160	C→G	41.6%	V66V (GTC→GTG)	ycaL →	predicted peptidase with chaperone function
RA	617,166	T→C	42.0%	S68S (AGT→AGC)	ycaL →	predicted peptidase with chaperone function
RA	617,184	T→G	42.7%	G74G (GGT→GGG)	ycaL →	predicted peptidase with chaperone function
RA	618,082	A→G	11.5%	V61V (GTA→GTG)	cmk →	cytidylate kinase
RA	619,623	C→T	33.5%	D310D (GAC→GAT)	rpsA →	30S ribosomal subunit protein S1
RA	619,840	T→C	56.7%	L383L (TTG→CTG)	rpsA →	30S ribosomal subunit protein S1
RA	621,170	C→T	41.0%	A51V (GCG→GTG)	ycaI →	conserved inner membrane protein
RA	622,463	G→T	28.5%	G482V (GGA→GTA)	ycaI →	conserved inner membrane protein
RA	626,032	T→C	55.8%	L323S (TTG→TCG)	lpxK →	lipid A 4'kinase
RA	626,245	C→T	30.8%	A53V (GCC→GTC)	ycaQ →	conserved hypothetical protein
RA	626,252	T→C	34.6%	S55S (AGT→AGC)	ycaQ →	conserved hypothetical protein
RA	626,273	T→C	31.6%	S62S (AGT→AGC)	ycaQ →	conserved hypothetical protein
RA	626,283	A→G	28.7%	N66D (AAT→GAT)	ycaQ →	conserved hypothetical protein
RA	626,915	G→C	65.4%	L276L (CTG→CTC)	ycaQ →	conserved hypothetical protein
RA	627,664	T→C	26.8%	R38R (CGT→CGC)	kdsB →	3‑deoxy‑manno‑octulosonate cytidylyltransferase
RA	628,135	C→T	40.4%	Y195Y (TAC→TAT)	kdsB →	3‑deoxy‑manno‑octulosonate cytidylyltransferase
RA	629,369	A→G	20.3%	R244R (CGT→CGC)	ycbC ←	conserved inner membrane protein
RA	632,854	T→C	41.0%	F169F (TTT→TTC)	mukE →	protein involved in chromosome partitioning
RA	634,576	C→T	46.5%	L518L (CTG→TTG)	mukB →	fused chromosome partitioning proteins
RA	634,587	A→C	42.9%	R521R (CGA→CGC)	mukB →	fused chromosome partitioning proteins
RA	636,105	T→G	33.3%	S1027S (TCT→TCG)	mukB →	fused chromosome partitioning proteins
RA	636,108	C→T	33.2%	Y1028Y (TAC→TAT)	mukB →	fused chromosome partitioning proteins
RA	636,129	C→T	35.8%	L1035L (CTC→CTT)	mukB →	fused chromosome partitioning proteins
RA	636,828	T→C	23.3%	G1268G (GGT→GGC)	mukB →	fused chromosome partitioning proteins
RA	636,843	G→A	37.9%	V1273V (GTG→GTA)	mukB →	fused chromosome partitioning proteins
RA	636,849	C→G	38.0%	L1275L (CTC→CTG)	mukB →	fused chromosome partitioning proteins
RA	636,861	G→A	37.9%	V1279V (GTG→GTA)	mukB →	fused chromosome partitioning proteins
RA	642,198	T→G	84.4%	I71L (ATC→CTC)	aspC ←	aspartate aminotransferase, PLP‑dependent
RA	643,235	G→A	22.6%	D149D (GAC→GAT)	ompF ←	outer membrane porin 1a (Ia;b;F)
RA	646,579	C→T	100%	A159A (GCG→GCA)	pncB ←	nicotinate phosphoribosyltransferase
RA	646,601	C→T	100%	S152N (AGC→AAC)	pncB ←	nicotinate phosphoribosyltransferase
RA	646,754	G→A	22.6%	S101F (TCC→TTC)	pncB ←	nicotinate phosphoribosyltransferase
RA	647,827	C→T	61.4%	N169N (AAC→AAT)	pepN →	aminopeptidase N
RA	647,833	C→T	79.7%	R171R (CGC→CGT)	pepN →	aminopeptidase N
RA	647,923	T→C	36.6%	F201F (TTT→TTC)	pepN →	aminopeptidase N
RA	647,926	C→T	36.5%	T202T (ACC→ACT)	pepN →	aminopeptidase N
RA	647,929	G→C	37.6%	T203T (ACG→ACC)	pepN →	aminopeptidase N
RA	647,932	T→C	37.6%	R204R (CGT→CGC)	pepN →	aminopeptidase N
RA	647,938	T→C	37.1%	G206G (GGT→GGC)	pepN →	aminopeptidase N
RA	647,941	C→T	37.0%	R207R (CGC→CGT)	pepN →	aminopeptidase N
RA	647,947	A→G	37.1%	V209V (GTA→GTG)	pepN →	aminopeptidase N
RA	647,950	A→G	45.6%	A210A (GCA→GCG)	pepN →	aminopeptidase N
RA	648,652	T→C	36.9%	G444G (GGT→GGC)	pepN →	aminopeptidase N
RA	648,655	A→G	36.9%	T445T (ACA→ACG)	pepN →	aminopeptidase N
RA	648,659	A→G	37.7%	I447V (ATT→GTT)	pepN →	aminopeptidase N
RA	649,279	G→A	48.4%	A653A (GCG→GCA)	pepN →	aminopeptidase N
RA	649,288	A→G	48.4%	L656L (CTA→CTG)	pepN →	aminopeptidase N
RA	650,405	T→C	69.0%	A113A (GCA→GCG)	ssuB ←	alkanesulfonate transporter subunit
RA	650,408	G→C	68.9%	A112A (GCC→GCG)	ssuB ←	alkanesulfonate transporter subunit
RA	663,694	T→C	51.2%	K202K (AAA→AAG)	ycbX ←	predicted 2Fe‑2S cluster‑containing protein
RA	663,712	C→G	34.9%	V196V (GTG→GTC)	ycbX ←	predicted 2Fe‑2S cluster‑containing protein
RA	666,009	C→T	36.3%	N489N (AAC→AAT)	ycbY →	predicted methyltransferase
RA	666,267	A→G	36.1%	E575E (GAA→GAG)	ycbY →	predicted methyltransferase
RA	667,181	T→C	36.5%	S173S (AGT→AGC)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,193	G→A	34.7%	V177V (GTG→GTA)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,194	C→T	32.3%	L178L (CTG→TTG)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,197	T→C	31.9%	L179L (TTG→CTG)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,202	T→C	31.9%	L180L (CTT→CTC)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,205	T→C	31.9%	D181D (GAT→GAC)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,214	A→T	38.7%	T184T (ACA→ACT)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,544	A→G	19.6%	E294E (GAA→GAG)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,565	G→A	30.3%	V301V (GTG→GTA)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	667,631	A→G	57.9%	E323E (GAA→GAG)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	668,000	G→T	45.3%	R446R (CGG→CGT)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	668,010	C→T	41.7%	L450L (CTG→TTG)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	668,013	C→T	41.7%	L451L (CTG→TTG)	uup →	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	669,695	G→A	31.2%	G332G (GGG→GGA)	pqiA →	paraquat‑inducible membrane protein A
RA	669,698	T→C	31.2%	H333H (CAT→CAC)	pqiA →	paraquat‑inducible membrane protein A
RA	673,313	C→T	30.5%	A562A (GCG→GCA)	ycbZ ←	predicted peptidase
RA	675,311	T→A	36.5%	V43E (GTG→GAG)	ycbG →	conserved hypothetical protein
RA	675,913	A→G	31.0%	S280S (TCT→TCC)	ompA ←	outer membrane protein A (3a;II*;G;d)
RA	675,925	G→A	32.4%	R276R (CGC→CGT)	ompA ←	outer membrane protein A (3a;II*;G;d)
RA	675,938	C→G	30.6%	G272A (GGT→GCT)	ompA ←	outer membrane protein A (3a;II*;G;d)
RA	676,082	T→G	74.5%	N224T (AAC→ACC)	ompA ←	outer membrane protein A (3a;II*;G;d)
RA	676,579	A→T	42.5%	A58A (GCT→GCA)	ompA ←	outer membrane protein A (3a;II*;G;d)
RA	676,582	G→A	43.0%	G57G (GGC→GGT)	ompA ←	outer membrane protein A (3a;II*;G;d)
RA	677,923	C→T	71.1%	G29G (GGC→GGT)	yccR →	conserved hypothetical protein
RA	677,935	G→A	48.7%	L33L (CTG→CTA)	yccR →	conserved hypothetical protein
RA	678,513	T→C	37.2%	G690G (GGA→GGG)	yccS ←	predicted inner membrane protein
RA	679,872	C→T	55.6%	T237T (ACG→ACA)	yccS ←	predicted inner membrane protein
RA	680,673	A→G	30.4%	V125V (GTT→GTC)	yccF ←	conserved inner membrane protein
RA	680,715	G→A	30.0%	G111G (GGC→GGT)	yccF ←	conserved inner membrane protein
RA	683,687	C→A	27.7%	A10S (GCG→TCG)	mgsA ←	methylglyoxal synthase
RA	686,819	T→C	30.1%	F19F (TTT→TTC)	yccX →	predicted acylphosphatase
RA	689,494	A→G	57.7%	R219R (AGA→AGG)	hyaA →	hydrogenase 1, small subunit
RA	689,507	C→T	54.0%	L224L (CTG→TTG)	hyaA →	hydrogenase 1, small subunit
RA	691,194	G→A	61.8%	A414A (GCG→GCA)	hyaB →	hydrogenase 1, large subunit
RA	693,202	G→A	27.8%	E50E (GAG→GAA)	hyaE →	protein involved in processing of HyaA and HyaB proteins
RA	693,657	G→A	49.2%	V70V (GTG→GTA)	hyaF →	protein involved in nickel incorporation into hydrogenase‑1 proteins
RA	694,020	G→T	24.0%	T191T (ACG→ACT)	hyaF →	protein involved in nickel incorporation into hydrogenase‑1 proteins
RA	694,038	G→A	24.2%	E197E (GAG→GAA)	hyaF →	protein involved in nickel incorporation into hydrogenase‑1 proteins
RA	694,044	T→C	32.5%	D199D (GAT→GAC)	hyaF →	protein involved in nickel incorporation into hydrogenase‑1 proteins
RA	697,873	C→T	28.1%	R186R (CGC→CGT)	appA →	phosphoanhydride phosphorylase
RA	709,461	T→A	41.3%	A138A (GCA→GCT)	yceJ ←	predicted cytochrome b561
RA	709,728	G→C	36.8%	P49P (CCC→CCG)	yceJ ←	predicted cytochrome b561
RA	709,734	T→C	36.7%	K47K (AAA→AAG) ‡	yceJ ←	predicted cytochrome b561
RA	709,736	T→G	39.0%	K47Q (AAA→CAA) ‡	yceJ ←	predicted cytochrome b561
RA	711,123	T→C	37.5%	T98A (ACA→GCA)	solA ←	N‑methyltryptophan oxidase, FAD‑binding
RA	711,127	A→G	29.0%	D96D (GAT→GAC)	solA ←	N‑methyltryptophan oxidase, FAD‑binding
RA	711,136	G→A	32.0%	G93G (GGC→GGT)	solA ←	N‑methyltryptophan oxidase, FAD‑binding
RA	711,139	A→G	27.6%	L92L (CTT→CTC)	solA ←	N‑methyltryptophan oxidase, FAD‑binding
RA	712,419	C→T	35.5%	G339G (GGG→GGA)	pyrC ←	dihydro‑orotase
RA	712,689	A→T	52.6%	G249G (GGT→GGA)	pyrC ←	dihydro‑orotase
RA	712,701	T→A	46.6%	R245R (CGA→CGT)	pyrC ←	dihydro‑orotase
RA	713,725	T→C	44.3%	E126G (GAA→GGA)	yceB ←	predicted lipoprotein
RA	715,819	A→G	28.9%	G112G (GGT→GGC)	mdtH ←	predicted drug efflux system
RA	715,831	G→A	38.6%	L108L (CTC→CTT)	mdtH ←	predicted drug efflux system
RA	716,482	T→G	35.2%	L31L (CTT→CTG)	rimJ →	ribosomal‑protein‑S5‑alanine N‑acetyltransferase
RA	719,284	G→T	53.9%	P206P (CCG→CCT)	mviN →	predicted inner membrane protein
RA	719,287	C→T	56.2%	H207H (CAC→CAT)	mviN →	predicted inner membrane protein
RA	719,311	C→T	43.5%	V215V (GTC→GTT)	mviN →	predicted inner membrane protein
RA	719,312	C→T	43.5%	L216L (CTG→TTG)	mviN →	predicted inner membrane protein
RA	719,317	G→A	42.8%	P217P (CCG→CCA)	mviN →	predicted inner membrane protein
RA	720,741	A→G	42.5%	V961A (GTC→GCC)	rne ←	fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome
RA	722,240	G→C	54.4%	A461A (GCC→GCG)	rne ←	fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome
RA	725,764	T→G	36.4%	P29P (CCA→CCC)	yceF ←	hypothetical protein
RA	728,538	T→C	38.8%	I175I (ATT→ATC)	fabH →	3‑oxoacyl‑[acyl‑carrier‑protein] synthase III
RA	728,565	T→C	31.8%	S184S (AGT→AGC)	fabH →	3‑oxoacyl‑[acyl‑carrier‑protein] synthase III
RA	728,790	T→C	29.0%	G259G (GGT→GGC)	fabH →	3‑oxoacyl‑[acyl‑carrier‑protein] synthase III
RA	728,796	T→G	27.4%	S261S (TCT→TCG)	fabH →	3‑oxoacyl‑[acyl‑carrier‑protein] synthase III
RA	728,802	T→C	28.3%	D263D (GAT→GAC)	fabH →	3‑oxoacyl‑[acyl‑carrier‑protein] synthase III
RA	732,551	C→T	45.3%	intergenic (+116/‑4)	fabF → / → pabC	3‑oxoacyl‑[acyl‑carrier‑protein] synthase II/4‑amino‑4‑deoxychorismate lyase component of para‑aminobenzoate synthase multienzyme complex
RA	734,426	A→G	8.1%	K16K (AAA→AAG)	tmk →	thymidylate kinase
RA	739,219	C→T	29.5%	A530T (GCT→ACT)	fhuE ←	ferric‑rhodotorulic acid outer membrane transporter
RA	740,069	C→G	34.0%	S246S (TCG→TCC)	fhuE ←	ferric‑rhodotorulic acid outer membrane transporter
RA	740,600	G→T	57.4%	T69T (ACC→ACA)	fhuE ←	ferric‑rhodotorulic acid outer membrane transporter
RA	740,625	C→T	43.9%	S61N (AGC→AAC)	fhuE ←	ferric‑rhodotorulic acid outer membrane transporter
RA	741,621	G→A	31.3%	L40L (TTG→TTA)	ycfL →	hypothetical protein
RA	744,026	G→C	38.6%	G226A (GGT→GCT)	nagZ →	beta N‑acetyl‑glucosaminidase
RA	744,046	A→G	37.3%	T233A (ACC→GCC)	nagZ →	beta N‑acetyl‑glucosaminidase
RA	745,050	C→T	13.2%	intergenic (+110/‑290)	ycfP → / → ndh	conserved hypothetical protein/respiratory NADH dehydrogenase 2/cupric reductase
RA	745,073	C→T	32.7%	intergenic (+133/‑267)	ycfP → / → ndh	conserved hypothetical protein/respiratory NADH dehydrogenase 2/cupric reductase
RA	745,079	G→C	36.8%	intergenic (+139/‑261)	ycfP → / → ndh	conserved hypothetical protein/respiratory NADH dehydrogenase 2/cupric reductase
RA	745,114	T→C	20.5%	intergenic (+174/‑226)	ycfP → / → ndh	conserved hypothetical protein/respiratory NADH dehydrogenase 2/cupric reductase
RA	745,115	C→A	20.6%	intergenic (+175/‑225)	ycfP → / → ndh	conserved hypothetical protein/respiratory NADH dehydrogenase 2/cupric reductase
RA	746,152	A→G	59.6%	V271V (GTA→GTG)	ndh →	respiratory NADH dehydrogenase 2/cupric reductase
RA	749,132	T→C	36.5%	K166K (AAA→AAG)	ycfS ←	conserved hypothetical protein
RA	749,138	A→C	38.8%	R164R (CGT→CGG)	ycfS ←	conserved hypothetical protein
RA	749,141	G→C	44.2%	A163A (GCC→GCG)	ycfS ←	conserved hypothetical protein
RA	749,147	G→A	48.7%	I161I (ATC→ATT)	ycfS ←	conserved hypothetical protein
RA	749,183	T→C	33.6%	K149K (AAA→AAG)	ycfS ←	conserved hypothetical protein
RA	749,189	T→A	33.7%	S147S (TCA→TCT)	ycfS ←	conserved hypothetical protein
RA	749,866	G→A	30.7%	R1118R (CGC→CGT)	mfd ←	transcription‑repair coupling factor
RA	750,205	C→G	50.4%	E1005D (GAG→GAC)	mfd ←	transcription‑repair coupling factor
RA	752,626	G→A	100%	D198D (GAC→GAT)	mfd ←	transcription‑repair coupling factor
RA	753,377	T→A	100%	S348S (TCA→TCT)	ycfT ←	predicted inner membrane protein
RA	754,163	C→G	46.1%	R86R (CGG→CGC)	ycfT ←	predicted inner membrane protein
RA	755,221	C→T	29.5%	S180S (AGC→AGT)	lolC →	outer membrane‑specific lipoprotein transporter subunit
RA	756,086	G→A	57.6%	Q71Q (CAG→CAA)	lolD →	outer membrane‑specific lipoprotein transporter subunit
RA	756,089	A→G	57.7%	P72P (CCA→CCG)	lolD →	outer membrane‑specific lipoprotein transporter subunit
RA	756,778	C→T	52.0%	I68I (ATC→ATT)	lolE →	outer membrane‑specific lipoprotein transporter subunit
RA	756,787	G→A	57.6%	V71V (GTG→GTA)	lolE →	outer membrane‑specific lipoprotein transporter subunit
RA	756,802	T→C	74.8%	T76T (ACT→ACC)	lolE →	outer membrane‑specific lipoprotein transporter subunit
RA	756,824	C→A	100%	H84N (CAC→AAC)	lolE →	outer membrane‑specific lipoprotein transporter subunit
RA	759,362	C→T	46.6%	G196G (GGC→GGT)	cobB →	deacetylase of acetyl‑CoA synthetase, NAD‑dependent
RA	760,905	C→T	39.0%	V26I (GTC→ATC)	ymfA ←	predicted inner membrane protein
RA	761,731	A→C	21.3%	P118P (CCT→CCG)	potD ←	polyamine transporter subunit
RA	761,758	A→G	24.4%	N109N (AAT→AAC)	potD ←	polyamine transporter subunit
RA	761,767	G→A	20.6%	N106N (AAC→AAT)	potD ←	polyamine transporter subunit
RA	761,770	T→G	23.0%	T105T (ACA→ACC) ‡	potD ←	polyamine transporter subunit
RA	761,771	G→C	23.0%	T105R (ACA→AGA) ‡	potD ←	polyamine transporter subunit
RA	762,995	A→G	43.3%	L235L (CTT→CTC)	potB ←	polyamine transporter subunit
RA	763,004	G→T	43.4%	V232V (GTC→GTA)	potB ←	polyamine transporter subunit
RA	767,700	T→C	57.5%	V444V (GTA→GTG)	phoQ ←	sensory histidine kinase in two‑compoent regulatory system with PhoP
RA	768,228	G→A	34.4%	Y268Y (TAC→TAT)	phoQ ←	sensory histidine kinase in two‑compoent regulatory system with PhoP
RA	768,263	A→G	71.8%	L257L (TTG→CTG)	phoQ ←	sensory histidine kinase in two‑compoent regulatory system with PhoP
RA	769,085	G→C	38.0%	P206P (CCC→CCG)	phoP ←	DNA‑binding response regulator in two‑component regulatory system with PhoQ
RA	769,100	A→T	31.3%	I201I (ATT→ATA)	phoP ←	DNA‑binding response regulator in two‑component regulatory system with PhoQ
RA	771,789	G→C	73.6%	A33G (GCC→GGC)	hflD ←	predicted lysogenization regulator
RA	771,851	C→A	45.0%	L12L (CTG→CTT)	hflD ←	predicted lysogenization regulator
RA	773,262	G→C	66.2%	T94T (ACC→ACG)	ymfB ←	bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase
RA	774,341	C→T	68.2%	intergenic (‑135/‑37)	ymfC ← / → icd	23S rRNA pseudouridine synthase/isocitrate dehydrogenase, specific for NADP+
RA	774,641	T→C	44.1%	T88T (ACT→ACC)	icd →	isocitrate dehydrogenase, specific for NADP+
RA	775,331	C→T	65.8%	G318G (GGC→GGT)	icd →	isocitrate dehydrogenase, specific for NADP+
RA	775,352	T→C	51.2%	G325G (GGT→GGC)	icd →	isocitrate dehydrogenase, specific for NADP+
RA	775,538	A→G	68.8%	K387K (AAA→AAG)	icd →	isocitrate dehydrogenase, specific for NADP+
RA	775,559	G→A	56.9%	E394E (GAG→GAA)	icd →	isocitrate dehydrogenase, specific for NADP+
RA	775,571	T→A	50.0%	D398E (GAT→GAA)	icd →	isocitrate dehydrogenase, specific for NADP+
RA	775,580	A→G	30.0%	K401K (AAA→AAG)	icd →	isocitrate dehydrogenase, specific for NADP+
RA	779,653	G→A	48.1%	L12L (CTG→TTG)	ycgK ←	hypothetical protein
RA	780,059	G→T	36.2%	L55L (CTG→CTT)	ycgL →	conserved hypothetical protein
RA	781,790	C→T	50.0%	L273L (TTG→TTA)	hlyE ←	hemolysin E
RA	783,256	C→T	51.5%	G92G (GGC→GGT)	umuD →	DNA polymerase V, subunit D
RA	785,203	C→T	41.2%	A14A (GCG→GCA)	dsbB ←	oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I
RA	785,969	G→A	33.2%	G321G (GGC→GGT)	nhaB ←	sodium:proton antiporter
RA	785,972	A→G	44.0%	V320V (GTT→GTC)	nhaB ←	sodium:proton antiporter
RA	785,978	C→T	44.4%	A318A (GCG→GCA)	nhaB ←	sodium:proton antiporter
RA	785,989	A→G	48.7%	L315L (TTG→CTG)	nhaB ←	sodium:proton antiporter
RA	785,990	C→T	48.6%	A314A (GCG→GCA)	nhaB ←	sodium:proton antiporter
RA	790,744	T→C	100%	N320N (AAT→AAC)	dadA →	D‑amino acid dehydrogenase
RA	791,603	G→A	59.5%	G171S (GGC→AGC)	dadX →	alanine racemase 2, PLP‑binding
RA	792,109	G→A	83.0%	V339V (GTG→GTA)	dadX →	alanine racemase 2, PLP‑binding
RA	792,137	C→T	56.2%	L349L (CTA→TTA)	dadX →	alanine racemase 2, PLP‑binding
RA	794,838	C→T	40.4%	E153K (GAA→AAA)	ldcA ←	L,D‑carboxypeptidase A
RA	796,568	T→C	35.2%	Q58Q (CAA→CAG)	ycgR ←	protein involved in flagellar function
RA	796,571	A→G	36.4%	S57S (AGT→AGC)	ycgR ←	protein involved in flagellar function
RA	799,135	G→A	57.6%	R152R (CGC→CGT)	treA ←	periplasmic trehalase
RA	799,144	C→G	39.3%	P149P (CCG→CCC)	treA ←	periplasmic trehalase
RA	800,303	T→C	65.5%	A342A (GCA→GCG)	dhaH ←	fused predicted dihydroxyacetone‑specific PTS enzyme HPr component and EI component
RA	800,666	C→T	36.9%	G221G (GGG→GGA)	dhaH ←	fused predicted dihydroxyacetone‑specific PTS enzyme HPr component and EI component
RA	801,843	G→A	32.0%	N43N (AAC→AAT)	dhaL ←	dihydroxyacetone kinase, C‑terminal domain
RA	804,017	G→A	51.6%	R246R (CGG→CGA)	dhaR →	predicted DNA‑binding transcriptional regulator, dihydroxyacetone
RA	804,215	G→A	28.2%	L312L (TTG→TTA)	dhaR →	predicted DNA‑binding transcriptional regulator, dihydroxyacetone
RA	811,407	A→T	62.0%	A537A (GCT→GCA)	ychM ←	predicted transporter
RA	811,442	C→G	70.4%	V526L (GTG→CTG)	ychM ←	predicted transporter
RA	811,467	C→T	53.3%	E517E (GAG→GAA)	ychM ←	predicted transporter
RA	812,424	A→G	40.2%	F198F (TTT→TTC)	ychM ←	predicted transporter
RA	813,484	T→G	36.0%	S202S (TCA→TCC)	prsA ←	phosphoribosylpyrophosphate synthase
RA	815,460	G→C	68.8%	L85L (CTC→CTG)	lolB ←	chaperone for lipoproteins
RA	816,410	C→T	60.6%	S161S (AGC→AGT)	hemA →	glutamyl tRNA reductase
RA	817,435	T→C	36.9%	D70D (GAT→GAC)	prfA →	peptide chain release factor RF‑1
RA	820,100	C→T	54.0%	A189A (GCC→GCT)	ychA →	predicted transcriptional regulator
RA	820,109	G→A	66.3%	M192I (ATG→ATA)	ychA →	predicted transcriptional regulator
RA	820,996	C→T	41.1%	C206C (TGC→TGT)	kdsA →	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase
RA	821,005	G→A	39.5%	P209P (CCG→CCA)	kdsA →	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase
RA	821,054	C→A	27.5%	R226R (CGA→AGA)	kdsA →	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase
RA	824,680	T→C	35.9%	D172D (GAT→GAC)	chaC →	regulatory protein for cation transport
RA	826,674	C→T	53.7%	S357S (AGC→AGT)	ychP →	predicted invasin
RA	826,676	C→A	53.6%	A358E (GCG→GAG)	ychP →	predicted invasin
RA	826,710	G→A	46.0%	Q369Q (CAG→CAA)	ychP →	predicted invasin
RA	827,457	G→A	27.2%	L18L (CTG→TTG)	narL ←	DNA‑binding response regulator in two‑component regulatory system with NarX (or NarQ)
RA	828,872	G→A	35.7%	D142D (GAC→GAT)	narX ←	sensory histidine kinase in two‑component regulatory system with NarL
RA	831,492	T→C	15.1%	intergenic (+465/‑51)	narK → / → narG	nitrate/nitrite transporter/nitrate reductase 1, alpha subunit
RA	832,367	G→A	48.5%	G275G (GGG→GGA)	narG →	nitrate reductase 1, alpha subunit
RA	832,628	T→G	18.0%	V362V (GTT→GTG)	narG →	nitrate reductase 1, alpha subunit
RA	832,634	G→A	22.2%	A364A (GCG→GCA)	narG →	nitrate reductase 1, alpha subunit
RA	834,059	C→T	51.1%	V839V (GTC→GTT)	narG →	nitrate reductase 1, alpha subunit
RA	834,062	C→T	51.8%	G840G (GGC→GGT)	narG →	nitrate reductase 1, alpha subunit
RA	834,107	T→C	57.7%	H855H (CAT→CAC)	narG →	nitrate reductase 1, alpha subunit
RA	834,665	T→C	43.9%	G1041G (GGT→GGC)	narG →	nitrate reductase 1, alpha subunit
RA	834,674	A→G	42.8%	Q1044Q (CAA→CAG)	narG →	nitrate reductase 1, alpha subunit
RA	834,692	G→A	30.8%	Q1050Q (CAG→CAA)	narG →	nitrate reductase 1, alpha subunit
RA	835,957	T→C	47.0%	T225T (ACT→ACC)	narH →	nitrate reductase 1, beta (Fe‑S) subunit
RA	836,119	T→G	63.5%	A279A (GCT→GCG)	narH →	nitrate reductase 1, beta (Fe‑S) subunit
RA	839,437	G→C	100%	intergenic (‑136/+24)	tyrT ← / ← purU	tRNA‑Tyr/formyltetrahydrofolate hydrolase
RA	839,914	A→C	49.5%	R130R (CGT→CGG)	purU ←	formyltetrahydrofolate hydrolase
RA	842,247	A→G	27.9%	P109P (CCA→CCG)	rssB →	response regulator of RpoS
RA	842,947	G→A	36.2%	intergenic (+13/‑189)	rssB → / → galU	response regulator of RpoS/glucose‑1‑phosphate uridylyltransferase
RA	843,576	G→A	41.4%	L147L (TTG→TTA)	galU →	glucose‑1‑phosphate uridylyltransferase
RA	846,580	G→T	100%	T340T (ACC→ACA)	cls ←	cardiolipin synthase 1
RA	849,820	G→A	100%	intergenic (‑1/‑223)	yciI ← / → tonB	hypothetical protein/membrane spanning protein in TonB‑ExbB‑ExbD complex
RA	851,033	A→G	26.2%	T56T (ACT→ACC)	yciA ←	predicted hydrolase
RA	851,042	G→A	50.0%	R53R (CGC→CGT)	yciA ←	predicted hydrolase
RA	852,069	A→T	43.8%	T183T (ACT→ACA)	yciC ←	predicted inner membrane protein
RA	853,846	G→A	29.2%	Y111Y (TAC→TAT)	yciE ←	conserved hypothetical protein
RA	856,437	T→C	39.4%	P311P (CCA→CCG)	trpB ←	tryptophan synthase, beta subunit
RA	856,644	A→T	56.9%	A242A (GCT→GCA)	trpB ←	tryptophan synthase, beta subunit
RA	856,653	G→A	52.9%	G239G (GGC→GGT)	trpB ←	tryptophan synthase, beta subunit
RA	856,734	G→C	32.6%	T212T (ACC→ACG)	trpB ←	tryptophan synthase, beta subunit
RA	857,834	C→T	54.8%	A302A (GCG→GCA)	trpC ←	fused indole‑3‑glycerolphosphate synthetase and N‑(5‑phosphoribosyl)anthranilate isomerase
RA	858,231	T→A	52.3%	Q170L (CAG→CTG)	trpC ←	fused indole‑3‑glycerolphosphate synthetase and N‑(5‑phosphoribosyl)anthranilate isomerase
RA	860,339	C→T	57.6%	*521* (TGA→TAA)	trpE ←	component I of anthranilate synthase
RA	860,344	A→C	57.6%	T519T (ACT→ACG)	trpE ←	component I of anthranilate synthase
RA	860,884	T→C	48.3%	S339S (TCA→TCG)	trpE ←	component I of anthranilate synthase
RA	860,896	G→A	38.3%	R335R (CGC→CGT)	trpE ←	component I of anthranilate synthase
RA	860,911	G→A	37.7%	R330R (CGC→CGT)	trpE ←	component I of anthranilate synthase
RA	863,501	C→T	60.4%	S150S (AGC→AGT)	yciO →	conserved hypothetical protein
RA	863,516	G→C	59.2%	S155S (TCG→TCC)	yciO →	conserved hypothetical protein
RA	866,934	A→G	62.7%	L126L (CTT→CTC)	btuR ←	cob(I)alamin adenolsyltransferase/cobinamide ATP‑dependent adenolsyltransferase
RA	869,449	T→A	33.3%	T58T (ACA→ACT)	yciN ←	hypothetical protein
RA	870,646	G→A	61.7%	V215V (GTG→GTA)	topA →	DNA topoisomerase I, omega subunit
RA	871,945	C→T	26.3%	G648G (GGC→GGT)	topA →	DNA topoisomerase I, omega subunit
RA	871,951	T→C	29.7%	D650D (GAT→GAC)	topA →	DNA topoisomerase I, omega subunit
RA	872,874	A→G	31.0%	T22T (ACA→ACG)	cysB →	DNA‑binding transcriptional dual regulator, O‑acetyl‑L‑serine‑binding
RA	874,871	T→C	37.3%	A29A (GCT→GCC)	acnA →	aconitate hydratase 1
RA	875,974	A→G	17.0%	N397S (AAC→AGC)	acnA →	aconitate hydratase 1
RA	876,010	A→T	22.1%	Q409L (CAG→CTG)	acnA →	aconitate hydratase 1
RA	876,263	G→A	29.9%	G493G (GGG→GGA)	acnA →	aconitate hydratase 1
RA	876,311	G→A	60.9%	G509G (GGG→GGA)	acnA →	aconitate hydratase 1
RA	876,315	C→T	60.9%	L511L (CTG→TTG)	acnA →	aconitate hydratase 1
RA	878,242	G→A	41.1%	intergenic (‑128/‑42)	ribA ← / → pgpB	GTP cyclohydrolase II/phosphatidylglycerophosphate phosphatase B
RA	880,072	C→T	59.0%	A187A (GCC→GCT)	yciM →	conserved hypothetical protein
RA	880,747	A→C	67.7%	intergenic (+66/‑128)	yciM → / → pyrF	conserved hypothetical protein/orotidine‑5'‑phosphate decarboxylase
RA	882,776	T→C	31.1%	G175G (GGA→GGG)	yciT ←	predicted DNA‑binding transcriptional regulator
RA	889,529	G→A	28.2%	N155N (AAC→AAT)	fabI ←	enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent
RA	889,789	C→T	49.4%	A69T (GCC→ACC)	fabI ←	enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent
RA	889,796	T→G	47.9%	A66A (GCA→GCC)	fabI ←	enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent
RA	891,052	A→G	42.3%	A179A (GCT→GCC)	sapF ←	predicted antimicrobial peptide transporter subunit
RA	891,127	T→C	37.3%	G154G (GGA→GGG)	sapF ←	predicted antimicrobial peptide transporter subunit
RA	891,136	C→T	37.2%	L151L (TTG→TTA)	sapF ←	predicted antimicrobial peptide transporter subunit
RA	892,843	T→G	21.6%	P210P (CCA→CCC)	sapC ←	predicted antimicrobial peptide transporter subunit
RA	893,176	C→T	44.0%	V99V (GTG→GTA)	sapC ←	predicted antimicrobial peptide transporter subunit
RA	893,899	T→C	50.4%	I176V (ATC→GTC)	sapB ←	predicted antimicrobial peptide transporter subunit
RA	893,980	G→A	56.2%	L149L (CTG→TTG)	sapB ←	predicted antimicrobial peptide transporter subunit
RA	893,993	T→A	36.5%	S144S (TCA→TCT)	sapB ←	predicted antimicrobial peptide transporter subunit
RA	894,163	C→T	14.3%	A88T (GCG→ACG)	sapB ←	predicted antimicrobial peptide transporter subunit
RA	894,957	A→C	35.5%	S370A (TCG→GCG)	sapA ←	predicted antimicrobial peptide transporter subunit
RA	899,437	G→A	100%	V35V (GTG→GTA)	pspD →	peripheral inner membrane phage‑shock protein
RA	899,440	G→T	100%	A36A (GCG→GCT)	pspD →	peripheral inner membrane phage‑shock protein
RA	900,712	C→T	44.1%	T186M (ACG→ATG)	ycjM →	predicted glucosyltransferase
RA	900,737	T→C	36.0%	S194S (AGT→AGC)	ycjM →	predicted glucosyltransferase
RA	901,694	T→C	12.0%	C513C (TGT→TGC)	ycjM →	predicted glucosyltransferase
RA	901,700	T→G	12.1%	T515T (ACT→ACG)	ycjM →	predicted glucosyltransferase
RA	901,719	A→G	18.6%	K522E (AAA→GAA)	ycjM →	predicted glucosyltransferase
RA	901,754	T→C	49.2%	H533H (CAT→CAC)	ycjM →	predicted glucosyltransferase
RA	904,059	C→A	48.0%	R10R (CGC→CGA)	ycjP →	predicted sugar transporter subunit
RA	905,536	A→G	43.3%	T212A (ACT→GCT)	ycjQ →	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	905,541	T→C	52.9%	D213D (GAT→GAC)	ycjQ →	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	906,051	C→T	100%	G26G (GGC→GGT)	ycjR →	hypothetical protein
RA	906,069	T→C	100%	I32I (ATT→ATC)	ycjR →	hypothetical protein
RA	906,094	A→C	37.5%	I41L (ATC→CTC)	ycjR →	hypothetical protein
RA	906,111	G→A	48.6%	A46A (GCG→GCA)	ycjR →	hypothetical protein
RA	906,114	G→A	48.6%	A47A (GCG→GCA)	ycjR →	hypothetical protein
RA	908,257	C→T	63.8%	S145L (TCA→TTA)	ycjT →	predicted hydrolase
RA	910,465	G→A	71.5%	A126A (GCG→GCA)	ycjU →	predicted beta‑phosphoglucomutase
RA	910,937	C→T	25.1%	G59G (GGC→GGT)	ycjV →	predicted sugar transporter subunit
RA	912,048	A→T	24.9%	S54S (TCA→TCT)	ompG →	outer membrane porin
RA	912,291	C→T	26.1%	I135I (ATC→ATT)	ompG →	outer membrane porin
RA	913,128	G→A	31.8%	S258S (AGC→AGT)	ycjW ←	predicted DNA‑binding transcriptional regulator
RA	913,152	G→A	41.6%	A250A (GCC→GCT)	ycjW ←	predicted DNA‑binding transcriptional regulator
RA	913,161	C→T	31.8%	A247A (GCG→GCA)	ycjW ←	predicted DNA‑binding transcriptional regulator
RA	913,954	G→C	41.6%	intergenic (‑53/‑103)	ycjW ← / → ycjX	predicted DNA‑binding transcriptional regulator/conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	915,319	T→A	26.4%	P421P (CCT→CCA)	ycjX →	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	915,361	A→G	20.4%	A435A (GCA→GCG)	ycjX →	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	915,579	C→T	30.8%	D43D (GAC→GAT)	ycjF →	conserved inner membrane protein
RA	915,606	C→T	28.4%	V52V (GTC→GTT)	ycjF →	conserved inner membrane protein
RA	917,203	T→C	9.9%	L182L (TTG→CTG)	tyrR →	DNA‑binding transcriptional dual regulator, tyrosine‑binding
RA	917,229	C→T	100%	R190R (CGC→CGT)	tyrR →	DNA‑binding transcriptional dual regulator, tyrosine‑binding
RA	917,710	A→G	42.2%	M351V (ATG→GTG)	tyrR →	DNA‑binding transcriptional dual regulator, tyrosine‑binding
RA	920,281	C→T	47.8%	L106L (TTG→TTA)	mpaA ←	murein peptide amidase A
RA	920,323	A→G	38.9%	R92R (CGT→CGC)	mpaA ←	murein peptide amidase A
RA	920,335	A→C	35.9%	P88P (CCT→CCG)	mpaA ←	murein peptide amidase A
RA	920,527	G→A	100%	T24T (ACC→ACT)	mpaA ←	murein peptide amidase A
RA	921,380	G→A	35.8%	T142T (ACC→ACT)	ycjY ←	predicted hydrolase
RA	923,755	G→A	34.5%	G197S (GGT→AGT)	mppA →	murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit
RA	924,732	T→C	14.5%	N522N (AAT→AAC)	mppA →	murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit
RA	927,449	C→T	36.8%	R82H (CGC→CAC)	narZ ←	nitrate reductase 2 (NRZ), alpha subunit
RA	931,645	T→C	31.1%	I191V (ATA→GTA)	yddG ←	predicted methyl viologen efflux pump
RA	931,721	A→G	31.5%	N165N (AAT→AAC)	yddG ←	predicted methyl viologen efflux pump
RA	931,730	G→A	31.9%	R162R (CGC→CGT)	yddG ←	predicted methyl viologen efflux pump
RA	932,920	T→C	63.7%	A139A (GCT→GCC)	fdnG →	formate dehydrogenase‑N, alpha subunit, nitrate‑inducible
RA	934,499	T→G	50.6%	S666A (TCC→GCC)	fdnG →	formate dehydrogenase‑N, alpha subunit, nitrate‑inducible
RA	934,504	A→G	50.6%	E667E (GAA→GAG)	fdnG →	formate dehydrogenase‑N, alpha subunit, nitrate‑inducible
RA	935,197	C→G	49.5%	T898T (ACC→ACG)	fdnG →	formate dehydrogenase‑N, alpha subunit, nitrate‑inducible
RA	936,253	C→T	36.1%	H230H (CAC→CAT)	fdnH →	formate dehydrogenase‑N, Fe‑S (beta) subunit, nitrate‑inducible
RA	936,797	G→A	22.1%	S119S (TCG→TCA)	fdnI →	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible
RA	936,833	G→A	34.0%	G131G (GGG→GGA)	fdnI →	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible
RA	937,004	A→G	37.5%	V188V (GTA→GTG)	fdnI →	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible
RA	938,456	C→T	28.6%	G162G (GGG→GGA)	adhP ←	alcohol dehydrogenase, 1‑propanol preferring
RA	940,401	G→A	44.6%	G124G (GGC→GGT)	sfcA ←	malate dehydrogenase, NAD‑requiring
RA	940,715	G→A	39.2%	L20L (CTG→TTG)	sfcA ←	malate dehydrogenase, NAD‑requiring
RA	941,252	A→C	29.9%	V44V (GTT→GTG)	bdm ←	biofilm‑dependent modulation protein
RA	942,074	G→T	31.8%	G116V (GGC→GTC)	osmC →	osmotically inducible, stress‑inducible membrane protein
RA	942,078	A→T	41.0%	I117I (ATA→ATT)	osmC →	osmotically inducible, stress‑inducible membrane protein
RA	942,108	C→T	33.6%	V127V (GTC→GTT)	osmC →	osmotically inducible, stress‑inducible membrane protein
RA	948,926	C→A	30.6%	S637S (TCG→TCT)	dos ←	cAMP phosphodiesterase, heme‑regulated
RA	948,935	C→A	35.3%	V634V (GTG→GTT)	dos ←	cAMP phosphodiesterase, heme‑regulated
RA	949,625	G→C	30.0%	P404P (CCC→CCG)	dos ←	cAMP phosphodiesterase, heme‑regulated
RA	950,075	A→G	21.6%	I254I (ATT→ATC)	dos ←	cAMP phosphodiesterase, heme‑regulated
RA	950,078	C→T	19.0%	Q253Q (CAG→CAA)	dos ←	cAMP phosphodiesterase, heme‑regulated
RA	950,083	G→T	19.2%	R252R (CGG→AGG)	dos ←	cAMP phosphodiesterase, heme‑regulated
RA	950,105	A→T	27.0%	T244T (ACT→ACA)	dos ←	cAMP phosphodiesterase, heme‑regulated
RA	958,752	C→A	60.5%	A518A (GCG→GCT)	pqqL ←	predicted peptidase
RA	959,697	A→G	35.9%	T203T (ACT→ACC)	pqqL ←	predicted peptidase
RA	961,630	T→A	44.8%	T365S (ACA→TCA)	yddB ←	predicted porin protein
RA	964,104	C→G	42.0%	R114R (CGG→CGC)	yddA ←	fused predicted multidrug transporter subunits and membrane component and ATP‑binding component of ABC superfamily
RA	974,805	G→T	56.2%	intergenic (+557/+435)	lsrB → / ← ydeH	AI2 transporter/conserved hypothetical protein
RA	975,534	C→T	35.0%	V27V (GTG→GTA)	ydeH ←	conserved hypothetical protein
RA	977,104	T→C	37.5%	I681V (ATA→GTA)	dcp ←	dipeptidyl carboxypeptidase II
RA	977,140	T→G	35.9%	K669Q (AAG→CAG)	dcp ←	dipeptidyl carboxypeptidase II
RA	977,516	G→A	20.6%	N543N (AAC→AAT)	dcp ←	dipeptidyl carboxypeptidase II
RA	977,525	G→A	18.3%	S540S (AGC→AGT)	dcp ←	dipeptidyl carboxypeptidase II
RA	977,549	C→A	28.8%	L532L (CTG→CTT)	dcp ←	dipeptidyl carboxypeptidase II
RA	978,086	C→T	35.8%	E353E (GAG→GAA)	dcp ←	dipeptidyl carboxypeptidase II
RA	978,092	A→G	35.8%	L351L (CTT→CTC)	dcp ←	dipeptidyl carboxypeptidase II
RA	978,098	A→G	35.8%	F349F (TTT→TTC)	dcp ←	dipeptidyl carboxypeptidase II
RA	978,107	C→A	42.3%	R346R (CGG→CGT)	dcp ←	dipeptidyl carboxypeptidase II
RA	978,110	C→T	42.4%	R345R (CGG→CGA) ‡	dcp ←	dipeptidyl carboxypeptidase II
RA	978,112	G→T	42.4%	R345R (CGG→AGG) ‡	dcp ←	dipeptidyl carboxypeptidase II
RA	978,119	T→C	56.1%	E342E (GAA→GAG)	dcp ←	dipeptidyl carboxypeptidase II
RA	978,122	C→G	56.0%	A341A (GCG→GCC)	dcp ←	dipeptidyl carboxypeptidase II
RA	984,541	C→T	60.5%	S203N (AGT→AAT)	ynfC ←	hypothetical protein
RA	984,663	G→A	39.1%	D162D (GAC→GAT)	ynfC ←	hypothetical protein
RA	984,696	A→C	13.1%	G151G (GGT→GGG)	ynfC ←	hypothetical protein
RA	985,963	A→G	60.7%	L68L (CTA→CTG)	ynfE →	oxidoreductase subunit
RA	986,248	C→T	38.6%	I163I (ATC→ATT)	ynfE →	oxidoreductase subunit
RA	986,275	G→T	28.4%	S172S (TCG→TCT)	ynfE →	oxidoreductase subunit
RA	986,986	C→T	35.9%	G409G (GGC→GGT)	ynfE →	oxidoreductase subunit
RA	987,016	A→C	42.1%	I419I (ATA→ATC)	ynfE →	oxidoreductase subunit
RA	987,023	C→T	43.2%	L422L (CTG→TTG)	ynfE →	oxidoreductase subunit
RA	992,778	A→G	28.2%	L194L (TTA→TTG)	dmsD →	twin‑argninine leader‑binding protein for DmsA and TorA
RA	994,037	C→A	45.9%	F344L (TTC→TTA)	clcB →	predicted voltage‑gated chloride channel
RA	994,058	A→G	52.2%	T351T (ACA→ACG)	clcB →	predicted voltage‑gated chloride channel
RA	994,518	T→C	22.9%	V131V (GTA→GTG)	ynfK ←	predicted dethiobiotin synthetase
RA	994,533	T→C	24.6%	P126P (CCA→CCG)	ynfK ←	predicted dethiobiotin synthetase
RA	995,650	T→A	40.0%	A202A (GCA→GCT)	dgsA ←	DNA‑binding transcriptional repressor
RA	996,736	T→C	42.4%	N183S (AAT→AGT)	ynfL ←	predicted DNA‑binding transcriptional regulator
RA	997,014	A→G	73.5%	G90G (GGT→GGC)	ynfL ←	predicted DNA‑binding transcriptional regulator
RA	997,102	G→T	100%	A61E (GCA→GAA)	ynfL ←	predicted DNA‑binding transcriptional regulator
RA	997,128	T→C	100%	R52R (CGA→CGG)	ynfL ←	predicted DNA‑binding transcriptional regulator
RA	997,557	G→A	40.1%	Q56Q (CAG→CAA)	ynfM →	predicted transporter
RA	997,578	G→A	37.9%	S63S (TCG→TCA)	ynfM →	predicted transporter
RA	997,581	G→A	38.4%	Q64Q (CAG→CAA)	ynfM →	predicted transporter
RA	997,596	C→G	42.1%	T69T (ACC→ACG)	ynfM →	predicted transporter
RA	998,295	G→A	49.2%	G302G (GGG→GGA)	ynfM →	predicted transporter
RA	998,298	T→C	38.3%	R303R (CGT→CGC)	ynfM →	predicted transporter
RA	998,304	A→G	36.7%	P305P (CCA→CCG)	ynfM →	predicted transporter
RA	999,500	G→T	31.5%	intergenic (+125/‑151)	asr → / → ydgD	acid shock‑inducible periplasmic protein/predicted peptidase
RA	1,000,073	C→T	50.0%	A141A (GCC→GCT)	ydgD →	predicted peptidase
RA	1,000,091	A→T	52.8%	G147G (GGA→GGT)	ydgD →	predicted peptidase
RA	1,004,373	G→A	100%	L408L (CTG→TTG)	pntA ←	pyridine nucleotide transhydrogenase, alpha subunit
RA	1,004,409	T→C	57.2%	T396A (ACC→GCC)	pntA ←	pyridine nucleotide transhydrogenase, alpha subunit
RA	1,005,190	G→A	32.1%	N135N (AAC→AAT)	pntA ←	pyridine nucleotide transhydrogenase, alpha subunit
RA	1,006,546	G→A	23.2%	A143A (GCG→GCA)	ydgH →	hypothetical protein
RA	1,008,927	T→C	34.7%	S87S (AGT→AGC)	folM →	dihydrofolate reductase isozyme
RA	1,008,951	T→A	26.6%	G95G (GGT→GGA)	folM →	dihydrofolate reductase isozyme
RA	1,008,961	G→A	20.2%	A99T (GCC→ACC)	folM →	dihydrofolate reductase isozyme
RA	1,010,065	T→C	35.8%	S75S (TCT→TCC)	rstA →	DNA‑bindng response regulator in two‑component regulatory system with RstB
RA	1,010,641	T→C	43.5%	V23V (GTT→GTC)	rstB →	sensory histidine kinase in two‑component regulatory system with RstA
RA	1,011,495	T→C	16.5%	V308A (GTG→GCG)	rstB →	sensory histidine kinase in two‑component regulatory system with RstA
RA	1,011,820	C→T	21.5%	R416R (CGC→CGT)	rstB →	sensory histidine kinase in two‑component regulatory system with RstA
RA	1,013,728	A→G	37.5%	I184I (ATT→ATC)	fumC ←	fumarate hydratase (fumarase C), aerobic Class II
RA	1,015,874	C→A	68.8%	A65A (GCG→GCT)	fumA ←	aerobic Class I fumarate hydratase
RA	1,015,889	G→A	63.3%	F60F (TTC→TTT)	fumA ←	aerobic Class I fumarate hydratase
RA	1,015,892	C→T	63.3%	S59S (TCG→TCA)	fumA ←	aerobic Class I fumarate hydratase
RA	1,016,905	G→A	32.3%	P213P (CCG→CCA)	manA →	mannose‑6‑phosphate isomerase
RA	1,017,067	A→G	71.6%	A267A (GCA→GCG)	manA →	mannose‑6‑phosphate isomerase
RA	1,017,320	T→C	100%	L352L (TTG→CTG)	manA →	mannose‑6‑phosphate isomerase
RA	1,017,325	G→T	100%	W353C (TGG→TGT)	manA →	mannose‑6‑phosphate isomerase
RA	1,018,961	T→C	16.5%	N473N (AAT→AAC)	ydgA →	conserved hypothetical protein
RA	1,018,974	T→C	28.0%	S478P (TCG→CCG) ‡	ydgA →	conserved hypothetical protein
RA	1,018,976	G→A	27.9%	S478S (TCG→TCA) ‡	ydgA →	conserved hypothetical protein
RA	1,018,977	T→C	28.0%	L479L (TTA→CTA) ‡	ydgA →	conserved hypothetical protein
RA	1,018,979	A→G	29.0%	L479L (TTA→TTG) ‡	ydgA →	conserved hypothetical protein
RA	1,020,036	A→G	57.2%	D169D (GAT→GAC)	uidC ←	predicted outer membrane porin protein
RA	1,020,048	T→C	66.8%	T165T (ACA→ACG)	uidC ←	predicted outer membrane porin protein
RA	1,020,061	T→C	37.5%	Y161C (TAT→TGT)	uidC ←	predicted outer membrane porin protein
RA	1,020,221	C→T	50.0%	A108T (GCC→ACC)	uidC ←	predicted outer membrane porin protein
RA	1,020,261	A→G	30.9%	S94S (AGT→AGC)	uidC ←	predicted outer membrane porin protein
RA	1,022,353	T→A	50.5%	G470G (GGA→GGT)	uidA ←	beta‑D‑glucuronidase
RA	1,023,466	G→T	43.2%	V99V (GTC→GTA)	uidA ←	beta‑D‑glucuronidase
RA	1,025,024	C→G	46.7%	A236A (GCG→GCC)	hdhA ←	7alpha‑hydroxysteroid dehydrogenase, NAD‑dependent
RA	1,025,485	T→C	40.9%	I83V (ATC→GTC)	hdhA ←	7alpha‑hydroxysteroid dehydrogenase, NAD‑dependent
RA	1,025,486	A→G	40.9%	A82A (GCT→GCC)	hdhA ←	7alpha‑hydroxysteroid dehydrogenase, NAD‑dependent
RA	1,026,083	G→C	46.2%	L263L (CTC→CTG)	malI ←	DNA‑binding transcriptional repressor
RA	1,028,197	C→T	29.6%	F384F (TTC→TTT)	malX →	fused maltose and glucose‑specific PTS enzyme IIBC components
RA	1,029,310	T→G	62.5%	A221A (GCT→GCG)	malY →	bifunctional beta‑cystathionase, PLP‑dependent and regulator of maltose regulon
RA	1,031,911	T→A	42.6%	Q30L (CAG→CTG)	ydgJ ←	predicted oxidoreductase
RA	1,036,647	G→A	35.7%	V680I (GTT→ATT)	rsxC →	fused predicted 4Fe‑4S ferredoxin‑type protein
RA	1,036,664	T→C	38.0%	A685A (GCT→GCC)	rsxC →	fused predicted 4Fe‑4S ferredoxin‑type protein
RA	1,036,685	A→C	41.4%	A692A (GCA→GCC)	rsxC →	fused predicted 4Fe‑4S ferredoxin‑type protein
RA	1,037,015	A→C	29.3%	V61V (GTA→GTC)	rsxD →	predicted inner membrane oxidoreductase
RA	1,037,041	C→T	10.7%	A70V (GCC→GTC) ‡	rsxD →	predicted inner membrane oxidoreductase
RA	1,037,042	C→T	39.5%	A70A (GCC→GCT) ‡	rsxD →	predicted inner membrane oxidoreductase
RA	1,037,993	G→A	100%	T33T (ACG→ACA)	rsxG →	predicted oxidoreductase
RA	1,039,558	C→T	38.7%	P115P (CCC→CCT)	nth →	DNA glycosylase and apyrimidinic (AP) lyase
RA	1,039,561	C→T	41.2%	G116G (GGC→GGT)	nth →	DNA glycosylase and apyrimidinic (AP) lyase
RA	1,041,332	G→T	27.7%	L291L (CTG→CTT)	ydgR →	predicted transporter
RA	1,041,335	C→T	31.3%	Y292Y (TAC→TAT)	ydgR →	predicted transporter
RA	1,042,145	C→G	64.0%	T26T (ACC→ACG)	gst →	glutathionine S‑transferase
RA	1,042,223	G→A	100%	V52V (GTG→GTA)	gst →	glutathionine S‑transferase
RA	1,042,241	T→C	100%	D58D (GAT→GAC)	gst →	glutathionine S‑transferase
RA	1,044,247	G→A	28.6%	L223L (CTG→TTG)	tyrS ←	tyrosyl‑tRNA synthetase
RA	1,045,171	G→A	18.1%	S176S (AGC→AGT)	pdxH ←	pyridoxine 5'‑phosphate oxidase
RA	1,045,174	C→T	18.9%	P175P (CCG→CCA)	pdxH ←	pyridoxine 5'‑phosphate oxidase
RA	1,047,977	G→A	34.6%	P137P (CCG→CCA)	slyB →	outer membrane lipoprotein
RA	1,049,623	T→G	33.1%	V223V (GTT→GTG)	ydhJ →	undecaprenyl pyrophosphate phosphatase
RA	1,050,528	G→A	33.9%	A239A (GCG→GCA)	ydhK →	conserved inner membrane protein
RA	1,050,833	A→G	55.8%	H341R (CAT→CGT)	ydhK →	conserved inner membrane protein
RA	1,050,835	A→G	55.8%	T342A (ACC→GCC)	ydhK →	conserved inner membrane protein
RA	1,051,975	A→C	26.5%	A124A (GCT→GCG)	sodC ←	superoxide dismutase, Cu, Zn
RA	1,051,978	T→C	25.5%	K123K (AAA→AAG)	sodC ←	superoxide dismutase, Cu, Zn
RA	1,052,805	C→T	13.6%	P173P (CCG→CCA)	ydhF ←	predicted oxidoreductase
RA	1,052,811	A→G	13.5%	R171R (CGT→CGC)	ydhF ←	predicted oxidoreductase
RA	1,052,826	G→C	13.6%	A166A (GCC→GCG)	ydhF ←	predicted oxidoreductase
RA	1,052,841	C→T	12.5%	T161T (ACG→ACA)	ydhF ←	predicted oxidoreductase
RA	1,053,033	A→G	27.9%	G97G (GGT→GGC)	ydhF ←	predicted oxidoreductase
RA	1,053,053	G→A	22.7%	R91C (CGT→TGT)	ydhF ←	predicted oxidoreductase
RA	1,053,407	A→G	38.5%	S69P (TCA→CCA)	ydhL ←	conserved hypothetical protein
RA	1,053,421	G→A	44.7%	A64V (GCA→GTA)	ydhL ←	conserved hypothetical protein
RA	1,053,423	G→A	44.1%	R63R (CGC→CGT)	ydhL ←	conserved hypothetical protein
RA	1,053,813	T→C	32.7%	L6L (TTA→CTA) ‡	ydhM →	predicted DNA‑binding transcriptional regulator
RA	1,053,815	A→C	31.1%	L6F (TTA→TTC) ‡	ydhM →	predicted DNA‑binding transcriptional regulator
RA	1,063,766	T→C	29.9%	intergenic (+116/+46)	sodB → / ← ydhP	superoxide dismutase, Fe/predicted transporter
RA	1,063,821	A→G	32.6%	A387A (GCT→GCC)	ydhP ←	predicted transporter
RA	1,065,177	T→C	24.2%	intergenic (‑196/‑358)	ydhP ← / → purR	predicted transporter/DNA‑binding transcriptional repressor, hypoxanthine‑binding
RA	1,066,835	C→G	42.2%	V219L (GTT→CTT)	ydhB ←	predicted DNA‑binding transcriptional regulator
RA	1,068,429	G→A	55.2%	V276V (GTG→GTA)	ydhC →	predicted transporter
RA	1,069,145	C→T	29.4%	D14D (GAC→GAT)	cfa →	cyclopropane fatty acyl phospholipid synthase
RA	1,071,798	C→G	47.2%	S217S (TCC→TCG)	mdtK →	multidrug efflux system transporter
RA	1,071,831	A→G	54.3%	A228A (GCA→GCG)	mdtK →	multidrug efflux system transporter
RA	1,071,834	A→G	53.8%	K229K (AAA→AAG)	mdtK →	multidrug efflux system transporter
RA	1,074,351	T→C	39.1%	intergenic (+68/‑40)	valW → / → ydhR	tRNA‑Val/hypothetical protein
RA	1,075,721	T→C	49.3%	S300S (AGT→AGC)	ydhS →	conserved hypothetical protein with FAD/NAD(P)‑binding domain
RA	1,076,180	C→T	29.0%	I453I (ATC→ATT)	ydhS →	conserved hypothetical protein with FAD/NAD(P)‑binding domain
RA	1,076,192	G→A	29.0%	G457G (GGG→GGA)	ydhS →	conserved hypothetical protein with FAD/NAD(P)‑binding domain
RA	1,080,838	A→G	28.5%	I228I (ATT→ATC)	ydhV ←	predicted oxidoreductase
RA	1,080,862	A→G	39.3%	N220N (AAT→AAC)	ydhV ←	predicted oxidoreductase
RA	1,082,519	T→C	34.6%	intergenic (‑351/+104)	ydhY ← / ← ydhZ	predicted 4Fe‑4S ferridoxin‑type protein/hypothetical protein
RA	1,082,530	G→A	13.4%	intergenic (‑362/+93)	ydhY ← / ← ydhZ	predicted 4Fe‑4S ferridoxin‑type protein/hypothetical protein
RA	1,087,357	A→G	47.2%	G286G (GGT→GGC)	sufS ←	selenocysteine lyase, PLP‑dependent
RA	1,087,363	G→A	54.1%	I284I (ATC→ATT)	sufS ←	selenocysteine lyase, PLP‑dependent
RA	1,087,366	G→A	54.1%	G283G (GGC→GGT)	sufS ←	selenocysteine lyase, PLP‑dependent
RA	1,087,369	C→T	51.5%	G282G (GGG→GGA)	sufS ←	selenocysteine lyase, PLP‑dependent
RA	1,090,837	A→G	45.0%	F288F (TTT→TTC)	sufB ←	component of SufBCD complex
RA	1,090,843	G→A	45.0%	N286N (AAC→AAT)	sufB ←	component of SufBCD complex
RA	1,091,278	C→T	33.2%	A141A (GCG→GCA)	sufB ←	component of SufBCD complex
RA	1,091,823	C→A	38.2%	P85P (CCG→CCT)	sufA ←	Fe‑S cluster assembly protein
RA	1,092,045	T→C	33.6%	Q11Q (CAA→CAG)	sufA ←	Fe‑S cluster assembly protein
RA	1,092,051	G→A	33.6%	N9N (AAC→AAT)	sufA ←	Fe‑S cluster assembly protein
RA	1,094,838	G→A	23.7%	F513F (TTC→TTT)	ydiJ ←	predicted FAD‑linked oxidoreductase
RA	1,094,979	C→T	60.9%	A466A (GCG→GCA)	ydiJ ←	predicted FAD‑linked oxidoreductase
RA	1,096,275	A→G	57.0%	S34S (AGT→AGC)	ydiJ ←	predicted FAD‑linked oxidoreductase
RA	1,097,286	T→C	39.5%	S174S (AGT→AGC)	ydiK →	predicted inner membrane protein
RA	1,099,401	A→T	51.9%	T214S (ACC→TCC)	ydiM →	predicted transporter
RA	1,099,404	T→C	48.3%	L215L (TTA→CTA)	ydiM →	predicted transporter
RA	1,100,307	T→C	51.4%	N35N (AAT→AAC)	ydiN →	predicted transporter
RA	1,100,311	T→A	47.5%	S37T (TCA→ACA)	ydiN →	predicted transporter
RA	1,100,317	C→T	49.3%	L39L (CTG→TTG)	ydiN →	predicted transporter
RA	1,100,322	G→A	50.0%	A40A (GCG→GCA)	ydiN →	predicted transporter
RA	1,100,643	T→C	20.0%	F147F (TTT→TTC)	ydiN →	predicted transporter
RA	1,106,393	T→C	63.0%	E200E (GAA→GAG)	ydiP ←	predicted DNA‑binding transcriptional regulator
RA	1,112,816	C→T	81.3%	R663H (CGT→CAT)	pps ←	phosphoenolpyruvate synthase
RA	1,112,827	T→C	78.4%	E659E (GAA→GAG)	pps ←	phosphoenolpyruvate synthase
RA	1,112,851	T→A	68.3%	V651V (GTA→GTT)	pps ←	phosphoenolpyruvate synthase
RA	1,113,349	T→C	42.5%	K485K (AAA→AAG)	pps ←	phosphoenolpyruvate synthase
RA	1,113,361	A→G	41.9%	D481D (GAT→GAC)	pps ←	phosphoenolpyruvate synthase
RA	1,114,039	G→A	51.6%	I255I (ATC→ATT)	pps ←	phosphoenolpyruvate synthase
RA	1,114,060	C→A	45.7%	L248L (CTG→CTT)	pps ←	phosphoenolpyruvate synthase
RA	1,114,225	T→C	33.3%	Q193Q (CAA→CAG)	pps ←	phosphoenolpyruvate synthase
RA	1,114,246	C→T	35.0%	V186V (GTG→GTA)	pps ←	phosphoenolpyruvate synthase
RA	1,114,249	A→G	35.0%	G185G (GGT→GGC)	pps ←	phosphoenolpyruvate synthase
RA	1,114,255	G→A	39.1%	H183H (CAC→CAT)	pps ←	phosphoenolpyruvate synthase
RA	1,116,827	C→T	47.8%	G234G (GGC→GGT)	aroH →	3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tryptophan repressible
RA	1,117,194	A→G	54.8%	intergenic (+22/‑110)	aroH → / → ydiE	3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tryptophan repressible/conserved hypothetical protein
RA	1,119,187	G→A	62.9%	H175H (CAC→CAT)	ydiV ←	conserved hypothetical protein
RA	1,119,719	G→T	49.1%	intergenic (‑8/+239)	ydiV ← / ← nlpC	conserved hypothetical protein/predicted lipoprotein
RA	1,120,174	T→C	25.8%	K83K (AAA→AAG)	nlpC ←	predicted lipoprotein
RA	1,121,626	T→C	58.0%	M59V (ATG→GTG)	btuE ←	predicted glutathione peroxidase
RA	1,121,633	T→A	47.7%	R56R (CGA→CGT)	btuE ←	predicted glutathione peroxidase
RA	1,121,639	G→A	47.7%	V54V (GTC→GTT) ‡	btuE ←	predicted glutathione peroxidase
RA	1,121,640	A→G	48.4%	V54A (GTC→GCC) ‡	btuE ←	predicted glutathione peroxidase
RA	1,124,414	G→A	50.0%	L408L (CTA→TTA)	pheT ←	phenylalanine tRNA synthetase, beta subunit
RA	1,125,092	G→A	35.5%	L182L (CTG→TTG)	pheT ←	phenylalanine tRNA synthetase, beta subunit
RA	1,125,105	A→G	54.8%	R177R (CGT→CGC)	pheT ←	phenylalanine tRNA synthetase, beta subunit
RA	1,125,241	C→T	42.8%	S132N (AGC→AAC)	pheT ←	phenylalanine tRNA synthetase, beta subunit
RA	1,125,243	G→A	45.6%	H131H (CAC→CAT)	pheT ←	phenylalanine tRNA synthetase, beta subunit
RA	1,125,258	G→T	46.5%	G126G (GGC→GGA)	pheT ←	phenylalanine tRNA synthetase, beta subunit
RA	1,125,264	T→C	57.8%	E124E (GAA→GAG)	pheT ←	phenylalanine tRNA synthetase, beta subunit
RA	1,125,725	A→G	48.9%	T303T (ACT→ACC)	pheS ←	phenylalanine tRNA synthetase, alpha subunit
RA	1,126,307	A→C	71.5%	V109V (GTT→GTG)	pheS ←	phenylalanine tRNA synthetase, alpha subunit
RA	1,126,319	A→C	75.7%	G105G (GGT→GGG)	pheS ←	phenylalanine tRNA synthetase, alpha subunit
RA	1,126,343	T→C	77.7%	P97P (CCA→CCG)	pheS ←	phenylalanine tRNA synthetase, alpha subunit
RA	1,126,349	A→G	77.6%	S95S (TCT→TCC)	pheS ←	phenylalanine tRNA synthetase, alpha subunit
RA	1,126,684	T→C	61.7%	intergenic (‑51/+233)	pheS ← / ← pheM	phenylalanine tRNA synthetase, alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide
RA	1,130,079	G→A	42.6%	T61T (ACC→ACT)	thrS ←	threonyl‑tRNA synthetase
RA	1,130,566	G→A	25.2%	intergenic (‑305/‑219)	thrS ← / → arpB	threonyl‑tRNA synthetase/ECK1718:JW5278:b1720; hypothetical protein, N‑ter fragment
RA	1,130,923	G→T	31.9%	pseudogene (139/474 nt) pseudogene (139/1900 nt)	arpB → arpB →	ECK1718:JW5278:b1720; hypothetical protein, N‑ter fragment ECK1718:JW5278+JW1710:b4494; hypothetical protein
RA	1,130,925	C→T	36.7%	pseudogene (141/474 nt) pseudogene (141/1900 nt)	arpB → arpB →	ECK1718:JW5278:b1720; hypothetical protein, N‑ter fragment ECK1718:JW5278+JW1710:b4494; hypothetical protein
RA	1,133,307	T→A	51.0%	P156P (CCA→CCT)	ydiY ←	conserved hypothetical protein
RA	1,133,310	A→G	52.2%	G155G (GGT→GGC)	ydiY ←	conserved hypothetical protein
RA	1,133,571	G→A	28.4%	T68T (ACC→ACT)	ydiY ←	conserved hypothetical protein
RA	1,134,852	G→T	48.7%	L264L (CTG→CTT)	pfkB →	6‑phosphofructokinase II
RA	1,134,888	T→C	40.6%	V276V (GTT→GTC)	pfkB →	6‑phosphofructokinase II
RA	1,134,927	T→C	29.1%	N289N (AAT→AAC)	pfkB →	6‑phosphofructokinase II
RA	1,134,939	T→C	26.7%	R293R (CGT→CGC)	pfkB →	6‑phosphofructokinase II
RA	1,134,975	T→G	50.1%	A305A (GCT→GCG)	pfkB →	6‑phosphofructokinase II
RA	1,135,605	A→G	28.9%	H40R (CAT→CGT)	yniA →	predicted phosphotransferase/kinase
RA	1,137,810	T→C	31.9%	intergenic (+71/‑92)	yniC → / → ydjM	predicted hydrolase/predicted inner membrane protein regulated by LexA
RA	1,138,447	G→A	36.8%	L182L (TTG→TTA)	ydjM →	predicted inner membrane protein regulated by LexA
RA	1,138,871	T→C	36.2%	L83L (TTA→CTA)	ydjN →	predicted transporter
RA	1,139,074	T→C	41.1%	I150I (ATT→ATC)	ydjN →	predicted transporter
RA	1,139,906	T→C	100%	L428L (TTA→CTA)	ydjN →	predicted transporter
RA	1,141,923	T→C	50.0%	I122I (ATT→ATC)	katE →	hydroperoxidase HPII(III)
RA	1,143,119	G→A	39.9%	R521H (CGC→CAC)	katE →	hydroperoxidase HPII(III)
RA	1,143,159	C→A	24.5%	V534V (GTC→GTA)	katE →	hydroperoxidase HPII(III)
RA	1,145,600	A→G	36.4%	L198L (TTG→CTG)	chbF ←	cryptic phospho‑beta‑glucosidase, NAD(P)‑binding
RA	1,146,056	G→C	23.8%	P46A (CCG→GCG)	chbF ←	cryptic phospho‑beta‑glucosidase, NAD(P)‑binding
RA	1,149,753	G→A	14.4%	R65R (CGC→CGT)	osmE ←	DNA‑binding transcriptional regulator
RA	1,153,175	G→C	36.0%	Q48E (CAG→GAG)	spy ←	envelope stress induced periplasmic protein
RA	1,153,197	G→A	42.8%	H40H (CAC→CAT)	spy ←	envelope stress induced periplasmic protein
RA	1,153,806	C→T	70.1%	S270N (AGT→AAT)	astE ←	succinylglutamate desuccinylase
RA	1,154,279	T→C	39.2%	L112L (CTA→CTG)	astE ←	succinylglutamate desuccinylase
RA	1,154,282	C→T	39.1%	Q111Q (CAG→CAA)	astE ←	succinylglutamate desuccinylase
RA	1,155,561	G→A	52.2%	A130A (GCC→GCT)	astB ←	succinylarginine dihydrolase
RA	1,155,567	G→A	48.6%	T128T (ACC→ACT)	astB ←	succinylarginine dihydrolase
RA	1,156,730	G→A	56.8%	L232L (CTC→CTT)	astD ←	succinylglutamic semialdehyde dehydrogenase
RA	1,156,744	A→G	44.1%	L228L (TTG→CTG)	astD ←	succinylglutamic semialdehyde dehydrogenase
RA	1,156,754	T→G	40.6%	T224T (ACA→ACC)	astD ←	succinylglutamic semialdehyde dehydrogenase
RA	1,156,766	A→G	41.9%	G220G (GGT→GGC)	astD ←	succinylglutamic semialdehyde dehydrogenase
RA	1,157,473	G→T	64.3%	A328A (GCC→GCA)	astA ←	arginine succinyltransferase
RA	1,160,787	C→T	29.4%	N223N (AAC→AAT)	xthA →	exonuclease III
RA	1,160,790	T→C	24.9%	R224R (CGT→CGC)	xthA →	exonuclease III
RA	1,161,118	T→A	32.6%	F9L (TTT→TTA)	ydjX →	predicted inner membrane protein
RA	1,161,857	T→C	37.5%	C17C (TGT→TGC)	ydjY →	hypothetical protein
RA	1,162,506	T→A	48.8%	M3K (ATG→AAG)	ydjZ →	conserved inner membrane protein
RA	1,162,897	G→A	24.2%	V133V (GTG→GTA)	ydjZ →	conserved inner membrane protein
RA	1,168,168	C→A	26.8%	G337G (GGC→GGA)	ynjE →	predicted thiosulfate sulfur transferase
RA	1,168,456	T→C	24.2%	S433S (AGT→AGC)	ynjE →	predicted thiosulfate sulfur transferase
RA	1,168,459	C→T	25.9%	S434S (AGC→AGT)	ynjE →	predicted thiosulfate sulfur transferase
RA	1,168,929	C→T	47.8%	V56I (GTC→ATC)	ynjF ←	predicted phosphatidyl transferase, inner membrane protein
RA	1,170,030	C→T	41.9%	intergenic (‑204/‑32)	ynjH ← / → gdhA	hypothetical protein/glutamate dehydrogenase, NADP‑specific
RA	1,170,190	A→C	30.4%	P43P (CCA→CCC)	gdhA →	glutamate dehydrogenase, NADP‑specific
RA	1,170,199	C→T	48.5%	R46R (CGC→CGT)	gdhA →	glutamate dehydrogenase, NADP‑specific
RA	1,174,382	C→G	67.1%	R90R (CGG→CGC) ‡	topB ←	DNA topoisomerase III
RA	1,174,383	C→T	67.1%	R90Q (CGG→CAG) ‡	topB ←	DNA topoisomerase III
RA	1,174,394	G→A	74.1%	N86N (AAC→AAT)	topB ←	DNA topoisomerase III
RA	1,174,406	G→A	63.3%	T82T (ACC→ACT)	topB ←	DNA topoisomerase III
RA	1,176,179	T→C	40.6%	E63E (GAA→GAG)	ydjA ←	predicted oxidoreductase
RA	1,176,188	G→A	48.4%	A60A (GCC→GCT)	ydjA ←	predicted oxidoreductase
RA	1,177,103	G→A	50.0%	L192L (TTG→TTA)	sppA →	protease IV
RA	1,177,523	T→C	19.6%	F332F (TTT→TTC)	sppA →	protease IV
RA	1,178,820	C→T	50.0%	G90G (GGC→GGT)	ansA →	cytoplasmic L‑asparaginase I
RA	1,178,823	C→A	45.7%	T91T (ACC→ACA)	ansA →	cytoplasmic L‑asparaginase I
RA	1,178,850	G→A	47.8%	A100A (GCG→GCA)	ansA →	cytoplasmic L‑asparaginase I
RA	1,178,979	G→T	32.8%	P143P (CCG→CCT)	ansA →	cytoplasmic L‑asparaginase I
RA	1,178,994	G→T	31.9%	T148T (ACG→ACT)	ansA →	cytoplasmic L‑asparaginase I
RA	1,179,174	C→G	56.6%	T208T (ACC→ACG)	ansA →	cytoplasmic L‑asparaginase I
RA	1,179,177	A→G	74.7%	P209P (CCA→CCG)	ansA →	cytoplasmic L‑asparaginase I
RA	1,181,303	A→G	46.6%	H109R (CAT→CGT)	yeaD →	conserved hypothetical protein
RA	1,182,072	C→T	53.6%	V231V (GTG→GTA)	yeaE ←	predicted oxidoreductase
RA	1,182,099	G→A	56.7%	S222S (AGC→AGT)	yeaE ←	predicted oxidoreductase
RA	1,182,950	T→C	42.8%	A217A (GCA→GCG)	mipA ←	scaffolding protein for murein synthesizing machinery
RA	1,182,954	G→A	41.2%	T216I (ACC→ATC)	mipA ←	scaffolding protein for murein synthesizing machinery
RA	1,182,974	G→A	44.0%	G209G (GGC→GGT)	mipA ←	scaffolding protein for murein synthesizing machinery
RA	1,184,938	A→C	41.4%	A301A (GCA→GCC)	yeaG →	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,184,950	G→A	40.5%	E305E (GAG→GAA)	yeaG →	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,186,871	A→G	24.2%	Q263Q (CAA→CAG)	yeaH →	conserved hypothetical protein
RA	1,190,401	G→A	61.0%	Q411Q (CAG→CAA)	yeaJ →	predicted diguanylate cyclase
RA	1,193,222	T→A	47.2%	V147V (GTA→GTT)	fadD ←	acyl‑CoA synthetase
RA	1,195,439	T→C	45.2%	P571P (CCA→CCG)	yoaA ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,195,442	T→C	40.0%	L570L (CTA→CTG)	yoaA ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,195,448	C→T	30.3%	V568V (GTG→GTA)	yoaA ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,195,481	A→G	24.4%	C557C (TGT→TGC)	yoaA ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,195,496	C→T	28.6%	A552A (GCG→GCA)	yoaA ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,202,586	G→A	51.4%	A82T (GCC→ACC)	yoaD →	predicted phosphodiesterase
RA	1,202,612	G→T	67.3%	A90A (GCG→GCT)	yoaD →	predicted phosphodiesterase
RA	1,203,338	G→A	34.9%	L332L (CTG→CTA)	yoaD →	predicted phosphodiesterase
RA	1,204,200	A→G	30.7%	D434D (GAT→GAC)	yoaE ←	fused predicted membrane proteins
RA	1,204,203	A→G	30.7%	T433T (ACT→ACC)	yoaE ←	fused predicted membrane proteins
RA	1,204,743	C→G	55.2%	L253L (CTG→CTC)	yoaE ←	fused predicted membrane proteins
RA	1,204,746	G→A	58.2%	I252I (ATC→ATT)	yoaE ←	fused predicted membrane proteins
RA	1,204,749	G→C	58.2%	A251A (GCC→GCG)	yoaE ←	fused predicted membrane proteins
RA	1,207,129	G→C	39.5%	G44G (GGG→GGC)	manY →	mannose‑specific enzyme IIC component of PTS
RA	1,207,231	T→C	43.8%	S78S (TCT→TCC)	manY →	mannose‑specific enzyme IIC component of PTS
RA	1,207,243	C→T	61.6%	T82T (ACC→ACT)	manY →	mannose‑specific enzyme IIC component of PTS
RA	1,209,598	A→G	41.1%	intergenic (+423/‑6)	yobD → / → yebN	conserved inner membrane protein/conserved inner membrane protein
RA	1,211,750	A→T	41.5%	intergenic (‑243/+427)	yobF ← / ← yebO	hypothetical protein/hypothetical protein
RA	1,214,890	A→G	100%	L233L (TTA→TTG)	yebQ →	predicted transporter
RA	1,215,319	A→G	41.1%	L376L (TTA→TTG)	yebQ →	predicted transporter
RA	1,217,488	G→C	45.4%	P415P (CCC→CCG)	prc ←	carboxy‑terminal protease for penicillin‑binding protein 3
RA	1,217,491	A→G	45.4%	G414G (GGT→GGC)	prc ←	carboxy‑terminal protease for penicillin‑binding protein 3
RA	1,217,494	C→G	44.8%	A413A (GCG→GCC) ‡	prc ←	carboxy‑terminal protease for penicillin‑binding protein 3
RA	1,217,496	C→A	44.7%	A413S (GCG→TCG) ‡	prc ←	carboxy‑terminal protease for penicillin‑binding protein 3
RA	1,217,497	A→T	44.8%	P412P (CCT→CCA)	prc ←	carboxy‑terminal protease for penicillin‑binding protein 3
RA	1,217,503	A→G	62.1%	F410F (TTT→TTC)	prc ←	carboxy‑terminal protease for penicillin‑binding protein 3
RA	1,217,545	G→A	100%	G396G (GGC→GGT)	prc ←	carboxy‑terminal protease for penicillin‑binding protein 3
RA	1,220,477	G→A	70.6%	V102I (GTT→ATT)	yebS →	conserved inner membrane protein
RA	1,220,863	T→C	22.8%	L230L (CTT→CTC)	yebS →	conserved inner membrane protein
RA	1,221,439	C→T	37.4%	N422N (AAC→AAT)  T5M (ACG→ATG)	yebS → yebT →	conserved inner membrane protein conserved hypothetical protein
RA	1,221,569	C→T	44.1%	T48T (ACC→ACT)	yebT →	conserved hypothetical protein
RA	1,222,865	G→A	42.0%	G480G (GGG→GGA)	yebT →	conserved hypothetical protein
RA	1,222,892	T→C	43.5%	G489G (GGT→GGC)	yebT →	conserved hypothetical protein
RA	1,223,717	G→A	31.7%	T764T (ACG→ACA)	yebT →	conserved hypothetical protein
RA	1,225,125	C→T	63.2%	F329F (TTC→TTT)	yebU →	predicted methyltransferase
RA	1,225,149	T→C	54.6%	A337A (GCT→GCC)	yebU →	predicted methyltransferase
RA	1,225,152	A→T	54.6%	G338G (GGA→GGT)	yebU →	predicted methyltransferase
RA	1,226,694	A→G	43.4%	C64C (TGT→TGC)	pphA ←	serine/threonine‑specific protein phosphatase 1
RA	1,228,040	A→G	100%	I156I (ATT→ATC)	yebZ ←	predicted inner membrane protein
RA	1,228,052	C→T	100%	A152A (GCG→GCA)	yebZ ←	predicted inner membrane protein
RA	1,229,092	C→A	29.4%	A23A (GCC→GCA)	holE →	DNA polymerase III, theta subunit
RA	1,230,359	T→A	40.9%	P108P (CCT→CCA)	exoX →	DNA exonuclease X
RA	1,230,983	G→A	32.7%	Y591Y (TAC→TAT)	ptrB ←	protease II
RA	1,230,986	C→T	30.3%	E590E (GAG→GAA)	ptrB ←	protease II
RA	1,231,268	T→A	43.5%	G496G (GGA→GGT)	ptrB ←	protease II
RA	1,231,274	T→C	37.3%	E494E (GAA→GAG)	ptrB ←	protease II
RA	1,231,400	A→G	58.0%	Y452Y (TAT→TAC)	ptrB ←	protease II
RA	1,231,598	G→A	64.7%	D386D (GAC→GAT)	ptrB ←	protease II
RA	1,231,607	A→G	64.9%	T383T (ACT→ACC)	ptrB ←	protease II
RA	1,231,616	A→C	55.5%	S380S (TCT→TCG)	ptrB ←	protease II
RA	1,235,894	G→A	67.8%	V366V (GTG→GTA)	purT →	phosphoribosylglycinamide formyltransferase 2
RA	1,238,257	T→C	28.5%	P88P (CCA→CCG)	edd ←	6‑phosphogluconate dehydratase
RA	1,238,281	C→A	31.9%	A80A (GCG→GCT)	edd ←	6‑phosphogluconate dehydratase
RA	1,238,425	A→G	43.5%	T32T (ACT→ACC)	edd ←	6‑phosphogluconate dehydratase
RA	1,238,977	C→T	37.2%	A418A (GCG→GCA)	zwf ←	glucose‑6‑phosphate dehydrogenase
RA	1,238,989	C→T	29.6%	Q414Q (CAG→CAA)	zwf ←	glucose‑6‑phosphate dehydrogenase
RA	1,238,998	G→A	32.7%	T411T (ACC→ACT)	zwf ←	glucose‑6‑phosphate dehydrogenase
RA	1,239,208	C→T	40.6%	L341L (CTG→CTA)	zwf ←	glucose‑6‑phosphate dehydrogenase
RA	1,241,927	C→T	19.0%	V121V (GTC→GTT)	pykA →	pyruvate kinase II
RA	1,242,341	C→T	31.1%	D259D (GAC→GAT)	pykA →	pyruvate kinase II
RA	1,244,760	A→T	41.8%	A264A (GCT→GCA)	yebA ←	predicted peptidase
RA	1,246,200	C→T	36.7%	K100K (AAG→AAA)	znuA ←	zinc transporter subunit
RA	1,246,332	G→C	27.7%	G56G (GGC→GGG)	znuA ←	zinc transporter subunit
RA	1,246,341	A→T	29.4%	L53L (CTT→CTA)	znuA ←	zinc transporter subunit
RA	1,246,353	T→C	33.3%	T49T (ACA→ACG)	znuA ←	zinc transporter subunit
RA	1,246,943	T→G	100%	S122S (TCT→TCG)	znuC →	zinc transporter subunit
RA	1,246,967	A→G	100%	L130L (CTA→CTG)	znuC →	zinc transporter subunit
RA	1,247,830	A→C	22.3%	R167R (CGA→CGC)	znuB →	zinc transporter subunit
RA	1,248,433	A→C	67.3%	P280P (CCT→CCG)	ruvB ←	ATP‑dependent DNA helicase, component of RuvABC resolvasome
RA	1,248,436	T→C	66.1%	G279G (GGA→GGG)	ruvB ←	ATP‑dependent DNA helicase, component of RuvABC resolvasome
RA	1,251,077	T→C	29.8%	A72A (GCA→GCG)	ruvC ←	component of RuvABC resolvasome, endonuclease
RA	1,251,089	T→C	24.4%	Q68Q (CAA→CAG)	ruvC ←	component of RuvABC resolvasome, endonuclease
RA	1,251,528	A→G	35.9%	G180G (GGT→GGC)	yebC ←	conserved hypothetical protein
RA	1,251,873	T→A	100%	T65T (ACA→ACT)	yebC ←	conserved hypothetical protein
RA	1,251,909	C→A	56.7%	V53V (GTG→GTT) ‡	yebC ←	conserved hypothetical protein
RA	1,251,911	C→T	56.7%	V53M (GTG→ATG) ‡	yebC ←	conserved hypothetical protein
RA	1,251,912	C→T	56.7%	A52A (GCG→GCA)	yebC ←	conserved hypothetical protein
RA	1,251,915	C→T	58.0%	A51A (GCG→GCA)	yebC ←	conserved hypothetical protein
RA	1,251,923	G→A	56.1%	L49L (CTG→TTG)	yebC ←	conserved hypothetical protein
RA	1,253,454	G→A	53.2%	L329L (CTG→TTG)	aspS ←	aspartyl‑tRNA synthetase
RA	1,253,473	G→A	54.1%	R322R (CGC→CGT)	aspS ←	aspartyl‑tRNA synthetase
RA	1,253,551	A→G	70.7%	A296A (GCT→GCC)	aspS ←	aspartyl‑tRNA synthetase
RA	1,253,560	A→G	69.4%	T293T (ACT→ACC)	aspS ←	aspartyl‑tRNA synthetase
RA	1,255,182	T→C	29.1%	L145L (CTT→CTC)	yecD →	predicted hydrolase
RA	1,255,185	C→T	26.0%	G146G (GGC→GGT)	yecD →	predicted hydrolase
RA	1,255,821	C→T	31.7%	H171Y (CAC→TAC)	yecE →	conserved hypothetical protein
RA	1,257,696	T→C	100%	R113R (CGT→CGC)	yecP →	predicted methyltransferase
RA	1,257,700	C→A	100%	L115M (CTG→ATG)	yecP →	predicted methyltransferase
RA	1,257,879	G→A	58.2%	A174A (GCG→GCA)	yecP →	predicted methyltransferase
RA	1,258,176	G→A	65.5%	A273A (GCG→GCA)	yecP →	predicted methyltransferase
RA	1,259,087	C→T	51.5%	V613I (GTT→ATT)	torZ ←	trimethylamine N‑oxide reductase system III, catalytic subunit
RA	1,259,163	A→C	54.9%	T587T (ACT→ACG)	torZ ←	trimethylamine N‑oxide reductase system III, catalytic subunit
RA	1,259,166	G→C	47.9%	V586V (GTC→GTG)	torZ ←	trimethylamine N‑oxide reductase system III, catalytic subunit
RA	1,259,181	G→C	45.1%	A581A (GCC→GCG)	torZ ←	trimethylamine N‑oxide reductase system III, catalytic subunit
RA	1,261,248	A→C	54.7%	T267T (ACT→ACG)	torY ←	TMAO reductase III (TorYZ), cytochrome c‑type subunit
RA	1,261,251	G→T	53.9%	L266L (CTC→CTA)	torY ←	TMAO reductase III (TorYZ), cytochrome c‑type subunit
RA	1,261,587	T→C	21.9%	A154A (GCA→GCG)	torY ←	TMAO reductase III (TorYZ), cytochrome c‑type subunit
RA	1,261,872	C→T	48.5%	S59S (TCG→TCA)	torY ←	TMAO reductase III (TorYZ), cytochrome c‑type subunit
RA	1,263,009	A→G	41.5%	I58I (ATT→ATC)	cutC ←	copper homeostasis protein
RA	1,263,012	T→A	40.2%	I57I (ATA→ATT)	cutC ←	copper homeostasis protein
RA	1,263,024	A→T	40.6%	P53P (CCT→CCA)	cutC ←	copper homeostasis protein
RA	1,266,325	A→C	37.0%	I154L (ATT→CTT)	tyrP →	tyrosine transporter
RA	1,266,328	T→C	36.2%	S155P (TCT→CCT)	tyrP →	tyrosine transporter
RA	1,266,337	T→A	37.6%	C158S (TGC→AGC)	tyrP →	tyrosine transporter
RA	1,266,364	T→A	61.0%	*167R (TGA→AGA)	tyrP →	tyrosine transporter
RA	1,266,733	T→G	39.3%	intergenic (+54/+8)	tyrP → / ← yecA	tyrosine transporter/conserved metal‑binding protein
RA	1,266,736	G→A	39.1%	intergenic (+57/+5)	tyrP → / ← yecA	tyrosine transporter/conserved metal‑binding protein
RA	1,266,786	G→A	45.6%	C207C (TGC→TGT)	yecA ←	conserved metal‑binding protein
RA	1,268,188	T→G	53.7%	A139A (GCA→GCC)	pgsA ←	phosphatidylglycerophosphate synthetase
RA	1,268,191	C→T	52.4%	L138L (TTG→TTA)	pgsA ←	phosphatidylglycerophosphate synthetase
RA	1,269,009	G→A	100%	R148C (CGT→TGT)	uvrC ←	excinuclease UvrABC, endonuclease subunit
RA	1,271,105	A→G	28.6%	V384V (GTT→GTC)	yedQ ←	predicted diguanylate cyclase
RA	1,272,913	C→T	55.9%	A231A (GCG→GCA)	yedI ←	conserved inner membrane protein
RA	1,274,978	A→G	25.8%	T97A (ACA→GCA)	yodA →	conserved metal‑binding protein
RA	1,274,991	A→G	31.3%	Q101R (CAA→CGA)	yodA →	conserved metal‑binding protein
RA	1,279,208	C→G	35.5%	H329Q (CAC→CAG)	yeeJ →	adhesin
RA	1,279,216	G→C	39.3%	G332A (GGT→GCT) ‡	yeeJ →	adhesin
RA	1,279,217	T→A	39.3%	G332G (GGT→GGA) ‡	yeeJ →	adhesin
RA	1,279,219	A→G	52.4%	K333R (AAA→AGA) ‡	yeeJ →	adhesin
RA	1,279,220	A→C	52.4%	K333N (AAA→AAC) ‡	yeeJ →	adhesin
RA	1,279,224	G→A	47.8%	V335I (GTC→ATC) ‡	yeeJ →	adhesin
RA	1,279,226	C→G	47.8%	V335V (GTC→GTG) ‡	yeeJ →	adhesin
RA	1,282,611	G→A	61.1%	A1464T (GCG→ACG)	yeeJ →	adhesin
RA	1,283,633	T→G	39.0%	V1804V (GTT→GTG)	yeeJ →	adhesin
RA	1,283,634	G→A	39.7%	A1805T (GCG→ACG)	yeeJ →	adhesin
RA	1,283,647	T→C	43.2%	V1809A (GTG→GCG)	yeeJ →	adhesin
RA	1,283,662	A→C	31.5%	E1814A (GAG→GCG)	yeeJ →	adhesin
RA	1,283,867	C→T	100%	A1882A (GCC→GCT)	yeeJ →	adhesin
RA	1,284,101	A→G	38.2%	K1960K (AAA→AAG)	yeeJ →	adhesin
RA	1,284,104	C→T	42.2%	V1961V (GTC→GTT)	yeeJ →	adhesin
RA	1,284,114	T→C	48.0%	S1965P (TCA→CCA)	yeeJ →	adhesin
RA	1,284,125	C→A	43.4%	A1968A (GCC→GCA)	yeeJ →	adhesin
RA	1,285,590	T→A	33.0%	pseudogene (324/327 nt) pseudogene (1050/1053 nt)	yeeL ← yeeL ←	ECK1975:JW5325:b1979; hypothetical protein, C‑ter fragment ECK1975:JW1961+JW5325:b4497; hypothetical protein
RA	1,285,832	G→A	16.0%	pseudogene (82/327 nt) pseudogene (808/1053 nt)	yeeL ← yeeL ←	ECK1975:JW5325:b1979; hypothetical protein, C‑ter fragment ECK1975:JW1961+JW5325:b4497; hypothetical protein
RA	1,286,261	A→T	22.0%	pseudogene (379/1053 nt) pseudogene (379/705 nt)	yeeL ← yeeL ←	ECK1975:JW1961+JW5325:b4497; hypothetical protein ECK1975:JW1961:b1980; hypothetical protein, N‑ter fragment
RA	1,287,709	C→T	36.8%	F252F (TTC→TTT)	shiA →	shikimate transporter
RA	1,287,724	G→A	39.7%	A257A (GCG→GCA)	shiA →	shikimate transporter
RA	1,287,739	A→G	41.0%	E262E (GAA→GAG)	shiA →	shikimate transporter
RA	1,287,757	C→T	14.5%	I268I (ATC→ATT)	shiA →	shikimate transporter
RA	1,289,145	T→C	33.8%	H258H (CAT→CAC)	amn →	AMP nucleosidase
RA	1,289,523	A→G	61.0%	E384E (GAA→GAG)	amn →	AMP nucleosidase
RA	1,290,390	C→T	37.2%	G74G (GGC→GGT)	yeeN →	conserved hypothetical protein
RA	1,290,890	C→A	55.1%	intergenic (+5/+448)	yeeN → / ← asnW	conserved hypothetical protein/tRNA‑Asn
RA	1,290,892	T→G	52.5%	intergenic (+7/+446)	yeeN → / ← asnW	conserved hypothetical protein/tRNA‑Asn
RA	1,291,652	A→G	40.8%	G502G (GGT→GGC)	yeeO ←	predicted multidrug efflux system
RA	1,292,843	A→G	33.9%	N105N (AAT→AAC)	yeeO ←	predicted multidrug efflux system
RA	1,293,306	C→T	68.1%	S307N (AGC→AAC)	cbl ←	DNA‑binding transcriptional activator
RA	1,293,320	C→G	66.7%	R302R (CGG→CGC)	cbl ←	DNA‑binding transcriptional activator
RA	1,293,836	C→T	43.3%	T130T (ACG→ACA)	cbl ←	DNA‑binding transcriptional activator
RA	1,293,839	C→A	44.8%	G129G (GGG→GGT)	cbl ←	DNA‑binding transcriptional activator
RA	1,293,854	G→C	34.6%	L124L (CTC→CTG)	cbl ←	DNA‑binding transcriptional activator
RA	1,294,414	C→T	35.5%	S277S (TCG→TCA)	nac ←	DNA‑binding transcriptional dual regulator
RA	1,294,417	T→C	36.4%	L276L (TTA→TTG)	nac ←	DNA‑binding transcriptional dual regulator
RA	1,294,423	C→T	49.6%	A274A (GCG→GCA)	nac ←	DNA‑binding transcriptional dual regulator
RA	1,294,444	T→G	47.7%	S267S (TCA→TCC)	nac ←	DNA‑binding transcriptional dual regulator
RA	1,294,462	G→T	49.1%	S261S (TCC→TCA)	nac ←	DNA‑binding transcriptional dual regulator
RA	1,294,615	T→C	23.7%	R210R (CGA→CGG)	nac ←	DNA‑binding transcriptional dual regulator
RA	1,294,653	T→C	31.3%	I198V (ATT→GTT)	nac ←	DNA‑binding transcriptional dual regulator
RA	1,294,657	A→G	33.5%	S196S (AGT→AGC)	nac ←	DNA‑binding transcriptional dual regulator
RA	1,297,593	C→T	50.0%	A62A (GCG→GCA)	cobT ←	nicotinate‑nucleotide dimethylbenzimidazole‑P phophoribosyl transferase
RA	1,298,836	A→C	25.2%	L80L (CTT→CTG)	cobU ←	bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase
RA	1,299,765	G→A	37.5%	L66L (CTG→TTG)	yeeX ←	conserved hypothetical protein
RA	1,302,292	A→G	43.5%	S263S (AGT→AGC)	dacD ←	D‑alanyl‑D‑alanine carboxypeptidase
RA	1,302,805	G→A	58.4%	R92R (CGC→CGT)	dacD ←	D‑alanyl‑D‑alanine carboxypeptidase
RA	1,306,522	T→A	44.6%	A358A (GCA→GCT)	yeeF ←	predicted amino‑acid transporter
RA	1,307,479	A→T	25.2%	T39T (ACT→ACA)	yeeF ←	predicted amino‑acid transporter
RA	1,308,306	T→C	37.7%	S162S (TCA→TCG)	yeeY ←	predicted DNA‑binding transcriptional regulator
RA	1,308,309	A→G	37.0%	F161F (TTT→TTC)	yeeY ←	predicted DNA‑binding transcriptional regulator
RA	1,309,899	G→A	34.4%	R31R (CGC→CGT)	yefM ←	antitoxin of the YoeB‑YefM toxin‑antitoxin system
RA	1,309,908	A→G	39.6%	L28L (CTT→CTC)	yefM ←	antitoxin of the YoeB‑YefM toxin‑antitoxin system
RA	1,310,934	T→C	52.3%	V155V (GTT→GTC)	hisG →	ATP phosphoribosyltransferase
RA	1,310,940	C→T	61.1%	V157V (GTC→GTT)	hisG →	ATP phosphoribosyltransferase
RA	1,310,943	C→G	61.8%	A158A (GCC→GCG)	hisG →	ATP phosphoribosyltransferase
RA	1,312,382	T→C	46.6%	R336R (CGT→CGC)	hisD →	bifunctional histidinal dehydrogenase and histidinol dehydrogenase
RA	1,312,395	A→G	48.9%	S341G (AGC→GGC)	hisD →	bifunctional histidinal dehydrogenase and histidinol dehydrogenase
RA	1,312,860	C→T	23.4%	A62V (GCG→GTG)	hisC →	histidinol‑phosphate aminotransferase
RA	1,314,240	T→A	28.7%	R165R (CGT→CGA)	hisB →	fused histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase
RA	1,314,252	T→C	42.5%	A169A (GCT→GCC)	hisB →	fused histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase
RA	1,314,264	T→C	50.6%	R173R (CGT→CGC)	hisB →	fused histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase
RA	1,314,267	T→C	50.7%	N174N (AAT→AAC)	hisB →	fused histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase
RA	1,314,660	C→T	24.6%	L305L (CTC→CTT)	hisB →	fused histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase
RA	1,315,519	C→T	72.3%	A39A (GCC→GCT)	hisA →	N‑(5'‑phospho‑L‑ribosyl‑formimino)‑5‑amino‑1‑ (5'‑phosphoribosyl)‑4‑imidazolecarboxamide isomerase
RA	1,315,525	G→A	72.3%	Q41Q (CAG→CAA)	hisA →	N‑(5'‑phospho‑L‑ribosyl‑formimino)‑5‑amino‑1‑ (5'‑phosphoribosyl)‑4‑imidazolecarboxamide isomerase
RA	1,315,909	G→A	22.4%	L169L (CTG→CTA)	hisA →	N‑(5'‑phospho‑L‑ribosyl‑formimino)‑5‑amino‑1‑ (5'‑phosphoribosyl)‑4‑imidazolecarboxamide isomerase
RA	1,316,223	G→A	24.0%	P34P (CCG→CCA)	hisF →	imidazole glycerol phosphate synthase, catalytic subunit with HisF
RA	1,316,241	T→C	23.1%	A40A (GCT→GCC)	hisF →	imidazole glycerol phosphate synthase, catalytic subunit with HisF
RA	1,318,439	T→A	18.4%	G47G (GGA→GGT)	cld ←	regulator of length of O‑antigen component of lipopolysaccharide chains
RA	1,319,007	C→T	44.3%	K295K (AAG→AAA)	ugd ←	UDP‑glucose 6‑dehydrogenase
RA	1,320,248	A→G	60.8%	A433A (GCT→GCC)	gnd ←	gluconate‑6‑phosphate dehydrogenase, decarboxylating
RA	1,320,260	G→A	51.6%	D429D (GAC→GAT)	gnd ←	gluconate‑6‑phosphate dehydrogenase, decarboxylating
RA	1,322,814	A→G	39.4%	I40I (ATT→ATC)	galF ←	predicted subunit with GalU
RA	1,322,844	T→C	32.6%	P30P (CCA→CCG)	galF ←	predicted subunit with GalU
RA	1,324,798	A→G	41.3%	G312G (GGT→GGC)	wcaL ←	predicted glycosyl transferase
RA	1,325,781	T→C	36.3%	T410T (ACA→ACG)	wcaK ←	predicted pyruvyl transferase
RA	1,325,790	C→T	35.7%	E407E (GAG→GAA)	wcaK ←	predicted pyruvyl transferase
RA	1,325,793	A→G	29.9%	R406R (CGT→CGC)	wcaK ←	predicted pyruvyl transferase
RA	1,325,802	G→A	30.7%	A403A (GCC→GCT)	wcaK ←	predicted pyruvyl transferase
RA	1,325,808	A→G	23.8%	S401S (AGT→AGC) ‡	wcaK ←	predicted pyruvyl transferase
RA	1,325,809	C→T	23.8%	S401N (AGT→AAT) ‡	wcaK ←	predicted pyruvyl transferase
RA	1,325,817	C→T	23.8%	A398A (GCG→GCA)	wcaK ←	predicted pyruvyl transferase
RA	1,325,820	A→G	25.3%	N397N (AAT→AAC)	wcaK ←	predicted pyruvyl transferase
RA	1,326,078	T→C	39.3%	V311V (GTA→GTG)	wcaK ←	predicted pyruvyl transferase
RA	1,327,112	C→T	40.6%	intergenic (‑102/+174)	wcaK ← / ← wzxC	predicted pyruvyl transferase/colanic acid exporter
RA	1,330,278	C→T	45.9%	S436S (TCG→TCA)	cpsG ←	phosphomannomutase
RA	1,330,292	G→A	47.3%	L432L (CTG→TTG)	cpsG ←	phosphomannomutase
RA	1,330,293	G→C	47.8%	R431R (CGC→CGG)	cpsG ←	phosphomannomutase
RA	1,330,311	A→G	61.9%	N425N (AAT→AAC)	cpsG ←	phosphomannomutase
RA	1,330,467	A→G	48.1%	F373F (TTT→TTC)	cpsG ←	phosphomannomutase
RA	1,330,470	C→T	48.1%	A372A (GCG→GCA)	cpsG ←	phosphomannomutase
RA	1,330,617	G→A	21.2%	A323A (GCC→GCT)	cpsG ←	phosphomannomutase
RA	1,330,797	G→A	35.1%	G263G (GGC→GGT)	cpsG ←	phosphomannomutase
RA	1,330,803	A→G	36.2%	I261I (ATT→ATC)	cpsG ←	phosphomannomutase
RA	1,331,307	A→G	68.2%	I93I (ATT→ATC)	cpsG ←	phosphomannomutase
RA	1,332,182	A→G	44.4%	A315A (GCT→GCC)	cpsB ←	mannose‑1‑phosphate guanyltransferase
RA	1,334,062	C→T	51.5%	P97P (CCG→CCA)	wcaI ←	predicted glycosyl transferase
RA	1,334,438	A→G	24.2%	S131P (TCG→CCG)	nudD ←	GDP‑mannose mannosyl hydrolase
RA	1,335,308	C→T	43.4%	P163P (CCG→CCA)	fcl ←	bifunctional GDP‑fucose synthetase: GDP‑4‑dehydro‑6‑deoxy‑D‑mannose epimerase and GDP‑4‑dehydro‑6‑L‑deoxygalactose reductase
RA	1,335,329	G→C	30.5%	R156R (CGC→CGG)	fcl ←	bifunctional GDP‑fucose synthetase: GDP‑4‑dehydro‑6‑deoxy‑D‑mannose epimerase and GDP‑4‑dehydro‑6‑L‑deoxygalactose reductase
RA	1,335,350	T→A	28.7%	S149S (TCA→TCT)	fcl ←	bifunctional GDP‑fucose synthetase: GDP‑4‑dehydro‑6‑deoxy‑D‑mannose epimerase and GDP‑4‑dehydro‑6‑L‑deoxygalactose reductase
RA	1,336,186	C→T	52.2%	Q245Q (CAG→CAA)	gmd ←	GDP‑D‑mannose dehydratase, NAD(P)‑binding
RA	1,336,234	G→A	36.1%	H229H (CAC→CAT)	gmd ←	GDP‑D‑mannose dehydratase, NAD(P)‑binding
RA	1,336,510	A→G	49.4%	Y137Y (TAT→TAC)	gmd ←	GDP‑D‑mannose dehydratase, NAD(P)‑binding
RA	1,336,522	G→A	54.3%	T133T (ACC→ACT)	gmd ←	GDP‑D‑mannose dehydratase, NAD(P)‑binding
RA	1,336,525	G→A	49.3%	S132S (TCC→TCT)	gmd ←	GDP‑D‑mannose dehydratase, NAD(P)‑binding
RA	1,336,543	A→G	32.7%	T126T (ACT→ACC)	gmd ←	GDP‑D‑mannose dehydratase, NAD(P)‑binding
RA	1,337,546	A→C	65.0%	T237T (ACT→ACG)	wcaE ←	predicted glycosyl transferase
RA	1,337,550	C→T	65.1%	R236H (CGT→CAT)	wcaE ←	predicted glycosyl transferase
RA	1,337,984	C→T	22.8%	S91S (TCG→TCA)	wcaE ←	predicted glycosyl transferase
RA	1,337,998	A→G	21.1%	L87L (TTG→CTG)	wcaE ←	predicted glycosyl transferase
RA	1,339,846	A→G	36.6%	F277F (TTT→TTC)	wcaC ←	predicted glycosyl transferase
RA	1,339,849	G→A	36.5%	T276T (ACC→ACT)	wcaC ←	predicted glycosyl transferase
RA	1,339,861	A→G	30.5%	I272I (ATT→ATC)	wcaC ←	predicted glycosyl transferase
RA	1,339,872	C→T	25.1%	G269S (GGC→AGC)	wcaC ←	predicted glycosyl transferase
RA	1,339,891	T→C	23.3%	V262V (GTA→GTG)	wcaC ←	predicted glycosyl transferase
RA	1,341,374	A→G	22.0%	G210G (GGT→GGC)	wcaA ←	predicted glycosyl transferase
RA	1,341,410	T→C	22.6%	V198V (GTA→GTG)	wcaA ←	predicted glycosyl transferase
RA	1,341,659	T→A	100%	T115T (ACA→ACT)	wcaA ←	predicted glycosyl transferase
RA	1,341,698	A→G	36.9%	R102R (CGT→CGC)	wcaA ←	predicted glycosyl transferase
RA	1,343,146	C→T	42.5%	E371E (GAG→GAA)	wzc ←	protein‑tyrosine kinase
RA	1,343,784	T→C	72.0%	N159D (AAC→GAC)	wzc ←	protein‑tyrosine kinase
RA	1,343,785	G→A	72.0%	D158D (GAC→GAT)	wzc ←	protein‑tyrosine kinase
RA	1,343,788	C→A	71.1%	L157L (CTG→CTT)	wzc ←	protein‑tyrosine kinase
RA	1,344,055	G→A	67.8%	S68S (AGC→AGT)	wzc ←	protein‑tyrosine kinase
RA	1,344,420	C→A	43.5%	P95P (CCG→CCT)	wzb ←	protein‑tyrosine phosphatase
RA	1,345,321	C→T	36.8%	G177S (GGT→AGT)	wza ←	lipoprotein required for capsular polysaccharide translocation through the outer membrane
RA	1,346,921	T→C	53.3%	I138I (ATT→ATC)	yegH →	fused predicted membrane proteins
RA	1,346,936	A→G	46.0%	S143S (TCA→TCG)	yegH →	fused predicted membrane proteins
RA	1,347,113	A→G	26.8%	A202A (GCA→GCG)	yegH →	fused predicted membrane proteins
RA	1,347,872	G→A	32.7%	E455E (GAG→GAA)	yegH →	fused predicted membrane proteins
RA	1,350,590	C→T	24.9%	G78S (GGC→AGC)	dcd ←	2'‑deoxycytidine 5'‑triphosphate deaminase
RA	1,350,591	C→T	24.9%	E77E (GAG→GAA)	dcd ←	2'‑deoxycytidine 5'‑triphosphate deaminase
RA	1,350,594	G→A	25.2%	D76D (GAC→GAT)	dcd ←	2'‑deoxycytidine 5'‑triphosphate deaminase
RA	1,351,725	G→A	56.5%	intergenic (‑171/+202)	udk ← / ← thiD	uridine/cytidine kinase/bifunctional hydroxy‑methylpyrimidine kinase and hydroxy‑phosphomethylpyrimidine kinase
RA	1,351,726	T→C	54.7%	intergenic (‑172/+201)	udk ← / ← thiD	uridine/cytidine kinase/bifunctional hydroxy‑methylpyrimidine kinase and hydroxy‑phosphomethylpyrimidine kinase
RA	1,351,743	A→T	38.7%	intergenic (‑189/+184)	udk ← / ← thiD	uridine/cytidine kinase/bifunctional hydroxy‑methylpyrimidine kinase and hydroxy‑phosphomethylpyrimidine kinase
RA	1,352,188	C→A	50.4%	L180L (CTG→CTT)	thiD ←	bifunctional hydroxy‑methylpyrimidine kinase and hydroxy‑phosphomethylpyrimidine kinase
RA	1,353,402	G→A	43.9%	T37T (ACC→ACT)	thiM ←	hydoxyethylthiazole kinase
RA	1,353,408	G→A	36.0%	T35T (ACC→ACT)	thiM ←	hydoxyethylthiazole kinase
RA	1,353,423	A→G	43.2%	N30N (AAT→AAC)	thiM ←	hydoxyethylthiazole kinase
RA	1,353,786	A→T	20.4%	R74R (CGT→CGA)	yohL ←	conserved hypothetical protein
RA	1,354,874	C→T	34.2%	A249A (GCC→GCT)	yohM →	membrane protein conferring nickel and cobalt resistance
RA	1,356,770	A→G	58.1%	S784S (AGT→AGC)	yehB ←	predicted outer membrane protein
RA	1,356,788	G→A	41.1%	G778G (GGC→GGT)	yehB ←	predicted outer membrane protein
RA	1,357,250	C→T	54.0%	L624L (TTG→TTA)	yehB ←	predicted outer membrane protein
RA	1,357,304	A→C	29.9%	G606G (GGT→GGG)	yehB ←	predicted outer membrane protein
RA	1,357,310	A→G	28.1%	N604N (AAT→AAC)	yehB ←	predicted outer membrane protein
RA	1,357,313	G→A	27.6%	F603F (TTC→TTT)	yehB ←	predicted outer membrane protein
RA	1,357,325	A→G	43.5%	S599S (AGT→AGC)	yehB ←	predicted outer membrane protein
RA	1,357,328	C→T	43.1%	G598G (GGG→GGA)	yehB ←	predicted outer membrane protein
RA	1,357,331	T→A	40.4%	V597V (GTA→GTT)	yehB ←	predicted outer membrane protein
RA	1,357,334	T→G	30.2%	T596T (ACA→ACC)	yehB ←	predicted outer membrane protein
RA	1,357,628	A→G	64.8%	G498G (GGT→GGC)	yehB ←	predicted outer membrane protein
RA	1,357,646	G→A	55.7%	S492S (AGC→AGT)	yehB ←	predicted outer membrane protein
RA	1,357,658	G→A	35.3%	S488S (TCC→TCT)	yehB ←	predicted outer membrane protein
RA	1,357,714	C→T	34.0%	V470I (GTC→ATC)	yehB ←	predicted outer membrane protein
RA	1,357,757	A→T	45.7%	V455V (GTT→GTA)	yehB ←	predicted outer membrane protein
RA	1,357,820	C→T	30.2%	T434T (ACG→ACA)	yehB ←	predicted outer membrane protein
RA	1,359,713	A→G	34.2%	N48N (AAT→AAC) ‡	yehC ←	predicted periplasmic pilin chaperone
RA	1,359,715	T→G	39.8%	N48H (AAT→CAT) ‡	yehC ←	predicted periplasmic pilin chaperone
RA	1,359,716	T→C	39.7%	E47E (GAA→GAG)	yehC ←	predicted periplasmic pilin chaperone
RA	1,359,734	G→A	45.1%	R41R (CGC→CGT)	yehC ←	predicted periplasmic pilin chaperone
RA	1,359,914	C→T	43.7%	V174I (GTT→ATT)	yehD ←	predicted fimbrial‑like adhesin protein
RA	1,359,918	A→G	43.7%	S172S (TCT→TCC)	yehD ←	predicted fimbrial‑like adhesin protein
RA	1,360,119	A→T	58.1%	G105G (GGT→GGA)	yehD ←	predicted fimbrial‑like adhesin protein
RA	1,361,205	T→A	50.5%	intergenic (‑198/+65)	yehE ← / ← mrp	hypothetical protein/antiporter inner membrane protein
RA	1,363,050	C→T	46.1%	G180G (GGC→GGT)	metG →	methionyl‑tRNA synthetase
RA	1,363,056	G→C	47.7%	T182T (ACG→ACC)	metG →	methionyl‑tRNA synthetase
RA	1,363,569	A→C	25.3%	A353A (GCA→GCC)	metG →	methionyl‑tRNA synthetase
RA	1,364,193	G→A	14.4%	P561P (CCG→CCA)	metG →	methionyl‑tRNA synthetase
RA	1,364,199	A→T	15.3%	A563A (GCA→GCT)	metG →	methionyl‑tRNA synthetase
RA	1,364,202	T→C	18.6%	D564D (GAT→GAC)	metG →	methionyl‑tRNA synthetase
RA	1,364,205	T→C	18.6%	D565D (GAT→GAC)	metG →	methionyl‑tRNA synthetase
RA	1,365,129	C→T	47.5%	R100R (CGC→CGT)	yohD →	conserved inner membrane protein
RA	1,365,663	C→T	57.3%	A213T (GCA→ACA)	yohF ←	predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain
RA	1,365,673	C→T	56.8%	R209R (CGG→CGA)	yohF ←	predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain
RA	1,367,294	G→A	28.6%	A49A (GCC→GCT)	yohG ←	predicted outer membrane protein
RA	1,367,302	C→T	32.2%	V47I (GTT→ATT)	yohG ←	predicted outer membrane protein
RA	1,367,570	A→G	42.3%	intergenic (‑130/+8)	yohG ← / ← yohH	predicted outer membrane protein/conserved hypothetical protein
RA	1,367,573	G→A	42.3%	intergenic (‑133/+5)	yohG ← / ← yohH	predicted outer membrane protein/conserved hypothetical protein
RA	1,368,902	C→T	59.2%	T171T (ACG→ACA)	dusC ←	tRNA‑dihydrouridine synthase C
RA	1,368,914	C→T	56.5%	V167V (GTG→GTA)	dusC ←	tRNA‑dihydrouridine synthase C
RA	1,368,917	C→T	55.7%	V166V (GTG→GTA)	dusC ←	tRNA‑dihydrouridine synthase C
RA	1,369,001	C→T	52.5%	V138V (GTG→GTA)	dusC ←	tRNA‑dihydrouridine synthase C
RA	1,369,010	G→A	45.6%	P135P (CCC→CCT)	dusC ←	tRNA‑dihydrouridine synthase C
RA	1,369,034	A→G	67.9%	R127R (CGT→CGC)	dusC ←	tRNA‑dihydrouridine synthase C
RA	1,369,934	C→T	30.1%	G94G (GGC→GGT)	yohJ →	conserved inner membrane protein
RA	1,369,997	G→A	53.1%	S115S (TCG→TCA)	yohJ →	conserved inner membrane protein
RA	1,370,006	A→G	54.9%	V118V (GTA→GTG)	yohJ →	conserved inner membrane protein
RA	1,370,805	C→T	33.0%	intergenic (+62/‑68)	yohK → / → cdd	predicted inner membrane protein/cytidine/deoxycytidine deaminase
RA	1,370,824	C→T	36.9%	intergenic (+81/‑49)	yohK → / → cdd	predicted inner membrane protein/cytidine/deoxycytidine deaminase
RA	1,371,319	G→T	30.1%	L149L (CTG→CTT)	cdd →	cytidine/deoxycytidine deaminase
RA	1,371,325	C→A	25.7%	G151G (GGC→GGA)	cdd →	cytidine/deoxycytidine deaminase
RA	1,371,355	G→A	40.2%	L161L (CTG→CTA)	cdd →	cytidine/deoxycytidine deaminase
RA	1,371,358	A→G	40.9%	P162P (CCA→CCG)	cdd →	cytidine/deoxycytidine deaminase
RA	1,371,806	C→T	100%	intergenic (+49/‑101)	cdd → / → sanA	cytidine/deoxycytidine deaminase/hypothetical protein
RA	1,374,788	G→T	19.9%	R165R (CGG→CGT)	yeiA →	predicted oxidoreductase
RA	1,375,750	C→A	33.6%	intergenic (+221/+22)	yeiA → / ← mglC	predicted oxidoreductase/methyl‑galactoside transporter subunit
RA	1,377,077	C→T	32.2%	K414K (AAG→AAA)	mglA ←	fused methyl‑galactoside transporter subunitsl and ATP‑binding components of ABC superfamily
RA	1,377,359	T→A	24.0%	I320I (ATA→ATT)	mglA ←	fused methyl‑galactoside transporter subunitsl and ATP‑binding components of ABC superfamily
RA	1,379,801	G→A	43.8%	A299A (GCC→GCT)	galS ←	DNA‑binding transcriptional repressor
RA	1,379,810	C→A	44.3%	A296A (GCG→GCT)	galS ←	DNA‑binding transcriptional repressor
RA	1,379,837	G→A	63.8%	T287T (ACC→ACT)	galS ←	DNA‑binding transcriptional repressor
RA	1,381,097	C→T	24.2%	A300A (GCG→GCA)	yeiB ←	conserved inner membrane protein
RA	1,381,100	A→C	34.5%	L299L (CTT→CTG)	yeiB ←	conserved inner membrane protein
RA	1,381,217	G→A	36.3%	R260R (CGC→CGT)	yeiB ←	conserved inner membrane protein
RA	1,381,235	C→T	35.3%	Q254Q (CAG→CAA) ‡	yeiB ←	conserved inner membrane protein
RA	1,381,236	T→C	35.4%	Q254R (CAG→CGG) ‡	yeiB ←	conserved inner membrane protein
RA	1,381,675	A→G	55.6%	L108L (TTG→CTG)	yeiB ←	conserved inner membrane protein
RA	1,381,717	A→G	60.7%	L94L (TTG→CTG)	yeiB ←	conserved inner membrane protein
RA	1,383,043	T→A	100%	P35P (CCT→CCA)	yeiG →	predicted esterase
RA	1,386,629	C→T	50.9%	A311A (GCG→GCA)	lysP ←	lysine transporter
RA	1,390,648	C→T	36.6%	L260L (CTC→CTT)	nfo →	endonuclease IV with intrinsic 3'‑5' exonuclease activity
RA	1,393,956	A→G	14.2%	G324G (GGT→GGC)	fruB ←	fused fructose‑specific PTS enzyme IIA component and HPr component
RA	1,398,612	C→G	42.4%	A312A (GCC→GCG)	yeiQ →	predicted dehydrogenase, NAD‑dependent
RA	1,398,615	T→C	44.2%	H313H (CAT→CAC)	yeiQ →	predicted dehydrogenase, NAD‑dependent
RA	1,400,543	T→A	54.6%	P86P (CCT→CCA)	yeiU →	undecaprenyl pyrophosphate phosphatase
RA	1,402,418	A→G	40.6%	A87A (GCA→GCG)	rtn →	conserved hypothetical protein
RA	1,402,436	C→T	46.9%	V93V (GTC→GTT)	rtn →	conserved hypothetical protein
RA	1,402,439	A→T	45.2%	R94R (CGA→CGT)	rtn →	conserved hypothetical protein
RA	1,402,454	G→A	40.3%	V99V (GTG→GTA)	rtn →	conserved hypothetical protein
RA	1,402,727	C→T	42.6%	G190G (GGC→GGT)	rtn →	conserved hypothetical protein
RA	1,403,231	G→A	42.8%	P358P (CCG→CCA)	rtn →	conserved hypothetical protein
RA	1,403,233	A→C	42.9%	D359A (GAC→GCC)	rtn →	conserved hypothetical protein
RA	1,403,261	A→G	39.5%	A368A (GCA→GCG)	rtn →	conserved hypothetical protein
RA	1,404,287	A→G	37.2%	A164A (GCA→GCG)	yejA →	predicted oligopeptide transporter subunit
RA	1,406,881	A→G	100%	L59L (TTA→TTG)	yejE →	predicted oligopeptide transporter subunit
RA	1,408,514	G→A	52.3%	P261P (CCG→CCA)	yejF →	fused predicted oligopeptide transporter subunits and ATP‑binding components of ABC superfamily
RA	1,408,517	A→T	51.7%	S262S (TCA→TCT)	yejF →	fused predicted oligopeptide transporter subunits and ATP‑binding components of ABC superfamily
RA	1,408,523	T→C	51.8%	D264D (GAT→GAC)	yejF →	fused predicted oligopeptide transporter subunits and ATP‑binding components of ABC superfamily
RA	1,408,526	A→G	46.9%	P265P (CCA→CCG)	yejF →	fused predicted oligopeptide transporter subunits and ATP‑binding components of ABC superfamily
RA	1,408,532	G→A	46.8%	P267P (CCG→CCA)	yejF →	fused predicted oligopeptide transporter subunits and ATP‑binding components of ABC superfamily
RA	1,408,544	T→C	43.5%	P271P (CCT→CCC)	yejF →	fused predicted oligopeptide transporter subunits and ATP‑binding components of ABC superfamily
RA	1,408,559	G→A	42.2%	L276L (CTG→CTA)	yejF →	fused predicted oligopeptide transporter subunits and ATP‑binding components of ABC superfamily
RA	1,408,853	G→A	56.8%	S374S (TCG→TCA)	yejF →	fused predicted oligopeptide transporter subunits and ATP‑binding components of ABC superfamily
RA	1,410,527	A→G	18.8%	S222S (AGT→AGC)	bcr ←	bicyclomycin/multidrug efflux system
RA	1,410,533	A→C	19.4%	L220L (CTT→CTG)	bcr ←	bicyclomycin/multidrug efflux system
RA	1,417,268	T→G	22.8%	A487A (GCT→GCG)	yejM →	predicted hydrolase, inner membrane
RA	1,417,873	T→C	46.4%	intergenic (+154/‑179)	proL → / → narP	tRNA‑Pro/DNA‑binding response regulator in two‑component regulatory system with NarQ or NarX
RA	1,419,063	C→T	29.4%	A300A (GCG→GCA)	ccmH ←	heme lyase, CcmH subunit
RA	1,419,077	G→A	33.7%	L296L (CTA→TTA)	ccmH ←	heme lyase, CcmH subunit
RA	1,419,735	T→C	21.9%	K76K (AAA→AAG)	ccmH ←	heme lyase, CcmH subunit
RA	1,419,744	A→G	21.9%	G73G (GGT→GGC)	ccmH ←	heme lyase, CcmH subunit
RA	1,420,124	A→G	72.4%	D131D (GAT→GAC)	ccmG ←	periplasmic thioredoxin of cytochrome c‑type biogenesis
RA	1,422,085	A→G	62.4%	R124R (CGT→CGC)	ccmF ←	heme lyase, CcmF subunit
RA	1,422,091	C→A	59.4%	V122V (GTG→GTT)	ccmF ←	heme lyase, CcmF subunit
RA	1,422,361	A→G	21.3%	D32D (GAT→GAC)	ccmF ←	heme lyase, CcmF subunit
RA	1,422,364	T→C	21.3%	G31G (GGA→GGG)	ccmF ←	heme lyase, CcmF subunit
RA	1,422,660	C→T	100%	V91V (GTG→GTA)	ccmE ←	periplasmic heme chaperone
RA	1,423,342	C→A	56.4%	V177V (GTG→GTT)	ccmC ←	heme exporter subunit
RA	1,426,028	A→G	44.9%	N81N (AAT→AAC)	napB ←	nitrate reductase, small, cytochrome C550 subunit, periplasmic
RA	1,426,109	A→T	21.0%	D54E (GAT→GAA)	napB ←	nitrate reductase, small, cytochrome C550 subunit, periplasmic
RA	1,427,002	T→C	40.8%	P43P (CCA→CCG)	napH ←	ferredoxin‑type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)
RA	1,427,948	T→C	31.5%	P786P (CCA→CCG)	napA ←	nitrate reductase, periplasmic, large subunit
RA	1,431,974	T→C	100%	intergenic (+29/+686)	eco → / ← mqo	ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain
RA	1,431,976	2 bp→GA	100%	intergenic (+31/+683)	eco → / ← mqo	ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain
RA	1,431,979	C→T	100%	intergenic (+34/+681)	eco → / ← mqo	ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain
RA	1,433,227	T→C	38.1%	L360L (CTA→CTG)	mqo ←	malate dehydrogenase, FAD/NAD(P)‑binding domain
RA	1,436,912	G→A	40.5%	A349V (GCT→GTT)	ada ←	fused DNA‑binding transcriptional dual regulator and O6‑methylguanine‑DNA methyltransferase
RA	1,438,595	G→A	42.8%	I164I (ATC→ATT)	yojL ←	predicted thiamine biosynthesis lipoprotein
RA	1,439,432	G→A	43.3%	F290F (TTC→TTT)	ompC ←	outer membrane porin protein C
RA	1,439,903	A→G	44.1%	G133G (GGT→GGC)	ompC ←	outer membrane porin protein C
RA	1,440,158	T→C	41.8%	K48K (AAA→AAG)	ompC ←	outer membrane porin protein C
RA	1,441,372	G→C	33.1%	A111A (GCG→GCC)	rcsD →	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
RA	1,444,406	T→C	34.5%	intergenic (+27/+173)	rcsB → / ← rcsC	DNA‑binding response regulator in two‑component regulatory system with RcsC and YojN/hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,444,430	C→G	21.4%	intergenic (+51/+149)	rcsB → / ← rcsC	DNA‑binding response regulator in two‑component regulatory system with RcsC and YojN/hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,445,416	A→G	70.7%	D655D (GAT→GAC)	rcsC ←	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,445,467	G→A	52.6%	T638T (ACC→ACT)	rcsC ←	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,446,895	G→A	45.4%	I162I (ATC→ATT)	rcsC ←	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,446,916	C→T	20.2%	L155L (TTG→TTA) ‡	rcsC ←	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,446,918	A→G	20.9%	L155L (TTG→CTG) ‡	rcsC ←	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,447,102	G→A	50.0%	S93S (TCC→TCT)	rcsC ←	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,447,108	G→A	50.7%	A91A (GCC→GCT)	rcsC ←	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
RA	1,447,784	G→A	38.2%	D64N (GAT→AAT)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,448,005	G→C	41.8%	V137V (GTG→GTC)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,448,026	A→G	50.0%	L144L (TTA→TTG)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,448,248	T→A	14.3%	I218I (ATT→ATA)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,448,281	A→T	17.8%	A229A (GCA→GCT)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,448,347	T→C	57.7%	N251N (AAT→AAC)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,449,142	C→T	54.9%	S516S (AGC→AGT)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,449,160	C→T	49.5%	R522R (CGC→CGT)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,449,165	A→G	44.2%	Q524R (CAA→CGA)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,449,175	A→G	50.0%	Q527Q (CAA→CAG)	atoS →	sensory histidine kinase in two‑component regulatory system with AtoC
RA	1,450,176	A→G	66.2%	L253L (CTA→CTG)	atoC →	fused response regulator of ato opeon, in two‑component system with AtoS
RA	1,450,200	A→G	43.3%	L261L (CTA→CTG)	atoC →	fused response regulator of ato opeon, in two‑component system with AtoS
RA	1,453,736	G→A	48.1%	A26T (GCC→ACC)	atoB →	acetyl‑CoA acetyltransferase
RA	1,456,231	C→T	100%	T373T (ACG→ACA)	yfaQ ←	hypothetical protein
RA	1,456,246	G→A	100%	P368P (CCC→CCT)	yfaQ ←	hypothetical protein
RA	1,458,271	C→T	37.5%	pseudogene (3684/4605 nt) pseudogene (3684/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,458,274	C→A	37.6%	pseudogene (3681/4605 nt) pseudogene (3681/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,458,559	A→G	27.8%	pseudogene (3396/4605 nt) pseudogene (3396/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,458,571	A→G	37.8%	pseudogene (3384/4605 nt) pseudogene (3384/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,458,605	G→A	52.2%	pseudogene (3350/4605 nt) pseudogene (3350/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,459,992	C→A	50.0%	pseudogene (1963/4605 nt) pseudogene (1963/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,460,020	A→G	50.0%	pseudogene (1935/4605 nt) pseudogene (1935/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,460,029	A→G	55.4%	pseudogene (1926/4605 nt) pseudogene (1926/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,461,154	T→G	100%	pseudogene (801/4605 nt) pseudogene (801/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,461,157	G→A	62.5%	pseudogene (798/4605 nt) pseudogene (798/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,461,181	G→T	49.2%	pseudogene (774/4605 nt) pseudogene (774/4104 nt)	yfaS ← yfaS ←	ECK2220:JW2222+JW2221:b4500; hypothetical protein ECK2220:JW2222:b2228; hypothetical protein, N‑ter fragment
RA	1,462,113	C→T	20.4%	A133A (GCG→GCA)	yfaT ←	hypothetical protein
RA	1,463,378	C→T	64.3%	R273R (CGG→CGA)	yfaA ←	hypothetical protein
RA	1,463,756	C→A	40.6%	L147L (CTG→CTT)	yfaA ←	hypothetical protein
RA	1,463,780	G→A	32.4%	G139G (GGC→GGT)	yfaA ←	hypothetical protein
RA	1,464,254	T→C	22.8%	intergenic (‑58/+91)	yfaA ← / ← gyrA	hypothetical protein/DNA gyrase (type II topoisomerase), subunit A
RA	1,464,999	A→G	47.5%	T658T (ACT→ACC)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,065	T→C	100%	P636P (CCA→CCG)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,077	A→G	100%	T632T (ACT→ACC)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,344	G→A	58.4%	L543L (CTC→CTT)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,350	C→G	68.7%	V541V (GTG→GTC)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,353	G→C	65.0%	V540V (GTC→GTG)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,518	G→A	34.8%	I485I (ATC→ATT)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,692	A→C	22.0%	A427A (GCT→GCG)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,701	G→C	26.8%	L424L (CTC→CTG)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,465,710	G→A	28.8%	A421A (GCC→GCT)	gyrA ←	DNA gyrase (type II topoisomerase), subunit A
RA	1,469,153	A→G	31.2%	S857P (TCC→CCC)	yfaL ←	adhesin
RA	1,469,159	C→T	34.9%	V855I (GTT→ATT)	yfaL ←	adhesin
RA	1,469,318	C→T	38.0%	V802I (GTT→ATT)	yfaL ←	adhesin
RA	1,469,411	T→C	55.0%	T771A (ACA→GCA)	yfaL ←	adhesin
RA	1,469,414	A→G	55.1%	L770L (TTG→CTG)	yfaL ←	adhesin
RA	1,469,421	A→G	61.2%	G767G (GGT→GGC)	yfaL ←	adhesin
RA	1,472,815	C→G	24.6%	T133T (ACC→ACG)	nrdA →	ribonucleoside diphosphate reductase 1, alpha subunit
RA	1,472,914	T→C	45.6%	Y166Y (TAT→TAC)	nrdA →	ribonucleoside diphosphate reductase 1, alpha subunit
RA	1,472,917	G→A	45.6%	E167E (GAG→GAA)	nrdA →	ribonucleoside diphosphate reductase 1, alpha subunit
RA	1,473,718	T→C	69.7%	R434R (CGT→CGC)	nrdA →	ribonucleoside diphosphate reductase 1, alpha subunit
RA	1,474,270	T→C	28.2%	A618A (GCT→GCC)	nrdA →	ribonucleoside diphosphate reductase 1, alpha subunit
RA	1,474,576	C→T	34.3%	T720T (ACC→ACT)	nrdA →	ribonucleoside diphosphate reductase 1, alpha subunit
RA	1,475,298	T→C	31.4%	R121R (CGT→CGC)	nrdB →	ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like
RA	1,475,307	T→C	31.3%	T124T (ACT→ACC)	nrdB →	ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like
RA	1,475,316	T→C	21.5%	I127I (ATT→ATC)	nrdB →	ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like
RA	1,475,709	C→T	36.3%	D258D (GAC→GAT)	nrdB →	ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like
RA	1,475,715	T→G	37.8%	P260P (CCT→CCG)	nrdB →	ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like
RA	1,475,814	C→T	19.8%	R293R (CGC→CGT)	nrdB →	ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like
RA	1,475,817	C→T	19.5%	D294D (GAC→GAT)	nrdB →	ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like
RA	1,475,847	T→C	42.7%	I304I (ATT→ATC)	nrdB →	ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like
RA	1,476,848	A→G	29.8%	Y59Y (TAT→TAC)	inaA ←	conserved hypothetical protein
RA	1,476,857	G→A	29.1%	S56S (TCC→TCT)	inaA ←	conserved hypothetical protein
RA	1,477,742	T→A	42.5%	A274A (GCA→GCT)	glpQ ←	periplasmic glycerophosphodiester phosphodiesterase
RA	1,478,087	A→G	46.2%	N159N (AAT→AAC)	glpQ ←	periplasmic glycerophosphodiester phosphodiesterase
RA	1,478,321	G→A	47.4%	Y81Y (TAC→TAT)	glpQ ←	periplasmic glycerophosphodiester phosphodiesterase
RA	1,478,347	T→G	34.5%	N73H (AAT→CAT)	glpQ ←	periplasmic glycerophosphodiester phosphodiesterase
RA	1,478,949	A→G	42.8%	V326V (GTT→GTC)	glpT ←	sn‑glycerol‑3‑phosphate transporter
RA	1,478,970	G→A	42.2%	G319G (GGC→GGT)	glpT ←	sn‑glycerol‑3‑phosphate transporter
RA	1,478,976	G→A	41.1%	F317F (TTC→TTT)	glpT ←	sn‑glycerol‑3‑phosphate transporter
RA	1,479,278	A→G	18.0%	L217L (TTG→CTG)	glpT ←	sn‑glycerol‑3‑phosphate transporter
RA	1,479,321	T→C	17.8%	L202L (TTA→TTG) ‡	glpT ←	sn‑glycerol‑3‑phosphate transporter
RA	1,479,323	A→G	17.7%	L202L (TTA→CTA) ‡	glpT ←	sn‑glycerol‑3‑phosphate transporter
RA	1,480,246	C→T	40.5%	G16G (GGC→GGT)	glpA →	sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)‑binding
RA	1,480,522	T→C	56.7%	I108I (ATT→ATC)	glpA →	sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)‑binding
RA	1,480,660	C→A	32.6%	T154T (ACC→ACA)	glpA →	sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)‑binding
RA	1,481,284	T→G	34.2%	A362A (GCT→GCG)	glpA →	sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)‑binding
RA	1,481,302	G→C	46.9%	A368A (GCG→GCC)	glpA →	sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)‑binding
RA	1,483,604	T→C	38.8%	L178L (TTA→CTA)	glpC →	sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), small subunit
RA	1,483,609	T→C	38.1%	G179G (GGT→GGC)	glpC →	sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), small subunit
RA	1,485,543	A→C	44.5%	A99A (GCT→GCG)	menF ←	isochorismate synthase 2
RA	1,485,551	G→A	41.4%	L97L (CTG→TTG)	menF ←	isochorismate synthase 2
RA	1,485,558	A→G	46.6%	I94I (ATT→ATC)	menF ←	isochorismate synthase 2
RA	1,486,136	C→T	38.6%	A392A (GCG→GCA)	nuoN ←	NADH:ubiquinone oxidoreductase, membrane subunit N
RA	1,486,331	C→T	31.6%	P327P (CCG→CCA)	nuoN ←	NADH:ubiquinone oxidoreductase, membrane subunit N
RA	1,486,340	G→A	40.9%	A324A (GCC→GCT)	nuoN ←	NADH:ubiquinone oxidoreductase, membrane subunit N
RA	1,486,500	G→A	38.0%	A271V (GCC→GTC)	nuoN ←	NADH:ubiquinone oxidoreductase, membrane subunit N
RA	1,486,679	C→T	54.9%	V211V (GTG→GTA)	nuoN ←	NADH:ubiquinone oxidoreductase, membrane subunit N
RA	1,486,694	G→A	66.6%	S206S (AGC→AGT)	nuoN ←	NADH:ubiquinone oxidoreductase, membrane subunit N
RA	1,486,715	G→A	60.3%	L199L (CTC→CTT)	nuoN ←	NADH:ubiquinone oxidoreductase, membrane subunit N
RA	1,486,723	G→A	61.9%	L197L (CTG→TTG)	nuoN ←	NADH:ubiquinone oxidoreductase, membrane subunit N
RA	1,487,774	T→G	53.1%	V418V (GTA→GTC)	nuoM ←	NADH:ubiquinone oxidoreductase, membrane subunit M
RA	1,488,467	A→G	73.5%	I187I (ATT→ATC)	nuoM ←	NADH:ubiquinone oxidoreductase, membrane subunit M
RA	1,488,482	G→A	63.7%	G182G (GGC→GGT)	nuoM ←	NADH:ubiquinone oxidoreductase, membrane subunit M
RA	1,489,398	A→G	100%	Y545Y (TAT→TAC)	nuoL ←	NADH:ubiquinone oxidoreductase, membrane subunit L
RA	1,489,413	T→G	100%	G540G (GGA→GGC)	nuoL ←	NADH:ubiquinone oxidoreductase, membrane subunit L
RA	1,489,437	G→A	100%	G532G (GGC→GGT)	nuoL ←	NADH:ubiquinone oxidoreductase, membrane subunit L
RA	1,490,568	C→A	48.0%	G155G (GGG→GGT)	nuoL ←	NADH:ubiquinone oxidoreductase, membrane subunit L
RA	1,492,939	A→G	50.8%	L164L (TTG→CTG)	nuoH ←	NADH:ubiquinone oxidoreductase, membrane subunit H
RA	1,493,288	G→A	63.1%	Y47Y (TAC→TAT)	nuoH ←	NADH:ubiquinone oxidoreductase, membrane subunit H
RA	1,493,345	G→A	60.8%	C28C (TGC→TGT)	nuoH ←	NADH:ubiquinone oxidoreductase, membrane subunit H
RA	1,494,022	G→A	60.0%	S712S (AGC→AGT)	nuoG ←	NADH:ubiquinone oxidoreductase, chain G
RA	1,494,025	G→A	55.1%	Y711Y (TAC→TAT)	nuoG ←	NADH:ubiquinone oxidoreductase, chain G
RA	1,494,028	A→G	55.2%	R710R (CGT→CGC)	nuoG ←	NADH:ubiquinone oxidoreductase, chain G
RA	1,495,138	G→A	100%	Y340Y (TAC→TAT)	nuoG ←	NADH:ubiquinone oxidoreductase, chain G
RA	1,496,624	A→G	41.3%	D306D (GAT→GAC)	nuoF ←	NADH:ubiquinone oxidoreductase, chain F
RA	1,497,661	A→G	49.5%	F126F (TTT→TTC)	nuoE ←	NADH:ubiquinone oxidoreductase, chain E
RA	1,497,667	G→A	47.3%	G124G (GGC→GGT)	nuoE ←	NADH:ubiquinone oxidoreductase, chain E
RA	1,497,670	A→G	47.5%	D123D (GAT→GAC)	nuoE ←	NADH:ubiquinone oxidoreductase, chain E
RA	1,498,221	T→C	60.9%	K541K (AAA→AAG)	nuoC ←	NADH:ubiquinone oxidoreductase, chain C,D
RA	1,500,201	A→G	39.5%	G133G (GGT→GGC)	nuoB ←	NADH:ubiquinone oxidoreductase, chain B
RA	1,500,204	A→G	39.9%	S132S (TCT→TCC)	nuoB ←	NADH:ubiquinone oxidoreductase, chain B
RA	1,501,821	A→G	42.8%	D269D (GAT→GAC)	lrhA ←	DNA‑binding transcriptional repressor
RA	1,502,921	G→A	51.6%	intergenic (‑294/‑626)	lrhA ← / → yfbQ	DNA‑binding transcriptional repressor/predicted aminotransferase
RA	1,502,952	C→A	69.6%	intergenic (‑325/‑595)	lrhA ← / → yfbQ	DNA‑binding transcriptional repressor/predicted aminotransferase
RA	1,505,057	C→T	65.4%	A70A (GCC→GCT)	yfbR →	deoxyribonucleoside 5'‑monophosphatase
RA	1,505,809	C→A	12.7%	G510G (GGG→GGT)	yfbS ←	predicted transporter
RA	1,505,836	A→G	22.6%	G501G (GGT→GGC)	yfbS ←	predicted transporter
RA	1,506,571	G→A	54.5%	G256G (GGC→GGT)	yfbS ←	predicted transporter
RA	1,506,580	C→T	54.8%	E253E (GAG→GAA)	yfbS ←	predicted transporter
RA	1,506,598	A→G	68.5%	D247D (GAT→GAC)	yfbS ←	predicted transporter
RA	1,506,604	C→T	62.1%	R245R (CGG→CGA)	yfbS ←	predicted transporter
RA	1,507,973	C→A	100%	A35S (GCG→TCG)	yfbT ←	predicted hydrolase or phosphatase
RA	1,508,705	G→A	36.1%	R138R (CGC→CGT)	yfbV ←	conserved inner membrane protein
RA	1,510,448	T→C	48.4%	T331T (ACT→ACC)	ackA →	acetate kinase A and propionate kinase 2
RA	1,511,011	A→G	25.8%	A93A (GCA→GCG)	pta →	phosphate acetyltransferase
RA	1,511,053	T→G	45.9%	V107V (GTT→GTG)	pta →	phosphate acetyltransferase
RA	1,513,033	C→A	37.5%	intergenic (+156/+276)	pta → / ← ubiX	phosphate acetyltransferase/3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
RA	1,513,394	A→G	60.1%	V162A (GTG→GCG)	ubiX ←	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
RA	1,513,411	C→T	58.8%	P156P (CCG→CCA)	ubiX ←	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
RA	1,513,603	A→C	43.9%	L92L (CTT→CTG)	ubiX ←	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
RA	1,513,641	G→A	29.0%	L80L (CTG→TTG)	ubiX ←	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
RA	1,514,048	C→A	40.1%	T481T (ACG→ACT)	purF ←	amidophosphoribosyltransferase
RA	1,514,054	G→A	34.5%	L479L (CTC→CTT)	purF ←	amidophosphoribosyltransferase
RA	1,514,474	G→A	36.7%	G339G (GGC→GGT)	purF ←	amidophosphoribosyltransferase
RA	1,514,486	A→G	31.3%	F335F (TTT→TTC)	purF ←	amidophosphoribosyltransferase
RA	1,514,504	G→A	24.5%	R329R (CGC→CGT)	purF ←	amidophosphoribosyltransferase
RA	1,515,074	C→T	66.7%	E139E (GAG→GAA)	purF ←	amidophosphoribosyltransferase
RA	1,515,080	G→T	74.4%	A137A (GCC→GCA)	purF ←	amidophosphoribosyltransferase
RA	1,515,086	G→A	74.5%	I135I (ATC→ATT)	purF ←	amidophosphoribosyltransferase
RA	1,515,092	A→G	73.4%	L133L (CTT→CTC)	purF ←	amidophosphoribosyltransferase
RA	1,516,229	G→A	59.1%	intergenic (‑214/+45)	cvpA ← / ← dedD	membrane protein required for colicin V production/conserved hypothetical protein
RA	1,516,230	T→C	59.2%	intergenic (‑215/+44)	cvpA ← / ← dedD	membrane protein required for colicin V production/conserved hypothetical protein
RA	1,516,244	C→T	77.3%	intergenic (‑229/+30)	cvpA ← / ← dedD	membrane protein required for colicin V production/conserved hypothetical protein
RA	1,517,661	A→C	42.9%	G178G (GGT→GGG)	folC ←	bifunctional folylpolyglutamate synthase and dihydrofolate synthase
RA	1,521,023	A→G	58.6%	S293S (TCT→TCC)	usg ←	predicted semialdehyde dehydrogenase
RA	1,521,041	C→A	51.3%	S287S (TCG→TCT)	usg ←	predicted semialdehyde dehydrogenase
RA	1,521,050	A→T	45.5%	G284G (GGT→GGA)	usg ←	predicted semialdehyde dehydrogenase
RA	1,522,711	C→T	100%	L131L (TTG→TTA)	pdxB ←	erythronate‑4‑phosphate dehydrogenase
RA	1,522,714	T→A	100%	R130R (CGA→CGT)	pdxB ←	erythronate‑4‑phosphate dehydrogenase
RA	1,522,720	T→A	100%	G128G (GGA→GGT)	pdxB ←	erythronate‑4‑phosphate dehydrogenase
RA	1,522,738	C→A	100%	V122V (GTG→GTT)	pdxB ←	erythronate‑4‑phosphate dehydrogenase
RA	1,524,808	C→A	52.0%	V189L (GTA→TTA)	yfcJ ←	predicted transporter
RA	1,524,816	A→G	50.7%	V186A (GTA→GCA)	yfcJ ←	predicted transporter
RA	1,525,136	A→G	47.7%	G79G (GGT→GGC)	yfcJ ←	predicted transporter
RA	1,525,931	C→T	84.8%	E309E (GAG→GAA)	fabB ←	3‑oxoacyl‑[acyl‑carrier‑protein] synthase I
RA	1,527,117	G→A	39.9%	G34G (GGG→GGA)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,527,855	G→A	100%	S280S (TCG→TCA)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,527,870	G→T	100%	R285R (CGG→CGT)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,528,294	T→C	52.8%	Y427H (TAT→CAT)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,528,303	T→C	47.0%	Y430H (TAT→CAT)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,528,315	A→G	38.1%	N434D (AAT→GAT)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,528,336	T→G	43.7%	C441G (TGT→GGT)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,528,792	T→C	43.6%	L593L (TTG→CTG)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,528,801	C→A	44.5%	Q596K (CAG→AAG)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,528,812	G→A	45.0%	E599E (GAG→GAA)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,528,832	T→A	51.9%	F606Y (TTT→TAT)	trmC →	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme
RA	1,529,221	A→C	36.5%	A67A (GCT→GCG)	yfcL ←	hypothetical protein
RA	1,529,224	A→G	37.9%	G66G (GGT→GGC)	yfcL ←	hypothetical protein
RA	1,529,257	C→T	50.0%	T55T (ACG→ACA)	yfcL ←	hypothetical protein
RA	1,530,159	C→T	100%	G218G (GGG→GGA)	yfcA ←	conserved inner membrane protein
RA	1,530,162	C→T	100%	V217V (GTG→GTA)	yfcA ←	conserved inner membrane protein
RA	1,530,167	G→A	100%	L216L (CTG→TTG)	yfcA ←	conserved inner membrane protein
RA	1,530,171	G→C	100%	V214V (GTC→GTG)	yfcA ←	conserved inner membrane protein
RA	1,530,177	G→T	100%	G212G (GGC→GGA)	yfcA ←	conserved inner membrane protein
RA	1,530,201	G→A	100%	G204G (GGC→GGT)	yfcA ←	conserved inner membrane protein
RA	1,530,282	A→G	100%	F177F (TTT→TTC)	yfcA ←	conserved inner membrane protein
RA	1,532,228	A→T	100%	D166E (GAT→GAA)	aroC ←	chorismate synthase
RA	1,532,234	C→T	100%	P164P (CCG→CCA)	aroC ←	chorismate synthase
RA	1,532,988	A→G	49.1%	T235T (ACT→ACC)	prmB ←	N5‑glutamine methyltransferase
RA	1,533,003	G→A	57.1%	G230G (GGC→GGT)	prmB ←	N5‑glutamine methyltransferase
RA	1,533,006	C→G	58.0%	L229L (CTG→CTC)	prmB ←	N5‑glutamine methyltransferase
RA	1,533,152	G→A	36.5%	L181L (CTG→TTG)	prmB ←	N5‑glutamine methyltransferase
RA	1,534,034	C→G	60.0%	S59S (TCC→TCG)	yfcN →	conserved hypothetical protein
RA	1,534,037	T→C	62.2%	D60D (GAT→GAC)	yfcN →	conserved hypothetical protein
RA	1,534,040	G→A	62.1%	E61E (GAG→GAA)	yfcN →	conserved hypothetical protein
RA	1,534,049	G→A	50.7%	P64P (CCG→CCA)	yfcN →	conserved hypothetical protein
RA	1,534,055	A→G	55.3%	L66L (TTA→TTG)	yfcN →	conserved hypothetical protein
RA	1,534,073	G→C	33.3%	V72V (GTG→GTC)	yfcN →	conserved hypothetical protein
RA	1,542,008	G→C	100%	S19S (TCC→TCG)	sixA ←	phosphohistidine phosphatase
RA	1,542,575	T→G	46.0%	I613L (ATC→CTC)	yfcX ←	fused enoyl‑CoA hydratase, 3‑hydroxybutyryl‑CoA epimerase, dodecenoyl‑CoA D‑isomerase, and 3‑hydroxyacyl‑CoA dehydrogenase, subunit of anaerobic fatty acid oxidation complex
RA	1,542,960	T→G	59.4%	P484P (CCA→CCC)	yfcX ←	fused enoyl‑CoA hydratase, 3‑hydroxybutyryl‑CoA epimerase, dodecenoyl‑CoA D‑isomerase, and 3‑hydroxyacyl‑CoA dehydrogenase, subunit of anaerobic fatty acid oxidation complex
RA	1,542,969	A→G	42.3%	G481G (GGT→GGC)	yfcX ←	fused enoyl‑CoA hydratase, 3‑hydroxybutyryl‑CoA epimerase, dodecenoyl‑CoA D‑isomerase, and 3‑hydroxyacyl‑CoA dehydrogenase, subunit of anaerobic fatty acid oxidation complex
RA	1,545,006	A→G	100%	V239A (GTC→GCC)	yfcY ←	beta‑ketoacyl‑CoA thiolase, anaerobic, subunit
RA	1,550,146	G→A	55.8%	T38T (ACC→ACT)	vacJ ←	predicted lipoprotein
RA	1,550,155	G→A	46.6%	F35F (TTC→TTT)	vacJ ←	predicted lipoprotein
RA	1,550,810	T→C	38.3%	G86G (GGT→GGC)	yfdC →	predicted inner membrane protein
RA	1,551,242	T→C	100%	H230H (CAT→CAC)	yfdC →	predicted inner membrane protein
RA	1,551,248	G→T	48.6%	V232V (GTG→GTT)	yfdC →	predicted inner membrane protein
RA	1,552,932	A→C	31.9%	T106T (ACT→ACG)	dsdC ←	DNA‑binding transcriptional dual regulator
RA	1,553,148	C→G	84.4%	L34L (CTG→CTC)	dsdC ←	DNA‑binding transcriptional dual regulator
RA	1,553,151	G→A	100%	A33A (GCC→GCT)	dsdC ←	DNA‑binding transcriptional dual regulator
RA	1,553,364	A→C	49.4%	intergenic (‑115/‑103)	dsdC ← / → dsdX	DNA‑binding transcriptional dual regulator/predicted transporter
RA	1,553,378	C→G	52.7%	intergenic (‑129/‑89)	dsdC ← / → dsdX	DNA‑binding transcriptional dual regulator/predicted transporter
RA	1,554,660	T→G	37.3%	T398T (ACT→ACG)	dsdX →	predicted transporter
RA	1,554,675	G→A	30.9%	S403S (TCG→TCA)	dsdX →	predicted transporter
RA	1,554,687	A→G	34.8%	L407L (CTA→CTG)	dsdX →	predicted transporter
RA	1,555,145	T→C	79.5%	D108D (GAT→GAC)	dsdA →	D‑serine ammonia‑lyase
RA	1,555,181	C→T	50.0%	R120R (CGC→CGT)	dsdA →	D‑serine ammonia‑lyase
RA	1,555,457	T→C	35.2%	Y212Y (TAT→TAC)	dsdA →	D‑serine ammonia‑lyase
RA	1,556,173	A→C	28.4%	intergenic (+23/+1240)	dsdA → / ← emrY	D‑serine ammonia‑lyase/predicted multidrug efflux system
RA	1,556,777	T→C	29.3%	intergenic (+627/+636)	dsdA → / ← emrY	D‑serine ammonia‑lyase/predicted multidrug efflux system
RA	1,558,506	T→C	40.7%	T152A (ACG→GCG)	emrK ←	EmrKY‑TolC multidrug resistance efflux pump, membrane fusion protein component
RA	1,558,525	C→T	37.2%	Q145Q (CAG→CAA)	emrK ←	EmrKY‑TolC multidrug resistance efflux pump, membrane fusion protein component
RA	1,558,537	C→A	34.1%	P141P (CCG→CCT)	emrK ←	EmrKY‑TolC multidrug resistance efflux pump, membrane fusion protein component
RA	1,560,390	A→G	25.9%	N133D (AAT→GAT)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,560,407	C→T	24.5%	T138T (ACC→ACT)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,560,410	A→T	24.7%	K139N (AAA→AAT)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,560,413	A→T	24.6%	P140P (CCA→CCT)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,560,414	T→C	23.4%	L141L (TTG→CTG)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,560,500	G→A	39.0%	R169R (CGG→CGA)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,561,043	C→T	33.2%	H350H (CAC→CAT)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,561,049	C→T	36.3%	I352I (ATC→ATT)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,562,111	A→C	68.8%	I706I (ATA→ATC)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,562,114	G→T	69.8%	K707N (AAG→AAT)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,562,117	T→A	56.4%	A708A (GCT→GCA)	evgS →	hybrid sensory histidine kinase in two‑component regulatory system with EvgA
RA	1,565,578	G→T	29.7%	G156G (GGC→GGA)	glk ←	glucokinase
RA	1,565,635	C→T	100%	T137T (ACG→ACA)	glk ←	glucokinase
RA	1,565,671	G→T	45.2%	V125V (GTC→GTA)	glk ←	glucokinase
RA	1,566,500	C→T	65.8%	D84D (GAC→GAT)	yfeO →	predicted ion channel protein
RA	1,566,518	G→T	72.5%	L90L (CTG→CTT)	yfeO →	predicted ion channel protein
RA	1,566,887	T→G	40.2%	A213A (GCT→GCG)	yfeO →	predicted ion channel protein
RA	1,567,023	C→T	45.9%	L259F (CTC→TTC)	yfeO →	predicted ion channel protein
RA	1,567,424	T→C	34.5%	L392L (CTT→CTC)	yfeO →	predicted ion channel protein
RA	1,568,594	A→C	26.7%	T244T (ACT→ACG)	mntH ←	manganese/divalent cation transporter
RA	1,569,367	T→C	21.5%	intergenic (‑42/‑294)	mntH ← / → nupC	manganese/divalent cation transporter/nucleoside (except guanosine) transporter
RA	1,569,369	C→T	21.5%	intergenic (‑44/‑292)	mntH ← / → nupC	manganese/divalent cation transporter/nucleoside (except guanosine) transporter
RA	1,569,370	C→T	21.5%	intergenic (‑45/‑291)	mntH ← / → nupC	manganese/divalent cation transporter/nucleoside (except guanosine) transporter
RA	1,569,374	C→T	20.2%	intergenic (‑49/‑287)	mntH ← / → nupC	manganese/divalent cation transporter/nucleoside (except guanosine) transporter
RA	1,570,332	C→T	50.5%	I224I (ATC→ATT)	nupC →	nucleoside (except guanosine) transporter
RA	1,570,455	C→T	67.4%	A265A (GCC→GCT)	nupC →	nucleoside (except guanosine) transporter
RA	1,570,458	G→A	67.7%	A266A (GCG→GCA)	nupC →	nucleoside (except guanosine) transporter
RA	1,570,467	A→T	73.6%	A269A (GCA→GCT)	nupC →	nucleoside (except guanosine) transporter
RA	1,570,476	C→T	76.8%	A272A (GCC→GCT)	nupC →	nucleoside (except guanosine) transporter
RA	1,570,482	T→G	64.2%	V274V (GTT→GTG)	nupC →	nucleoside (except guanosine) transporter
RA	1,570,677	T→G	60.6%	A339A (GCT→GCG)	nupC →	nucleoside (except guanosine) transporter
RA	1,571,749	A→G	31.3%	V75V (GTA→GTG)	yfeC →	predicted DNA‑binding transcriptional regulator
RA	1,573,449	A→T	53.3%	T94T (ACT→ACA)	gltX ←	glutamyl‑tRNA synthetase
RA	1,576,150	G→A	34.7%	F298F (TTC→TTT)	xapB ←	xanthosine transporter
RA	1,576,174	G→C	68.6%	A290A (GCC→GCG)	xapB ←	xanthosine transporter
RA	1,576,207	G→A	77.6%	G279G (GGC→GGT)	xapB ←	xanthosine transporter
RA	1,576,210	A→G	74.0%	F278F (TTT→TTC)	xapB ←	xanthosine transporter
RA	1,576,213	T→A	72.3%	R277R (CGA→CGT)	xapB ←	xanthosine transporter
RA	1,576,219	T→C	61.5%	L275L (TTA→TTG)	xapB ←	xanthosine transporter
RA	1,576,228	T→C	38.4%	P272P (CCA→CCG)	xapB ←	xanthosine transporter
RA	1,576,231	G→T	38.3%	I271I (ATC→ATA)	xapB ←	xanthosine transporter
RA	1,576,234	A→C	37.3%	T270T (ACT→ACG)	xapB ←	xanthosine transporter
RA	1,577,649	A→G	30.2%	I96I (ATT→ATC)	xapA ←	purine nucleoside phosphorylase II
RA	1,577,658	T→C	32.7%	G93G (GGA→GGG)	xapA ←	purine nucleoside phosphorylase II
RA	1,577,897	T→C	41.5%	I14V (ATA→GTA)	xapA ←	purine nucleoside phosphorylase II
RA	1,577,902	A→T	39.1%	F12Y (TTT→TAT)	xapA ←	purine nucleoside phosphorylase II
RA	1,577,907	C→T	39.6%	P10P (CCG→CCA)	xapA ←	purine nucleoside phosphorylase II
RA	1,578,568	C→T	12.2%	H128H (CAC→CAT)	yfeN →	conserved outer membrane protein
RA	1,581,564	T→G	55.4%	A557A (GCA→GCC)	ligA ←	DNA ligase, NAD(+)‑dependent
RA	1,581,666	G→A	100%	A523A (GCC→GCT)	ligA ←	DNA ligase, NAD(+)‑dependent
RA	1,582,181	G→A	30.5%	L352L (CTG→TTG)	ligA ←	DNA ligase, NAD(+)‑dependent
RA	1,582,188	T→A	29.9%	A349A (GCA→GCT)	ligA ←	DNA ligase, NAD(+)‑dependent
RA	1,582,830	G→C	40.9%	T135T (ACC→ACG)	ligA ←	DNA ligase, NAD(+)‑dependent
RA	1,583,611	A→G	37.5%	N227N (AAT→AAC)	zipA ←	cell division protein involved in Z ring assembly
RA	1,583,785	G→A	100%	P169P (CCC→CCT)	zipA ←	cell division protein involved in Z ring assembly
RA	1,584,700	T→G	35.9%	T60T (ACT→ACG)	cysZ →	predicted inner membrane protein
RA	1,584,712	C→T	37.8%	Y64Y (TAC→TAT)	cysZ →	predicted inner membrane protein
RA	1,584,725	C→T	31.8%	L69L (CTA→TTA)	cysZ →	predicted inner membrane protein
RA	1,584,739	T→C	37.7%	S73S (AGT→AGC)	cysZ →	predicted inner membrane protein
RA	1,584,892	G→A	100%	G124G (GGG→GGA)	cysZ →	predicted inner membrane protein
RA	1,585,072	C→T	35.1%	C184C (TGC→TGT)	cysZ →	predicted inner membrane protein
RA	1,586,707	G→A	63.6%	intergenic (+269/‑115)	cysK → / → ptsH	cysteine synthase A, O‑acetylserine sulfhydrolase A subunit/phosphohistidinoprotein‑hexose phosphotransferase component of PTS system (Hpr)
RA	1,588,287	T→C	57.4%	I388I (ATT→ATC)	ptsI →	PEP‑protein phosphotransferase of PTS system
RA	1,590,071	G→A	40.8%	G75G (GGC→GGT)	pdxK ←	pyridoxal‑pyridoxamine kinase/hydroxymethylpyrimidine kinase
RA	1,590,086	G→A	44.8%	D70D (GAC→GAT)	pdxK ←	pyridoxal‑pyridoxamine kinase/hydroxymethylpyrimidine kinase
RA	1,590,191	G→C	42.9%	A35A (GCC→GCG)	pdxK ←	pyridoxal‑pyridoxamine kinase/hydroxymethylpyrimidine kinase
RA	1,590,206	C→T	31.8%	V30V (GTG→GTA)	pdxK ←	pyridoxal‑pyridoxamine kinase/hydroxymethylpyrimidine kinase
RA	1,590,559	T→G	33.7%	Y54D (TAT→GAT)	yfeK →	hypothetical protein
RA	1,593,753	C→T	40.3%	G40G (GGG→GGA)	cysA ←	sulfate/thiosulfate transporter subunit
RA	1,600,816	2 bp→AT	100%	coding (1086‑1087/1425 nt)	murP →	fused predicted enzyme IIBC components of PTS
RA	1,600,831	A→C	100%	V367V (GTA→GTC)	murP →	fused predicted enzyme IIBC components of PTS
RA	1,600,906	G→A	65.3%	K392K (AAG→AAA)	murP →	fused predicted enzyme IIBC components of PTS
RA	1,602,797	G→A	82.6%	T269T (ACC→ACT)	yfeX ←	conserved hypothetical protein
RA	1,602,820	G→A	74.9%	L262L (CTG→TTG)	yfeX ←	conserved hypothetical protein
RA	1,602,887	A→G	45.2%	T239T (ACT→ACC)	yfeX ←	conserved hypothetical protein
RA	1,602,908	G→A	39.7%	R232R (CGC→CGT)	yfeX ←	conserved hypothetical protein
RA	1,602,989	G→A	18.2%	I205I (ATC→ATT)	yfeX ←	conserved hypothetical protein
RA	1,603,274	G→A	61.9%	A110A (GCC→GCT)	yfeX ←	conserved hypothetical protein
RA	1,603,289	T→C	67.4%	V105V (GTA→GTG)	yfeX ←	conserved hypothetical protein
RA	1,603,951	G→A	27.6%	D108D (GAC→GAT)	yfeY ←	hypothetical protein
RA	1,603,960	A→G	35.0%	S105S (AGT→AGC)	yfeY ←	hypothetical protein
RA	1,605,751	T→G	31.1%	L114L (CTT→CTG)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,605,763	T→G	34.7%	V118V (GTT→GTG)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,605,781	T→C	18.3%	H124H (CAT→CAC)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,605,790	T→C	18.2%	D127D (GAT→GAC)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,605,808	T→C	20.6%	H133H (CAT→CAC)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,605,814	T→C	23.6%	D135D (GAT→GAC)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,605,817	C→T	22.9%	G136G (GGC→GGT)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,606,216	T→C	33.3%	A269A (GCT→GCC)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,606,276	A→G	47.5%	R289R (CGA→CGG)	amiA →	N‑acetylmuramoyl‑l‑alanine amidase I
RA	1,606,282	T→G	57.6%	intergenic (+3/‑1)	amiA → / → hemF	N‑acetylmuramoyl‑l‑alanine amidase I/coproporphyrinogen III oxidase
RA	1,606,349	C→T	30.6%	L23L (CTG→TTG)	hemF →	coproporphyrinogen III oxidase
RA	1,606,933	C→A	31.0%	V217V (GTC→GTA)	hemF →	coproporphyrinogen III oxidase
RA	1,606,942	G→A	30.6%	R220R (CGG→CGA)	hemF →	coproporphyrinogen III oxidase
RA	1,607,584	G→C	58.3%	A219A (GCC→GCG)	yfeG ←	predicted DNA‑binding transcriptional regulator
RA	1,609,750	A→T	28.5%	V202V (GTT→GTA)	eutC ←	ethanolamine ammonia‑lyase, small subunit (light chain)
RA	1,609,762	T→C	43.7%	T198T (ACA→ACG)	eutC ←	ethanolamine ammonia‑lyase, small subunit (light chain)
RA	1,609,783	C→T	34.9%	Q191Q (CAG→CAA)	eutC ←	ethanolamine ammonia‑lyase, small subunit (light chain)
RA	1,609,786	T→C	45.9%	K190K (AAA→AAG)	eutC ←	ethanolamine ammonia‑lyase, small subunit (light chain)
RA	1,610,182	A→C	100%	V58V (GTT→GTG)	eutC ←	ethanolamine ammonia‑lyase, small subunit (light chain)
RA	1,610,811	T→C	75.7%	A309A (GCA→GCG)	eutB ←	ethanolamine ammonia‑lyase, large subunit, heavy chain
RA	1,610,862	A→C	63.0%	S292S (TCT→TCG)	eutB ←	ethanolamine ammonia‑lyase, large subunit, heavy chain
RA	1,610,889	G→A	46.5%	C283C (TGC→TGT)	eutB ←	ethanolamine ammonia‑lyase, large subunit, heavy chain
RA	1,611,069	A→G	100%	C223C (TGT→TGC)	eutB ←	ethanolamine ammonia‑lyase, large subunit, heavy chain
RA	1,611,483	G→A	47.3%	Y85Y (TAC→TAT)	eutB ←	ethanolamine ammonia‑lyase, large subunit, heavy chain
RA	1,611,501	A→G	50.8%	D79D (GAT→GAC)	eutB ←	ethanolamine ammonia‑lyase, large subunit, heavy chain
RA	1,612,061	A→G	36.0%	D364D (GAT→GAC) ‡	eutA ←	reactivating factor for ethanolamine ammonia lyase
RA	1,612,062	T→C	36.0%	D364G (GAT→GGT) ‡	eutA ←	reactivating factor for ethanolamine ammonia lyase
RA	1,612,063	C→A	36.0%	D364Y (GAT→TAT) ‡	eutA ←	reactivating factor for ethanolamine ammonia lyase
RA	1,612,073	C→T	44.1%	Q360Q (CAG→CAA)	eutA ←	reactivating factor for ethanolamine ammonia lyase
RA	1,612,166	A→C	57.0%	L329L (CTT→CTG)	eutA ←	reactivating factor for ethanolamine ammonia lyase
RA	1,612,202	C→A	84.0%	A317A (GCG→GCT)	eutA ←	reactivating factor for ethanolamine ammonia lyase
RA	1,612,205	G→A	84.1%	G316G (GGC→GGT)	eutA ←	reactivating factor for ethanolamine ammonia lyase
RA	1,613,635	C→G	39.3%	L247L (CTG→CTC)	eutH ←	predicted inner membrane protein
RA	1,613,998	A→G	48.7%	I126I (ATT→ATC)	eutH ←	predicted inner membrane protein
RA	1,614,031	G→A	40.6%	G115G (GGC→GGT)	eutH ←	predicted inner membrane protein
RA	1,614,100	C→T	32.6%	S92S (TCG→TCA)	eutH ←	predicted inner membrane protein
RA	1,614,103	T→C	32.6%	P91P (CCA→CCG)	eutH ←	predicted inner membrane protein
RA	1,614,459	T→C	60.6%	intergenic (‑84/+133)	eutH ← / ← eutG	predicted inner membrane protein/predicted alcohol dehydrogenase in ethanolamine utilization
RA	1,614,829	G→C	54.0%	R317R (CGC→CGG)	eutG ←	predicted alcohol dehydrogenase in ethanolamine utilization
RA	1,614,832	T→A	57.7%	E316D (GAA→GAT)	eutG ←	predicted alcohol dehydrogenase in ethanolamine utilization
RA	1,616,492	G→A	65.3%	T38T (ACC→ACT)	eutJ ←	predicted chaperonin, ethanolamine utilization protein
RA	1,616,715	G→C	100%	T435T (ACC→ACG)	eutE ←	predicted aldehyde dehydrogenase, ethanolamine utilization protein
RA	1,616,754	G→A	100%	C422C (TGC→TGT)	eutE ←	predicted aldehyde dehydrogenase, ethanolamine utilization protein
RA	1,616,820	G→A	42.2%	N400N (AAC→AAT)	eutE ←	predicted aldehyde dehydrogenase, ethanolamine utilization protein
RA	1,619,764	C→T	51.4%	E4K (GAA→AAA)	eutI ←	predicted phosphotransacetylase subunit
RA	1,620,888	A→G	52.1%	S128S (AGT→AGC)	eutQ ←	conserved hypothetical protein
RA	1,620,900	C→A	47.4%	V124V (GTG→GTT)	eutQ ←	conserved hypothetical protein
RA	1,621,151	G→A	75.1%	L41L (CTG→TTG)	eutQ ←	conserved hypothetical protein
RA	1,621,152	T→C	75.2%	L40L (CTA→CTG)	eutQ ←	conserved hypothetical protein
RA	1,621,158	C→A	72.4%	A38A (GCG→GCT)	eutQ ←	conserved hypothetical protein
RA	1,621,531	T→C	60.9%	V65V (GTA→GTG)	eutP ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,622,426	C→T	24.2%	V740V (GTG→GTA)	maeB ←	fused malic enzyme predicted oxidoreductase and predicted phosphotransacetylase
RA	1,622,669	T→C	48.3%	A659A (GCA→GCG)	maeB ←	fused malic enzyme predicted oxidoreductase and predicted phosphotransacetylase
RA	1,622,786	G→A	23.2%	V620V (GTC→GTT)	maeB ←	fused malic enzyme predicted oxidoreductase and predicted phosphotransacetylase
RA	1,622,834	C→A	36.7%	P604P (CCG→CCT)	maeB ←	fused malic enzyme predicted oxidoreductase and predicted phosphotransacetylase
RA	1,622,837	T→C	35.6%	E603E (GAA→GAG)	maeB ←	fused malic enzyme predicted oxidoreductase and predicted phosphotransacetylase
RA	1,625,674	A→G	38.6%	L247L (TTA→TTG)	talA →	transaldolase A
RA	1,625,686	G→A	48.9%	L251L (CTG→CTA)	talA →	transaldolase A
RA	1,625,936	C→T	39.3%	R11R (CGC→CGT)	tktB →	transketolase 2, thiamin‑binding
RA	1,625,969	C→T	39.3%	N22N (AAC→AAT)	tktB →	transketolase 2, thiamin‑binding
RA	1,626,692	A→G	40.0%	P263P (CCA→CCG)	tktB →	transketolase 2, thiamin‑binding
RA	1,626,710	G→A	21.4%	V269V (GTG→GTA)	tktB →	transketolase 2, thiamin‑binding
RA	1,626,713	G→T	21.9%	A270A (GCG→GCT)	tktB →	transketolase 2, thiamin‑binding
RA	1,628,383	C→T	64.6%	L221L (TTG→TTA)	ypfG ←	hypothetical protein
RA	1,628,386	T→C	67.8%	P220P (CCA→CCG)	ypfG ←	hypothetical protein
RA	1,628,398	G→A	63.0%	C216C (TGC→TGT)	ypfG ←	hypothetical protein
RA	1,629,040	G→T	49.3%	R2R (CGC→CGA)	ypfG ←	hypothetical protein
RA	1,629,190	G→A	57.0%	T186M (ACG→ATG)	yffH ←	predicted NUDIX hydrolase
RA	1,629,654	G→A	37.8%	D31D (GAC→GAT)	yffH ←	predicted NUDIX hydrolase
RA	1,630,243	G→A	47.9%	R517R (CGC→CGT)	aegA ←	fused predicted FeS binding subunit and predicted NAD/FAD‑binding subunit of oxidoreductase
RA	1,631,650	T→C	43.5%	Q48Q (CAA→CAG)	aegA ←	fused predicted FeS binding subunit and predicted NAD/FAD‑binding subunit of oxidoreductase
RA	1,632,211	C→T	42.2%	R71R (CGC→CGT)	narQ →	sensory histidine kinase in two‑component regulatory system with NarP (NarL)
RA	1,632,688	A→G	31.9%	E230E (GAA→GAG)	narQ →	sensory histidine kinase in two‑component regulatory system with NarP (NarL)
RA	1,633,534	T→C	45.6%	G512G (GGT→GGC)	narQ →	sensory histidine kinase in two‑component regulatory system with NarP (NarL)
RA	1,633,561	T→C	60.5%	G521G (GGT→GGC)	narQ →	sensory histidine kinase in two‑component regulatory system with NarP (NarL)
RA	1,634,474	T→C	41.6%	T204T (ACT→ACC)	acrD →	aminoglycoside/multidrug efflux system
RA	1,639,499	G→A	53.7%	D180D (GAC→GAT)	ypfH ←	predicted hydrolase
RA	1,639,502	A→G	53.9%	G179G (GGT→GGC)	ypfH ←	predicted hydrolase
RA	1,639,640	A→G	60.1%	A133A (GCT→GCC)	ypfH ←	predicted hydrolase
RA	1,642,040	C→G	31.2%	G30R (GGT→CGT)	ypfI ←	predicted hydrolase
RA	1,646,159	A→G	53.5%	intergenic (‑131/‑15)	dapA ← / → gcvR	dihydrodipicolinate synthase/DNA‑binding transcriptional repressor, regulatory protein accessory to GcvA
RA	1,646,236	T→A	40.0%	I21I (ATT→ATA)	gcvR →	DNA‑binding transcriptional repressor, regulatory protein accessory to GcvA
RA	1,649,709	A→G	43.7%	A310A (GCA→GCG)	yfgC →	predicted peptidase
RA	1,649,712	A→G	43.7%	A311A (GCA→GCG)	yfgC →	predicted peptidase
RA	1,649,829	T→C	60.9%	T350T (ACT→ACC)	yfgC →	predicted peptidase
RA	1,650,803	A→G	100%	R235R (CGT→CGC)	hda ←	ATPase regulatory factor involved in DnaA inactivation
RA	1,653,313	A→C	100%	G82G (GGT→GGG)	upp ←	uracil phosphoribosyltransferase
RA	1,653,633	C→A	30.8%	intergenic (‑75/‑250)	upp ← / → purM	uracil phosphoribosyltransferase/phosphoribosylaminoimidazole synthetase
RA	1,654,260	T→C	51.6%	I126I (ATT→ATC)	purM →	phosphoribosylaminoimidazole synthetase
RA	1,654,281	A→G	45.5%	S133S (TCA→TCG)	purM →	phosphoribosylaminoimidazole synthetase
RA	1,655,091	G→A	62.1%	A58T (GCC→ACC)	purN →	phosphoribosylglycinamide formyltransferase 1
RA	1,657,292	G→A	45.9%	E521E (GAG→GAA)	ppk →	polyphosphate kinase, component of RNA degradosome
RA	1,657,322	T→C	72.0%	S531S (AGT→AGC)	ppk →	polyphosphate kinase, component of RNA degradosome
RA	1,657,763	T→C	33.3%	Y678Y (TAT→TAC)	ppk →	polyphosphate kinase, component of RNA degradosome
RA	1,657,788	C→T	34.4%	P687S (CCT→TCT)	ppk →	polyphosphate kinase, component of RNA degradosome
RA	1,657,998	A→G	45.8%	L66L (TTA→TTG)	ppx →	exopolyphosphatase
RA	1,658,013	G→A	45.8%	L71L (CTG→CTA)	ppx →	exopolyphosphatase
RA	1,658,023	C→A	38.5%	R75R (CGG→AGG)	ppx →	exopolyphosphatase
RA	1,658,583	G→A	56.3%	P261P (CCG→CCA)	ppx →	exopolyphosphatase
RA	1,660,973	G→T	24.9%	L218I (CTC→ATC)	yfgF ←	predicted inner membrane protein
RA	1,660,974	C→T	24.8%	A217A (GCG→GCA)	yfgF ←	predicted inner membrane protein
RA	1,661,722	T→A	13.5%	intergenic (‑98/‑254)	yfgF ← / → yfgG	predicted inner membrane protein/hypothetical protein
RA	1,661,747	A→T	24.6%	intergenic (‑123/‑229)	yfgF ← / → yfgG	predicted inner membrane protein/hypothetical protein
RA	1,664,030	G→A	57.0%	L398L (CTG→TTG)	guaA ←	GMP synthetase
RA	1,664,037	G→A	64.5%	Y395Y (TAC→TAT)	guaA ←	GMP synthetase
RA	1,664,043	C→T	64.5%	L393L (CTG→CTA)	guaA ←	GMP synthetase
RA	1,664,496	T→A	52.2%	V242V (GTA→GTT)	guaA ←	GMP synthetase
RA	1,664,511	A→G	44.8%	G237G (GGT→GGC)	guaA ←	GMP synthetase
RA	1,665,156	C→T	35.6%	L22L (CTG→CTA)	guaA ←	GMP synthetase
RA	1,665,980	T→C	42.4%	Q259Q (CAA→CAG)	guaB ←	IMP dehydrogenase
RA	1,665,986	T→A	61.9%	V257V (GTA→GTT)	guaB ←	IMP dehydrogenase
RA	1,665,995	T→A	44.1%	S254S (TCA→TCT)	guaB ←	IMP dehydrogenase
RA	1,669,173	T→C	33.7%	L290L (TTA→TTG)	der ←	predicted GTP‑binding protein
RA	1,671,075	A→G	37.5%	D88D (GAT→GAC)	yfgL ←	protein assembly complex, lipoprotein component
RA	1,672,344	A→C	49.6%	A306A (GCT→GCG)	hisS ←	histidyl tRNA synthetase
RA	1,672,356	A→T	49.6%	A302A (GCT→GCA)	hisS ←	histidyl tRNA synthetase
RA	1,672,374	G→A	42.1%	G296G (GGC→GGT)	hisS ←	histidyl tRNA synthetase
RA	1,676,004	G→A	59.7%	S322S (AGC→AGT)	yfgB ←	hypothetical protein
RA	1,676,325	T→C	46.5%	V215V (GTA→GTG)	yfgB ←	hypothetical protein
RA	1,677,332	C→A	38.7%	V73V (GTG→GTT)	ndk ←	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase
RA	1,677,347	G→A	39.1%	T68T (ACC→ACT)	ndk ←	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase
RA	1,677,486	T→C	54.0%	N22S (AAT→AGT)	ndk ←	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase
RA	1,677,494	G→C	51.9%	V19V (GTC→GTG)	ndk ←	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase
RA	1,677,666	A→C	24.4%	intergenic (‑116/+33)	ndk ← / ← pbpC	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase/fused transglycosylase and transpeptidase
RA	1,677,667	T→C	24.3%	intergenic (‑117/+32)	ndk ← / ← pbpC	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase/fused transglycosylase and transpeptidase
RA	1,677,668	G→C	24.7%	intergenic (‑118/+31)	ndk ← / ← pbpC	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase/fused transglycosylase and transpeptidase
RA	1,677,674	T→A	28.5%	intergenic (‑124/+25)	ndk ← / ← pbpC	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase/fused transglycosylase and transpeptidase
RA	1,677,695	C→T	38.4%	intergenic (‑145/+4)	ndk ← / ← pbpC	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase/fused transglycosylase and transpeptidase
RA	1,678,452	G→A	68.0%	D520D (GAC→GAT)	pbpC ←	fused transglycosylase and transpeptidase
RA	1,679,130	C→T	40.9%	R294R (CGG→CGA)	pbpC ←	fused transglycosylase and transpeptidase
RA	1,679,133	C→T	39.7%	G293G (GGG→GGA)	pbpC ←	fused transglycosylase and transpeptidase
RA	1,679,847	G→A	29.9%	R55R (CGC→CGT)	pbpC ←	fused transglycosylase and transpeptidase
RA	1,680,201	A→T	68.4%	I1591I (ATT→ATA)	yfhM ←	conserved hypothetical protein
RA	1,680,429	A→G	36.7%	D1515D (GAT→GAC)	yfhM ←	conserved hypothetical protein
RA	1,680,438	A→C	33.0%	L1512L (CTT→CTG)	yfhM ←	conserved hypothetical protein
RA	1,680,453	G→A	38.4%	I1507I (ATC→ATT)	yfhM ←	conserved hypothetical protein
RA	1,680,469	T→C	37.5%	N1502S (AAC→AGC)	yfhM ←	conserved hypothetical protein
RA	1,680,544	C→G	44.2%	S1477T (AGC→ACC)	yfhM ←	conserved hypothetical protein
RA	1,680,559	A→G	43.0%	V1472A (GTC→GCC)	yfhM ←	conserved hypothetical protein
RA	1,680,919	G→A	66.0%	T1352I (ACC→ATC)	yfhM ←	conserved hypothetical protein
RA	1,681,250	G→A	30.8%	L1242L (CTG→TTG)	yfhM ←	conserved hypothetical protein
RA	1,682,040	G→A	35.6%	N978N (AAC→AAT)	yfhM ←	conserved hypothetical protein
RA	1,682,068	A→G	38.1%	V969A (GTG→GCG)	yfhM ←	conserved hypothetical protein
RA	1,682,563	C→G	64.8%	R804P (CGG→CCG)	yfhM ←	conserved hypothetical protein
RA	1,683,045	G→A	62.0%	G643G (GGC→GGT)	yfhM ←	conserved hypothetical protein
RA	1,683,429	A→G	50.0%	G515G (GGT→GGC)	yfhM ←	conserved hypothetical protein
RA	1,683,516	G→A	16.2%	R486R (CGC→CGT)	yfhM ←	conserved hypothetical protein
RA	1,683,719	T→C	57.0%	N419D (AAT→GAT)	yfhM ←	conserved hypothetical protein
RA	1,683,726	C→T	59.4%	A416A (GCG→GCA)	yfhM ←	conserved hypothetical protein
RA	1,686,595	G→A	39.0%	intergenic (+570/+248)	sseA → / ← sseB	3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate
RA	1,687,119	C→T	54.0%	P167P (CCG→CCA)	sseB ←	rhodanase‑like enzyme, sulfur transfer from thiosulfate
RA	1,687,227	G→A	100%	S131S (AGC→AGT)	sseB ←	rhodanase‑like enzyme, sulfur transfer from thiosulfate
RA	1,687,235	G→A	100%	P129S (CCG→TCG)	sseB ←	rhodanase‑like enzyme, sulfur transfer from thiosulfate
RA	1,687,239	T→C	100%	G127G (GGA→GGG)	sseB ←	rhodanase‑like enzyme, sulfur transfer from thiosulfate
RA	1,687,242	C→T	75.1%	E126E (GAG→GAA)	sseB ←	rhodanase‑like enzyme, sulfur transfer from thiosulfate
RA	1,688,153	T→G	30.9%	M298L (ATG→CTG)	pepB ←	aminopeptidase B
RA	1,688,613	A→G	67.6%	Y144Y (TAT→TAC)	pepB ←	aminopeptidase B
RA	1,688,631	C→T	65.4%	A138A (GCG→GCA)	pepB ←	aminopeptidase B
RA	1,688,958	G→A	47.6%	D29D (GAC→GAT)	pepB ←	aminopeptidase B
RA	1,688,979	T→C	25.3%	A22A (GCA→GCG)	pepB ←	aminopeptidase B
RA	1,688,994	G→A	20.4%	R17R (CGC→CGT)	pepB ←	aminopeptidase B
RA	1,688,997	C→T	20.3%	A16A (GCG→GCA)	pepB ←	aminopeptidase B
RA	1,689,310	T→G	47.1%	D38A (GAT→GCT)	yfhJ ←	conserved hypothetical protein
RA	1,690,443	T→C	37.4%	P393P (CCA→CCG)	hscA ←	DnaK‑like molecular chaperone specific for IscU
RA	1,690,455	A→C	36.5%	L389L (CTT→CTG)	hscA ←	DnaK‑like molecular chaperone specific for IscU
RA	1,690,476	T→C	45.8%	P382P (CCA→CCG)	hscA ←	DnaK‑like molecular chaperone specific for IscU
RA	1,693,353	G→A	26.6%	L289L (CTG→TTG)	iscS ←	cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent
RA	1,695,242	A→G	100%	intergenic (‑425/+27)	iscR ← / ← yfhQ	DNA‑binding transcriptional activator/predicted methyltransferase
RA	1,695,246	C→A	100%	intergenic (‑429/+23)	iscR ← / ← yfhQ	DNA‑binding transcriptional activator/predicted methyltransferase
RA	1,695,249	G→A	100%	intergenic (‑432/+20)	iscR ← / ← yfhQ	DNA‑binding transcriptional activator/predicted methyltransferase
RA	1,696,724	T→C	53.7%	R199R (CGT→CGC)	suhB →	inositol monophosphatase
RA	1,697,000	T→C	24.3%	intergenic (+69/‑49)	suhB → / → yfhR	inositol monophosphatase/predicted peptidase
RA	1,697,162	T→C	37.2%	V38V (GTT→GTC)	yfhR →	predicted peptidase
RA	1,698,218	T→C	43.3%	M33T (ATG→ACG)	csiE →	stationary phase inducible protein
RA	1,698,225	C→T	44.2%	T35T (ACC→ACT)	csiE →	stationary phase inducible protein
RA	1,698,435	A→T	58.7%	Q105H (CAA→CAT)	csiE →	stationary phase inducible protein
RA	1,698,732	A→G	41.7%	P204P (CCA→CCG)	csiE →	stationary phase inducible protein
RA	1,698,757	C→T	39.4%	L213L (CTA→TTA)	csiE →	stationary phase inducible protein
RA	1,698,852	T→C	25.8%	H244H (CAT→CAC)	csiE →	stationary phase inducible protein
RA	1,699,077	T→C	38.9%	S319S (AGT→AGC)	csiE →	stationary phase inducible protein
RA	1,699,098	C→T	36.4%	F326F (TTC→TTT)	csiE →	stationary phase inducible protein
RA	1,707,042	G→A	15.0%	V111V (GTC→GTT)	yphB ←	conserved hypothetical protein
RA	1,707,052	C→A	10.8%	R108L (CGC→CTC)	yphB ←	conserved hypothetical protein
RA	1,707,075	A→G	24.2%	S100S (AGT→AGC)	yphB ←	conserved hypothetical protein
RA	1,707,088	T→C	24.9%	H96R (CAC→CGC)	yphB ←	conserved hypothetical protein
RA	1,707,359	A→G	100%	L6L (TTA→CTA)	yphB ←	conserved hypothetical protein
RA	1,707,743	A→T	40.0%	I235I (ATT→ATA)	yphC ←	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	1,707,754	G→T	30.5%	L232M (CTG→ATG)	yphC ←	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	1,709,926	C→T	58.0%	V374V (GTG→GTA)	yphE ←	fused predicted sugar transporter subunits and ATP‑binding components of ABC superfamily
RA	1,712,949	G→A	40.0%	A828V (GCC→GTC)	yphG ←	conserved hypothetical protein
RA	1,712,951	T→A	37.7%	G827G (GGA→GGT)	yphG ←	conserved hypothetical protein
RA	1,712,954	A→G	42.6%	S826S (AGT→AGC)	yphG ←	conserved hypothetical protein
RA	1,714,265	A→G	53.0%	G389G (GGT→GGC)	yphG ←	conserved hypothetical protein
RA	1,714,466	G→A	32.1%	N322N (AAC→AAT)	yphG ←	conserved hypothetical protein
RA	1,714,472	G→C	32.0%	A320A (GCC→GCG)	yphG ←	conserved hypothetical protein
RA	1,714,688	A→G	28.3%	P248P (CCT→CCC)	yphG ←	conserved hypothetical protein
RA	1,716,655	G→A	19.0%	T369T (ACG→ACA)	yphH →	predicted DNA‑binding transcriptional regulator
RA	1,716,658	A→G	21.8%	Q370Q (CAA→CAG)	yphH →	predicted DNA‑binding transcriptional regulator
RA	1,717,117	G→A	37.7%	T359T (ACC→ACT)	glyA ←	serine hydroxymethyltransferase
RA	1,717,162	G→C	32.1%	V344V (GTC→GTG)	glyA ←	serine hydroxymethyltransferase
RA	1,725,308	G→A	45.4%	F974F (TTC→TTT)	purL ←	phosphoribosylformyl‑glycineamide synthetase
RA	1,726,985	G→A	100%	G415G (GGC→GGT)	purL ←	phosphoribosylformyl‑glycineamide synthetase
RA	1,727,498	A→G	30.8%	T244T (ACT→ACC)	purL ←	phosphoribosylformyl‑glycineamide synthetase
RA	1,727,501	A→G	30.8%	N243N (AAT→AAC)	purL ←	phosphoribosylformyl‑glycineamide synthetase
RA	1,727,747	A→T	46.3%	V161V (GTT→GTA)	purL ←	phosphoribosylformyl‑glycineamide synthetase
RA	1,727,756	A→G	46.4%	V158V (GTT→GTC)	purL ←	phosphoribosylformyl‑glycineamide synthetase
RA	1,728,960	T→C	66.3%	H112H (CAT→CAC)	yfhD →	predicted transglycosylase
RA	1,728,993	A→C	45.5%	E123D (GAA→GAC)	yfhD →	predicted transglycosylase
RA	1,730,046	C→T	36.0%	T177T (ACG→ACA)	tadA ←	tRNA‑specific adenosine deaminase
RA	1,732,510	C→T	51.7%	C54C (TGC→TGT)	yfhL →	predicted 4Fe‑4S cluster‑containing protein
RA	1,732,555	A→G	48.9%	T69T (ACA→ACG)	yfhL →	predicted 4Fe‑4S cluster‑containing protein
RA	1,733,340	C→G	51.4%	R115R (CGG→CGC)	acpS ←	holo‑[acyl‑carrier‑protein] synthase 1
RA	1,733,349	T→G	51.5%	A112A (GCA→GCC)	acpS ←	holo‑[acyl‑carrier‑protein] synthase 1
RA	1,733,352	C→A	50.9%	L111L (CTG→CTT)	acpS ←	holo‑[acyl‑carrier‑protein] synthase 1
RA	1,733,864	G→A	45.9%	S184S (AGC→AGT)	pdxJ ←	pyridoxine 5'‑phosphate synthase
RA	1,737,138	G→A	100%	G286G (GGC→GGT)	lepB ←	leader peptidase
RA	1,737,305	G→A	47.4%	L231L (CTG→TTG)	lepB ←	leader peptidase
RA	1,738,392	C→T	33.2%	K473K (AAG→AAA)	lepA ←	GTP binding membrane protein
RA	1,738,596	C→T	41.0%	E405E (GAG→GAA)	lepA ←	GTP binding membrane protein
RA	1,741,977	T→C	36.1%	L38L (TTA→TTG)	rseA ←	anti‑sigma factor
RA	1,743,369	C→T	32.4%	S88S (AGC→AGT)	nadB →	quinolinate synthase, L‑aspartate oxidase (B protein) subunit
RA	1,747,578	G→C	38.6%	G143G (GGC→GGG)	yfiE ←	predicted DNA‑binding transcriptional regulator
RA	1,747,581	A→G	39.2%	V142V (GTT→GTC)	yfiE ←	predicted DNA‑binding transcriptional regulator
RA	1,749,239	A→T	40.2%	intergenic (‑104/‑201)	yfiD ← / → ung	pyruvate formate lyase subunit/uracil‑DNA‑glycosylase
RA	1,750,507	C→A	100%	S236S (TCG→TCT)	yfiF ←	predicted methyltransferase
RA	1,756,432	T→C	53.8%	N340N (AAT→AAC)	pssA →	phosphatidylserine synthase
RA	1,756,442	C→T	45.1%	L344L (CTA→TTA)	pssA →	phosphatidylserine synthase
RA	1,756,447	G→A	44.4%	V345V (GTG→GTA)	pssA →	phosphatidylserine synthase
RA	1,758,112	C→T	28.5%	S107S (TCG→TCA)	kgtP ←	alpha‑ketoglutarate transporter
RA	1,758,115	T→G	28.0%	G106G (GGA→GGC)	kgtP ←	alpha‑ketoglutarate transporter
RA	1,763,556	T→C	72.0%	noncoding (288/1542 nt)	rrsG ←	16S ribosomal RNA
RA	1,763,636	A→G	36.1%	noncoding (208/1542 nt)	rrsG ←	16S ribosomal RNA
RA	1,764,751	T→C	36.8%	Q703Q (CAA→CAG)	clpB ←	protein disaggregation chaperone
RA	1,765,891	A→G	59.0%	I323I (ATT→ATC)	clpB ←	protein disaggregation chaperone
RA	1,766,035	T→C	58.1%	L275L (CTA→CTG)	clpB ←	protein disaggregation chaperone
RA	1,767,900	T→C	30.4%	A266A (GCA→GCG)	rluD ←	23S rRNA pseudouridine synthase
RA	1,768,173	C→T	65.9%	A175A (GCG→GCA)	rluD ←	23S rRNA pseudouridine synthase
RA	1,770,511	A→G	71.1%	E27E (GAA→GAG)	pheA →	fused chorismate mutase P and prephenate dehydratase
RA	1,771,324	C→G	33.6%	T298T (ACC→ACG)	pheA →	fused chorismate mutase P and prephenate dehydratase
RA	1,771,345	G→A	49.5%	G305G (GGG→GGA)	pheA →	fused chorismate mutase P and prephenate dehydratase
RA	1,771,354	C→T	57.3%	A308A (GCC→GCT)	pheA →	fused chorismate mutase P and prephenate dehydratase
RA	1,771,360	G→A	48.3%	A310A (GCG→GCA)	pheA →	fused chorismate mutase P and prephenate dehydratase
RA	1,771,423	C→T	34.9%	R331R (CGC→CGT)	pheA →	fused chorismate mutase P and prephenate dehydratase
RA	1,772,153	A→G	43.8%	G201G (GGT→GGC)	tyrA ←	fused chorismate mutase T and prephenate dehydrogenase
RA	1,772,441	G→A	47.4%	G105G (GGC→GGT)	tyrA ←	fused chorismate mutase T and prephenate dehydrogenase
RA	1,772,459	A→G	39.4%	R99R (CGT→CGC)	tyrA ←	fused chorismate mutase T and prephenate dehydrogenase
RA	1,772,477	T→C	43.3%	T93T (ACA→ACG)	tyrA ←	fused chorismate mutase T and prephenate dehydrogenase
RA	1,775,329	G→C	34.5%	G87G (GGG→GGC)	yfiN →	predicted diguanylate cyclase
RA	1,775,995	C→A	36.7%	I309I (ATC→ATA)	yfiN →	predicted diguanylate cyclase
RA	1,776,358	G→T	33.3%	L16L (CTG→CTT)	yfiB →	predicted outer membrane lipoprotein
RA	1,779,576	C→T	55.7%	S302S (TCG→TCA)	ffh ←	Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
RA	1,779,750	G→A	64.7%	G244G (GGC→GGT)	ffh ←	Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
RA	1,780,767	T→C	41.3%	I65I (ATT→ATC)	ypjD →	predicted inner membrane protein
RA	1,781,070	C→T	45.4%	A166A (GCC→GCT)	ypjD →	predicted inner membrane protein
RA	1,781,672	C→T	16.7%	N41N (AAC→AAT)	yfjD →	predicted inner membrane protein
RA	1,781,684	T→C	19.1%	I45I (ATT→ATC)	yfjD →	predicted inner membrane protein
RA	1,781,690	C→T	18.6%	A47A (GCC→GCT)	yfjD →	predicted inner membrane protein
RA	1,781,696	G→A	18.8%	A49A (GCG→GCA)	yfjD →	predicted inner membrane protein
RA	1,781,711	T→C	15.1%	V54V (GTT→GTC)	yfjD →	predicted inner membrane protein
RA	1,781,720	T→C	25.6%	R57R (CGT→CGC)	yfjD →	predicted inner membrane protein
RA	1,781,726	C→T	23.3%	Y59Y (TAC→TAT)	yfjD →	predicted inner membrane protein
RA	1,781,735	G→T	37.6%	A62A (GCG→GCT)	yfjD →	predicted inner membrane protein
RA	1,781,756	T→C	45.7%	G69G (GGT→GGC)	yfjD →	predicted inner membrane protein
RA	1,781,765	T→C	34.4%	T72T (ACT→ACC)	yfjD →	predicted inner membrane protein
RA	1,781,768	T→C	34.4%	F73F (TTT→TTC)	yfjD →	predicted inner membrane protein
RA	1,781,771	C→A	33.3%	V74V (GTC→GTA)	yfjD →	predicted inner membrane protein
RA	1,781,774	A→G	48.4%	V75V (GTA→GTG)	yfjD →	predicted inner membrane protein
RA	1,781,789	G→A	57.7%	E80E (GAG→GAA)	yfjD →	predicted inner membrane protein
RA	1,782,512	C→T	44.1%	I321I (ATC→ATT)	yfjD →	predicted inner membrane protein
RA	1,782,521	C→T	38.9%	T324T (ACC→ACT)	yfjD →	predicted inner membrane protein
RA	1,782,942	C→T	53.3%	P151P (CCG→CCA)	grpE ←	heat shock protein
RA	1,784,663	C→T	46.1%	R61R (CGC→CGT)	recN →	recombination and repair protein
RA	1,784,666	T→C	43.9%	A62A (GCT→GCC)	recN →	recombination and repair protein
RA	1,786,533	A→T	51.7%	P81P (CCA→CCT)	smpA →	small membrane lipoprotein
RA	1,786,551	T→G	34.0%	T87T (ACT→ACG)	smpA →	small membrane lipoprotein
RA	1,787,112	A→G	100%	C113C (TGT→TGC)	yfjG ←	conserved hypothetical protein
RA	1,787,118	C→G	100%	E111D (GAG→GAC)	yfjG ←	conserved hypothetical protein
RA	1,790,943	C→T	44.9%	I263I (ATC→ATT)	gabD →	succinate‑semialdehyde dehydrogenase I, NADP‑dependent
RA	1,790,961	C→T	100%	D269D (GAC→GAT)	gabD →	succinate‑semialdehyde dehydrogenase I, NADP‑dependent
RA	1,790,967	C→T	100%	D271D (GAC→GAT)	gabD →	succinate‑semialdehyde dehydrogenase I, NADP‑dependent
RA	1,792,351	G→A	100%	A245A (GCG→GCA)	gabT →	4‑aminobutyrate aminotransferase, PLP‑dependent
RA	1,793,299	G→A	41.4%	G55G (GGG→GGA)	gabP →	gamma‑aminobutyrate transporter
RA	1,793,300	C→T	41.4%	L56L (CTA→TTA)	gabP →	gamma‑aminobutyrate transporter
RA	1,793,548	T→C	58.8%	T138T (ACT→ACC)	gabP →	gamma‑aminobutyrate transporter
RA	1,793,557	C→T	37.2%	N141N (AAC→AAT)	gabP →	gamma‑aminobutyrate transporter
RA	1,793,884	A→G	56.5%	L250L (TTA→TTG)	gabP →	gamma‑aminobutyrate transporter
RA	1,794,406	T→C	44.6%	R424R (CGT→CGC)	gabP →	gamma‑aminobutyrate transporter
RA	1,798,738	C→T	9.9%	L253L (CTC→CTT)	proV →	glycine betaine transporter subunit
RA	1,798,765	T→A	13.5%	R262R (CGT→CGA)	proV →	glycine betaine transporter subunit
RA	1,799,411	C→T	50.7%	F79F (TTC→TTT)	proW →	glycine betaine transporter subunit
RA	1,799,423	C→T	45.9%	F83F (TTC→TTT)	proW →	glycine betaine transporter subunit
RA	1,799,450	T→C	27.6%	Y92Y (TAT→TAC)	proW →	glycine betaine transporter subunit
RA	1,800,617	G→A	44.4%	G107G (GGG→GGA)	proX →	glycine betaine transporter subunit
RA	1,801,836	G→A	51.5%	pseudogene (60/882 nt)	ygaY →	ECK2675:JW5428:b2681; predicted transporter
RA	1,801,863	T→C	74.0%	pseudogene (87/882 nt)	ygaY →	ECK2675:JW5428:b2681; predicted transporter
RA	1,802,088	T→C	48.4%	pseudogene (312/882 nt)	ygaY →	ECK2675:JW5428:b2681; predicted transporter
RA	1,802,101	G→A	46.2%	pseudogene (325/882 nt)	ygaY →	ECK2675:JW5428:b2681; predicted transporter
RA	1,802,106	A→G	52.6%	pseudogene (330/882 nt)	ygaY →	ECK2675:JW5428:b2681; predicted transporter
RA	1,802,502	T→C	29.3%	pseudogene (726/882 nt)	ygaY →	ECK2675:JW5428:b2681; predicted transporter
RA	1,803,541	A→G	45.8%	L11L (CTA→CTG)	ygaH →	predicted inner membrane protein
RA	1,803,549	T→C	51.0%	V14A (GTG→GCG)	ygaH →	predicted inner membrane protein
RA	1,803,572	T→C	44.3%	L22L (TTG→CTG)	ygaH →	predicted inner membrane protein
RA	1,804,090	G→A	90.1%	G52G (GGG→GGA)	mprA →	DNA‑binding transcriptional regulator
RA	1,806,227	C→T	37.8%	V149V (GTC→GTT)	emrB →	multidrug efflux system protein
RA	1,806,641	T→G	100%	A287A (GCT→GCG)	emrB →	multidrug efflux system protein
RA	1,807,019	C→T	60.1%	G413G (GGC→GGT)	emrB →	multidrug efflux system protein
RA	1,807,025	G→C	61.1%	S415S (TCG→TCC)	emrB →	multidrug efflux system protein
RA	1,807,031	C→G	48.7%	T417T (ACC→ACG)	emrB →	multidrug efflux system protein
RA	1,807,037	C→G	48.1%	T419T (ACC→ACG)	emrB →	multidrug efflux system protein
RA	1,807,046	C→T	48.0%	T422T (ACC→ACT)	emrB →	multidrug efflux system protein
RA	1,807,070	G→T	40.8%	A430A (GCG→GCT)	emrB →	multidrug efflux system protein
RA	1,807,079	T→C	35.1%	T433T (ACT→ACC)	emrB →	multidrug efflux system protein
RA	1,813,536	C→A	66.6%	A547A (GCG→GCT)	alaS ←	alanyl‑tRNA synthetase
RA	1,813,620	A→G	36.9%	F519F (TTT→TTC)	alaS ←	alanyl‑tRNA synthetase
RA	1,813,656	G→A	38.4%	G507G (GGC→GGT)	alaS ←	alanyl‑tRNA synthetase
RA	1,814,214	A→G	46.5%	G321G (GGT→GGC)	alaS ←	alanyl‑tRNA synthetase
RA	1,814,577	G→A	60.8%	S200S (AGC→AGT)	alaS ←	alanyl‑tRNA synthetase
RA	1,817,649	T→C	34.6%	intergenic (‑138/+7)	ygaD ← / ← mltB	conserved hypothetical protein/membrane‑bound lytic murein transglycosylase B
RA	1,817,656	C→T	38.7%	*362* (TAG→TAA)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	1,817,662	T→C	35.5%	V360V (GTA→GTG)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	1,817,665	T→G	34.7%	R359R (CGA→CGC)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	1,820,412	T→C	35.7%	L32L (CTA→CTG)	norR ←	DNA‑binding transcriptional activator
RA	1,820,972	A→G	14.0%	A93A (GCA→GCG)	norV →	flavorubredoxin oxidoreductase
RA	1,826,057	G→A	40.4%	C89C (TGC→TGT)	hydN ←	formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit
RA	1,826,895	C→G	63.4%	R46R (CGC→CGG)	mutS →	methyl‑directed mismatch repair protein
RA	1,827,216	G→T	67.8%	G153G (GGG→GGT)	mutS →	methyl‑directed mismatch repair protein
RA	1,827,240	T→G	55.2%	A161A (GCT→GCG)	mutS →	methyl‑directed mismatch repair protein
RA	1,827,435	C→T	51.7%	G226G (GGC→GGT)	mutS →	methyl‑directed mismatch repair protein
RA	1,827,438	C→G	54.5%	V227V (GTC→GTG)	mutS →	methyl‑directed mismatch repair protein
RA	1,827,447	G→A	58.8%	A230A (GCG→GCA)	mutS →	methyl‑directed mismatch repair protein
RA	1,827,450	G→A	58.0%	P231P (CCG→CCA)	mutS →	methyl‑directed mismatch repair protein
RA	1,829,861	G→A	35.8%	S146N (AGT→AAT) ‡	pphB →	serine/threonine‑specific protein phosphatase 2
RA	1,829,862	T→G	35.8%	S146R (AGT→AGG) ‡	pphB →	serine/threonine‑specific protein phosphatase 2
RA	1,829,865	A→G	22.6%	E147E (GAA→GAG)	pphB →	serine/threonine‑specific protein phosphatase 2
RA	1,829,870	T→A	17.2%	L149H (CTC→CAC) ‡	pphB →	serine/threonine‑specific protein phosphatase 2
RA	1,829,871	C→G	17.8%	L149L (CTC→CTG) ‡	pphB →	serine/threonine‑specific protein phosphatase 2
RA	1,829,877	T→C	22.5%	G151G (GGT→GGC)	pphB →	serine/threonine‑specific protein phosphatase 2
RA	1,830,537	T→A	49.0%	T131T (ACA→ACT)	ygbI ←	predicted DNA‑binding transcriptional regulator
RA	1,830,540	G→A	49.0%	V130V (GTC→GTT)	ygbI ←	predicted DNA‑binding transcriptional regulator
RA	1,830,546	A→T	57.8%	T128T (ACT→ACA)	ygbI ←	predicted DNA‑binding transcriptional regulator
RA	1,830,549	C→G	57.8%	L127L (CTG→CTC)	ygbI ←	predicted DNA‑binding transcriptional regulator
RA	1,830,554	A→G	50.0%	S126P (TCA→CCA)	ygbI ←	predicted DNA‑binding transcriptional regulator
RA	1,830,565	A→G	50.8%	I122T (ATT→ACT)	ygbI ←	predicted DNA‑binding transcriptional regulator
RA	1,830,579	T→A	50.9%	I117I (ATA→ATT)	ygbI ←	predicted DNA‑binding transcriptional regulator
RA	1,830,840	G→A	53.2%	V30V (GTC→GTT)	ygbI ←	predicted DNA‑binding transcriptional regulator
RA	1,830,994	A→G	34.0%	intergenic (‑65/‑101)	ygbI ← / → ygbJ	predicted DNA‑binding transcriptional regulator/predicted dehydrogenase, with NAD(P)‑binding Rossmann‑fold domain
RA	1,831,018	A→C	36.0%	intergenic (‑89/‑77)	ygbI ← / → ygbJ	predicted DNA‑binding transcriptional regulator/predicted dehydrogenase, with NAD(P)‑binding Rossmann‑fold domain
RA	1,831,027	C→T	44.5%	intergenic (‑98/‑68)	ygbI ← / → ygbJ	predicted DNA‑binding transcriptional regulator/predicted dehydrogenase, with NAD(P)‑binding Rossmann‑fold domain
RA	1,831,037	C→T	44.4%	intergenic (‑108/‑58)	ygbI ← / → ygbJ	predicted DNA‑binding transcriptional regulator/predicted dehydrogenase, with NAD(P)‑binding Rossmann‑fold domain
RA	1,831,039	A→C	44.5%	intergenic (‑110/‑56)	ygbI ← / → ygbJ	predicted DNA‑binding transcriptional regulator/predicted dehydrogenase, with NAD(P)‑binding Rossmann‑fold domain
RA	1,831,056	T→C	25.1%	intergenic (‑127/‑39)	ygbI ← / → ygbJ	predicted DNA‑binding transcriptional regulator/predicted dehydrogenase, with NAD(P)‑binding Rossmann‑fold domain
RA	1,833,604	G→A	46.8%	S116N (AGC→AAC) ‡	ygbL →	predicted class II aldolase
RA	1,833,605	C→T	39.4%	S116S (AGC→AGT) ‡	ygbL →	predicted class II aldolase
RA	1,833,617	T→G	39.1%	R120R (CGT→CGG)	ygbL →	predicted class II aldolase
RA	1,833,650	A→T	48.5%	G131G (GGA→GGT)	ygbL →	predicted class II aldolase
RA	1,833,668	T→C	39.1%	P137P (CCT→CCC)	ygbL →	predicted class II aldolase
RA	1,840,013	C→T	56.8%	E319E (GAG→GAA)	truD ←	pseudoruidine synthase
RA	1,840,037	A→G	62.4%	N311N (AAT→AAC)	truD ←	pseudoruidine synthase
RA	1,841,416	A→G	40.3%	H10H (CAT→CAC)	ispF ←	2C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase
RA	1,841,484	C→T	40.4%	E224E (GAG→GAA)	ispD ←	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol synthase
RA	1,841,493	T→C	42.6%	A221A (GCA→GCG)	ispD ←	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol synthase
RA	1,841,502	T→C	23.6%	E218E (GAA→GAG)	ispD ←	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol synthase
RA	1,841,514	G→T	23.0%	V214V (GTC→GTA)	ispD ←	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol synthase
RA	1,841,517	T→C	26.4%	K213K (AAA→AAG)	ispD ←	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol synthase
RA	1,841,520	A→G	24.8%	I212I (ATT→ATC)	ispD ←	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol synthase
RA	1,842,330	T→C	37.3%	Q52Q (CAA→CAG)	ftsB ←	cell division protein
RA	1,843,423	C→A	9.2%	D79Y (GAT→TAT)	cysC ←	adenosine 5'‑phosphosulfate kinase
RA	1,844,797	G→A	59.8%	D96D (GAC→GAT)	cysN ←	sulfate adenylyltransferase, subunit 1
RA	1,844,803	G→A	64.9%	T94T (ACC→ACT)	cysN ←	sulfate adenylyltransferase, subunit 1
RA	1,844,848	A→T	38.0%	A79A (GCT→GCA)	cysN ←	sulfate adenylyltransferase, subunit 1
RA	1,845,292	G→A	51.8%	P235S (CCG→TCG)	cysD ←	sulfate adenylyltransferase, subunit 2
RA	1,845,301	C→T	56.3%	D232N (GAC→AAC)	cysD ←	sulfate adenylyltransferase, subunit 2
RA	1,845,328	A→G	50.5%	L223L (TTG→CTG)	cysD ←	sulfate adenylyltransferase, subunit 2
RA	1,847,097	G→C	24.2%	G284G (GGG→GGC)	iap →	aminopeptidase in alkaline phosphatase isozyme conversion
RA	1,847,181	C→A	34.9%	H312Q (CAC→CAA)	iap →	aminopeptidase in alkaline phosphatase isozyme conversion
RA	1,847,184	A→G	38.1%	Q313Q (CAA→CAG)	iap →	aminopeptidase in alkaline phosphatase isozyme conversion
RA	1,857,716	C→G	29.1%	E27Q (GAA→CAA)	cysH ←	3'‑phosphoadenosine 5'‑phosphosulfate reductase
RA	1,858,220	A→G	14.1%	F454F (TTT→TTC)	cysI ←	sulfite reductase, beta subunit, NAD(P)‑binding
RA	1,858,283	A→G	38.6%	A433A (GCT→GCC)	cysI ←	sulfite reductase, beta subunit, NAD(P)‑binding
RA	1,858,289	C→T	48.6%	S431S (TCG→TCA)	cysI ←	sulfite reductase, beta subunit, NAD(P)‑binding
RA	1,858,373	T→C	23.7%	V403V (GTA→GTG)	cysI ←	sulfite reductase, beta subunit, NAD(P)‑binding
RA	1,858,376	A→T	24.7%	G402G (GGT→GGA)	cysI ←	sulfite reductase, beta subunit, NAD(P)‑binding
RA	1,859,000	G→A	56.9%	D194D (GAC→GAT)	cysI ←	sulfite reductase, beta subunit, NAD(P)‑binding
RA	1,862,621	T→G	53.9%	A161A (GCT→GCG)	ygcN →	predicted oxidoreductase, FAD/NAD(P)‑binding domain
RA	1,862,627	T→C	59.6%	R163R (CGT→CGC)	ygcN →	predicted oxidoreductase, FAD/NAD(P)‑binding domain
RA	1,863,770	A→G	27.2%	Q31Q (CAA→CAG)	ygcP →	predicted anti‑terminator regulatory protein
RA	1,864,367	G→C	38.3%	intergenic (+114/+34)	ygcP → / ← ygcQ	predicted anti‑terminator regulatory protein/predicted flavoprotein
RA	1,864,396	A→G	53.5%	intergenic (+143/+5)	ygcP → / ← ygcQ	predicted anti‑terminator regulatory protein/predicted flavoprotein
RA	1,866,972	T→G	55.9%	V127V (GTA→GTC)	ygcS ←	predicted transporter
RA	1,866,978	A→G	58.6%	Y125Y (TAT→TAC)	ygcS ←	predicted transporter
RA	1,867,002	A→G	52.2%	I117I (ATT→ATC)	ygcS ←	predicted transporter
RA	1,867,296	G→T	71.0%	R19R (CGC→CGA)	ygcS ←	predicted transporter
RA	1,867,299	G→A	71.1%	C18C (TGC→TGT)	ygcS ←	predicted transporter
RA	1,868,106	G→A	35.0%	D265D (GAC→GAT)	ygcU ←	predicted FAD containing dehydrogenase
RA	1,868,121	G→A	32.2%	I260I (ATC→ATT)	ygcU ←	predicted FAD containing dehydrogenase
RA	1,868,124	T→C	31.9%	S259S (TCA→TCG)	ygcU ←	predicted FAD containing dehydrogenase
RA	1,869,681	A→G	23.9%	G25G (GGT→GGC)	ygcW ←	predicted deoxygluconate dehydrogenase
RA	1,869,696	G→T	33.8%	T20T (ACC→ACA)	ygcW ←	predicted deoxygluconate dehydrogenase
RA	1,870,835	G→A	55.2%	S254S (TCG→TCA)	yqcE →	predicted transporter
RA	1,870,877	A→C	20.0%	I268I (ATA→ATC)	yqcE →	predicted transporter
RA	1,871,049	C→T	42.0%	L326L (CTG→TTG) ‡	yqcE →	predicted transporter
RA	1,871,051	G→A	42.0%	L326L (CTG→CTA) ‡	yqcE →	predicted transporter
RA	1,871,189	A→G	14.1%	P372P (CCA→CCG)	yqcE →	predicted transporter
RA	1,872,394	C→T	21.5%	S339S (AGC→AGT)	ygcE →	predicted kinase
RA	1,872,656	G→A	19.2%	A427T (GCA→ACA)	ygcE →	predicted kinase
RA	1,872,673	C→A	33.1%	N432K (AAC→AAA)	ygcE →	predicted kinase
RA	1,872,697	T→C	35.1%	F440F (TTT→TTC)	ygcE →	predicted kinase
RA	1,874,126	C→T	29.6%	intergenic (+1270/+103)	ygcE → / ← ygcF	predicted kinase/conserved hypothetical protein
RA	1,874,129	T→A	28.0%	intergenic (+1273/+100)	ygcE → / ← ygcF	predicted kinase/conserved hypothetical protein
RA	1,874,131	G→A	30.7%	intergenic (+1275/+98)	ygcE → / ← ygcF	predicted kinase/conserved hypothetical protein
RA	1,874,640	C→A	31.6%	R87R (CGG→CGT)	ygcF ←	conserved hypothetical protein
RA	1,874,658	G→A	36.2%	R81R (CGC→CGT)	ygcF ←	conserved hypothetical protein
RA	1,874,661	A→G	39.9%	G80G (GGT→GGC)	ygcF ←	conserved hypothetical protein
RA	1,876,236	A→G	62.2%	S396S (TCT→TCC)	eno ←	enolase
RA	1,876,242	A→C	62.2%	T394T (ACT→ACG)	eno ←	enolase
RA	1,876,341	A→G	66.4%	D361D (GAT→GAC)	eno ←	enolase
RA	1,876,356	G→A	31.5%	I356I (ATC→ATT)	eno ←	enolase
RA	1,876,359	T→A	31.6%	A355A (GCA→GCT)	eno ←	enolase
RA	1,876,368	A→G	27.0%	T352T (ACT→ACC)	eno ←	enolase
RA	1,876,422	A→G	41.1%	G334G (GGT→GGC)	eno ←	enolase
RA	1,876,560	A→G	44.0%	S288S (TCT→TCC)	eno ←	enolase
RA	1,879,631	T→C	37.6%	E179E (GAA→GAG)	mazG ←	nucleoside triphosphate pyrophosphohydrolase
RA	1,879,862	A→G	42.5%	D102D (GAT→GAC)	mazG ←	nucleoside triphosphate pyrophosphohydrolase
RA	1,881,919	C→T	45.5%	R405R (CGG→CGA)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,378	A→T	17.7%	R252R (CGT→CGA)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,393	C→A	19.3%	A247A (GCG→GCT)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,402	G→A	30.7%	G244G (GGC→GGT)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,471	C→G	41.4%	R221R (CGG→CGC)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,489	G→T	53.5%	A215A (GCC→GCA)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,492	A→G	52.4%	I214I (ATT→ATC)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,495	T→G	52.2%	R213R (CGA→CGC)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,510	T→C	39.6%	P208P (CCA→CCG)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,513	A→G	39.1%	H207H (CAT→CAC)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,516	G→C	39.2%	L206L (CTC→CTG)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,519	G→A	38.7%	Y205Y (TAC→TAT)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,543	T→C	35.8%	E197E (GAA→GAG)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,657	A→G	52.2%	H159H (CAT→CAC)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,882,687	T→C	31.6%	V149V (GTA→GTG)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase
RA	1,883,630	G→C	41.1%	Q285E (CAA→GAA)	rumA ←	23S rRNA (uracil‑5)‑methyltransferase
RA	1,883,667	T→C	35.8%	Q272Q (CAA→CAG)	rumA ←	23S rRNA (uracil‑5)‑methyltransferase
RA	1,884,080	G→A	11.9%	L135L (CTG→TTG)	rumA ←	23S rRNA (uracil‑5)‑methyltransferase
RA	1,884,138	A→T	35.8%	D115E (GAT→GAA)	rumA ←	23S rRNA (uracil‑5)‑methyltransferase
RA	1,885,303	G→A	54.0%	Q255Q (CAG→CAA)	barA →	hybrid sensory histidine kinase, in two‑component regulatory system with UvrY
RA	1,886,458	A→G	33.3%	T640T (ACA→ACG)	barA →	hybrid sensory histidine kinase, in two‑component regulatory system with UvrY
RA	1,886,479	G→A	42.8%	T647T (ACG→ACA)	barA →	hybrid sensory histidine kinase, in two‑component regulatory system with UvrY
RA	1,886,680	G→A	16.9%	L714L (TTG→TTA)	barA →	hybrid sensory histidine kinase, in two‑component regulatory system with UvrY
RA	1,887,935	C→A	37.1%	L311L (CTG→CTT)	gudD ←	(D)‑glucarate dehydratase 1
RA	1,888,190	G→A	62.0%	R226R (CGC→CGT)	gudD ←	(D)‑glucarate dehydratase 1
RA	1,888,954	A→G	30.5%	G425G (GGT→GGC)	gudX ←	predicted glucarate dehydratase
RA	1,889,568	C→T	45.4%	A221T (GCA→ACA)	gudX ←	predicted glucarate dehydratase
RA	1,889,608	G→A	57.3%	G207G (GGC→GGT)	gudX ←	predicted glucarate dehydratase
RA	1,889,980	G→A	24.4%	V83V (GTC→GTT)	gudX ←	predicted glucarate dehydratase
RA	1,891,013	C→G	48.8%	G190G (GGG→GGC)	gudP ←	predicted D‑glucarate transporter
RA	1,891,538	T→C	40.8%	T15T (ACA→ACG)	gudP ←	predicted D‑glucarate transporter
RA	1,891,664	Δ1 bp	100%	intergenic (‑82/+409)	gudP ← / ← ygdL	predicted D‑glucarate transporter/conserved hypothetical protein
RA	1,892,019:1	+GC	100%	intergenic (‑437/+54)	gudP ← / ← ygdL	predicted D‑glucarate transporter/conserved hypothetical protein
RA	1,892,351	G→A	100%	L177L (CTG→TTG)	ygdL ←	conserved hypothetical protein
RA	1,892,400	A→G	100%	D160D (GAT→GAC)	ygdL ←	conserved hypothetical protein
RA	1,892,496	G→A	29.5%	A128A (GCC→GCT)	ygdL ←	conserved hypothetical protein
RA	1,893,820	G→A	18.7%	R132R (CGC→CGT)	mltA ←	membrane‑bound lytic murein transglycosylase A
RA	1,893,856	A→G	32.3%	G120G (GGT→GGC)	mltA ←	membrane‑bound lytic murein transglycosylase A
RA	1,893,859	G→T	31.4%	T119T (ACC→ACA)	mltA ←	membrane‑bound lytic murein transglycosylase A
RA	1,896,246	C→A	40.9%	intergenic (‑199/‑33)	amiC ← / → argA	N‑acetylmuramoyl‑L‑alanine amidase/fused acetylglutamate kinase homolog (inactive) and amino acid N‑acetyltransferase
RA	1,896,276	G→A	54.0%	intergenic (‑229/‑3)	amiC ← / → argA	N‑acetylmuramoyl‑L‑alanine amidase/fused acetylglutamate kinase homolog (inactive) and amino acid N‑acetyltransferase
RA	1,896,815	A→G	38.5%	S179S (TCA→TCG)	argA →	fused acetylglutamate kinase homolog (inactive) and amino acid N‑acetyltransferase
RA	1,897,196	T→C	30.9%	I306I (ATT→ATC)	argA →	fused acetylglutamate kinase homolog (inactive) and amino acid N‑acetyltransferase
RA	1,897,223	A→G	29.4%	P315P (CCA→CCG)	argA →	fused acetylglutamate kinase homolog (inactive) and amino acid N‑acetyltransferase
RA	1,898,833	C→T	60.7%	Q222Q (CAG→CAA)	recD ←	exonuclease V (RecBCD complex), alpha chain
RA	1,900,206	A→G	59.3%	F945F (TTT→TTC)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,900,215	T→C	58.2%	P942P (CCA→CCG)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,901,157	G→A	35.8%	I628I (ATC→ATT)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,901,169	G→A	56.4%	N624N (AAC→AAT)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,901,202	A→G	48.4%	R613R (CGT→CGC)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,901,226	C→T	24.4%	T605T (ACG→ACA)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,902,495	G→C	34.1%	V182V (GTC→GTG)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,902,504	T→A	30.4%	I179I (ATA→ATT)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,902,939	C→T	41.8%	A34A (GCG→GCA)	recB ←	exonuclease V (RecBCD complex), beta subunit
RA	1,903,767	C→G	43.8%	D719H (GAT→CAT)	ptr ←	protease III
RA	1,903,827	G→T	57.3%	R699R (CGA→AGA)	ptr ←	protease III
RA	1,903,969	A→G	37.3%	G651G (GGT→GGC)	ptr ←	protease III
RA	1,904,593	C→T	27.7%	K443K (AAG→AAA)	ptr ←	protease III
RA	1,904,641	C→T	50.0%	T427T (ACG→ACA)	ptr ←	protease III
RA	1,904,674	T→A	50.2%	A416A (GCA→GCT)	ptr ←	protease III
RA	1,904,710	C→T	40.6%	S404S (TCG→TCA)	ptr ←	protease III
RA	1,904,833	A→C	25.2%	A363A (GCT→GCG)	ptr ←	protease III
RA	1,904,839	G→A	26.3%	G361G (GGC→GGT)	ptr ←	protease III
RA	1,905,025	G→A	17.2%	N299N (AAC→AAT)	ptr ←	protease III
RA	1,905,908	G→A	40.8%	T5I (ACC→ATC)	ptr ←	protease III
RA	1,906,192	T→G	36.4%	R1092R (AGG→CGG)	recC ←	exonuclease V (RecBCD complex), gamma chain
RA	1,906,806	G→A	43.6%	A887V (GCA→GTA)	recC ←	exonuclease V (RecBCD complex), gamma chain
RA	1,906,811	C→T	44.4%	L885L (TTG→TTA)	recC ←	exonuclease V (RecBCD complex), gamma chain
RA	1,906,823	A→G	38.0%	N881N (AAT→AAC)	recC ←	exonuclease V (RecBCD complex), gamma chain
RA	1,908,113	C→A	46.4%	L451L (CTG→CTT)	recC ←	exonuclease V (RecBCD complex), gamma chain
RA	1,908,119	C→A	41.9%	P449P (CCG→CCT)	recC ←	exonuclease V (RecBCD complex), gamma chain
RA	1,910,142	C→T	58.9%	V18I (GTT→ATT)	ygdB ←	hypothetical protein
RA	1,910,924	T→C	42.5%	P97P (CCA→CCG)	ppdA ←	conserved hypothetical protein
RA	1,911,643	A→G	57.4%	L184L (TTG→CTG)	thyA ←	thymidylate synthetase
RA	1,914,053	G→A	28.0%	F473F (TTC→TTT)	ptsP ←	fused PEP‑protein phosphotransferase (enzyme I) of PTS system
RA	1,914,338	C→T	51.8%	V378V (GTG→GTA)	ptsP ←	fused PEP‑protein phosphotransferase (enzyme I) of PTS system
RA	1,914,374	G→T	73.1%	I366I (ATC→ATA)	ptsP ←	fused PEP‑protein phosphotransferase (enzyme I) of PTS system
RA	1,914,611	A→G	34.4%	S287S (AGT→AGC)	ptsP ←	fused PEP‑protein phosphotransferase (enzyme I) of PTS system
RA	1,916,684	T→C	34.8%	intergenic (‑670/‑15)	nudH ← / → mutH	nucleotide hydrolase/methyl‑directed mismatch repair protein
RA	1,920,405	G→A	28.1%	V165V (GTC→GTT)	ygeD ←	predicted inner membrane protein
RA	1,920,408	G→C	28.0%	L164L (CTC→CTG)	ygeD ←	predicted inner membrane protein
RA	1,920,411	G→A	27.3%	V163V (GTC→GTT) ‡	ygeD ←	predicted inner membrane protein
RA	1,920,413	C→T	26.5%	V163I (GTC→ATC) ‡	ygeD ←	predicted inner membrane protein
RA	1,920,429	C→A	35.3%	V157V (GTG→GTT)	ygeD ←	predicted inner membrane protein
RA	1,920,438	G→A	31.4%	A154A (GCC→GCT)	ygeD ←	predicted inner membrane protein
RA	1,922,014	T→C	47.5%	V346V (GTA→GTG)	aas ←	fused 2‑acylglycerophospho‑ethanolamine acyl transferase and acyl‑acyl carrier protein synthetase
RA	1,923,899	C→T	48.2%	T88T (ACC→ACT)	galR →	DNA‑binding transcriptional repressor
RA	1,924,613	T→C	24.9%	R326R (CGT→CGC)	galR →	DNA‑binding transcriptional repressor
RA	1,924,968	A→C	35.2%	D323E (GAT→GAG)	lysA ←	diaminopimelate decarboxylase, PLP‑binding
RA	1,926,217	G→A	62.8%	V54I (GTA→ATA)	lysR →	DNA‑binding transcriptional dual regulator
RA	1,926,225	G→A	65.6%	G56G (GGG→GGA)	lysR →	DNA‑binding transcriptional dual regulator
RA	1,927,349	G→A	60.8%	T108T (ACC→ACT)	ygeA ←	predicted racemase
RA	1,927,361	A→T	54.0%	I104I (ATT→ATA)	ygeA ←	predicted racemase
RA	1,927,381	T→A	47.4%	T98S (ACT→TCT)	ygeA ←	predicted racemase
RA	1,927,388	T→A	41.9%	S95S (TCA→TCT)	ygeA ←	predicted racemase
RA	1,929,007	A→G	45.6%	G71G (GGT→GGC)	araE ←	arabinose transporter
RA	1,930,883	G→A	27.6%	G93G (GGC→GGT)	kduI ←	predicted 5‑keto 4‑deoxyuronate isomerase
RA	1,932,006	C→T	30.7%	G208G (GGG→GGA)	yqeF ←	predicted acyltransferase
RA	1,932,021	C→T	37.2%	M203I (ATG→ATA)	yqeF ←	predicted acyltransferase
RA	1,932,207	G→A	31.1%	D141D (GAC→GAT)	yqeF ←	predicted acyltransferase
RA	1,932,405	C→A	27.5%	L75L (CTG→CTT)	yqeF ←	predicted acyltransferase
RA	1,933,099	G→A	58.9%	D448D (GAC→GAT)	lysS ←	lysine tRNA synthetase, constitutive
RA	1,933,915	G→A	60.0%	S176S (TCC→TCT)	lysS ←	lysine tRNA synthetase, constitutive
RA	1,933,927	G→C	39.2%	L172L (CTC→CTG)	lysS ←	lysine tRNA synthetase, constitutive
RA	1,934,611	G→A	41.5%	N288N (AAC→AAT)	prfB ←	peptide chain release factor RF‑2
RA	1,934,614	A→G	55.7%	D287D (GAT→GAC)	prfB ←	peptide chain release factor RF‑2
RA	1,936,148	A→G	26.6%	R409R (CGT→CGC)	recJ ←	ssDNA exonuclease, 5' ‑‑> 3'‑specific
RA	1,936,247	G→A	58.7%	R376R (CGC→CGT)	recJ ←	ssDNA exonuclease, 5' ‑‑> 3'‑specific
RA	1,937,926	G→A	38.3%	G55G (GGC→GGT)	dsbC ←	protein disulfide isomerase II
RA	1,938,229	T→C	32.7%	L261L (TTA→TTG)	xerD ←	site‑specific tyrosine recombinase
RA	1,938,253	A→G	44.1%	H253H (CAT→CAC)	xerD ←	site‑specific tyrosine recombinase
RA	1,939,711	A→T	30.5%	I127I (ATT→ATA)	ygfX ←	hypothetical protein
RA	1,939,735	A→G	31.6%	A119A (GCT→GCC)	ygfX ←	hypothetical protein
RA	1,939,987	T→C	100%	P35P (CCA→CCG)	ygfX ←	hypothetical protein
RA	1,940,706	G→A	27.8%	Q42Q (CAG→CAA)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,940,709	T→C	27.8%	G43G (GGT→GGC)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,940,737	G→A	33.7%	A53T (GCA→ACA) ‡	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,940,739	A→T	34.3%	A53A (GCA→GCT) ‡	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,941,264	T→C	54.7%	C228C (TGT→TGC)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,941,417	A→G	62.4%	V279V (GTA→GTG)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,941,424	G→A	58.2%	A282T (GCG→ACG)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,941,429	A→C	45.0%	V283V (GTA→GTC)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,941,450	C→T	47.7%	V290V (GTC→GTT)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,941,456	A→G	38.0%	V292V (GTA→GTG)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,941,462	C→T	13.6%	V294V (GTC→GTT)	ygfZ →	predicted folate‑dependent regulatory protein
RA	1,942,643	T→C	14.4%	K83K (AAA→AAG)	yqfB ←	conserved hypothetical protein
RA	1,943,994	A→G	45.5%	P355P (CCA→CCG)	bglA →	6‑phospho‑beta‑glucosidase A
RA	1,943,997	A→T	45.5%	V356V (GTA→GTT)	bglA →	6‑phospho‑beta‑glucosidase A
RA	1,944,009	T→C	32.4%	Y360Y (TAT→TAC)	bglA →	6‑phospho‑beta‑glucosidase A
RA	1,945,691	G→A	57.8%	D873D (GAC→GAT)	gcvP ←	glycine decarboxylase, PLP‑dependent, subunit (protein P) of glycine cleavage complex
RA	1,948,611	G→A	31.5%	D69D (GAC→GAT)	gcvH ←	glycine cleavage complex lipoylprotein
RA	1,948,808	C→T	61.7%	V4I (GTA→ATA)	gcvH ←	glycine cleavage complex lipoylprotein
RA	1,950,925	G→A	56.9%	H221Y (CAT→TAT)	visC ←	predicted oxidoreductase, FAD/NAD(P)‑binding domain
RA	1,951,476	T→G	54.1%	Q37P (CAG→CCG)	visC ←	predicted oxidoreductase, FAD/NAD(P)‑binding domain
RA	1,951,514	C→A	74.0%	G24G (GGG→GGT)	visC ←	predicted oxidoreductase, FAD/NAD(P)‑binding domain
RA	1,951,544	C→G	75.0%	V14V (GTG→GTC)	visC ←	predicted oxidoreductase, FAD/NAD(P)‑binding domain
RA	1,953,017	C→A	69.7%	V364V (GTG→GTT)	pepP ←	proline aminopeptidase P II
RA	1,953,026	G→A	71.0%	V361V (GTC→GTT)	pepP ←	proline aminopeptidase P II
RA	1,953,119	G→A	36.2%	G330G (GGC→GGT)	pepP ←	proline aminopeptidase P II
RA	1,953,382	G→A	46.9%	L243L (CTG→TTG)	pepP ←	proline aminopeptidase P II
RA	1,953,425	C→A	47.5%	P228P (CCG→CCT)	pepP ←	proline aminopeptidase P II
RA	1,953,428	A→G	47.5%	Y227Y (TAT→TAC)	pepP ←	proline aminopeptidase P II
RA	1,956,137	C→T	42.4%	intergenic (+80/+309)	ygfA → / ← serA	predicted ligase/D‑3‑phosphoglycerate dehydrogenase
RA	1,956,148	A→T	47.4%	intergenic (+91/+298)	ygfA → / ← serA	predicted ligase/D‑3‑phosphoglycerate dehydrogenase
RA	1,956,167	G→T	38.3%	intergenic (+110/+279)	ygfA → / ← serA	predicted ligase/D‑3‑phosphoglycerate dehydrogenase
RA	1,956,168	C→G	37.5%	intergenic (+111/+278)	ygfA → / ← serA	predicted ligase/D‑3‑phosphoglycerate dehydrogenase
RA	1,956,169	T→G	38.4%	intergenic (+112/+277)	ygfA → / ← serA	predicted ligase/D‑3‑phosphoglycerate dehydrogenase
RA	1,956,370	C→T	39.0%	intergenic (+313/+76)	ygfA → / ← serA	predicted ligase/D‑3‑phosphoglycerate dehydrogenase
RA	1,959,153	C→T	57.5%	A306A (GCG→GCA) ‡	fbaA ←	fructose‑bisphosphate aldolase, class II
RA	1,959,154	G→T	57.5%	A306E (GCG→GAG) ‡	fbaA ←	fructose‑bisphosphate aldolase, class II
RA	1,959,174	G→A	100%	G299G (GGC→GGT)	fbaA ←	fructose‑bisphosphate aldolase, class II
RA	1,959,701	A→G	58.3%	L124L (TTG→CTG)	fbaA ←	fructose‑bisphosphate aldolase, class II
RA	1,960,780	C→T	76.1%	A223A (GCG→GCA)	pgk ←	phosphoglycerate kinase
RA	1,960,798	G→A	70.5%	I217I (ATC→ATT)	pgk ←	phosphoglycerate kinase
RA	1,960,813	A→G	36.3%	I212I (ATT→ATC)	pgk ←	phosphoglycerate kinase
RA	1,963,098	A→G	31.3%	L140L (TTG→CTG)	yggC ←	conserved hypothetical protein with nucleoside triphosphate hydrolase domain
RA	1,963,872	C→G	49.1%	V50V (GTG→GTC)	yggD ←	predicted DNA‑binding transcriptional regulator
RA	1,966,797	T→C	40.9%	V611V (GTA→GTG)	tktA ←	transketolase 1, thiamin‑binding
RA	1,966,800	A→C	41.0%	A610A (GCT→GCG)	tktA ←	transketolase 1, thiamin‑binding
RA	1,966,806	G→A	42.0%	R608R (CGC→CGT)	tktA ←	transketolase 1, thiamin‑binding
RA	1,966,809	T→A	37.2%	A607A (GCA→GCT)	tktA ←	transketolase 1, thiamin‑binding
RA	1,966,812	A→G	38.4%	T606T (ACT→ACC)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,112	A→G	48.1%	G506G (GGT→GGC)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,127	G→T	78.1%	V501V (GTC→GTA)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,130	C→T	81.0%	A500A (GCG→GCA)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,301	G→A	20.8%	N443N (AAC→AAT)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,334	G→T	27.2%	S432S (TCC→TCA)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,340	G→A	44.2%	Y430Y (TAC→TAT)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,352	G→A	42.9%	G426G (GGC→GGT)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,397	C→T	61.2%	E411E (GAG→GAA)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,400	G→A	51.9%	R410R (CGC→CGT)	tktA ←	transketolase 1, thiamin‑binding
RA	1,967,403	A→T	51.9%	V409V (GTT→GTA)	tktA ←	transketolase 1, thiamin‑binding
RA	1,968,090	T→C	28.3%	A180A (GCA→GCG)	tktA ←	transketolase 1, thiamin‑binding
RA	1,968,732	G→T	54.6%	intergenic (‑103/‑175)	tktA ← / → yggG	transketolase 1, thiamin‑binding/predicted peptidase
RA	1,969,046	C→A	52.4%	T47N (ACC→AAC) ‡	yggG →	predicted peptidase
RA	1,969,047	C→A	52.4%	T47T (ACC→ACA) ‡	yggG →	predicted peptidase
RA	1,969,065	T→C	45.2%	C53C (TGT→TGC)	yggG →	predicted peptidase
RA	1,969,083	G→A	36.1%	K59K (AAG→AAA)	yggG →	predicted peptidase
RA	1,969,173	A→G	19.7%	V89V (GTA→GTG)	yggG →	predicted peptidase
RA	1,970,324	C→A	40.3%	A156A (GCG→GCT)	speB ←	agmatinase
RA	1,970,327	A→G	40.3%	Y155Y (TAT→TAC)	speB ←	agmatinase
RA	1,970,345	G→A	34.6%	D149D (GAC→GAT)	speB ←	agmatinase
RA	1,970,359	G→A	51.0%	L145L (CTG→TTG)	speB ←	agmatinase
RA	1,971,130	G→A	42.8%	D592D (GAC→GAT)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,971,412	T→C	70.6%	A498A (GCA→GCG)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,971,415	G→A	74.3%	D497D (GAC→GAT)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,971,856	G→A	20.7%	N350N (AAC→AAT)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,971,874	G→A	47.2%	G344G (GGC→GGT)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,971,889	A→G	73.7%	I339I (ATT→ATC)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,971,922	C→T	52.2%	V328V (GTG→GTA)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,971,934	G→A	41.2%	S324S (TCC→TCT)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,971,940	C→A	39.5%	S322S (TCG→TCT)	speA ←	biosynthetic arginine decarboxylase, PLP‑binding
RA	1,973,145	A→G	26.4%	intergenic (‑85/‑36)	yqgB ← / → yqgC	hypothetical protein/hypothetical protein
RA	1,973,768	T→C	28.6%	I23I (ATT→ATC)	metK →	methionine adenosyltransferase 1
RA	1,973,851	T→C	44.8%	V51A (GTT→GCT)	metK →	methionine adenosyltransferase 1
RA	1,974,119	C→T	64.0%	T140T (ACC→ACT)	metK →	methionine adenosyltransferase 1
RA	1,974,440	T→C	44.3%	I247I (ATT→ATC)	metK →	methionine adenosyltransferase 1
RA	1,974,473	C→T	46.1%	H258H (CAC→CAT)	metK →	methionine adenosyltransferase 1
RA	1,974,485	A→G	30.2%	A262A (GCA→GCG)	metK →	methionine adenosyltransferase 1
RA	1,974,491	T→C	29.2%	S264S (TCT→TCC)	metK →	methionine adenosyltransferase 1
RA	1,974,967	G→C	45.1%	intergenic (+113/‑311)	metK → / → galP	methionine adenosyltransferase 1/D‑galactose transporter
RA	1,974,969	T→A	46.4%	intergenic (+115/‑309)	metK → / → galP	methionine adenosyltransferase 1/D‑galactose transporter
RA	1,974,977	C→T	40.5%	intergenic (+123/‑301)	metK → / → galP	methionine adenosyltransferase 1/D‑galactose transporter
RA	1,974,984	G→A	44.0%	intergenic (+130/‑294)	metK → / → galP	methionine adenosyltransferase 1/D‑galactose transporter
RA	1,974,996	A→T	47.3%	intergenic (+142/‑282)	metK → / → galP	methionine adenosyltransferase 1/D‑galactose transporter
RA	1,976,012	C→T	34.8%	N245N (AAC→AAT)	galP →	D‑galactose transporter
RA	1,976,135	T→C	59.7%	T286T (ACT→ACC)	galP →	D‑galactose transporter
RA	1,976,156	C→A	63.9%	T293T (ACC→ACA)	galP →	D‑galactose transporter
RA	1,976,678	C→T	28.0%	intergenic (+6/‑71)	galP → / → sprT	D‑galactose transporter/conserved hypothetical protein
RA	1,976,681	A→G	27.3%	intergenic (+9/‑68)	galP → / → sprT	D‑galactose transporter/conserved hypothetical protein
RA	1,976,695	G→A	36.3%	intergenic (+23/‑54)	galP → / → sprT	D‑galactose transporter/conserved hypothetical protein
RA	1,976,696	C→T	36.3%	intergenic (+24/‑53)	galP → / → sprT	D‑galactose transporter/conserved hypothetical protein
RA	1,977,299	G→A	53.2%	intergenic (+53/‑42)	sprT → / → endA	conserved hypothetical protein/DNA‑specific endonuclease I
RA	1,977,610	G→A	53.8%	Q90Q (CAG→CAA)	endA →	DNA‑specific endonuclease I
RA	1,977,655	C→T	41.9%	N105N (AAC→AAT)	endA →	DNA‑specific endonuclease I
RA	1,977,661	T→C	37.3%	A107A (GCT→GCC)	endA →	DNA‑specific endonuclease I
RA	1,980,200	C→T	55.3%	P90P (CCC→CCT)	yqgE →	hypothetical protein
RA	1,980,799	A→G	51.4%	E102E (GAA→GAG)	yqgF →	predicted Holliday junction resolvase
RA	1,980,802	C→A	50.6%	A103A (GCC→GCA)	yqgF →	predicted Holliday junction resolvase
RA	1,981,406	T→C	24.9%	A223A (GCA→GCG)	yggR ←	predicted transporter
RA	1,981,463	G→A	33.2%	D204D (GAC→GAT)	yggR ←	predicted transporter
RA	1,981,950	G→A	39.9%	P42L (CCG→CTG)	yggR ←	predicted transporter
RA	1,981,954	T→C	40.0%	T41A (ACG→GCG)	yggR ←	predicted transporter
RA	1,982,466	T→A	43.9%	V125V (GTT→GTA)	yggS →	hypothetical protein
RA	1,984,551	T→G	100%	T97T (ACT→ACG)	yggW →	predicted oxidoreductase
RA	1,984,563	C→T	68.5%	N101N (AAC→AAT)	yggW →	predicted oxidoreductase
RA	1,984,569	C→T	68.5%	G103G (GGC→GGT)	yggW →	predicted oxidoreductase
RA	1,984,575	A→T	59.1%	V105V (GTA→GTT)	yggW →	predicted oxidoreductase
RA	1,985,612	T→C	28.6%	Q316Q (CAA→CAG)	yggM ←	conserved hypothetical protein
RA	1,986,041	C→T	66.7%	V173V (GTG→GTA)	yggM ←	conserved hypothetical protein
RA	1,986,044	T→A	66.7%	E172D (GAA→GAT)	yggM ←	conserved hypothetical protein
RA	1,986,052	C→T	62.5%	E170K (GAA→AAA)	yggM ←	conserved hypothetical protein
RA	1,987,051	T→C	30.9%	P224P (CCA→CCG)	ansB ←	periplasmic L‑asparaginase II
RA	1,987,066	A→G	38.0%	H219H (CAT→CAC)	ansB ←	periplasmic L‑asparaginase II
RA	1,987,087	C→T	39.0%	Q212Q (CAG→CAA)	ansB ←	periplasmic L‑asparaginase II
RA	1,987,156	G→A	30.8%	D189D (GAC→GAT)	ansB ←	periplasmic L‑asparaginase II
RA	1,987,180	G→A	40.5%	D181D (GAC→GAT)	ansB ←	periplasmic L‑asparaginase II
RA	1,987,528	T→C	26.0%	K65K (AAA→AAG)	ansB ←	periplasmic L‑asparaginase II
RA	1,987,531	T→C	26.0%	L64L (CTA→CTG)	ansB ←	periplasmic L‑asparaginase II
RA	1,988,027	C→G	65.7%	G197G (GGG→GGC)	yggN ←	hypothetical protein
RA	1,988,030	C→G	65.7%	G196G (GGG→GGC)	yggN ←	hypothetical protein
RA	1,988,048	A→G	100%	N190N (AAT→AAC)	yggN ←	hypothetical protein
RA	1,990,804	C→T	60.0%	D266D (GAC→GAT)	mutY →	adenine DNA glycosylase
RA	1,990,864	A→G	69.9%	Q286Q (CAA→CAG)	mutY →	adenine DNA glycosylase
RA	1,992,977	G→T	36.9%	T90T (ACG→ACT)	nupG →	nucleoside transporter
RA	1,992,980	A→G	36.9%	T91T (ACA→ACG)	nupG →	nucleoside transporter
RA	1,992,986	A→G	33.3%	E93E (GAA→GAG)	nupG →	nucleoside transporter
RA	1,993,595	G→T	31.3%	A296A (GCG→GCT)	nupG →	nucleoside transporter
RA	1,993,811	T→G	30.0%	V368V (GTT→GTG)	nupG →	nucleoside transporter
RA	1,993,837	T→C	46.9%	I377T (ATT→ACT)	nupG →	nucleoside transporter
RA	1,993,886	T→G	27.3%	V393V (GTT→GTG)	nupG →	nucleoside transporter
RA	1,994,046	C→T	67.9%	V702M (GTG→ATG)	speC ←	ornithine decarboxylase, constitutive
RA	1,995,805	G→A	51.9%	N115N (AAC→AAT)	speC ←	ornithine decarboxylase, constitutive
RA	1,995,808	G→A	53.5%	G114G (GGC→GGT)	speC ←	ornithine decarboxylase, constitutive
RA	1,996,903	G→A	23.1%	G119G (GGG→GGA)	yqgA →	predicted inner membrane protein
RA	1,997,980	C→T	43.8%	V384V (GTG→GTA)	pitB ←	phosphate transporter
RA	1,998,490	C→G	39.5%	L214L (CTG→CTC)	pitB ←	phosphate transporter
RA	1,998,493	C→G	44.7%	A213A (GCG→GCC)	pitB ←	phosphate transporter
RA	2,000,404	G→A	43.6%	I293I (ATC→ATT)	gss ←	fused glutathionylspermidine amidase and glutathionylspermidine synthetase
RA	2,000,410	G→A	36.3%	F291F (TTC→TTT)	gss ←	fused glutathionylspermidine amidase and glutathionylspermidine synthetase
RA	2,000,536	A→C	48.0%	P249P (CCT→CCG)	gss ←	fused glutathionylspermidine amidase and glutathionylspermidine synthetase
RA	2,000,557	A→G	15.9%	G242G (GGT→GGC)	gss ←	fused glutathionylspermidine amidase and glutathionylspermidine synthetase
RA	2,001,010	T→A	16.2%	R91R (CGA→CGT)	gss ←	fused glutathionylspermidine amidase and glutathionylspermidine synthetase
RA	2,001,040	C→T	25.8%	A81A (GCG→GCA)	gss ←	fused glutathionylspermidine amidase and glutathionylspermidine synthetase
RA	2,001,058	A→G	44.4%	F75F (TTT→TTC)	gss ←	fused glutathionylspermidine amidase and glutathionylspermidine synthetase
RA	2,002,536	A→G	43.9%	D63D (GAT→GAC)	hybG ←	hydrogenase 2 accessory protein
RA	2,002,542	G→A	40.9%	D61D (GAC→GAT)	hybG ←	hydrogenase 2 accessory protein
RA	2,002,548	G→A	39.9%	I59I (ATC→ATT)	hybG ←	hydrogenase 2 accessory protein
RA	2,002,578	C→T	24.2%	V49V (GTG→GTA)	hybG ←	hydrogenase 2 accessory protein
RA	2,002,764	C→T	27.0%	L105L (CTG→CTA)	hybF ←	protein involved with the maturation of hydrogenases 1 and 2
RA	2,003,978	G→A	34.1%	V23V (GTC→GTT)	hybD ←	predicted maturation element for hydrogenase 2
RA	2,004,772	G→T	36.4%	G326G (GGC→GGA)	hybC ←	hydrogenase 2, large subunit
RA	2,004,952	G→A	26.3%	A266A (GCC→GCT)	hybC ←	hydrogenase 2, large subunit
RA	2,004,955	A→G	26.0%	I265I (ATT→ATC)	hybC ←	hydrogenase 2, large subunit
RA	2,004,964	G→A	26.7%	T262T (ACC→ACT)	hybC ←	hydrogenase 2, large subunit
RA	2,005,051	G→A	64.4%	G233G (GGC→GGT)	hybC ←	hydrogenase 2, large subunit
RA	2,005,056	A→G	69.2%	L232L (TTG→CTG)	hybC ←	hydrogenase 2, large subunit
RA	2,005,368	T→C	23.9%	T128A (ACC→GCC)	hybC ←	hydrogenase 2, large subunit
RA	2,005,372	G→A	27.4%	D126D (GAC→GAT)	hybC ←	hydrogenase 2, large subunit
RA	2,006,358	C→T	57.7%	G189G (GGG→GGA)	hybB ←	predicted hydrogenase 2 cytochrome b type component
RA	2,006,379	G→A	39.4%	T182T (ACC→ACT)	hybB ←	predicted hydrogenase 2 cytochrome b type component
RA	2,006,382	C→T	35.5%	P181P (CCG→CCA)	hybB ←	predicted hydrogenase 2 cytochrome b type component
RA	2,007,034	A→G	31.5%	I289I (ATT→ATC) ‡	hybA ←	hydrogenase 2 4Fe‑4S ferredoxin‑type component
RA	2,007,036	T→C	31.5%	I289V (ATT→GTT) ‡	hybA ←	hydrogenase 2 4Fe‑4S ferredoxin‑type component
RA	2,007,039	T→G	29.7%	N288H (AAT→CAT)	hybA ←	hydrogenase 2 4Fe‑4S ferredoxin‑type component
RA	2,008,176	A→G	46.8%	G282G (GGT→GGC)	hybO ←	hydrogenase 2, small subunit
RA	2,008,326	G→A	100%	C232C (TGC→TGT)	hybO ←	hydrogenase 2, small subunit
RA	2,008,479	T→C	51.8%	P181P (CCA→CCG)	hybO ←	hydrogenase 2, small subunit
RA	2,008,482	C→T	51.8%	L180L (CTG→CTA)	hybO ←	hydrogenase 2, small subunit
RA	2,009,730	G→T	61.2%	pseudogene (297/411 nt)	yghX ←	ECK2993:JW5926:b2999; predicted hydrolase
RA	2,009,916	A→T	43.5%	pseudogene (111/411 nt)	yghX ←	ECK2993:JW5926:b2999; predicted hydrolase
RA	2,009,919	C→T	50.0%	pseudogene (108/411 nt)	yghX ←	ECK2993:JW5926:b2999; predicted hydrolase
RA	2,010,544	A→G	13.6%	intergenic (‑165/‑113)	yghY ← / → yghZ	ECK2994:JW5496:b3000; predicted dienlactone hydrolase/aldo‑keto reductase
RA	2,010,698	A→G	50.0%	Q14Q (CAA→CAG)	yghZ →	aldo‑keto reductase
RA	2,011,421	A→G	35.4%	T255T (ACA→ACG)	yghZ →	aldo‑keto reductase
RA	2,011,433	T→C	33.0%	L259L (CTT→CTC)	yghZ →	aldo‑keto reductase
RA	2,012,911	C→T	33.6%	L164L (CTG→TTG)	yghA →	predicted glutathionylspermidine synthase, with NAD(P)‑binding Rossmann‑fold domain
RA	2,013,916	G→A	37.9%	L30L (CTG→TTG)	exbD ←	membrane spanning protein in TonB‑ExbB‑ExbD complex
RA	2,013,998	T→C	51.8%	A2A (GCA→GCG)	exbD ←	membrane spanning protein in TonB‑ExbB‑ExbD complex
RA	2,014,008	T→C	54.2%	intergenic (‑5/+2)	exbD ← / ← exbB	membrane spanning protein in TonB‑ExbB‑ExbD complex/membrane spanning protein in TonB‑ExbB‑ExbD complex
RA	2,014,019	G→A	48.2%	R242R (CGC→CGT)	exbB ←	membrane spanning protein in TonB‑ExbB‑ExbD complex
RA	2,014,583	G→A	43.2%	R54R (CGC→CGT)	exbB ←	membrane spanning protein in TonB‑ExbB‑ExbD complex
RA	2,014,607	T→C	52.4%	V46V (GTA→GTG)	exbB ←	membrane spanning protein in TonB‑ExbB‑ExbD complex
RA	2,015,613	A→G	37.9%	Q206Q (CAA→CAG)	metC →	cystathionine beta‑lyase, PLP‑dependent
RA	2,015,787	T→C	35.8%	R264R (CGT→CGC)	metC →	cystathionine beta‑lyase, PLP‑dependent
RA	2,015,838	G→C	24.8%	P281P (CCG→CCC)	metC →	cystathionine beta‑lyase, PLP‑dependent
RA	2,015,844	T→A	24.6%	V283V (GTT→GTA)	metC →	cystathionine beta‑lyase, PLP‑dependent
RA	2,019,133	C→T	35.6%	P340L (CCG→CTG)	yqhD →	alcohol dehydrogenase, NAD(P)‑dependent
RA	2,020,144	C→T	47.1%	L254L (CTC→CTT)	dkgA →	2,5‑diketo‑D‑gluconate reductase A
RA	2,021,226	G→A	40.2%	V273I (GTT→ATT)	yqhG →	conserved hypothetical protein
RA	2,021,534	C→T	31.8%	L50L (CTA→TTA)	yqhH →	predicted outer membrane lipoprotein
RA	2,022,917	G→A	30.3%	H330H (CAC→CAT)	ygiQ ←	conserved hypothetical protein
RA	2,022,941	A→G	38.3%	C322C (TGT→TGC)	ygiQ ←	conserved hypothetical protein
RA	2,023,139	A→G	35.5%	G256G (GGT→GGC)	ygiQ ←	conserved hypothetical protein
RA	2,023,169	T→C	28.5%	G246G (GGA→GGG)	ygiQ ←	conserved hypothetical protein
RA	2,023,172	A→T	25.8%	P245P (CCT→CCA)	ygiQ ←	conserved hypothetical protein
RA	2,023,923	A→G	45.0%	intergenic (‑17/+94)	ygiQ ← / ← sufI	conserved hypothetical protein/repressor protein for FtsI
RA	2,026,074	A→G	18.2%	R56R (CGT→CGC)	plsC ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	2,026,083	A→C	23.5%	V53V (GTT→GTG)	plsC ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	2,028,140	C→T	60.2%	Q198Q (CAG→CAA)	parC ←	DNA topoisomerase IV, subunit A
RA	2,028,605	G→C	22.3%	R43R (CGC→CGG)	parC ←	DNA topoisomerase IV, subunit A
RA	2,028,614	A→G	21.6%	P40P (CCT→CCC)	parC ←	DNA topoisomerase IV, subunit A
RA	2,029,444	C→A	31.6%	A467A (GCG→GCT)	parE ←	DNA topoisomerase IV, subunit B
RA	2,031,571	A→G	59.4%	D237D (GAT→GAC)	cpdA ←	cyclic 3',5'‑adenosine monophosphate phosphodiesterase
RA	2,031,586	G→A	43.0%	S232S (TCC→TCT)	cpdA ←	cyclic 3',5'‑adenosine monophosphate phosphodiesterase
RA	2,034,921	A→C	34.0%	A453A (GCA→GCC)	tolC →	transport channel
RA	2,036,328	C→T	46.8%	L154L (CTG→TTG)	ygiC →	hypothetical protein
RA	2,036,339	A→G	41.1%	K157K (AAA→AAG)	ygiC →	hypothetical protein
RA	2,036,471	T→C	35.1%	I201I (ATT→ATC)	ygiC →	hypothetical protein
RA	2,036,477	T→C	41.3%	T203T (ACT→ACC)	ygiC →	hypothetical protein
RA	2,036,495	T→C	34.1%	D209D (GAT→GAC)	ygiC →	hypothetical protein
RA	2,039,441	A→G	27.1%	I158I (ATT→ATC)	ribB ←	3,4 dihydroxy‑2‑butanone‑4‑phosphate synthase
RA	2,039,447	T→C	39.8%	A156A (GCA→GCG)	ribB ←	3,4 dihydroxy‑2‑butanone‑4‑phosphate synthase
RA	2,039,489	A→C	60.6%	A142A (GCT→GCG)	ribB ←	3,4 dihydroxy‑2‑butanone‑4‑phosphate synthase
RA	2,039,492	G→A	60.5%	R141R (CGC→CGT)	ribB ←	3,4 dihydroxy‑2‑butanone‑4‑phosphate synthase
RA	2,044,257	A→G	100%	V227V (GTA→GTG)	yqiK →	conserved hypothetical protein
RA	2,044,263	T→C	57.0%	V229V (GTT→GTC)	yqiK →	conserved hypothetical protein
RA	2,044,266	G→A	56.3%	A230A (GCG→GCA)	yqiK →	conserved hypothetical protein
RA	2,044,275	A→G	56.3%	E233E (GAA→GAG)	yqiK →	conserved hypothetical protein
RA	2,044,281	T→C	56.3%	N235N (AAT→AAC)	yqiK →	conserved hypothetical protein
RA	2,044,284	C→T	42.0%	R236R (CGC→CGT)	yqiK →	conserved hypothetical protein
RA	2,044,290	G→A	42.0%	A238A (GCG→GCA)	yqiK →	conserved hypothetical protein
RA	2,044,293	A→T	36.4%	L239L (CTA→CTT)	yqiK →	conserved hypothetical protein
RA	2,048,393	T→A	57.4%	I654I (ATA→ATT)	glnE ←	fused deadenylyltransferase and adenylyltransferase for glutamine synthetase
RA	2,048,405	C→T	48.8%	A650A (GCG→GCA)	glnE ←	fused deadenylyltransferase and adenylyltransferase for glutamine synthetase
RA	2,048,438	C→T	45.6%	V639V (GTG→GTA)	glnE ←	fused deadenylyltransferase and adenylyltransferase for glutamine synthetase
RA	2,049,641	G→A	18.5%	S238S (AGC→AGT)	glnE ←	fused deadenylyltransferase and adenylyltransferase for glutamine synthetase
RA	2,051,274	A→G	38.8%	G135G (GGT→GGC)	ygiF ←	predicted adenylate cyclase
RA	2,052,180	T→G	44.2%	T87T (ACT→ACG)	htrG →	predicted signal transduction protein
RA	2,052,195	C→T	46.9%	R92R (CGC→CGT)	htrG →	predicted signal transduction protein
RA	2,053,383	G→A	43.7%	G260G (GGG→GGA)	cca →	fused tRNA nucleotidyl transferase and 2'3'‑cyclic phosphodiesterase/2'nucleotidase/phosphatase
RA	2,053,401	C→T	50.7%	L266L (CTC→CTT)	cca →	fused tRNA nucleotidyl transferase and 2'3'‑cyclic phosphodiesterase/2'nucleotidase/phosphatase
RA	2,053,407	G→A	52.1%	P268P (CCG→CCA)	cca →	fused tRNA nucleotidyl transferase and 2'3'‑cyclic phosphodiesterase/2'nucleotidase/phosphatase
RA	2,055,817	C→T	34.7%	S137S (AGC→AGT)	ygiH →	conserved inner membrane protein
RA	2,055,820	A→T	36.3%	G138G (GGA→GGT)	ygiH →	conserved inner membrane protein
RA	2,056,976	T→A	42.6%	intergenic (‑7/‑200)	ygiP ← / → ttdA	predicted DNA‑binding transcriptional regulator/L‑tartrate dehydratase, alpha subunit
RA	2,056,988	G→T	43.2%	intergenic (‑19/‑188)	ygiP ← / → ttdA	predicted DNA‑binding transcriptional regulator/L‑tartrate dehydratase, alpha subunit
RA	2,057,310	G→A	35.6%	T45T (ACG→ACA)	ttdA →	L‑tartrate dehydratase, alpha subunit
RA	2,057,322	G→A	29.3%	G49G (GGG→GGA)	ttdA →	L‑tartrate dehydratase, alpha subunit
RA	2,057,328	T→C	23.7%	I51I (ATT→ATC)	ttdA →	L‑tartrate dehydratase, alpha subunit
RA	2,057,337	T→C	23.4%	H54H (CAT→CAC)	ttdA →	L‑tartrate dehydratase, alpha subunit
RA	2,057,922	C→T	32.2%	T249T (ACC→ACT)	ttdA →	L‑tartrate dehydratase, alpha subunit
RA	2,057,946	A→G	47.8%	V257V (GTA→GTG)	ttdA →	L‑tartrate dehydratase, alpha subunit
RA	2,057,964	C→T	36.0%	A263A (GCC→GCT)	ttdA →	L‑tartrate dehydratase, alpha subunit
RA	2,058,356	T→C	56.9%	I91I (ATT→ATC)	ttdB →	L‑tartrate dehydratase, beta subunit
RA	2,058,584	T→A	37.2%	I167I (ATT→ATA)	ttdB →	L‑tartrate dehydratase, beta subunit
RA	2,060,531	C→T	53.3%	A242A (GCG→GCA)	ygjD ←	predicted peptidase
RA	2,062,527	A→G	61.4%	T236T (ACA→ACG)	dnaG →	DNA primase
RA	2,066,109	A→C	38.6%	T26T (ACT→ACG)	ygjF ←	G/U mismatch‑specific DNA glycosylase
RA	2,067,040	T→C	29.0%	K55K (AAA→AAG)	yqjH ←	predicted siderophore interacting protein
RA	2,067,061	A→G	38.2%	R48R (CGT→CGC)	yqjH ←	predicted siderophore interacting protein
RA	2,070,061	A→G	38.6%	intergenic (‑272/‑119)	aer ← / → ygjG	fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component/putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,070,071	A→G	43.7%	intergenic (‑282/‑109)	aer ← / → ygjG	fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component/putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,070,074	G→A	51.6%	intergenic (‑285/‑106)	aer ← / → ygjG	fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component/putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,070,092	A→G	47.1%	intergenic (‑303/‑88)	aer ← / → ygjG	fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component/putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,070,105	G→A	72.9%	intergenic (‑316/‑75)	aer ← / → ygjG	fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component/putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,070,106	A→C	72.1%	intergenic (‑317/‑74)	aer ← / → ygjG	fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component/putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,070,836	G→A	31.9%	V219V (GTG→GTA)	ygjG →	putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,070,862	G→T	22.5%	R228L (CGC→CTC)	ygjG →	putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,070,902	G→T	35.2%	V241V (GTG→GTT)	ygjG →	putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,071,466	T→C	32.7%	N429N (AAT→AAC)	ygjG →	putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,071,472	C→T	29.4%	A431A (GCC→GCT)	ygjG →	putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
RA	2,071,675	G→A	58.6%	L96L (CTG→TTG)	ygjH ←	conserved hypothetical protein
RA	2,073,249	C→T	18.0%	intergenic (+87/‑97)	ebgR → / → ebgA	DNA‑binding transcriptional repressor/cryptic beta‑D‑galactosidase, alpha subunit
RA	2,073,250	T→C	18.3%	intergenic (+88/‑96)	ebgR → / → ebgA	DNA‑binding transcriptional repressor/cryptic beta‑D‑galactosidase, alpha subunit
RA	2,073,927	A→G	46.3%	S194S (TCA→TCG)	ebgA →	cryptic beta‑D‑galactosidase, alpha subunit
RA	2,078,055	A→G	67.6%	T154T (ACT→ACC)	uxaA ←	altronate hydrolase
RA	2,078,064	G→A	44.9%	A151A (GCC→GCT)	uxaA ←	altronate hydrolase
RA	2,078,085	A→G	39.3%	F144F (TTT→TTC)	uxaA ←	altronate hydrolase
RA	2,078,091	G→A	47.3%	N142N (AAC→AAT)	uxaA ←	altronate hydrolase
RA	2,078,094	C→T	47.3%	Q141Q (CAG→CAA)	uxaA ←	altronate hydrolase
RA	2,080,902	A→G	40.5%	V199V (GTA→GTG)	exuT →	hexuronate transporter
RA	2,080,941	A→G	50.6%	A212A (GCA→GCG)	exuT →	hexuronate transporter
RA	2,081,478	C→T	27.6%	S391S (TCC→TCT)	exuT →	hexuronate transporter
RA	2,081,481	T→C	27.4%	D392D (GAT→GAC)	exuT →	hexuronate transporter
RA	2,081,487	T→C	27.2%	F394F (TTT→TTC)	exuT →	hexuronate transporter
RA	2,082,240	A→G	42.0%	E129E (GAA→GAG)	exuR →	DNA‑binding transcriptional repressor
RA	2,082,246	G→A	48.9%	A131A (GCG→GCA)	exuR →	DNA‑binding transcriptional repressor
RA	2,082,252	C→T	48.9%	G133G (GGC→GGT)	exuR →	DNA‑binding transcriptional repressor
RA	2,082,342	G→T	27.9%	V163V (GTG→GTT)	exuR →	DNA‑binding transcriptional repressor
RA	2,082,504	T→C	34.5%	H217H (CAT→CAC)	exuR →	DNA‑binding transcriptional repressor
RA	2,083,454	C→T	37.8%	S160S (AGC→AGT)	yqjA →	conserved inner membrane protein
RA	2,084,365	G→A	45.9%	Q65Q (CAG→CAA)	yqjC →	conserved hypothetical protein
RA	2,086,423	G→A	20.1%	A66A (GCG→GCA)	yqjG →	predicted S‑transferase
RA	2,086,444	C→T	18.5%	R73R (CGC→CGT)	yqjG →	predicted S‑transferase
RA	2,086,447	A→G	20.4%	K74K (AAA→AAG)	yqjG →	predicted S‑transferase
RA	2,086,684	C→A	57.7%	I153I (ATC→ATA)	yqjG →	predicted S‑transferase
RA	2,086,717	C→T	80.8%	G164G (GGC→GGT)	yqjG →	predicted S‑transferase
RA	2,086,868	G→A	52.3%	E215K (GAA→AAA)	yqjG →	predicted S‑transferase
RA	2,086,879	A→G	47.3%	A218A (GCA→GCG)	yqjG →	predicted S‑transferase
RA	2,086,888	G→A	35.6%	E221E (GAG→GAA)	yqjG →	predicted S‑transferase
RA	2,086,900	C→T	43.0%	G225G (GGC→GGT)	yqjG →	predicted S‑transferase
RA	2,086,906	T→C	57.9%	H227H (CAT→CAC)	yqjG →	predicted S‑transferase
RA	2,086,957	T→C	28.3%	T244T (ACT→ACC)	yqjG →	predicted S‑transferase
RA	2,087,622	G→A	43.3%	L39L (CTG→CTA)	yhaH →	predicted inner membrane protein
RA	2,087,649	C→T	42.4%	R48R (CGC→CGT)	yhaH →	predicted inner membrane protein
RA	2,087,652	T→C	44.7%	A49A (GCT→GCC)	yhaH →	predicted inner membrane protein
RA	2,087,781	T→C	33.9%	F92F (TTT→TTC)	yhaH →	predicted inner membrane protein
RA	2,088,530	T→C	34.7%	N296S (AAC→AGC)	yhaJ ←	predicted DNA‑binding transcriptional regulator
RA	2,088,571	T→C	34.4%	E282E (GAA→GAG)	yhaJ ←	predicted DNA‑binding transcriptional regulator
RA	2,089,147	A→G	47.8%	A90A (GCT→GCC)	yhaJ ←	predicted DNA‑binding transcriptional regulator
RA	2,092,496	A→G	31.0%	S218S (AGT→AGC)	yhaO ←	predicted transporter
RA	2,094,183	C→T	49.3%	G223G (GGG→GGA)	tdcG ←	L‑serine dehydratase 3
RA	2,094,432	A→G	41.2%	S140S (AGT→AGC)	tdcG ←	L‑serine dehydratase 3
RA	2,095,825	A→G	37.2%	L372L (TTG→CTG)	garK ←	glycerate kinase I
RA	2,097,921	C→T	67.3%	V242I (GTC→ATC)	garL ←	alpha‑dehydro‑beta‑deoxy‑D‑glucarate aldolase
RA	2,099,098	A→G	39.8%	G299G (GGT→GGC)	garP ←	predicted (D)‑galactarate transporter
RA	2,099,110	T→C	50.0%	P295P (CCA→CCG)	garP ←	predicted (D)‑galactarate transporter
RA	2,101,280	C→G	26.2%	G304G (GGC→GGG)	garD →	(D)‑galactarate dehydrogenase
RA	2,101,296	C→T	16.6%	L310L (CTG→TTG)	garD →	(D)‑galactarate dehydrogenase
RA	2,101,487	A→G	29.7%	K373K (AAA→AAG)	garD →	(D)‑galactarate dehydrogenase
RA	2,101,493	T→C	29.7%	G375G (GGT→GGC)	garD →	(D)‑galactarate dehydrogenase
RA	2,101,496	G→C	29.8%	L376L (CTG→CTC)	garD →	(D)‑galactarate dehydrogenase
RA	2,101,499	A→C	31.1%	A377A (GCA→GCC)	garD →	(D)‑galactarate dehydrogenase
RA	2,103,141	A→G	32.8%	A204A (GCT→GCC)	agaR ←	DNA‑binding transcriptional dual regulator
RA	2,103,159	T→C	31.2%	T198T (ACA→ACG)	agaR ←	DNA‑binding transcriptional dual regulator
RA	2,103,167	C→T	24.1%	V196I (GTC→ATC)	agaR ←	DNA‑binding transcriptional dual regulator
RA	2,103,173	G→A	24.1%	R194C (CGC→TGC)	agaR ←	DNA‑binding transcriptional dual regulator
RA	2,103,531	C→T	46.3%	T74T (ACG→ACA)	agaR ←	DNA‑binding transcriptional dual regulator
RA	2,103,973	A→G	26.6%	intergenic (‑221/‑28)	agaR ← / → kbaZ	DNA‑binding transcriptional dual regulator/tagatose 6‑phosphate aldolase 1, kbaZ subunit
RA	2,103,985	T→G	32.2%	intergenic (‑233/‑16)	agaR ← / → kbaZ	DNA‑binding transcriptional dual regulator/tagatose 6‑phosphate aldolase 1, kbaZ subunit
RA	2,103,998	A→C	31.7%	intergenic (‑246/‑3)	agaR ← / → kbaZ	DNA‑binding transcriptional dual regulator/tagatose 6‑phosphate aldolase 1, kbaZ subunit
RA	2,104,372	C→T	14.0%	I124I (ATC→ATT)	kbaZ →	tagatose 6‑phosphate aldolase 1, kbaZ subunit
RA	2,105,113	A→T	35.3%	V371V (GTA→GTT)	kbaZ →	tagatose 6‑phosphate aldolase 1, kbaZ subunit
RA	2,105,324	C→T	49.4%	S7S (AGC→AGT)	agaV →	N‑acetylgalactosamine‑specific enzyme IIB component of PTS
RA	2,105,863	C→T	40.6%	pseudogene (76/402 nt)	agaW →	ECK3122:JW3103:b3134; N‑acetylgalactosamine‑specific enzyme IIC component of PTS, fragment
RA	2,106,450	A→G	31.7%	H81R (CAC→CGC)	agaA →	predicted truncated N‑acetylgalactosamine‑6‑phosphate deacetylase
RA	2,106,475	T→C	40.9%	S89S (TCT→TCC)	agaA →	predicted truncated N‑acetylgalactosamine‑6‑phosphate deacetylase
RA	2,107,455	G→A	60.0%	P131P (CCG→CCA)	agaS →	tagatose‑6‑phosphate ketose/aldose isomerase
RA	2,108,247	T→C	33.6%	T6T (ACT→ACC)	kbaY →	tagatose 6‑phosphate aldolase 1, kbaY subunit
RA	2,108,643	G→C	36.5%	L138L (CTG→CTC)	kbaY →	tagatose 6‑phosphate aldolase 1, kbaY subunit
RA	2,108,982	G→T	49.9%	P251P (CCG→CCT)	kbaY →	tagatose 6‑phosphate aldolase 1, kbaY subunit
RA	2,109,346	A→G	28.0%	A30A (GCA→GCG)	agaB →	N‑acetylgalactosamine‑specific enzyme IIB component of PTS
RA	2,109,353	C→T	36.1%	L33L (CTG→TTG)	agaB →	N‑acetylgalactosamine‑specific enzyme IIB component of PTS
RA	2,117,769	C→T	38.2%	K218K (AAG→AAA)	yraL ←	predicted methyltransferase
RA	2,121,861	A→G	17.0%	A122A (GCA→GCG)	yraP →	hypothetical protein
RA	2,122,104	C→A	28.5%	intergenic (+33/+81)	yraP → / ← yraQ	hypothetical protein/predicted permease
RA	2,122,416	T→C	31.2%	A270A (GCA→GCG)	yraQ ←	predicted permease
RA	2,125,198	T→C	62.5%	V49A (GTG→GCG)	yhbQ →	predicted endonuclease
RA	2,125,208	G→A	61.9%	A52A (GCG→GCA)	yhbQ →	predicted endonuclease
RA	2,128,106	C→T	35.0%	S177S (TCC→TCT)	yhbV →	predicted protease
RA	2,128,109	C→T	35.0%	A178A (GCC→GCT)	yhbV →	predicted protease
RA	2,129,062	C→T	21.5%	S176S (AGC→AGT)	yhbW →	hypothetical protein
RA	2,129,065	G→A	21.5%	A177A (GCG→GCA)	yhbW →	hypothetical protein
RA	2,130,221	A→G	15.9%	C228C (TGT→TGC)	mtr ←	tryptophan transporter of high affinity
RA	2,130,401	A→G	41.5%	F168F (TTT→TTC)	mtr ←	tryptophan transporter of high affinity
RA	2,130,596	G→A	16.2%	T103T (ACC→ACT)	mtr ←	tryptophan transporter of high affinity
RA	2,131,391	A→G	43.2%	I519I (ATT→ATC)	deaD ←	ATP‑dependent RNA helicase
RA	2,131,478	G→A	39.2%	R490R (CGC→CGT)	deaD ←	ATP‑dependent RNA helicase
RA	2,131,486	G→A	42.4%	L488L (CTG→TTG)	deaD ←	ATP‑dependent RNA helicase
RA	2,131,514	A→G	54.8%	R478R (CGT→CGC)	deaD ←	ATP‑dependent RNA helicase
RA	2,131,628	T→A	37.8%	V440V (GTA→GTT)	deaD ←	ATP‑dependent RNA helicase
RA	2,131,631	G→A	34.2%	I439I (ATC→ATT)	deaD ←	ATP‑dependent RNA helicase
RA	2,135,716	A→T	22.4%	T205T (ACT→ACA)	pnp ←	polynucleotide phosphorylase/polyadenylase
RA	2,135,734	A→G	28.7%	D199D (GAT→GAC)	pnp ←	polynucleotide phosphorylase/polyadenylase
RA	2,135,755	C→T	14.3%	E192E (GAG→GAA)	pnp ←	polynucleotide phosphorylase/polyadenylase
RA	2,137,295	G→A	47.2%	G192G (GGC→GGT)	truB ←	tRNA pseudouridine synthase
RA	2,137,307	A→G	55.8%	G188G (GGT→GGC)	truB ←	tRNA pseudouridine synthase
RA	2,137,310	C→G	57.7%	L187L (CTG→CTC)	truB ←	tRNA pseudouridine synthase
RA	2,137,313	G→A	56.7%	D186D (GAC→GAT)	truB ←	tRNA pseudouridine synthase
RA	2,137,316	A→G	49.2%	D185D (GAT→GAC)	truB ←	tRNA pseudouridine synthase
RA	2,137,325	G→A	49.2%	T182T (ACC→ACT)	truB ←	tRNA pseudouridine synthase
RA	2,137,703	C→T	44.7%	P56P (CCG→CCA)	truB ←	tRNA pseudouridine synthase
RA	2,138,498	G→A	59.7%	D870D (GAC→GAT)	infB ←	fused protein chain initiation factor 2, IF2
RA	2,138,570	G→T	36.9%	R846R (CGC→CGA)	infB ←	fused protein chain initiation factor 2, IF2
RA	2,139,470	G→A	58.1%	D546D (GAC→GAT)	infB ←	fused protein chain initiation factor 2, IF2
RA	2,139,485	G→A	35.3%	I541I (ATC→ATT)	infB ←	fused protein chain initiation factor 2, IF2
RA	2,139,593	A→G	62.0%	A505A (GCT→GCC)	infB ←	fused protein chain initiation factor 2, IF2
RA	2,139,611	C→T	39.6%	K499K (AAG→AAA)	infB ←	fused protein chain initiation factor 2, IF2
RA	2,139,620	T→A	41.6%	A496A (GCA→GCT)	infB ←	fused protein chain initiation factor 2, IF2
RA	2,141,978	T→C	27.2%	P214P (CCA→CCG)	nusA ←	transcription termination/antitermination L factor
RA	2,142,023	A→G	19.0%	R199R (CGT→CGC)	nusA ←	transcription termination/antitermination L factor
RA	2,142,026	A→G	19.0%	T198T (ACT→ACC)	nusA ←	transcription termination/antitermination L factor
RA	2,143,681	G→A	21.7%	intergenic (‑299/‑49)	metY ← / → argG	tRNA‑Met/argininosuccinate synthetase
RA	2,143,685	G→A	21.5%	intergenic (‑303/‑45)	metY ← / → argG	tRNA‑Met/argininosuccinate synthetase
RA	2,144,059	T→C	42.6%	T110T (ACT→ACC)	argG →	argininosuccinate synthetase
RA	2,144,062	T→C	43.4%	G111G (GGT→GGC)	argG →	argininosuccinate synthetase
RA	2,144,080	G→T	39.0%	A117A (GCG→GCT)	argG →	argininosuccinate synthetase
RA	2,144,401	A→G	48.3%	K224K (AAA→AAG)	argG →	argininosuccinate synthetase
RA	2,144,404	C→T	41.1%	F225F (TTC→TTT)	argG →	argininosuccinate synthetase
RA	2,144,422	G→A	32.1%	K231K (AAG→AAA)	argG →	argininosuccinate synthetase
RA	2,145,423	A→G	58.9%	R428R (CGT→CGC)	yhbX ←	predicted hydrolase, inner membrane
RA	2,145,954	A→G	54.2%	V251V (GTT→GTC)	yhbX ←	predicted hydrolase, inner membrane
RA	2,146,494	A→T	47.9%	T71T (ACT→ACA)	yhbX ←	predicted hydrolase, inner membrane
RA	2,146,514	C→T	40.4%	A65T (GCA→ACA)	yhbX ←	predicted hydrolase, inner membrane
RA	2,147,953	T→C	50.0%	N404S (AAC→AGC)	glmM ←	phosphoglucosamine mutase
RA	2,151,144	G→A	51.9%	A295A (GCC→GCT)	ftsH ←	protease, ATP‑dependent zinc‑metallo
RA	2,151,174	G→A	48.6%	F285F (TTC→TTT)	ftsH ←	protease, ATP‑dependent zinc‑metallo
RA	2,151,177	G→A	51.4%	G284G (GGC→GGT)	ftsH ←	protease, ATP‑dependent zinc‑metallo
RA	2,156,251	A→G	38.8%	G199G (GGT→GGC)	obgE ←	GTPase involved in cell partioning and DNA repair
RA	2,156,416	G→A	42.1%	G144G (GGC→GGT)	obgE ←	GTPase involved in cell partioning and DNA repair
RA	2,156,422	G→A	45.0%	T142T (ACC→ACT)	obgE ←	GTPase involved in cell partioning and DNA repair
RA	2,156,434	C→T	39.6%	P138P (CCG→CCA)	obgE ←	GTPase involved in cell partioning and DNA repair
RA	2,156,449	G→T	52.9%	S133S (TCC→TCA)	obgE ←	GTPase involved in cell partioning and DNA repair
RA	2,156,455	T→C	53.0%	K131K (AAA→AAG)	obgE ←	GTPase involved in cell partioning and DNA repair
RA	2,156,629	G→A	71.1%	G73G (GGC→GGT)	obgE ←	GTPase involved in cell partioning and DNA repair
RA	2,156,632	A→G	71.2%	N72N (AAT→AAC)	obgE ←	GTPase involved in cell partioning and DNA repair
RA	2,159,306	T→C	53.4%	Y168Y (TAT→TAC)	ispB →	octaprenyl diphosphate synthase
RA	2,159,312	A→G	53.8%	K170K (AAA→AAG)	ispB →	octaprenyl diphosphate synthase
RA	2,159,315	C→T	49.8%	T171T (ACC→ACT)	ispB →	octaprenyl diphosphate synthase
RA	2,160,046	G→A	21.1%	A15A (GCG→GCA)	sfsB →	DNA‑binding transcriptional regulator
RA	2,160,326	G→A	100%	intergenic (+46/+2)	sfsB → / ← murA	DNA‑binding transcriptional regulator/UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
RA	2,160,331	T→C	100%	E419E (GAA→GAG)	murA ←	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
RA	2,160,370	C→T	62.8%	L406L (CTG→CTA)	murA ←	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
RA	2,161,129	A→G	51.1%	G153G (GGT→GGC)	murA ←	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
RA	2,165,946	G→A	42.6%	V193V (GTG→GTA)	yrbG →	predicted calcium/sodium:proton antiporter
RA	2,167,425	A→G	41.5%	I20M (ATA→ATG)	kdsC →	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
RA	2,170,169	G→A	61.2%	L120L (TTG→TTA)	rpoN →	RNA polymerase, sigma 54 (sigma N) factor
RA	2,171,234	A→G	45.1%	Q475Q (CAA→CAG)	rpoN →	RNA polymerase, sigma 54 (sigma N) factor
RA	2,172,453	C→A	56.6%	L82L (CTC→CTA)	yhbJ →	hypothetical protein with nucleoside triphosphate hydrolase domain
RA	2,173,038	T→G	25.8%	R277R (CGT→CGG)	yhbJ →	hypothetical protein with nucleoside triphosphate hydrolase domain
RA	2,173,752	G→A	24.8%	V70I (GTT→ATT)	yrbL →	hypothetical protein
RA	2,175,971	T→C	54.8%	G716G (GGA→GGG)	arcB ←	hybrid sensory histidine kinase in two‑component regulatory system with ArcA
RA	2,177,633	A→G	42.4%	D162D (GAT→GAC)	arcB ←	hybrid sensory histidine kinase in two‑component regulatory system with ArcA
RA	2,179,432	A→G	65.4%	intergenic (‑289/‑293)	yhcC ← / → gltB	predicted Fe‑S oxidoreductase/glutamate synthase, large subunit
RA	2,179,450	A→T	55.5%	intergenic (‑307/‑275)	yhcC ← / → gltB	predicted Fe‑S oxidoreductase/glutamate synthase, large subunit
RA	2,179,455	A→G	56.3%	intergenic (‑312/‑270)	yhcC ← / → gltB	predicted Fe‑S oxidoreductase/glutamate synthase, large subunit
RA	2,182,550	T→G	56.3%	A942A (GCT→GCG)	gltB →	glutamate synthase, large subunit
RA	2,183,120	C→T	30.0%	G1132G (GGC→GGT)	gltB →	glutamate synthase, large subunit
RA	2,183,132	A→G	30.8%	L1136L (CTA→CTG)	gltB →	glutamate synthase, large subunit
RA	2,183,135	T→A	30.9%	R1137R (CGT→CGA)	gltB →	glutamate synthase, large subunit
RA	2,183,144	T→C	24.9%	H1140H (CAT→CAC)	gltB →	glutamate synthase, large subunit
RA	2,183,240	G→A	46.1%	E1172E (GAG→GAA)	gltB →	glutamate synthase, large subunit
RA	2,183,279	T→G	37.6%	L1185L (CTT→CTG)	gltB →	glutamate synthase, large subunit
RA	2,183,384	G→A	20.3%	E1220E (GAG→GAA)	gltB →	glutamate synthase, large subunit
RA	2,183,393	A→G	37.8%	E1223E (GAA→GAG)	gltB →	glutamate synthase, large subunit
RA	2,183,396	G→A	37.1%	P1224P (CCG→CCA)	gltB →	glutamate synthase, large subunit
RA	2,183,400	C→G	40.2%	P1226A (CCA→GCA)	gltB →	glutamate synthase, large subunit
RA	2,183,420	C→T	50.6%	C1232C (TGC→TGT)	gltB →	glutamate synthase, large subunit
RA	2,183,528	T→C	63.2%	I1268I (ATT→ATC)	gltB →	glutamate synthase, large subunit
RA	2,183,975	T→C	22.3%	G1417G (GGT→GGC)	gltB →	glutamate synthase, large subunit
RA	2,183,990	C→T	40.2%	G1422G (GGC→GGT)	gltB →	glutamate synthase, large subunit
RA	2,183,993	T→C	35.9%	G1423G (GGT→GGC)	gltB →	glutamate synthase, large subunit
RA	2,185,556	C→T	48.4%	I422I (ATC→ATT)	gltD →	glutamate synthase, 4Fe‑4S protein, small subunit
RA	2,186,816	G→A	79.1%	S347S (AGC→AGT)	nanT ←	sialic acid transporter
RA	2,187,412	A→G	30.3%	L149L (TTG→CTG)	nanT ←	sialic acid transporter
RA	2,187,440	T→C	32.5%	K139K (AAA→AAG)	nanT ←	sialic acid transporter
RA	2,187,797	G→C	27.2%	R20R (CGC→CGG)	nanT ←	sialic acid transporter
RA	2,187,809	A→G	35.9%	R16R (CGT→CGC)	nanT ←	sialic acid transporter
RA	2,187,815	G→A	51.4%	L14L (CTC→CTT)	nanT ←	sialic acid transporter
RA	2,188,466	A→C	44.8%	G131G (GGT→GGG)	nanA ←	N‑acetylneuraminate lyase
RA	2,188,658	G→A	76.0%	A67A (GCC→GCT)	nanA ←	N‑acetylneuraminate lyase
RA	2,188,733	T→C	46.2%	L42L (TTA→TTG)	nanA ←	N‑acetylneuraminate lyase
RA	2,189,346	A→G	32.3%	H142H (CAT→CAC)	nanR ←	DNA‑binding transcriptional dual regulator
RA	2,195,634	C→T	44.7%	S54S (AGC→AGT)	yhcB →	conserved hypothetical protein
RA	2,196,732	C→A	32.4%	G236G (GGC→GGA)	degQ →	serine endoprotease, periplasmic
RA	2,196,738	G→T	32.4%	G238G (GGG→GGT)	degQ →	serine endoprotease, periplasmic
RA	2,198,000	T→C	40.5%	I173I (ATT→ATC)	degS →	serine endoprotease, periplasmic
RA	2,198,231	C→T	32.9%	R250R (CGC→CGT)	degS →	serine endoprotease, periplasmic
RA	2,198,237	T→C	32.2%	G252G (GGT→GGC)	degS →	serine endoprotease, periplasmic
RA	2,198,240	C→T	34.8%	R253R (CGC→CGT)	degS →	serine endoprotease, periplasmic
RA	2,198,249	C→T	41.6%	R256R (CGC→CGT)	degS →	serine endoprotease, periplasmic
RA	2,200,293	C→T	53.7%	G103G (GGC→GGT)	argR →	DNA‑binding transcriptional dual regulator, L‑arginine‑binding
RA	2,200,383	C→T	36.5%	T133T (ACC→ACT)	argR →	DNA‑binding transcriptional dual regulator, L‑arginine‑binding
RA	2,200,404	A→C	25.8%	T140T (ACA→ACC)	argR →	DNA‑binding transcriptional dual regulator, L‑arginine‑binding
RA	2,200,413	C→G	30.0%	D143E (GAC→GAG)	argR →	DNA‑binding transcriptional dual regulator, L‑arginine‑binding
RA	2,200,724	C→T	39.2%	intergenic (+269/‑96)	argR → / → yhcN	DNA‑binding transcriptional dual regulator, L‑arginine‑binding/conserved hypothetical protein
RA	2,202,379	G→A	25.2%	S364S (TCC→TCT)	aaeB ←	p‑hydroxybenzoic acid efflux system component
RA	2,203,776	T→C	73.2%	A211A (GCA→GCG)	aaeA ←	p‑hydroxybenzoic acid efflux system component
RA	2,203,788	C→A	81.7%	P207P (CCG→CCT)	aaeA ←	p‑hydroxybenzoic acid efflux system component
RA	2,203,791	A→G	75.5%	R206R (CGT→CGC)	aaeA ←	p‑hydroxybenzoic acid efflux system component
RA	2,205,665	G→A	60.3%	L288L (CTG→CTA)	aaeR →	predicted DNA‑binding transcriptional regulator, efflux system
RA	2,206,243	G→A	29.7%	A356A (GCC→GCT)	tldD ←	predicted peptidase
RA	2,209,246	C→T	58.2%	L765L (TTG→TTA)	yhdP ←	conserved membrane protein, predicted transporter
RA	2,209,265	T→G	45.9%	E759A (GAA→GCA)	yhdP ←	conserved membrane protein, predicted transporter
RA	2,209,600	A→G	34.7%	S647S (TCT→TCC)	yhdP ←	conserved membrane protein, predicted transporter
RA	2,210,179	A→C	29.6%	T454T (ACT→ACG)	yhdP ←	conserved membrane protein, predicted transporter
RA	2,212,202	G→C	41.2%	L292L (CTC→CTG)	rng ←	ribonuclease G
RA	2,212,787	A→G	35.7%	V97V (GTT→GTC)	rng ←	ribonuclease G
RA	2,214,266	G→A	58.1%	A332V (GCT→GTT)	mreC ←	cell wall structural complex MreBCD transmembrane component MreC
RA	2,217,619	A→G	54.3%	V332V (GTT→GTC)	yhdA ←	conserved inner membrane protein
RA	2,218,436	A→G	45.1%	V60A (GTA→GCA) ‡	yhdA ←	conserved inner membrane protein
RA	2,218,437	C→T	45.0%	V60I (GTA→ATA) ‡	yhdA ←	conserved inner membrane protein
RA	2,218,861	C→T	37.3%	V32V (GTC→GTT)	yhdH →	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	2,219,341	T→C	37.0%	A192A (GCT→GCC)	yhdH →	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	2,219,348	G→A	34.4%	V195I (GTT→ATT)	yhdH →	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	2,219,353	C→T	33.8%	L196L (CTC→CTT)	yhdH →	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	2,219,359	T→C	41.6%	R198R (CGT→CGC)	yhdH →	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding
RA	2,220,128	A→T	44.5%	intergenic (+388/‑590)	yhdH → / → accB	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding/acetyl CoA carboxylase, BCCP subunit
RA	2,220,132	A→G	37.6%	intergenic (+392/‑586)	yhdH → / → accB	predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding/acetyl CoA carboxylase, BCCP subunit
RA	2,220,870	A→T	31.3%	P51P (CCA→CCT)	accB →	acetyl CoA carboxylase, BCCP subunit
RA	2,221,351	T→C	34.7%	I51I (ATT→ATC)	accC →	acetyl‑CoA carboxylase, biotin carboxylase subunit
RA	2,222,098	A→T	20.3%	T300T (ACA→ACT)	accC →	acetyl‑CoA carboxylase, biotin carboxylase subunit
RA	2,223,383	T→C	35.1%	F165F (TTT→TTC)	panF →	pantothenate:sodium symporter
RA	2,223,401	A→G	21.5%	L171L (TTA→TTG)	panF →	pantothenate:sodium symporter
RA	2,224,699	T→A	100%	P116P (CCT→CCA)	prmA →	methylase for 50S ribosomal subunit protein L11
RA	2,224,918	C→T	42.7%	I189I (ATC→ATT)	prmA →	methylase for 50S ribosomal subunit protein L11
RA	2,224,948	T→C	57.4%	D199D (GAT→GAC)	prmA →	methylase for 50S ribosomal subunit protein L11
RA	2,224,954	C→T	49.4%	A201A (GCC→GCT)	prmA →	methylase for 50S ribosomal subunit protein L11
RA	2,225,948	G→C	40.7%	V129V (GTG→GTC)	dusB →	tRNA‑dihydrouridine synthase B
RA	2,225,978	G→A	45.9%	K139K (AAG→AAA)	dusB →	tRNA‑dihydrouridine synthase B
RA	2,225,987	C→T	43.8%	T142T (ACC→ACT)	dusB →	tRNA‑dihydrouridine synthase B
RA	2,227,641	T→C	58.4%	G238G (GGT→GGC)	yhdY →	predicted amino‑acid transporter subunit
RA	2,228,311	T→G	46.2%	V105V (GTT→GTG)	yhdZ →	predicted amino‑acid transporter subunit
RA	2,228,314	A→G	45.2%	L106L (TTA→TTG)	yhdZ →	predicted amino‑acid transporter subunit
RA	2,228,356	T→A	30.5%	P120P (CCT→CCA)	yhdZ →	predicted amino‑acid transporter subunit
RA	2,234,608	G→C	30.5%	intergenic (‑368/‑247)	rrsD ← / → purH	16S ribosomal RNA/fused IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase
RA	2,235,108	A→T	44.8%	Q85L (CAG→CTG)	purH →	fused IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase
RA	2,237,256	C→T	48.1%	T267T (ACC→ACT)	purD →	phosphoribosylglycinamide synthetase phosphoribosylamine‑glycine ligase
RA	2,237,404	A→G	40.2%	S317G (AGC→GGC)	purD →	phosphoribosylglycinamide synthetase phosphoribosylamine‑glycine ligase
RA	2,237,409	A→G	40.0%	K318K (AAA→AAG)	purD →	phosphoribosylglycinamide synthetase phosphoribosylamine‑glycine ligase
RA	2,239,232	A→G	27.4%	T410T (ACT→ACC)	zraS ←	sensory histidine kinase in two‑component regulatory system with ZraR
RA	2,239,244	A→T	28.3%	D406E (GAT→GAA)	zraS ←	sensory histidine kinase in two‑component regulatory system with ZraR
RA	2,239,256	T→C	38.1%	A402A (GCA→GCG)	zraS ←	sensory histidine kinase in two‑component regulatory system with ZraR
RA	2,239,637	A→T	53.3%	P275P (CCT→CCA)	zraS ←	sensory histidine kinase in two‑component regulatory system with ZraR
RA	2,243,208	C→T	37.0%	V130V (GTG→GTA)	nfi ←	endonuclease V
RA	2,243,253	G→T	20.4%	V115V (GTC→GTA)	nfi ←	endonuclease V
RA	2,243,361	G→C	25.3%	S79S (TCC→TCG)	nfi ←	endonuclease V
RA	2,243,364	A→G	31.6%	L78L (CTT→CTC)	nfi ←	endonuclease V
RA	2,243,565	G→A	16.5%	I11I (ATC→ATT)	nfi ←	endonuclease V
RA	2,243,810	A→G	43.8%	L288L (TTG→CTG)	hemE ←	uroporphyrinogen decarboxylase
RA	2,243,829	A→G	47.1%	R281R (CGT→CGC)	hemE ←	uroporphyrinogen decarboxylase
RA	2,243,832	G→A	45.7%	R280R (CGC→CGT)	hemE ←	uroporphyrinogen decarboxylase
RA	2,243,898	G→C	46.1%	A258A (GCC→GCG)	hemE ←	uroporphyrinogen decarboxylase
RA	2,243,916	G→A	42.8%	G252G (GGC→GGT)	hemE ←	uroporphyrinogen decarboxylase
RA	2,243,925	G→A	38.0%	T249T (ACC→ACT)	hemE ←	uroporphyrinogen decarboxylase
RA	2,245,543	T→A	15.3%	intergenic (‑59/‑36)	nudC ← / → rsd	NADH pyrophosphatase/stationary phase protein, binds sigma 70 RNA polymerase subunit
RA	2,245,839	G→A	30.6%	A87A (GCG→GCA)	rsd →	stationary phase protein, binds sigma 70 RNA polymerase subunit
RA	2,245,860	G→A	26.9%	P94P (CCG→CCA)	rsd →	stationary phase protein, binds sigma 70 RNA polymerase subunit
RA	2,246,389	T→C	21.5%	Y34Y (TAT→TAC)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,246,455	T→C	36.6%	I56I (ATT→ATC)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,246,521	C→T	33.8%	G78G (GGC→GGT)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,246,530	T→C	29.3%	G81G (GGT→GGC)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,246,542	T→C	20.9%	I85I (ATT→ATC)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,246,725	T→C	49.2%	R146R (CGT→CGC)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,247,184	G→A	78.7%	A299A (GCG→GCA)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,247,196	T→G	80.5%	V303V (GTT→GTG)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,247,208	C→T	65.3%	A307A (GCC→GCT)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,247,796	T→C	51.0%	G503G (GGT→GGC)	thiC →	thiamin (pyrimidine moiety) biosynthesis protein
RA	2,248,786	T→C	27.7%	L202L (TTG→CTG)	thiE →	thiamin phosphate synthase
RA	2,250,566	C→T	54.5%	I16I (ATC→ATT)	thiH →	thiamin biosynthesis ThiGH complex subunit
RA	2,251,037	T→A	51.8%	L173L (CTT→CTA)	thiH →	thiamin biosynthesis ThiGH complex subunit
RA	2,251,646	A→G	28.1%	R376R (AGA→AGG)	thiH →	thiamin biosynthesis ThiGH complex subunit
RA	2,251,648	T→C	27.3%	L377P (CTA→CCA)	thiH →	thiamin biosynthesis ThiGH complex subunit
RA	2,251,656	G→A	25.5%	intergenic (+4/+406)	thiH → / ← htrC	thiamin biosynthesis ThiGH complex subunit/heat shock protein
RA	2,251,686	C→A	23.0%	intergenic (+34/+376)	thiH → / ← htrC	thiamin biosynthesis ThiGH complex subunit/heat shock protein
RA	2,251,690	A→C	22.6%	intergenic (+38/+372)	thiH → / ← htrC	thiamin biosynthesis ThiGH complex subunit/heat shock protein
RA	2,253,207	G→A	43.2%	G1277G (GGC→GGT)	rpoC ←	RNA polymerase, beta prime subunit
RA	2,253,228	A→G	29.3%	G1270G (GGT→GGC)	rpoC ←	RNA polymerase, beta prime subunit
RA	2,254,185	T→C	29.3%	Q951Q (CAA→CAG)	rpoC ←	RNA polymerase, beta prime subunit
RA	2,255,856	A→G	36.5%	I394I (ATT→ATC)	rpoC ←	RNA polymerase, beta prime subunit
RA	2,258,470	A→G	50.9%	G891G (GGT→GGC)	rpoB ←	RNA polymerase, beta subunit
RA	2,259,276	A→G	27.7%	L623L (TTG→CTG)	rpoB ←	RNA polymerase, beta subunit
RA	2,259,421	A→G	8.2%	S574S (TCT→TCC)	rpoB ←	RNA polymerase, beta subunit
RA	2,260,039	G→A	50.8%	R368R (CGC→CGT)	rpoB ←	RNA polymerase, beta subunit
RA	2,260,636	T→C	26.7%	K169K (AAA→AAG)	rpoB ←	RNA polymerase, beta subunit
RA	2,263,269	T→C	44.9%	Q80Q (CAA→CAG)	rplA ←	50S ribosomal subunit protein L1
RA	2,269,117	A→T	25.7%	P63P (CCT→CCA)	birA ←	bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding
RA	2,269,123	A→G	24.7%	P61P (CCT→CCC)	birA ←	bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding
RA	2,269,128	G→A	24.6%	L60L (CTG→TTG)	birA ←	bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding
RA	2,269,150	G→A	27.7%	T52T (ACC→ACT)	birA ←	bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding
RA	2,269,255	A→G	21.7%	G17G (GGT→GGC)	birA ←	bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding
RA	2,269,258	G→A	21.9%	N16N (AAC→AAT)	birA ←	bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding
RA	2,269,273	A→G	45.8%	I11I (ATT→ATC)	birA ←	bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding
RA	2,276,970	A→G	21.1%	Y593Y (TAT→TAC)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,216	G→A	26.8%	T511T (ACC→ACT)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,534	G→A	23.7%	F405F (TTC→TTT)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,555	T→C	26.2%	E398E (GAA→GAG)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,600	T→A	47.5%	S383S (TCA→TCT)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,603	G→A	42.6%	N382N (AAC→AAT)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,612	A→G	46.7%	S379S (AGT→AGC)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,619	G→C	23.8%	A377G (GCA→GGA)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,633	G→A	20.1%	T372T (ACC→ACT)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,277,651	T→C	17.4%	Q366Q (CAA→CAG)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,278,398	G→A	28.5%	S117S (AGC→AGT)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,278,404	G→A	33.7%	D115D (GAC→GAT)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,278,407	G→A	34.7%	A114A (GCC→GCT)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,278,430	G→A	39.7%	L107L (CTG→TTG)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,278,440	T→G	41.9%	V103V (GTA→GTC)	btuB ←	vitamin B12/cobalamin outer membrane transporter
RA	2,279,636	G→A	29.2%	V174I (GTC→ATC)	trmA →	tRNA (uracil‑5‑)‑methyltransferase
RA	2,279,641	A→G	28.3%	A175A (GCA→GCG)	trmA →	tRNA (uracil‑5‑)‑methyltransferase
RA	2,279,686	G→A	25.6%	Q190Q (CAG→CAA)	trmA →	tRNA (uracil‑5‑)‑methyltransferase
RA	2,280,578	C→T	48.6%	L13L (CTG→CTA)	yijD ←	conserved inner membrane protein
RA	2,281,039	G→A	31.1%	R94R (CGC→CGT)	fabR ←	DNA‑binding transcriptional repressor
RA	2,281,141	C→T	34.3%	A60A (GCG→GCA)	fabR ←	DNA‑binding transcriptional repressor
RA	2,281,147	A→T	36.0%	R58R (CGT→CGA)	fabR ←	DNA‑binding transcriptional repressor
RA	2,281,150	C→T	37.1%	A57A (GCG→GCA)	fabR ←	DNA‑binding transcriptional repressor
RA	2,281,337	A→G	36.2%	intergenic (‑17/‑260)	fabR ← / → sthA	DNA‑binding transcriptional repressor/pyridine nucleotide transhydrogenase, soluble
RA	2,282,340	T→C	35.1%	D248D (GAT→GAC)	sthA →	pyridine nucleotide transhydrogenase, soluble
RA	2,282,451	A→G	24.0%	L285L (CTA→CTG)	sthA →	pyridine nucleotide transhydrogenase, soluble
RA	2,282,463	C→T	24.8%	S289S (AGC→AGT)	sthA →	pyridine nucleotide transhydrogenase, soluble
RA	2,283,154	C→T	30.8%	E248E (GAG→GAA)	oxyR ←	DNA‑binding transcriptional dual regulator
RA	2,283,685	C→T	39.9%	V71V (GTG→GTA)	oxyR ←	DNA‑binding transcriptional dual regulator
RA	2,284,209	C→T	100%	Q443Q (CAG→CAA)	argH ←	argininosuccinate lyase
RA	2,284,434	G→A	43.5%	T368T (ACC→ACT)	argH ←	argininosuccinate lyase
RA	2,284,437	G→A	50.0%	A367A (GCC→GCT)	argH ←	argininosuccinate lyase
RA	2,284,647	G→A	75.2%	G297G (GGC→GGT)	argH ←	argininosuccinate lyase
RA	2,285,082	T→C	33.6%	P152P (CCA→CCG)	argH ←	argininosuccinate lyase
RA	2,285,088	T→C	32.9%	V150V (GTA→GTG)	argH ←	argininosuccinate lyase
RA	2,285,268	G→A	41.5%	G90G (GGC→GGT)	argH ←	argininosuccinate lyase
RA	2,286,015	A→G	37.3%	G119G (GGT→GGC)	argB ←	acetylglutamate kinase
RA	2,286,511	C→A	53.9%	G292G (GGG→GGT)	argC ←	N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding
RA	2,286,523	A→G	47.9%	F288F (TTT→TTC)	argC ←	N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding
RA	2,286,913	C→T	68.6%	A158A (GCG→GCA)	argC ←	N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding
RA	2,286,931	C→T	62.8%	P152P (CCG→CCA)	argC ←	N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding
RA	2,286,937	C→G	66.1%	A150A (GCG→GCC)	argC ←	N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding
RA	2,287,806	T→A	49.5%	G89G (GGT→GGA)	argE →	acetylornithine deacetylase
RA	2,287,824	G→A	40.9%	P95P (CCG→CCA)	argE →	acetylornithine deacetylase
RA	2,287,830	A→G	41.6%	T97T (ACA→ACG)	argE →	acetylornithine deacetylase
RA	2,287,831	C→T	41.6%	L98L (CTG→TTG)	argE →	acetylornithine deacetylase
RA	2,287,932	A→G	65.8%	K131K (AAA→AAG)	argE →	acetylornithine deacetylase
RA	2,290,461	C→G	38.3%	V391V (GTC→GTG)	ppc →	phosphoenolpyruvate carboxylase
RA	2,290,611	G→A	54.4%	L441L (CTG→CTA)	ppc →	phosphoenolpyruvate carboxylase
RA	2,290,614	G→A	54.6%	P442P (CCG→CCA)	ppc →	phosphoenolpyruvate carboxylase
RA	2,290,737	A→G	46.0%	V483V (GTA→GTG)	ppc →	phosphoenolpyruvate carboxylase
RA	2,290,935	A→C	20.0%	G549G (GGA→GGC)	ppc →	phosphoenolpyruvate carboxylase
RA	2,291,520	C→T	31.0%	D744D (GAC→GAT)	ppc →	phosphoenolpyruvate carboxylase
RA	2,292,688	A→T	58.2%	intergenic (+239/‑182)	fsaB → / → gldA	fructose‑6‑phosphate aldolase 2/glycerol dehydrogenase, NAD
RA	2,292,920	G→A	36.4%	V17V (GTG→GTA)	gldA →	glycerol dehydrogenase, NAD
RA	2,292,938	A→G	39.4%	E23E (GAA→GAG)	gldA →	glycerol dehydrogenase, NAD
RA	2,292,950	G→A	39.0%	P27P (CCG→CCA)	gldA →	glycerol dehydrogenase, NAD
RA	2,292,956	A→G	50.8%	A29A (GCA→GCG)	gldA →	glycerol dehydrogenase, NAD
RA	2,293,682	C→T	37.4%	H271H (CAC→CAT)	gldA →	glycerol dehydrogenase, NAD
RA	2,295,597	T→C	19.7%	T67T (ACA→ACG)	yijE ←	predicted permease
RA	2,296,088	C→T	48.0%	E661E (GAG→GAA)	katG ←	catalase/hydroperoxidase HPI(I)
RA	2,296,406	A→G	31.9%	G555G (GGT→GGC)	katG ←	catalase/hydroperoxidase HPI(I)
RA	2,298,204	T→G	52.1%	intergenic (‑134/+195)	katG ← / ← metF	catalase/hydroperoxidase HPI(I)/5,10‑methylenetetrahydrofolate reductase
RA	2,298,214	T→C	36.9%	intergenic (‑144/+185)	katG ← / ← metF	catalase/hydroperoxidase HPI(I)/5,10‑methylenetetrahydrofolate reductase
RA	2,298,218	T→A	36.6%	intergenic (‑148/+181)	katG ← / ← metF	catalase/hydroperoxidase HPI(I)/5,10‑methylenetetrahydrofolate reductase
RA	2,298,777	G→T	40.5%	R171R (CGC→CGA)	metF ←	5,10‑methylenetetrahydrofolate reductase
RA	2,298,781	T→C	40.5%	K170R (AAA→AGA)	metF ←	5,10‑methylenetetrahydrofolate reductase
RA	2,298,786	A→G	29.9%	N168N (AAT→AAC)	metF ←	5,10‑methylenetetrahydrofolate reductase
RA	2,298,789	A→G	29.9%	L167L (CTT→CTC)	metF ←	5,10‑methylenetetrahydrofolate reductase
RA	2,299,044	A→G	21.3%	G82G (GGT→GGC)	metF ←	5,10‑methylenetetrahydrofolate reductase
RA	2,299,047	A→G	21.0%	T81T (ACT→ACC)	metF ←	5,10‑methylenetetrahydrofolate reductase
RA	2,301,360	A→G	37.5%	S237S (AGT→AGC)	metL ←	fused aspartokinase II and homoserine dehydrogenase II
RA	2,301,363	G→A	47.0%	Y236Y (TAC→TAT)	metL ←	fused aspartokinase II and homoserine dehydrogenase II
RA	2,301,381	G→A	37.8%	S230S (AGC→AGT)	metL ←	fused aspartokinase II and homoserine dehydrogenase II
RA	2,301,387	G→A	43.0%	I228I (ATC→ATT)	metL ←	fused aspartokinase II and homoserine dehydrogenase II
RA	2,301,495	T→C	61.9%	G192G (GGA→GGG)	metL ←	fused aspartokinase II and homoserine dehydrogenase II
RA	2,301,534	C→T	100%	L179L (CTG→CTA)	metL ←	fused aspartokinase II and homoserine dehydrogenase II
RA	2,302,032	C→T	53.8%	Q13Q (CAG→CAA)	metL ←	fused aspartokinase II and homoserine dehydrogenase II
RA	2,302,610	G→T	55.0%	A208A (GCC→GCA)	metB ←	cystathionine gamma‑synthase, PLP‑dependent
RA	2,302,616	T→C	46.2%	V206V (GTA→GTG)	metB ←	cystathionine gamma‑synthase, PLP‑dependent
RA	2,302,622	T→A	43.1%	S204S (TCA→TCT)	metB ←	cystathionine gamma‑synthase, PLP‑dependent
RA	2,305,340	A→C	34.5%	L82L (CTA→CTC)	priA →	primosome factor n'
RA	2,305,466	C→T	48.0%	G124G (GGC→GGT)	priA →	primosome factor n'
RA	2,305,496	C→T	62.1%	R134R (CGC→CGT)	priA →	primosome factor n'
RA	2,306,411	T→C	19.9%	C439C (TGT→TGC)	priA →	primosome factor n'
RA	2,309,857	A→G	23.7%	A80A (GCA→GCG)	hslV →	peptidase component of the HslUV protease
RA	2,312,371	G→C	36.9%	R272R (CGG→CGC)	menA →	1,4‑dihydroxy‑2‑naphthoate octaprenyltransferase
RA	2,312,410	T→C	29.5%	R285R (CGT→CGC)	menA →	1,4‑dihydroxy‑2‑naphthoate octaprenyltransferase
RA	2,316,170	G→A	32.1%	A496A (GCG→GCA)	glpK →	glycerol kinase
RA	2,316,188	A→G	37.1%	E502E (GAA→GAG)	glpK →	glycerol kinase
RA	2,317,228	G→C	45.5%	A301A (GCG→GCC)	glpX →	fructose 1,6‑bisphosphatase II
RA	2,317,231	T→C	45.5%	T302T (ACT→ACC)	glpX →	fructose 1,6‑bisphosphatase II
RA	2,317,252	C→T	30.5%	R309R (CGC→CGT)	glpX →	fructose 1,6‑bisphosphatase II
RA	2,317,255	C→T	30.2%	G310G (GGC→GGT)	glpX →	fructose 1,6‑bisphosphatase II
RA	2,317,510	C→T	59.7%	A26A (GCC→GCT)	fpr →	ferredoxin‑NADP reductase
RA	2,317,540	T→C	57.2%	F36F (TTT→TTC)	fpr →	ferredoxin‑NADP reductase
RA	2,317,732	C→G	37.1%	L100L (CTC→CTG)	fpr →	ferredoxin‑NADP reductase
RA	2,317,741	G→A	32.7%	V103V (GTG→GTA)	fpr →	ferredoxin‑NADP reductase
RA	2,317,744	G→A	32.3%	P104P (CCG→CCA)	fpr →	ferredoxin‑NADP reductase
RA	2,317,745	C→G	32.4%	H105D (CAC→GAC) ‡	fpr →	ferredoxin‑NADP reductase
RA	2,317,747	C→T	35.8%	H105H (CAC→CAT) ‡	fpr →	ferredoxin‑NADP reductase
RA	2,317,828	T→A	36.3%	D132E (GAT→GAA)	fpr →	ferredoxin‑NADP reductase
RA	2,318,190	A→G	33.3%	D141D (GAT→GAC)	yiiT ←	stress‑induced protein
RA	2,318,208	G→C	33.1%	L135L (CTC→CTG) ‡	yiiT ←	stress‑induced protein
RA	2,318,210	G→A	33.0%	L135F (CTC→TTC) ‡	yiiT ←	stress‑induced protein
RA	2,318,211	C→G	33.1%	L134F (TTG→TTC) ‡	yiiT ←	stress‑induced protein
RA	2,318,213	A→G	33.0%	L134L (TTG→CTG) ‡	yiiT ←	stress‑induced protein
RA	2,318,225	T→A	25.0%	M130L (ATG→TTG)	yiiT ←	stress‑induced protein
RA	2,321,351	G→T	42.0%	R209S (CGC→AGC)	cdh ←	CDP‑diacylglycerol phosphotidylhydrolase
RA	2,321,376	T→C	34.6%	V200V (GTA→GTG)	cdh ←	CDP‑diacylglycerol phosphotidylhydrolase
RA	2,321,385	T→C	40.3%	A197A (GCA→GCG)	cdh ←	CDP‑diacylglycerol phosphotidylhydrolase
RA	2,322,183	G→A	69.6%	L297L (CTG→TTG)	sbp ←	sulfate transporter subunit
RA	2,322,184	C→T	69.6%	K296K (AAG→AAA)	sbp ←	sulfate transporter subunit
RA	2,322,829	C→A	48.4%	T81T (ACG→ACT)	sbp ←	sulfate transporter subunit
RA	2,323,123	A→G	13.3%	intergenic (‑52/+268)	sbp ← / ← pfkA	sulfate transporter subunit/6‑phosphofructokinase I
RA	2,323,249	G→A	57.4%	intergenic (‑178/+142)	sbp ← / ← pfkA	sulfate transporter subunit/6‑phosphofructokinase I
RA	2,323,251	G→A	57.4%	intergenic (‑180/+140)	sbp ← / ← pfkA	sulfate transporter subunit/6‑phosphofructokinase I
RA	2,323,502	A→G	60.8%	C284C (TGT→TGC)	pfkA ←	6‑phosphofructokinase I
RA	2,323,511	G→A	53.3%	G281G (GGC→GGT)	pfkA ←	6‑phosphofructokinase I
RA	2,323,532	A→C	49.4%	D274E (GAT→GAG)	pfkA ←	6‑phosphofructokinase I
RA	2,323,988	A→G	42.8%	G122G (GGT→GGC)	pfkA ←	6‑phosphofructokinase I
RA	2,325,765	A→T	27.1%	I107I (ATT→ATA)	cpxP ←	periplasmic protein combats stress
RA	2,326,771	A→G	36.3%	E179E (GAA→GAG)	cpxR →	DNA‑binding response regulator in two‑component regulatory system with CpxA
RA	2,330,847	G→A	100%	S83S (AGC→AGT)	sodA ←	superoxide dismutase, Mn
RA	2,330,865	G→A	100%	G77G (GGC→GGT)	sodA ←	superoxide dismutase, Mn
RA	2,330,874	G→A	71.9%	N74N (AAC→AAT)	sodA ←	superoxide dismutase, Mn
RA	2,331,109	A→G	47.8%	intergenic (‑14/+416)	sodA ← / ← fdhD	superoxide dismutase, Mn/formate dehydrogenase formation protein
RA	2,331,252	A→C	28.4%	intergenic (‑157/+273)	sodA ← / ← fdhD	superoxide dismutase, Mn/formate dehydrogenase formation protein
RA	2,331,283	A→G	38.9%	intergenic (‑188/+242)	sodA ← / ← fdhD	superoxide dismutase, Mn/formate dehydrogenase formation protein
RA	2,332,248	G→C	32.2%	V37V (GTC→GTG)	fdhD ←	formate dehydrogenase formation protein
RA	2,334,282	G→A	28.1%	K577K (AAG→AAA)	fdoG →	formate dehydrogenase‑O, large subunit
RA	2,334,291	C→G	30.6%	V580V (GTC→GTG)	fdoG →	formate dehydrogenase‑O, large subunit
RA	2,334,294	C→T	30.5%	T581T (ACC→ACT)	fdoG →	formate dehydrogenase‑O, large subunit
RA	2,335,299	G→A	49.3%	Q916Q (CAG→CAA)	fdoG →	formate dehydrogenase‑O, large subunit
RA	2,336,397	G→A	60.8%	A261A (GCG→GCA)	fdoH →	formate dehydrogenase‑O, Fe‑S subunit
RA	2,336,421	T→C	56.2%	F269F (TTT→TTC)	fdoH →	formate dehydrogenase‑O, Fe‑S subunit
RA	2,336,424	G→A	57.5%	A270A (GCG→GCA)	fdoH →	formate dehydrogenase‑O, Fe‑S subunit
RA	2,336,882	T→C	37.9%	V123V (GTT→GTC)	fdoI →	formate dehydrogenase‑O, cytochrome b556 subunit
RA	2,336,886	C→T	43.0%	L125L (CTG→TTG)	fdoI →	formate dehydrogenase‑O, cytochrome b556 subunit
RA	2,337,184	A→G	39.6%	S13S (TCA→TCG)	fdhE →	formate dehydrogenase formation protein
RA	2,337,772	G→T	29.8%	G209G (GGG→GGT)	fdhE →	formate dehydrogenase formation protein
RA	2,340,553	C→A	30.2%	intergenic (‑347/‑26)	bipA ← / → glnA	GTP‑binding protein/glutamine synthetase
RA	2,340,899	C→T	49.6%	S107S (TCC→TCT)	glnA →	glutamine synthetase
RA	2,340,914	C→T	25.6%	A112A (GCC→GCT)	glnA →	glutamine synthetase
RA	2,341,007	A→G	14.8%	S143S (TCA→TCG)	glnA →	glutamine synthetase
RA	2,341,463	G→A	33.6%	A295A (GCG→GCA)	glnA →	glutamine synthetase
RA	2,342,351	C→T	27.5%	N26N (AAC→AAT)	glnL →	sensory kinase in two‑component regulatory system with GlnG
RA	2,342,948	T→C	33.3%	D225D (GAT→GAC)	glnL →	sensory kinase in two‑component regulatory system with GlnG
RA	2,342,957	A→G	43.3%	L228L (CTA→CTG)	glnL →	sensory kinase in two‑component regulatory system with GlnG
RA	2,343,955	A→C	21.5%	S207S (TCA→TCC)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,343,967	C→T	26.8%	G211G (GGC→GGT)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,343,982	G→A	29.9%	A216A (GCG→GCA)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,343,988	T→C	31.0%	T218T (ACT→ACC)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,344,243	T→C	27.6%	V303V (GTT→GTC)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,344,609	G→A	65.4%	A425A (GCG→GCA)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,344,624	G→A	63.0%	E430E (GAG→GAA)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,344,639	G→C	82.0%	T435T (ACG→ACC)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,344,646	T→C	70.5%	L438L (TTG→CTG)	glnG →	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)
RA	2,349,443	C→A	45.7%	R735R (CGG→CGT)	polA ←	fused DNA polymerase I 5'‑>3' exonuclease, 3'‑>5' polymerase and 3'‑>5' exonuclease
RA	2,353,113	A→C	17.8%	F434L (TTT→TTG)	yihF ←	conserved hypothetical protein
RA	2,353,879	C→T	19.2%	G179D (GGT→GAT)	yihF ←	conserved hypothetical protein
RA	2,355,004	A→G	32.8%	N64N (AAT→AAC)	dsbA ←	periplasmic protein disulfide isomerase I
RA	2,356,630	C→T	22.3%	T6M (ACG→ATG)	mobA →	molybdopterin‑guanine dinucleotide synthase
RA	2,356,754	C→T	40.5%	L47L (CTC→CTT)	mobA →	molybdopterin‑guanine dinucleotide synthase
RA	2,359,222	C→G	35.1%	noncoding (1873/2905 nt)	rrlA ←	23S ribosomal RNA
RA	2,359,225	G→A	28.1%	noncoding (1870/2905 nt)	rrlA ←	23S ribosomal RNA
RA	2,359,227	G→C	35.9%	noncoding (1868/2905 nt)	rrlA ←	23S ribosomal RNA
RA	2,359,866	T→A	40.3%	noncoding (1229/2905 nt)	rrlA ←	23S ribosomal RNA
RA	2,359,867	G→C	44.0%	noncoding (1228/2905 nt)	rrlA ←	23S ribosomal RNA
RA	2,359,876	C→G	41.6%	noncoding (1219/2905 nt)	rrlA ←	23S ribosomal RNA
RA	2,359,877	A→C	39.1%	noncoding (1218/2905 nt)	rrlA ←	23S ribosomal RNA
RA	2,366,241	C→T	37.6%	K404K (AAG→AAA)	pepQ ←	proline dipeptidase
RA	2,366,274	T→A	43.7%	L393L (CTA→CTT)	pepQ ←	proline dipeptidase
RA	2,366,613	T→C	51.5%	E280E (GAA→GAG)	pepQ ←	proline dipeptidase
RA	2,366,622	A→T	47.6%	V277V (GTT→GTA)	pepQ ←	proline dipeptidase
RA	2,366,628	C→T	43.9%	K275K (AAG→AAA)	pepQ ←	proline dipeptidase
RA	2,366,640	C→T	43.3%	A271A (GCG→GCA)	pepQ ←	proline dipeptidase
RA	2,366,910	G→A	51.5%	H181H (CAC→CAT)	pepQ ←	proline dipeptidase
RA	2,367,123	C→T	31.8%	P110P (CCG→CCA)	pepQ ←	proline dipeptidase
RA	2,368,784	C→T	77.3%	I381I (ATC→ATT)	fadB →	fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase and 3‑hydroxyacyl‑CoA dehydrogenase
RA	2,368,808	A→G	63.9%	G389G (GGA→GGG)	fadB →	fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase and 3‑hydroxyacyl‑CoA dehydrogenase
RA	2,369,021	G→A	76.8%	L460L (TTG→TTA)	fadB →	fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase and 3‑hydroxyacyl‑CoA dehydrogenase
RA	2,369,345	C→T	41.0%	Y568Y (TAC→TAT)	fadB →	fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase and 3‑hydroxyacyl‑CoA dehydrogenase
RA	2,369,370	G→A	52.8%	D577N (GAT→AAT)	fadB →	fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase and 3‑hydroxyacyl‑CoA dehydrogenase
RA	2,377,653	G→A	20.7%	R245R (CGC→CGT)	ubiB ←	2‑octaprenylphenol hydroxylase
RA	2,378,139	T→C	41.9%	P83P (CCA→CCG)	ubiB ←	2‑octaprenylphenol hydroxylase
RA	2,384,433	G→A	62.4%	A376A (GCC→GCT)	metE ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase
RA	2,384,460	G→A	61.1%	D367D (GAC→GAT)	metE ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase
RA	2,384,474	G→A	64.1%	L363L (CTG→TTG)	metE ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase
RA	2,384,489	G→A	57.3%	L358L (CTG→TTG)	metE ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase
RA	2,385,126	G→C	30.9%	D145E (GAC→GAG)	metE ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase
RA	2,386,995	A→G	33.4%	F181F (TTT→TTC)	yigM ←	predicted inner membrane protein
RA	2,387,114	G→A	34.6%	L142L (CTG→TTG)	yigM ←	predicted inner membrane protein
RA	2,387,115	C→T	32.8%	L141L (TTG→TTA)	yigM ←	predicted inner membrane protein
RA	2,387,276	G→A	100%	L88L (CTG→TTG)	yigM ←	predicted inner membrane protein
RA	2,387,937	C→T	30.6%	P159P (CCG→CCA)	yigL ←	predicted hydrolase
RA	2,387,943	C→A	32.1%	L157L (CTG→CTT)	yigL ←	predicted hydrolase
RA	2,388,186	A→G	41.2%	N76N (AAT→AAC)	yigL ←	predicted hydrolase
RA	2,388,189	A→G	46.4%	G75G (GGT→GGC)	yigL ←	predicted hydrolase
RA	2,388,213	A→G	35.1%	G67G (GGT→GGC)	yigL ←	predicted hydrolase
RA	2,388,775	G→A	50.0%	R223R (CGC→CGT)	pldB ←	lysophospholipase L(2)
RA	2,388,901	G→A	34.9%	L181L (CTC→CTT)	pldB ←	lysophospholipase L(2)
RA	2,389,219	A→G	32.8%	Y75Y (TAT→TAC)	pldB ←	lysophospholipase L(2)
RA	2,390,458	G→A	26.1%	G133G (GGC→GGT)	rhtC ←	threonine efflux system
RA	2,390,479	C→A	28.2%	P126P (CCG→CCT)	rhtC ←	threonine efflux system
RA	2,390,482	A→G	28.8%	N125N (AAT→AAC)	rhtC ←	threonine efflux system
RA	2,390,485	A→C	29.2%	A124A (GCT→GCG)	rhtC ←	threonine efflux system
RA	2,390,896	A→C	41.1%	intergenic (‑40/+24)	rhtC ← / ← recQ	threonine efflux system/ATP‑dependent DNA helicase
RA	2,392,399	A→G	42.3%	R117R (CGT→CGC)	recQ ←	ATP‑dependent DNA helicase
RA	2,392,402	A→G	42.3%	I116I (ATT→ATC)	recQ ←	ATP‑dependent DNA helicase
RA	2,392,429	C→T	38.5%	V107V (GTG→GTA)	recQ ←	ATP‑dependent DNA helicase
RA	2,393,272	A→G	100%	Y160Y (TAT→TAC)	pldA ←	outer membrane phospholipase A
RA	2,393,275	C→G	100%	G159G (GGG→GGC)	pldA ←	outer membrane phospholipase A
RA	2,393,281	C→T	100%	E157E (GAG→GAA)	pldA ←	outer membrane phospholipase A
RA	2,394,275	T→C	100%	T120T (ACT→ACC)	yigI →	conserved hypothetical protein
RA	2,396,732	A→G	58.6%	Y152Y (TAT→TAC)	corA ←	magnesium/nickel/cobalt transporter
RA	2,397,994	C→T	34.0%	F146F (TTC→TTT)	yigE →	hypothetical protein
RA	2,399,890	A→G	47.4%	G247G (GGT→GGC)	uvrD ←	DNA‑dependent ATPase I and helicase II
RA	2,399,893	G→A	48.2%	V246V (GTC→GTT)	uvrD ←	DNA‑dependent ATPase I and helicase II
RA	2,399,911	G→A	55.1%	T240T (ACC→ACT)	uvrD ←	DNA‑dependent ATPase I and helicase II
RA	2,399,914	G→A	52.1%	D239D (GAC→GAT)	uvrD ←	DNA‑dependent ATPase I and helicase II
RA	2,400,903	G→A	50.5%	L176L (CTC→CTT)	yigB ←	predicted hydrolase
RA	2,400,915	A→C	51.7%	A172A (GCT→GCG)	yigB ←	predicted hydrolase
RA	2,401,943	A→G	31.2%	N128N (AAT→AAC)	xerC ←	site‑specific tyrosine recombinase
RA	2,402,395	T→C	40.8%	Q212Q (CAA→CAG)	yigA ←	conserved hypothetical protein
RA	2,402,524	T→C	47.5%	P169P (CCA→CCG)	yigA ←	conserved hypothetical protein
RA	2,403,432	A→G	63.6%	I140I (ATT→ATC)	dapF ←	diaminopimelate epimerase
RA	2,403,448	G→A	52.6%	A135V (GCG→GTG)	dapF ←	diaminopimelate epimerase
RA	2,404,592	C→G	45.0%	E58Q (GAG→CAG)  L13L (CTC→CTG)	yzcX ← cyaY →	hypothetical protein frataxin, iron‑binding and oxidizing protein
RA	2,404,986	T→G	25.2%	T825T (ACA→ACC)	cyaA ←	adenylate cyclase
RA	2,404,992	G→A	26.9%	F823F (TTC→TTT)	cyaA ←	adenylate cyclase
RA	2,405,511	A→G	39.2%	I650I (ATT→ATC)	cyaA ←	adenylate cyclase
RA	2,405,535	A→G	37.7%	Y642Y (TAT→TAC)	cyaA ←	adenylate cyclase
RA	2,405,538	A→G	37.7%	C641C (TGT→TGC)	cyaA ←	adenylate cyclase
RA	2,406,099	C→T	26.5%	V454V (GTG→GTA)	cyaA ←	adenylate cyclase
RA	2,407,197	C→T	38.9%	P88P (CCG→CCA)	cyaA ←	adenylate cyclase
RA	2,407,200	A→G	37.9%	D87D (GAT→GAC)	cyaA ←	adenylate cyclase
RA	2,408,020	A→G	35.5%	G58G (GGA→GGG)	hemC →	hydroxymethylbilane synthase
RA	2,408,035	A→G	32.7%	V63V (GTA→GTG)	hemC →	hydroxymethylbilane synthase
RA	2,409,214	A→T	35.8%	T144S (ACC→TCC)	hemD →	uroporphyrinogen III synthase
RA	2,409,828	T→C	57.2%	I94I (ATT→ATC)	hemX →	uroporphyrinogen III methylase
RA	2,409,850	A→G	43.4%	K102E (AAG→GAG)	hemX →	uroporphyrinogen III methylase
RA	2,410,191	C→T	28.5%	N215N (AAC→AAT)	hemX →	uroporphyrinogen III methylase
RA	2,411,465	C→T	25.9%	S245S (AGC→AGT)	hemY →	predicted protoheme IX synthesis protein
RA	2,412,631	G→T	27.8%	R9L (CGT→CTT)	aslA →	acrylsulfatase‑like enzyme
RA	2,412,668	G→A	31.8%	M21I (ATG→ATA)	aslA →	acrylsulfatase‑like enzyme
RA	2,413,154	T→C	100%	T183T (ACT→ACC)	aslA →	acrylsulfatase‑like enzyme
RA	2,413,160	C→T	100%	A185A (GCC→GCT)	aslA →	acrylsulfatase‑like enzyme
RA	2,413,166	A→G	100%	G187G (GGA→GGG)	aslA →	acrylsulfatase‑like enzyme
RA	2,413,415	T→C	30.7%	D270D (GAT→GAC)	aslA →	acrylsulfatase‑like enzyme
RA	2,413,436	C→A	23.2%	D277E (GAC→GAA)	aslA →	acrylsulfatase‑like enzyme
RA	2,416,365	C→A	43.8%	G454G (GGG→GGT)	yifK ←	predicted transporter
RA	2,416,428	A→G	40.5%	V433V (GTT→GTC)	yifK ←	predicted transporter
RA	2,417,935	G→A	35.2%	H241H (CAC→CAT)	rffM ←	UDP‑N‑acetyl‑D‑mannosaminuronic acid transferase
RA	2,418,505	A→G	22.0%	T51T (ACT→ACC)	rffM ←	UDP‑N‑acetyl‑D‑mannosaminuronic acid transferase
RA	2,418,565	A→G	50.0%	F31F (TTT→TTC)	rffM ←	UDP‑N‑acetyl‑D‑mannosaminuronic acid transferase
RA	2,418,583	G→A	65.7%	H25H (CAC→CAT)	rffM ←	UDP‑N‑acetyl‑D‑mannosaminuronic acid transferase
RA	2,418,849	A→G	38.6%	F388F (TTT→TTC)	wzyE ←	predicted Wzy protein involved in ECA polysaccharide chain elongation
RA	2,418,876	T→C	24.2%	K379K (AAA→AAG)	wzyE ←	predicted Wzy protein involved in ECA polysaccharide chain elongation
RA	2,418,890	G→T	47.2%	P375T (CCT→ACT)	wzyE ←	predicted Wzy protein involved in ECA polysaccharide chain elongation
RA	2,419,494	G→A	40.3%	Y173Y (TAC→TAT)	wzyE ←	predicted Wzy protein involved in ECA polysaccharide chain elongation
RA	2,419,497	G→A	40.9%	V172V (GTC→GTT)	wzyE ←	predicted Wzy protein involved in ECA polysaccharide chain elongation
RA	2,419,779	C→T	30.0%	A78A (GCG→GCA)	wzyE ←	predicted Wzy protein involved in ECA polysaccharide chain elongation
RA	2,420,823	G→T	34.7%	T89K (ACA→AAA)	rffT ←	TDP‑Fuc4NAc:lipidII transferase
RA	2,420,852	A→T	54.5%	R79R (CGT→CGA)	rffT ←	TDP‑Fuc4NAc:lipidII transferase
RA	2,422,099	C→T	19.3%	V79V (GTG→GTA)	wzxE ←	O‑antigen translocase
RA	2,423,039	T→C	30.2%	K143K (AAA→AAG)	rffA ←	TDP‑4‑oxo‑6‑deoxy‑D‑glucose transaminase
RA	2,423,180	A→G	31.2%	V96V (GTT→GTC)	rffA ←	TDP‑4‑oxo‑6‑deoxy‑D‑glucose transaminase
RA	2,423,908	G→A	25.1%	A37V (GCC→GTC)	rffC ←	TDP‑fucosamine acetyltransferase
RA	2,425,192	A→G	54.3%	R300R (CGT→CGC)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,425,195	C→T	46.2%	L299L (CTG→CTA)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,425,198	A→G	47.3%	D298D (GAT→GAC)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,425,207	C→T	39.3%	P295P (CCG→CCA)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,425,234	G→A	27.6%	D286D (GAC→GAT)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,425,237	A→G	25.9%	R285R (CGT→CGC)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,426,748	G→T	53.7%	V202V (GTC→GTA)	rffD ←	UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase
RA	2,428,430	C→T	35.8%	A17A (GCG→GCA)	rffE ←	UDP‑N‑acetyl glucosamine‑2‑epimerase
RA	2,431,447	G→C	49.3%	A250A (GCC→GCG)	rho ←	transcription termination factor
RA	2,433,207	T→C	35.3%	P75P (CCT→CCC)	rhlB →	ATP‑dependent RNA helicase
RA	2,434,314	A→C	37.6%	intergenic (+66/‑70)	rhlB → / → gpp	ATP‑dependent RNA helicase/guanosine pentaphosphatase/exopolyphosphatase
RA	2,434,324	A→C	39.9%	intergenic (+76/‑60)	rhlB → / → gpp	ATP‑dependent RNA helicase/guanosine pentaphosphatase/exopolyphosphatase
RA	2,434,343	A→G	38.8%	intergenic (+95/‑41)	rhlB → / → gpp	ATP‑dependent RNA helicase/guanosine pentaphosphatase/exopolyphosphatase
RA	2,434,641	G→A	39.7%	T86T (ACG→ACA)	gpp →	guanosine pentaphosphatase/exopolyphosphatase
RA	2,435,202	C→A	40.6%	I273I (ATC→ATA)	gpp →	guanosine pentaphosphatase/exopolyphosphatase
RA	2,439,549	C→T	44.8%	V365V (GTG→GTA)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,439,558	A→G	60.5%	I362I (ATT→ATC)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,439,591	C→T	75.1%	E351E (GAG→GAA)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,439,594	G→A	73.4%	G350G (GGC→GGT)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,439,852	T→C	18.4%	A264A (GCA→GCG)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,439,903	T→C	25.4%	P247P (CCA→CCG)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,440,065	G→T	48.3%	A193A (GCC→GCA)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,440,071	G→A	51.3%	A191A (GCC→GCT)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,440,074	A→G	50.9%	I190I (ATT→ATC)	ilvC ←	ketol‑acid reductoisomerase, NAD(P)‑binding
RA	2,440,779	C→T	41.1%	intergenic (‑136/‑14)	ilvC ← / → ilvY	ketol‑acid reductoisomerase, NAD(P)‑binding/DNA‑binding transcriptional dual regulator
RA	2,440,780	G→A	41.6%	intergenic (‑137/‑13)	ilvC ← / → ilvY	ketol‑acid reductoisomerase, NAD(P)‑binding/DNA‑binding transcriptional dual regulator
RA	2,440,788	T→C	40.0%	intergenic (‑145/‑5)	ilvC ← / → ilvY	ketol‑acid reductoisomerase, NAD(P)‑binding/DNA‑binding transcriptional dual regulator
RA	2,440,789	C→G	44.4%	intergenic (‑146/‑4)	ilvC ← / → ilvY	ketol‑acid reductoisomerase, NAD(P)‑binding/DNA‑binding transcriptional dual regulator
RA	2,440,792	T→A	43.7%	intergenic (‑149/‑1)	ilvC ← / → ilvY	ketol‑acid reductoisomerase, NAD(P)‑binding/DNA‑binding transcriptional dual regulator
RA	2,440,793	G→T	43.7%	V1M (GTG→TTG) †	ilvY →	DNA‑binding transcriptional dual regulator
RA	2,441,545	C→G	40.7%	P251P (CCC→CCG)	ilvY →	DNA‑binding transcriptional dual regulator
RA	2,441,954	T→C	22.6%	S443S (TCA→TCG)	ilvA ←	threonine deaminase
RA	2,443,474	A→T	49.1%	R554R (CGT→CGA)	ilvD ←	dihydroxyacid dehydratase
RA	2,443,483	G→A	51.9%	I551I (ATC→ATT)	ilvD ←	dihydroxyacid dehydratase
RA	2,443,486	G→A	61.4%	D550D (GAC→GAT)	ilvD ←	dihydroxyacid dehydratase
RA	2,444,281	C→T	23.5%	L285L (CTG→CTA)	ilvD ←	dihydroxyacid dehydratase
RA	2,444,290	T→A	23.3%	V282V (GTA→GTT)	ilvD ←	dihydroxyacid dehydratase
RA	2,444,536	G→A	47.1%	T200T (ACC→ACT)	ilvD ←	dihydroxyacid dehydratase
RA	2,444,608	T→A	40.0%	V176V (GTA→GTT)	ilvD ←	dihydroxyacid dehydratase
RA	2,447,222	G→A	54.2%	pseudogene (834/1647 nt)	ilvG ←	Mutation in protein compared to W3110: p.Glu327_Ilefs*223 Restoration of IlvG found in MG1655 (548 amino acids), fusion of N‑ter and C‑ter fragments ECK3760:JW3740+JW3741:b4488; large subunit of acetolactate synthase II
RA	2,447,246	A→G	42.7%	pseudogene (810/1647 nt)	ilvG ←	Mutation in protein compared to W3110: p.Glu327_Ilefs*223 Restoration of IlvG found in MG1655 (548 amino acids), fusion of N‑ter and C‑ter fragments ECK3760:JW3740+JW3741:b4488; large subunit of acetolactate synthase II
RA	2,447,261	C→T	50.6%	pseudogene (795/1647 nt)	ilvG ←	Mutation in protein compared to W3110: p.Glu327_Ilefs*223 Restoration of IlvG found in MG1655 (548 amino acids), fusion of N‑ter and C‑ter fragments ECK3760:JW3740+JW3741:b4488; large subunit of acetolactate synthase II
RA	2,447,263	A→G	48.1%	pseudogene (793/1647 nt)	ilvG ←	Mutation in protein compared to W3110: p.Glu327_Ilefs*223 Restoration of IlvG found in MG1655 (548 amino acids), fusion of N‑ter and C‑ter fragments ECK3760:JW3740+JW3741:b4488; large subunit of acetolactate synthase II
RA	2,447,264	G→A	48.1%	pseudogene (792/1647 nt)	ilvG ←	Mutation in protein compared to W3110: p.Glu327_Ilefs*223 Restoration of IlvG found in MG1655 (548 amino acids), fusion of N‑ter and C‑ter fragments ECK3760:JW3740+JW3741:b4488; large subunit of acetolactate synthase II
RA	2,447,486	G→A	58.7%	pseudogene (570/1647 nt)	ilvG ←	Mutation in protein compared to W3110: p.Glu327_Ilefs*223 Restoration of IlvG found in MG1655 (548 amino acids), fusion of N‑ter and C‑ter fragments ECK3760:JW3740+JW3741:b4488; large subunit of acetolactate synthase II
RA	2,447,498	A→G	57.6%	pseudogene (558/1647 nt)	ilvG ←	Mutation in protein compared to W3110: p.Glu327_Ilefs*223 Restoration of IlvG found in MG1655 (548 amino acids), fusion of N‑ter and C‑ter fragments ECK3760:JW3740+JW3741:b4488; large subunit of acetolactate synthase II
RA	2,449,128	A→G	51.2%	Q171Q (CAA→CAG)	yifB →	predicted bifunctional protein, enzyme and transcriptional regulator
RA	2,449,137	T→C	54.4%	C174C (TGT→TGC)	yifB →	predicted bifunctional protein, enzyme and transcriptional regulator
RA	2,449,169	G→A	29.3%	R185H (CGC→CAC)	yifB →	predicted bifunctional protein, enzyme and transcriptional regulator
RA	2,449,183	G→A	14.1%	D190N (GAT→AAT)	yifB →	predicted bifunctional protein, enzyme and transcriptional regulator
RA	2,449,225	A→G	19.6%	I204V (ATC→GTC)	yifB →	predicted bifunctional protein, enzyme and transcriptional regulator
RA	2,449,236	A→G	17.4%	E207E (GAA→GAG)	yifB →	predicted bifunctional protein, enzyme and transcriptional regulator
RA	2,451,169	A→T	53.0%	S174S (TCA→TCT)	hdfR →	DNA‑binding transcriptional regulator
RA	2,451,190	T→C	47.2%	N181N (AAT→AAC)	hdfR →	DNA‑binding transcriptional regulator
RA	2,451,340	C→T	37.5%	S231S (AGC→AGT)	hdfR →	DNA‑binding transcriptional regulator
RA	2,451,346	G→A	27.5%	A233A (GCG→GCA)	hdfR →	DNA‑binding transcriptional regulator
RA	2,457,681	A→G	30.3%	K131K (AAA→AAG)	yieP →	predicted transcriptional regulator
RA	2,458,264	A→G	35.1%	T87T (ACA→ACG)	hsrA →	predicted multidrug or homocysteine efflux system
RA	2,459,646	C→T	15.8%	L86L (CTG→TTG)	asnC →	DNA‑binding transcriptional dual regulator
RA	2,459,805	T→C	45.0%	L139L (TTG→CTG)	asnC →	DNA‑binding transcriptional dual regulator
RA	2,460,061	A→G	45.7%	L41L (TTA→TTG)	mioC →	FMN‑binding protein MioC
RA	2,460,071	C→T	43.5%	P45S (CCT→TCT)	mioC →	FMN‑binding protein MioC
RA	2,460,079	A→G	37.6%	S47S (TCA→TCG)	mioC →	FMN‑binding protein MioC
RA	2,461,663	A→G	50.0%	G301G (GGA→GGG)	gidA →	glucose‑inhibited cell‑division protein
RA	2,461,675	T→C	57.0%	N305N (AAT→AAC)	gidA →	glucose‑inhibited cell‑division protein
RA	2,461,741	T→C	100%	S327S (TCT→TCC)	gidA →	glucose‑inhibited cell‑division protein
RA	2,461,810	T→A	100%	P350P (CCT→CCA)	gidA →	glucose‑inhibited cell‑division protein
RA	2,463,067	A→G	31.7%	E118E (GAA→GAG)	gidB →	methyltransferase, glucose‑inhibited cell‑division protein
RA	2,464,528	C→T	37.4%	S62S (AGC→AGT)	atpB →	F0 sector of membrane‑bound ATP synthase, subunit a
RA	2,464,543	G→A	66.0%	A67A (GCG→GCA)	atpB →	F0 sector of membrane‑bound ATP synthase, subunit a
RA	2,464,552	T→C	100%	G70G (GGT→GGC)	atpB →	F0 sector of membrane‑bound ATP synthase, subunit a
RA	2,464,777	G→T	53.2%	A145A (GCG→GCT)	atpB →	F0 sector of membrane‑bound ATP synthase, subunit a
RA	2,467,055	A→C	47.3%	T173T (ACA→ACC)	atpA →	F1 sector of membrane‑bound ATP synthase, alpha subunit
RA	2,469,732	T→A	56.6%	V238V (GTT→GTA)	atpD →	F1 sector of membrane‑bound ATP synthase, beta subunit
RA	2,469,733	C→T	52.0%	L239L (CTG→TTG)	atpD →	F1 sector of membrane‑bound ATP synthase, beta subunit
RA	2,469,744	T→C	51.5%	V242V (GTT→GTC)	atpD →	F1 sector of membrane‑bound ATP synthase, beta subunit
RA	2,469,747	C→T	61.2%	D243D (GAC→GAT)	atpD →	F1 sector of membrane‑bound ATP synthase, beta subunit
RA	2,472,750	G→A	8.7%	A9T (GCG→ACG)	glmS →	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase
RA	2,472,815	C→T	17.2%	D30D (GAC→GAT)	glmS →	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase
RA	2,473,223	C→T	39.3%	H166H (CAC→CAT)	glmS →	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase
RA	2,473,322	G→A	42.1%	P199P (CCG→CCA)	glmS →	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase
RA	2,474,447	G→A	31.9%	P574P (CCG→CCA)	glmS →	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase
RA	2,474,471	G→A	31.9%	Q582Q (CAG→CAA)	glmS →	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase
RA	2,474,474	G→A	31.9%	L583L (CTG→CTA)	glmS →	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase
RA	2,474,925	T→C	57.9%	S19S (AGT→AGC)	pstS →	phosphate transporter subunit
RA	2,475,514	A→G	18.2%	I216V (ATT→GTT)	pstS →	phosphate transporter subunit
RA	2,475,522	T→C	21.3%	Y218Y (TAT→TAC)	pstS →	phosphate transporter subunit
RA	2,475,894	T→C	38.6%	G342G (GGT→GGC)	pstS →	phosphate transporter subunit
RA	2,476,277	C→T	20.8%	F94F (TTC→TTT)	pstC →	phosphate transporter subunit
RA	2,476,553	G→A	32.9%	A186A (GCG→GCA)	pstC →	phosphate transporter subunit
RA	2,478,336	T→C	31.5%	F103F (TTT→TTC)	pstB →	phosphate transporter subunit
RA	2,478,339	G→A	31.2%	P104P (CCG→CCA)	pstB →	phosphate transporter subunit
RA	2,479,154	G→A	23.8%	A113A (GCG→GCA)	phoU →	DNA‑binding transcriptional regulator
RA	2,479,184	G→A	27.3%	P123P (CCG→CCA)	phoU →	DNA‑binding transcriptional regulator
RA	2,479,644	T→C	25.2%	intergenic (+103/+204)	phoU → / ← yieE	DNA‑binding transcriptional regulator/predicted phosphopantetheinyl transferase
RA	2,479,651	C→A	30.0%	intergenic (+110/+197)	phoU → / ← yieE	DNA‑binding transcriptional regulator/predicted phosphopantetheinyl transferase
RA	2,479,657	C→A	36.7%	intergenic (+116/+191)	phoU → / ← yieE	DNA‑binding transcriptional regulator/predicted phosphopantetheinyl transferase
RA	2,480,719	T→C	35.3%	intergenic (‑110/+35)	yieE ← / ← yidZ	predicted phosphopantetheinyl transferase/predicted DNA‑binding transcriptional regulator
RA	2,480,838	C→A	18.8%	L292L (CTG→CTT)	yidZ ←	predicted DNA‑binding transcriptional regulator
RA	2,481,036	T→C	37.1%	G226G (GGA→GGG)	yidZ ←	predicted DNA‑binding transcriptional regulator
RA	2,481,132	C→T	27.4%	T194T (ACG→ACA) ‡	yidZ ←	predicted DNA‑binding transcriptional regulator
RA	2,481,134	T→C	27.5%	T194A (ACG→GCG) ‡	yidZ ←	predicted DNA‑binding transcriptional regulator
RA	2,481,137	G→C	25.1%	Q193E (CAA→GAA)	yidZ ←	predicted DNA‑binding transcriptional regulator
RA	2,482,012	A→G	35.2%	T284T (ACT→ACC)	mdtL ←	multidrug efflux system protein
RA	2,482,042	C→T	31.5%	S274S (TCG→TCA)	mdtL ←	multidrug efflux system protein
RA	2,482,186	C→T	49.0%	P226P (CCG→CCA)	mdtL ←	multidrug efflux system protein
RA	2,482,189	T→C	45.5%	S225S (TCA→TCG)	mdtL ←	multidrug efflux system protein
RA	2,482,204	A→G	52.1%	T220T (ACT→ACC)	mdtL ←	multidrug efflux system protein
RA	2,482,270	C→T	27.4%	S198S (TCG→TCA)	mdtL ←	multidrug efflux system protein
RA	2,483,170	C→T	21.1%	L442L (CTG→CTA)	trmE ←	GTPase
RA	2,483,563	C→A	64.3%	V311V (GTG→GTT)	trmE ←	GTPase
RA	2,483,575	T→C	69.3%	T307T (ACA→ACG)	trmE ←	GTPase
RA	2,483,746	A→G	50.0%	T250T (ACT→ACC)	trmE ←	GTPase
RA	2,484,871	C→A	46.4%	S459S (TCG→TCT)	yidC ←	cytoplasmic insertase into membrane protein, Sec system
RA	2,485,588	G→A	37.6%	G220G (GGC→GGT)	yidC ←	cytoplasmic insertase into membrane protein, Sec system
RA	2,485,672	C→G	17.7%	S192S (TCG→TCC) ‡	yidC ←	cytoplasmic insertase into membrane protein, Sec system
RA	2,485,674	A→T	17.5%	S192T (TCG→ACG) ‡	yidC ←	cytoplasmic insertase into membrane protein, Sec system
RA	2,489,400	A→G	53.7%	A133A (GCA→GCG)	dnaN →	DNA polymerase III, beta subunit
RA	2,489,649	A→G	19.5%	V216V (GTA→GTG)	dnaN →	DNA polymerase III, beta subunit
RA	2,489,703	C→G	26.6%	S234S (TCC→TCG)	dnaN →	DNA polymerase III, beta subunit
RA	2,492,469	G→T	100%	L422L (CTG→CTT)	gyrB →	DNA gyrase, subunit B
RA	2,492,925	A→G	25.7%	A574A (GCA→GCG)	gyrB →	DNA gyrase, subunit B
RA	2,492,926	T→C	25.7%	L575L (TTG→CTG)	gyrB →	DNA gyrase, subunit B
RA	2,492,955	A→G	18.9%	V584V (GTA→GTG)	gyrB →	DNA gyrase, subunit B
RA	2,494,331	A→G	100%	V113V (GTA→GTG)	ibpA →	heat shock chaperone
RA	2,494,338	T→C	100%	L116L (TTG→CTG)	ibpA →	heat shock chaperone
RA	2,494,791	C→T	34.5%	P92S (CCA→TCA) ‡	ibpB →	heat shock chaperone
RA	2,494,793	A→T	29.9%	P92P (CCA→CCT) ‡	ibpB →	heat shock chaperone
RA	2,495,796	G→A	48.0%	T176T (ACC→ACT)	emrD ←	multidrug efflux system protein
RA	2,495,805	A→G	46.7%	A173A (GCT→GCC)	emrD ←	multidrug efflux system protein
RA	2,496,207	G→A	45.2%	N39N (AAC→AAT)	emrD ←	multidrug efflux system protein
RA	2,497,255	C→T	44.2%	intergenic (‑932/‑2)	emrD ← / → ivbL	multidrug efflux system protein/ilvB operon leader peptide
RA	2,497,272	C→T	42.4%	L6F (CTC→TTC)	ivbL →	ilvB operon leader peptide
RA	2,498,633	T→G	34.3%	V391V (GTT→GTG)	ilvB →	acetolactate synthase I, large subunit
RA	2,498,663	T→C	42.6%	A401A (GCT→GCC)	ilvB →	acetolactate synthase I, large subunit
RA	2,499,173	C→T	60.8%	D7D (GAC→GAT)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,179	A→G	64.0%	V9V (GTA→GTG)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,188	G→A	52.5%	E12E (GAG→GAA)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,275	T→C	100%	C41C (TGT→TGC)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,305	T→C	60.4%	H51H (CAT→CAC)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,356	A→G	32.8%	Q68Q (CAA→CAG)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,359	C→A	33.7%	I69I (ATC→ATA)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,362	T→C	33.7%	D70D (GAT→GAC)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,377	C→G	37.7%	V75V (GTC→GTG)	ilvN →	acetolactate synthase I, small subunit
RA	2,499,803	A→G	28.5%	A95A (GCA→GCG)	uhpA →	DNA‑binding response regulator in two‑component regulatory system wtih UhpB
RA	2,499,815	T→C	34.2%	L99L (CTT→CTC)	uhpA →	DNA‑binding response regulator in two‑component regulatory system wtih UhpB
RA	2,503,335	C→T	18.9%	S86S (TCC→TCT)	uhpT →	hexose phosphate transporter
RA	2,503,875	C→T	23.0%	F266F (TTC→TTT)	uhpT →	hexose phosphate transporter
RA	2,503,899	A→G	46.7%	V274V (GTA→GTG)	uhpT →	hexose phosphate transporter
RA	2,503,968	G→A	50.0%	A297A (GCG→GCA)	uhpT →	hexose phosphate transporter
RA	2,505,679	T→A	54.5%	G45G (GGT→GGA)	yicJ →	predicted transporter
RA	2,505,784	T→G	45.1%	R80R (CGT→CGG)	yicJ →	predicted transporter
RA	2,505,793	A→G	45.0%	V83V (GTA→GTG)	yicJ →	predicted transporter
RA	2,505,865	C→A	8.6%	G107G (GGC→GGA)	yicJ →	predicted transporter
RA	2,505,874	C→T	11.2%	I110I (ATC→ATT)	yicJ →	predicted transporter
RA	2,506,486	C→T	32.4%	P314P (CCC→CCT)	yicJ →	predicted transporter
RA	2,507,099	T→C	28.5%	L55L (TTG→CTG)	yicI →	predicted alpha‑glucosidase
RA	2,507,263	C→T	32.2%	S109S (AGC→AGT)	yicI →	predicted alpha‑glucosidase
RA	2,507,377	C→A	16.3%	R147R (CGC→CGA)	yicI →	predicted alpha‑glucosidase
RA	2,507,398	T→G	22.4%	L154L (CTT→CTG)	yicI →	predicted alpha‑glucosidase
RA	2,508,933	A→G	55.1%	N666S (AAC→AGC)	yicI →	predicted alpha‑glucosidase
RA	2,508,937	T→C	52.0%	T667T (ACT→ACC)	yicI →	predicted alpha‑glucosidase
RA	2,508,978	T→C	24.7%	V681A (GTG→GCG)	yicI →	predicted alpha‑glucosidase
RA	2,508,991	C→T	22.7%	G685G (GGC→GGT)	yicI →	predicted alpha‑glucosidase
RA	2,509,118	G→A	74.4%	A728T (GCG→ACG)	yicI →	predicted alpha‑glucosidase
RA	2,509,148	C→T	66.3%	L738L (CTG→TTG)	yicI →	predicted alpha‑glucosidase
RA	2,509,560	T→G	18.8%	T486T (ACA→ACC)	yicH ←	conserved hypothetical protein
RA	2,509,926	C→T	51.1%	P364P (CCG→CCA)	yicH ←	conserved hypothetical protein
RA	2,512,485	C→T	60.5%	A15A (GCG→GCA)	yicE ←	predicted transporter
RA	2,514,597	G→A	41.3%	G556G (GGC→GGT)	recG ←	ATP‑dependent DNA helicase
RA	2,514,636	C→T	54.3%	E543E (GAG→GAA)	recG ←	ATP‑dependent DNA helicase
RA	2,515,737	G→T	42.8%	T176T (ACC→ACA)	recG ←	ATP‑dependent DNA helicase
RA	2,517,413	G→A	54.0%	S554S (AGC→AGT)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,517,491	T→G	67.9%	G528G (GGA→GGC)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,517,725	G→A	64.3%	G450G (GGC→GGT)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,517,731	A→T	64.4%	A448A (GCT→GCA)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,517,761	G→A	61.4%	T438T (ACC→ACT)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,517,962	A→G	33.9%	S371S (AGT→AGC)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,518,142	G→A	41.0%	I311I (ATC→ATT)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,518,676	G→A	61.0%	I133I (ATC→ATT)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,518,697	C→A	26.3%	M126I (ATG→ATT)	spoT ←	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	2,520,256	C→T	28.3%	intergenic (‑210/‑48)	gmk ← / → ligB	guanylate kinase/DNA ligase, NAD(+)‑dependent
RA	2,520,257	T→C	28.4%	intergenic (‑211/‑47)	gmk ← / → ligB	guanylate kinase/DNA ligase, NAD(+)‑dependent
RA	2,522,082	T→C	65.2%	V173V (GTA→GTG)	yicG ←	conserved inner membrane protein
RA	2,522,085	C→A	66.1%	V172V (GTG→GTT)	yicG ←	conserved inner membrane protein
RA	2,522,265	C→T	36.9%	G112G (GGG→GGA)	yicG ←	conserved inner membrane protein
RA	2,522,289	C→G	23.6%	G104G (GGG→GGC)	yicG ←	conserved inner membrane protein
RA	2,522,857	G→A	22.6%	intergenic (‑257/+33)	yicG ← / ← dinD	conserved inner membrane protein/DNA‑damage‑inducible protein
RA	2,524,241	G→T	39.3%	V186V (GTC→GTA) ‡	yicC ←	conserved hypothetical protein
RA	2,524,243	C→T	37.6%	V186I (GTC→ATC) ‡	yicC ←	conserved hypothetical protein
RA	2,524,331	G→A	66.7%	I156I (ATC→ATT)	yicC ←	conserved hypothetical protein
RA	2,524,337	T→C	65.0%	A154A (GCA→GCG) ‡	yicC ←	conserved hypothetical protein
RA	2,524,338	G→A	65.0%	A154V (GCA→GTA) ‡	yicC ←	conserved hypothetical protein
RA	2,525,308	G→T	65.1%	pseudogene (384/688 nt)	rph →	Mutation in protein compared to W3110: p.Val138Ala; p.Val172Ile; p.Ile216Thr; p.Glu224_Glyfs*16 ECK3633:JW3618:b3643; ribonuclease PH
RA	2,525,940	G→C	54.2%	A78A (GCG→GCC)	pyrE →	orotate phosphoribosyltransferase
RA	2,526,697	A→G	48.2%	L95L (CTT→CTC)	ttk ←	division inhibitor
RA	2,526,702	G→A	48.5%	L94L (CTG→TTG)	ttk ←	division inhibitor
RA	2,526,709	A→G	48.5%	I91I (ATT→ATC)	ttk ←	division inhibitor
RA	2,526,757	G→A	27.4%	N75N (AAC→AAT)	ttk ←	division inhibitor
RA	2,530,970	G→T	48.9%	T216T (ACG→ACT)	mutM →	formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase
RA	2,531,297	C→A	17.8%	L118L (CTG→CTT)	coaD ←	pantetheine‑phosphate adenylyltransferase
RA	2,534,716	C→T	30.2%	Y103Y (TAC→TAT)	rfaG →	glucosyltransferase I
RA	2,534,728	T→A	32.1%	V107V (GTT→GTA)	rfaG →	glucosyltransferase I
RA	2,534,734	A→G	31.4%	Q109Q (CAA→CAG)	rfaG →	glucosyltransferase I
RA	2,546,268	A→G	39.5%	S93S (TCT→TCC)	rfaF ←	ADP‑heptose:LPS heptosyltransferase II
RA	2,546,283	G→A	34.7%	P88P (CCC→CCT)	rfaF ←	ADP‑heptose:LPS heptosyltransferase II
RA	2,546,910	G→A	34.6%	N193N (AAC→AAT)	rfaD ←	ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
RA	2,547,132	G→A	71.5%	T119T (ACC→ACT)	rfaD ←	ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
RA	2,547,147	A→G	68.3%	A114A (GCT→GCC)	rfaD ←	ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
RA	2,547,150	G→A	66.7%	Y113Y (TAC→TAT)	rfaD ←	ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
RA	2,547,168	A→G	51.8%	R107R (CGT→CGC)	rfaD ←	ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
RA	2,547,177	G→A	49.1%	C104C (TGC→TGT)	rfaD ←	ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
RA	2,551,684	A→G	51.2%	E97E (GAA→GAG)	yibD →	predicted glycosyl transferase
RA	2,552,329	C→G	31.5%	V312V (GTC→GTG)	yibD →	predicted glycosyl transferase
RA	2,554,362	G→C	52.7%	L92L (CTC→CTG)	envC ←	protease with a role in cell division
RA	2,554,371	G→A	53.8%	L89L (CTC→CTT)	envC ←	protease with a role in cell division
RA	2,555,847	G→A	31.6%	G123G (GGC→GGT)	gpmI ←	phosphoglycero mutase III, cofactor‑independent
RA	2,555,850	G→A	31.6%	G122G (GGC→GGT)	gpmI ←	phosphoglycero mutase III, cofactor‑independent
RA	2,555,880	C→T	53.6%	A112A (GCG→GCA)	gpmI ←	phosphoglycero mutase III, cofactor‑independent
RA	2,556,062	G→A	27.9%	L52L (CTG→TTG)	gpmI ←	phosphoglycero mutase III, cofactor‑independent
RA	2,556,078	T→C	26.8%	L46L (CTA→CTG)	gpmI ←	phosphoglycero mutase III, cofactor‑independent
RA	2,557,493	C→T	48.5%	S49S (TCC→TCT)	secB →	protein export chaperone
RA	2,557,631	G→A	18.6%	A95A (GCG→GCA)	secB →	protein export chaperone
RA	2,557,643	A→C	14.3%	G99G (GGA→GGC)	secB →	protein export chaperone
RA	2,558,404	T→C	66.8%	V197V (GTT→GTC)	gpsA →	glycerol‑3‑phosphate dehydrogenase (NAD+)
RA	2,558,416	T→C	59.2%	G201G (GGT→GGC)	gpsA →	glycerol‑3‑phosphate dehydrogenase (NAD+)
RA	2,558,446	T→C	40.0%	G211G (GGT→GGC)	gpsA →	glycerol‑3‑phosphate dehydrogenase (NAD+)
RA	2,558,488	A→G	32.0%	E225E (GAA→GAG)	gpsA →	glycerol‑3‑phosphate dehydrogenase (NAD+)
RA	2,559,844	T→C	31.6%	V139V (GTA→GTG)	yibK ←	predicted rRNA methylase
RA	2,561,280	T→C	32.7%	P123P (CCA→CCG)	lldD ←	L‑lactate dehydrogenase, FMN‑linked
RA	2,561,283	G→A	32.3%	R122R (CGC→CGT)	lldD ←	L‑lactate dehydrogenase, FMN‑linked
RA	2,561,286	C→T	32.3%	K121K (AAG→AAA)	lldD ←	L‑lactate dehydrogenase, FMN‑linked
RA	2,561,292	G→A	31.8%	A119A (GCC→GCT)	lldD ←	L‑lactate dehydrogenase, FMN‑linked
RA	2,561,295	T→C	31.9%	P118P (CCA→CCG)	lldD ←	L‑lactate dehydrogenase, FMN‑linked
RA	2,561,298	C→A	31.9%	A117A (GCG→GCT)	lldD ←	L‑lactate dehydrogenase, FMN‑linked
RA	2,561,301	G→C	31.9%	V116V (GTC→GTG)	lldD ←	L‑lactate dehydrogenase, FMN‑linked
RA	2,561,935	G→A	56.5%	L163L (CTG→TTG)	lldR ←	DNA‑binding transcriptional repressor
RA	2,561,939	G→A	66.3%	I161I (ATC→ATT)	lldR ←	DNA‑binding transcriptional repressor
RA	2,561,951	G→A	65.4%	A157A (GCC→GCT)	lldR ←	DNA‑binding transcriptional repressor
RA	2,562,227	G→A	61.9%	R65R (CGC→CGT)	lldR ←	DNA‑binding transcriptional repressor
RA	2,562,245	G→A	41.7%	G59G (GGC→GGT)	lldR ←	DNA‑binding transcriptional repressor
RA	2,562,251	A→G	41.1%	S57S (AGT→AGC)	lldR ←	DNA‑binding transcriptional repressor
RA	2,562,254	C→T	41.1%	V56V (GTG→GTA)	lldR ←	DNA‑binding transcriptional repressor
RA	2,562,263	T→C	44.0%	A53A (GCA→GCG)	lldR ←	DNA‑binding transcriptional repressor
RA	2,563,066	A→G	19.9%	N337N (AAT→AAC)	lldP ←	L‑lactate permease
RA	2,563,090	G→A	18.2%	G329G (GGC→GGT)	lldP ←	L‑lactate permease
RA	2,563,093	A→G	18.3%	G328G (GGT→GGC)	lldP ←	L‑lactate permease
RA	2,563,096	C→T	19.4%	S327S (TCG→TCA)	lldP ←	L‑lactate permease
RA	2,563,099	T→A	22.3%	A326A (GCA→GCT)	lldP ←	L‑lactate permease
RA	2,563,240	A→G	53.2%	D279D (GAT→GAC)	lldP ←	L‑lactate permease
RA	2,563,246	A→G	45.2%	F277F (TTT→TTC)	lldP ←	L‑lactate permease
RA	2,563,249	A→G	45.2%	R276R (CGT→CGC)	lldP ←	L‑lactate permease
RA	2,563,258	A→G	52.9%	R273R (CGT→CGC)	lldP ←	L‑lactate permease
RA	2,566,476	T→C	40.7%	A192A (GCA→GCG)	mtlD ←	mannitol‑1‑phosphate dehydrogenase, NAD(P)‑binding
RA	2,566,491	C→G	28.9%	T187T (ACG→ACC)	mtlD ←	mannitol‑1‑phosphate dehydrogenase, NAD(P)‑binding
RA	2,569,387	C→T	36.0%	intergenic (‑193/‑344)	mtlA ← / → yibI	fused mannitol‑specific PTS enzyme IIABC components/predicted inner membrane protein
RA	2,569,389	T→C	35.1%	intergenic (‑195/‑342)	mtlA ← / → yibI	fused mannitol‑specific PTS enzyme IIABC components/predicted inner membrane protein
RA	2,569,401	C→T	27.2%	intergenic (‑207/‑330)	mtlA ← / → yibI	fused mannitol‑specific PTS enzyme IIABC components/predicted inner membrane protein
RA	2,571,096	A→C	63.4%	D334A (GAT→GCT)	yibH →	hypothetical protein
RA	2,574,961	T→C	58.4%	R212R (CGT→CGC)	glyS →	glycine tRNA synthetase, beta subunit
RA	2,575,573	T→C	44.3%	Y416Y (TAT→TAC)	glyS →	glycine tRNA synthetase, beta subunit
RA	2,575,876	T→C	59.1%	N517N (AAT→AAC)	glyS →	glycine tRNA synthetase, beta subunit
RA	2,575,885	A→G	43.8%	V520V (GTA→GTG)	glyS →	glycine tRNA synthetase, beta subunit
RA	2,576,572	T→C	59.0%	E509E (GAA→GAG)	treF ←	cytoplasmic trehalase
RA	2,582,329	T→C	24.6%	V150V (GTT→GTC)	gadX →	DNA‑binding transcriptional dual regulator
RA	2,582,398	T→C	16.6%	S173S (AGT→AGC)	gadX →	DNA‑binding transcriptional dual regulator
RA	2,582,427	A→G	39.2%	E183G (GAG→GGG) ‡	gadX →	DNA‑binding transcriptional dual regulator
RA	2,582,428	G→T	39.6%	E183D (GAG→GAT) ‡	gadX →	DNA‑binding transcriptional dual regulator
RA	2,582,431	A→G	44.4%	T184T (ACA→ACG)	gadX →	DNA‑binding transcriptional dual regulator
RA	2,582,461	A→G	44.6%	R194R (AGA→AGG)	gadX →	DNA‑binding transcriptional dual regulator
RA	2,582,467	A→G	51.0%	Q196Q (CAA→CAG)	gadX →	DNA‑binding transcriptional dual regulator
RA	2,583,233	T→A	44.8%	D54E (GAT→GAA)	gadW →	DNA‑binding transcriptional activator
RA	2,583,273	C→T	35.0%	L68L (CTA→TTA) ‡	gadW →	DNA‑binding transcriptional activator
RA	2,583,275	A→G	37.7%	L68L (CTA→CTG) ‡	gadW →	DNA‑binding transcriptional activator
RA	2,584,463	T→C	45.6%	K938K (AAA→AAG)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,584,697	T→C	40.8%	L860L (CTA→CTG)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,585,609	G→A	70.3%	R556R (CGC→CGT)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,585,696	A→G	46.6%	D527D (GAT→GAC)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,585,708	T→C	50.1%	Q523Q (CAA→CAG)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,586,227	T→G	77.7%	L350L (CTA→CTC)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,586,248	T→C	52.7%	T343T (ACA→ACG)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,587,031	A→G	24.9%	S82S (AGT→AGC)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,587,208	A→G	22.6%	G23G (GGT→GGC)	mdtF ←	multidrug transporter, RpoS‑dependent
RA	2,587,673	T→C	58.5%	T262T (ACA→ACG)	mdtE ←	multidrug resistance efflux transporter
RA	2,587,708	T→C	46.2%	S251G (AGC→GGC)	mdtE ←	multidrug resistance efflux transporter
RA	2,587,712	G→A	45.4%	R249R (CGC→CGT)	mdtE ←	multidrug resistance efflux transporter
RA	2,588,902	A→G	30.1%	N141N (AAT→AAC)	gadE ←	DNA‑binding transcriptional activator
RA	2,588,911	C→T	16.3%	S138S (TCG→TCA)	gadE ←	DNA‑binding transcriptional activator
RA	2,589,911	T→C	29.0%	intergenic (‑587/+212)	gadE ← / ← hdeD	DNA‑binding transcriptional activator/acid‑resistance membrane protein
RA	2,591,000	T→A	36.0%	V17V (GTT→GTA)	hdeA →	stress response protein acid‑resistance protein
RA	2,591,021	G→A	47.0%	A24A (GCG→GCA)	hdeA →	stress response protein acid‑resistance protein
RA	2,591,550	C→A	46.7%	T51T (ACC→ACA)	hdeB →	acid‑resistance protein
RA	2,591,553	G→A	47.9%	P52P (CCG→CCA)	hdeB →	acid‑resistance protein
RA	2,591,559	A→G	61.2%	A54A (GCA→GCG)	hdeB →	acid‑resistance protein
RA	2,593,801	T→C	31.3%	intergenic (‑72/+1069)	slp ← / ← arsC	outer membrane lipoprotein/arsenate reductase
RA	2,599,311	C→T	58.2%	P279P (CCG→CCA)	yhiR ←	predicted DNA (exogenous) processing protein
RA	2,600,955	C→T	50.0%	A202A (GCC→GCT)	prlC →	oligopeptidase A
RA	2,601,306	T→C	26.1%	F319F (TTT→TTC)	prlC →	oligopeptidase A
RA	2,601,336	G→A	39.9%	L329L (TTG→TTA)	prlC →	oligopeptidase A
RA	2,601,339	G→A	41.4%	Q330Q (CAG→CAA)	prlC →	oligopeptidase A
RA	2,601,372	A→G	40.6%	Q341Q (CAA→CAG)	prlC →	oligopeptidase A
RA	2,601,906	T→C	100%	S519S (TCT→TCC)	prlC →	oligopeptidase A
RA	2,604,020	C→T	37.4%	V217V (GTG→GTA)	yhiP ←	predicted transporter
RA	2,604,035	G→A	40.4%	S212S (AGC→AGT)	yhiP ←	predicted transporter
RA	2,604,047	T→C	50.0%	P208P (CCA→CCG)	yhiP ←	predicted transporter
RA	2,604,413	A→G	53.9%	L86L (CTT→CTC)	yhiP ←	predicted transporter
RA	2,604,434	C→T	55.3%	G79G (GGG→GGA)	yhiP ←	predicted transporter
RA	2,605,106	A→G	34.5%	L106L (TTG→CTG)	uspA ←	universal stress global response regulator
RA	2,605,140	A→T	57.1%	V94V (GTT→GTA)	uspA ←	universal stress global response regulator
RA	2,605,152	G→A	44.0%	D90D (GAC→GAT)	uspA ←	universal stress global response regulator
RA	2,606,682	G→A	32.8%	R403R (CGC→CGT)	pitA ←	phosphate transporter, low‑affinity
RA	2,606,922	G→A	23.9%	T323T (ACC→ACT)	pitA ←	phosphate transporter, low‑affinity
RA	2,606,931	A→G	38.8%	G320G (GGT→GGC)	pitA ←	phosphate transporter, low‑affinity
RA	2,608,347	C→A	32.5%	T85T (ACG→ACT)	nikR ←	DNA‑binding transcriptional regulator, Ni‑binding
RA	2,608,350	G→A	32.7%	A84A (GCC→GCT)	nikR ←	DNA‑binding transcriptional regulator, Ni‑binding
RA	2,608,353	G→A	32.7%	V83V (GTC→GTT)	nikR ←	DNA‑binding transcriptional regulator, Ni‑binding
RA	2,608,356	G→T	31.4%	S82S (TCC→TCA)	nikR ←	DNA‑binding transcriptional regulator, Ni‑binding
RA	2,608,362	G→A	30.3%	D80D (GAC→GAT)	nikR ←	DNA‑binding transcriptional regulator, Ni‑binding
RA	2,609,041	A→C	51.3%	S125A (TCC→GCC)	nikE ←	nickel transporter subunit
RA	2,609,051	T→C	53.9%	S121S (TCA→TCG)	nikE ←	nickel transporter subunit
RA	2,609,188	G→A	43.1%	L76L (CTG→TTG)	nikE ←	nickel transporter subunit
RA	2,609,767	C→G	35.7%	L136L (CTG→CTC)	nikD ←	nickel transporter subunit
RA	2,612,173	T→C	47.3%	K450K (AAA→AAG)	nikA ←	nickel transporter subunit
RA	2,612,185	T→A	45.6%	G446G (GGA→GGT)	nikA ←	nickel transporter subunit
RA	2,612,212	T→C	30.8%	S437S (TCA→TCG)	nikA ←	nickel transporter subunit
RA	2,612,473	C→T	50.0%	A350A (GCG→GCA)	nikA ←	nickel transporter subunit
RA	2,612,535	T→G	68.2%	S330R (AGC→CGC)	nikA ←	nickel transporter subunit
RA	2,612,737	G→A	69.2%	T262T (ACC→ACT)	nikA ←	nickel transporter subunit
RA	2,612,752	A→G	58.4%	N257N (AAT→AAC)	nikA ←	nickel transporter subunit
RA	2,613,717	A→T	67.4%	L168L (CTT→CTA)	acpT ←	holo‑(acyl carrier protein) synthase 2
RA	2,613,749	G→T	73.1%	H158N (CAC→AAC)	acpT ←	holo‑(acyl carrier protein) synthase 2
RA	2,613,876	A→G	25.9%	A115A (GCT→GCC)	acpT ←	holo‑(acyl carrier protein) synthase 2
RA	2,614,173	T→A	44.9%	P16P (CCA→CCT)	acpT ←	holo‑(acyl carrier protein) synthase 2
RA	2,615,623	A→G	57.2%	G56G (GGA→GGG)	yhhS →	predicted transporter
RA	2,615,665	C→T	58.5%	R70R (CGC→CGT)	yhhS →	predicted transporter
RA	2,615,866	A→G	19.5%	L137L (CTA→CTG)	yhhS →	predicted transporter
RA	2,615,872	C→T	18.3%	G139G (GGC→GGT)	yhhS →	predicted transporter
RA	2,615,887	C→T	13.8%	G144G (GGC→GGT)	yhhS →	predicted transporter
RA	2,616,025	G→A	100%	A190A (GCG→GCA)	yhhS →	predicted transporter
RA	2,616,163	C→T	37.0%	V236V (GTC→GTT)	yhhS →	predicted transporter
RA	2,617,685	C→T	35.1%	Q96Q (CAG→CAA)	yhhQ ←	conserved inner membrane protein
RA	2,617,691	G→T	32.0%	S94S (TCC→TCA)	yhhQ ←	conserved inner membrane protein
RA	2,617,694	A→C	31.7%	G93G (GGT→GGG)	yhhQ ←	conserved inner membrane protein
RA	2,619,653	A→G	50.7%	A362A (GCT→GCC)	zntA ←	zinc, cobalt and lead efflux system
RA	2,619,671	G→T	57.8%	P356P (CCC→CCA)	zntA ←	zinc, cobalt and lead efflux system
RA	2,619,677	A→G	57.9%	Y354Y (TAT→TAC)	zntA ←	zinc, cobalt and lead efflux system
RA	2,619,680	G→A	39.7%	I353I (ATC→ATT)	zntA ←	zinc, cobalt and lead efflux system
RA	2,619,848	T→C	23.6%	A297A (GCA→GCG)	zntA ←	zinc, cobalt and lead efflux system
RA	2,619,860	C→A	30.5%	P293P (CCG→CCT)	zntA ←	zinc, cobalt and lead efflux system
RA	2,619,872	G→T	49.2%	G289G (GGC→GGA)	zntA ←	zinc, cobalt and lead efflux system
RA	2,619,884	G→A	61.8%	S285S (AGC→AGT)	zntA ←	zinc, cobalt and lead efflux system
RA	2,620,337	T→A	35.7%	L134L (CTA→CTT)	zntA ←	zinc, cobalt and lead efflux system
RA	2,623,335	T→C	50.7%	A130A (GCT→GCC)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,623,632	G→A	48.0%	E229E (GAG→GAA)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,623,644	G→A	42.9%	E233E (GAG→GAA)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,623,650	T→G	41.2%	L235L (CTT→CTG)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,623,815	C→T	76.0%	G290G (GGC→GGT)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,623,819	G→A	77.4%	A292T (GCG→ACG)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,623,827	T→C	100%	F294F (TTT→TTC)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,624,094	A→C	42.6%	T383T (ACA→ACC)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,624,109	G→A	32.7%	Q388Q (CAG→CAA)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,624,178	G→T	47.2%	A411A (GCG→GCT)	ftsY →	fused Signal Recognition Particle (SRP) receptor
RA	2,625,741	T→C	61.4%	R213R (CGT→CGC)	ftsX →	predicted transporter subunit
RA	2,627,107	A→G	35.7%	E234E (GAA→GAG)	rpoH →	RNA polymerase, sigma 32 (sigma H) factor
RA	2,627,110	C→T	37.4%	R235R (CGC→CGT)	rpoH →	RNA polymerase, sigma 32 (sigma H) factor
RA	2,627,113	C→T	38.4%	S236S (AGC→AGT)	rpoH →	RNA polymerase, sigma 32 (sigma H) factor
RA	2,627,453	T→C	31.7%	intergenic (+193/‑78)	rpoH → / → livJ	RNA polymerase, sigma 32 (sigma H) factor/leucine/isoleucine/valine transporter subunit
RA	2,627,454	C→T	32.1%	intergenic (+194/‑77)	rpoH → / → livJ	RNA polymerase, sigma 32 (sigma H) factor/leucine/isoleucine/valine transporter subunit
RA	2,627,456	T→C	30.0%	intergenic (+196/‑75)	rpoH → / → livJ	RNA polymerase, sigma 32 (sigma H) factor/leucine/isoleucine/valine transporter subunit
RA	2,627,458	C→T	30.6%	intergenic (+198/‑73)	rpoH → / → livJ	RNA polymerase, sigma 32 (sigma H) factor/leucine/isoleucine/valine transporter subunit
RA	2,627,701	C→T	35.2%	N57N (AAC→AAT)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,627,710	C→T	31.4%	G60G (GGC→GGT)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,627,713	C→T	31.4%	G61G (GGC→GGT)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,627,716	T→C	27.3%	I62I (ATT→ATC)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,241	C→T	100%	R237R (CGC→CGT)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,259	T→C	100%	T243T (ACT→ACC)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,280	T→C	73.3%	G250G (GGT→GGC)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,292	T→C	63.8%	V254V (GTT→GTC)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,493	T→G	21.7%	A321A (GCT→GCG)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,496	A→G	21.6%	E322E (GAA→GAG)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,502	C→T	19.8%	A324A (GCC→GCT)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,523	C→G	30.6%	S331S (TCC→TCG)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,526	G→T	30.1%	V332V (GTG→GTT)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,532	C→G	24.2%	T334T (ACC→ACG)	livJ →	leucine/isoleucine/valine transporter subunit
RA	2,628,858	C→T	53.6%	G116G (GGG→GGA)	yhhK ←	conserved hypothetical protein
RA	2,628,867	C→T	51.7%	Q113Q (CAG→CAA) ‡	yhhK ←	conserved hypothetical protein
RA	2,628,868	T→C	47.7%	Q113R (CAG→CGG) ‡	yhhK ←	conserved hypothetical protein
RA	2,628,879	C→T	33.2%	T109T (ACG→ACA)	yhhK ←	conserved hypothetical protein
RA	2,630,947	A→C	25.5%	S54S (TCA→TCC)	livH →	leucine/isoleucine/valine transporter subunit
RA	2,630,965	G→A	26.0%	A60A (GCG→GCA)	livH →	leucine/isoleucine/valine transporter subunit
RA	2,631,436	G→A	59.0%	A217A (GCG→GCA)	livH →	leucine/isoleucine/valine transporter subunit
RA	2,631,652	T→C	38.8%	I289I (ATT→ATC)	livH →	leucine/isoleucine/valine transporter subunit
RA	2,631,750	G→T	26.4%	A14A (GCG→GCT)	livM →	leucine/isoleucine/valine transporter subunit
RA	2,633,582	C→T	57.2%	R200R (CGC→CGT)	livG →	leucine/isoleucine/valine transporter subunit
RA	2,633,585	T→C	59.7%	N201N (AAT→AAC)	livG →	leucine/isoleucine/valine transporter subunit
RA	2,634,911	G→T	31.4%	A16A (GCG→GCT)	ugpB →	glycerol‑3‑phosphate transporter subunit
RA	2,634,919	G→C	53.1%	G19A (GGG→GCG) ‡	ugpB →	glycerol‑3‑phosphate transporter subunit
RA	2,634,920	G→A	53.1%	G19G (GGG→GGA) ‡	ugpB →	glycerol‑3‑phosphate transporter subunit
RA	2,635,184	G→A	44.4%	V107V (GTG→GTA)	ugpB →	glycerol‑3‑phosphate transporter subunit
RA	2,635,532	G→T	61.3%	L223L (CTG→CTT)	ugpB →	glycerol‑3‑phosphate transporter subunit
RA	2,635,541	T→C	64.4%	N226N (AAT→AAC)	ugpB →	glycerol‑3‑phosphate transporter subunit
RA	2,636,862	C→T	73.7%	D195D (GAC→GAT)	ugpA →	glycerol‑3‑phosphate transporter subunit
RA	2,636,865	T→G	45.2%	G196G (GGT→GGG)	ugpA →	glycerol‑3‑phosphate transporter subunit
RA	2,636,937	A→G	60.8%	V220V (GTA→GTG)	ugpA →	glycerol‑3‑phosphate transporter subunit
RA	2,637,188	G→A	68.1%	T9T (ACG→ACA)	ugpE →	glycerol‑3‑phosphate transporter subunit
RA	2,638,461	C→T	54.8%	R151R (CGC→CGT)	ugpC →	glycerol‑3‑phosphate transporter subunit
RA	2,638,464	T→G	60.7%	D152E (GAT→GAG)	ugpC →	glycerol‑3‑phosphate transporter subunit
RA	2,638,470	G→A	67.8%	A154A (GCG→GCA)	ugpC →	glycerol‑3‑phosphate transporter subunit
RA	2,638,599	A→G	18.3%	E197E (GAA→GAG)	ugpC →	glycerol‑3‑phosphate transporter subunit
RA	2,639,432	C→T	33.9%	T119T (ACC→ACT)	ugpQ →	glycerophosphodiester phosphodiesterase, cytosolic
RA	2,639,637	A→C	68.8%	I188L (ATT→CTT)	ugpQ →	glycerophosphodiester phosphodiesterase, cytosolic
RA	2,640,057	A→G	18.3%	L64L (TTG→CTG)	yhhA ←	conserved hypothetical protein
RA	2,640,061	A→C	17.6%	T62T (ACT→ACG)	yhhA ←	conserved hypothetical protein
RA	2,640,112	A→C	24.4%	T45T (ACT→ACG)	yhhA ←	conserved hypothetical protein
RA	2,640,121	C→T	36.1%	Q42Q (CAG→CAA)	yhhA ←	conserved hypothetical protein
RA	2,640,124	G→A	35.1%	T41T (ACC→ACT)	yhhA ←	conserved hypothetical protein
RA	2,640,148	T→G	24.3%	I33I (ATA→ATC)	yhhA ←	conserved hypothetical protein
RA	2,641,322	C→T	50.7%	S319S (AGC→AGT)	ggt →	gamma‑glutamyltranspeptidase
RA	2,641,712	T→C	68.1%	G449G (GGT→GGC)	ggt →	gamma‑glutamyltranspeptidase
RA	2,641,871	C→A	78.6%	G502G (GGC→GGA)	ggt →	gamma‑glutamyltranspeptidase
RA	2,641,872	T→A	78.6%	L503M (TTG→ATG)	ggt →	gamma‑glutamyltranspeptidase
RA	2,642,037	G→A	25.5%	V558I (GTT→ATT)	ggt →	gamma‑glutamyltranspeptidase
RA	2,642,043	C→T	58.2%	P560S (CCG→TCG)	ggt →	gamma‑glutamyltranspeptidase
RA	2,642,048	C→T	64.0%	D561D (GAC→GAT)	ggt →	gamma‑glutamyltranspeptidase
RA	2,642,710	C→A	42.8%	S114S (TCC→TCA)	gntR →	DNA‑binding transcriptional repressor
RA	2,642,719	C→A	28.1%	S117S (TCC→TCA)	gntR →	DNA‑binding transcriptional repressor
RA	2,643,149	C→T	34.7%	L261L (CTG→TTG)	gntR →	DNA‑binding transcriptional repressor
RA	2,643,157	A→G	27.5%	L263L (TTA→TTG)	gntR →	DNA‑binding transcriptional repressor
RA	2,643,235	C→T	23.5%	S289S (AGC→AGT)	gntR →	DNA‑binding transcriptional repressor
RA	2,645,851	A→G	35.4%	G58G (GGT→GGC)	yhgN ←	predicted antibiotic transporter
RA	2,645,878	C→A	29.2%	L49L (CTG→CTT)	yhgN ←	predicted antibiotic transporter
RA	2,646,646	T→C	35.0%	L144L (TTG→CTG)	asd →	aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding
RA	2,647,443	T→G	15.0%	intergenic (+123/‑150)	asd → / → glgB	aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding/1,4‑alpha‑glucan branching enzyme
RA	2,647,451	T→C	16.2%	intergenic (+131/‑142)	asd → / → glgB	aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding/1,4‑alpha‑glucan branching enzyme
RA	2,647,670	A→G	48.9%	G26G (GGA→GGG)	glgB →	1,4‑alpha‑glucan branching enzyme
RA	2,647,949	G→A	55.8%	L119L (CTG→CTA)	glgB →	1,4‑alpha‑glucan branching enzyme
RA	2,647,952	C→T	55.8%	R120R (CGC→CGT)	glgB →	1,4‑alpha‑glucan branching enzyme
RA	2,648,012	C→T	100%	F140F (TTC→TTT)	glgB →	1,4‑alpha‑glucan branching enzyme
RA	2,648,441	C→T	18.6%	H283H (CAC→CAT)	glgB →	1,4‑alpha‑glucan branching enzyme
RA	2,648,447	A→G	33.3%	E285E (GAA→GAG)	glgB →	1,4‑alpha‑glucan branching enzyme
RA	2,648,456	C→T	43.5%	P288P (CCC→CCT)	glgB →	1,4‑alpha‑glucan branching enzyme
RA	2,649,084	G→A	36.6%	V498I (GTT→ATT)	glgB →	1,4‑alpha‑glucan branching enzyme
RA	2,652,018	T→C	56.1%	I84I (ATT→ATC)	glgC →	glucose‑1‑phosphate adenylyltransferase
RA	2,654,894	A→C	54.4%	G127G (GGA→GGC)	glgP →	glycogen phosphorylase
RA	2,654,915	T→C	44.4%	L134L (CTT→CTC)	glgP →	glycogen phosphorylase
RA	2,656,058	T→G	38.8%	A515A (GCT→GCG)	glgP →	glycogen phosphorylase
RA	2,656,097	A→G	37.8%	A528A (GCA→GCG)	glgP →	glycogen phosphorylase
RA	2,656,205	T→C	47.9%	H564H (CAT→CAC)	glgP →	glycogen phosphorylase
RA	2,656,211	T→C	46.0%	I566I (ATT→ATC)	glgP →	glycogen phosphorylase
RA	2,658,048	T→G	78.9%	A345A (GCA→GCC)	glpD ←	sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding
RA	2,658,057	A→G	79.0%	N342N (AAT→AAC) ‡	glpD ←	sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding
RA	2,658,059	T→C	79.0%	N342D (AAT→GAT) ‡	glpD ←	sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding
RA	2,659,376	A→G	18.4%	G35G (GGA→GGG)	glpE →	thiosulfate:cyanide sulfurtransferase
RA	2,660,342	C→T	37.8%	L234L (CTG→TTG)	glpG →	predicted intramembrane serine protease
RA	2,660,954	G→A	48.5%	A155A (GCG→GCA)	glpR →	DNA‑binding transcriptional repressor
RA	2,661,032	G→A	70.6%	L181L (CTG→CTA)	glpR →	DNA‑binding transcriptional repressor
RA	2,662,258	G→A	100%	P191S (CCC→TCC)	rtcR ←	sigma 54‑dependent transcriptional regulator of rtcBA expression
RA	2,662,691	C→T	39.7%	L46L (TTG→TTA)	rtcR ←	sigma 54‑dependent transcriptional regulator of rtcBA expression
RA	2,662,700	T→C	32.5%	R43R (CGA→CGG)	rtcR ←	sigma 54‑dependent transcriptional regulator of rtcBA expression
RA	2,662,709	G→A	32.0%	V40V (GTC→GTT)	rtcR ←	sigma 54‑dependent transcriptional regulator of rtcBA expression
RA	2,663,379	T→C	48.3%	G121G (GGT→GGC)	rtcB →	conserved hypothetical protein
RA	2,663,382	C→A	45.8%	A122A (GCC→GCA)	rtcB →	conserved hypothetical protein
RA	2,663,394	A→G	62.3%	P126P (CCA→CCG)	rtcB →	conserved hypothetical protein
RA	2,663,412	T→G	52.3%	A132A (GCT→GCG)	rtcB →	conserved hypothetical protein
RA	2,663,427	T→G	47.2%	L137L (CTT→CTG)	rtcB →	conserved hypothetical protein
RA	2,663,430	A→G	38.1%	E138E (GAA→GAG)	rtcB →	conserved hypothetical protein
RA	2,664,111	A→G	26.8%	E365E (GAA→GAG)	rtcB →	conserved hypothetical protein
RA	2,664,129	A→G	29.4%	E371E (GAA→GAG)	rtcB →	conserved hypothetical protein
RA	2,664,355	A→G	100%	S37G (AGC→GGC)	rtcA →	RNA 3'‑terminal phosphate cyclase
RA	2,665,357	A→G	24.9%	D885D (GAT→GAC) ‡	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,665,358	T→G	25.0%	D885A (GAT→GCT) ‡	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,665,363	G→A	24.6%	R883R (CGC→CGT)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,665,366	A→G	15.6%	H882H (CAT→CAC)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,665,372	C→G	15.4%	V880V (GTG→GTC)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,665,375	G→A	14.8%	G879G (GGC→GGT)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,665,387	A→G	14.6%	Y875Y (TAT→TAC)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,665,537	A→C	31.2%	P825P (CCT→CCG)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,665,765	G→A	29.8%	R749R (CGC→CGT)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,666,038	A→C	36.1%	I658M (ATT→ATG)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,666,200	C→T	43.0%	Q604Q (CAG→CAA)	malT ←	DNA‑binding transcriptional activator, maltotriose‑ATP‑binding
RA	2,668,916	T→C	46.4%	N98N (AAT→AAC)	malP →	maltodextrin phosphorylase
RA	2,668,922	G→T	35.3%	T100T (ACG→ACT)	malP →	maltodextrin phosphorylase
RA	2,668,929	C→T	34.4%	L103L (CTG→TTG)	malP →	maltodextrin phosphorylase
RA	2,668,958	T→G	51.5%	G112G (GGT→GGG)	malP →	maltodextrin phosphorylase
RA	2,669,963	C→T	36.2%	N447N (AAC→AAT)	malP →	maltodextrin phosphorylase
RA	2,670,042	C→A	54.5%	Q474K (CAA→AAA)	malP →	maltodextrin phosphorylase
RA	2,670,071	G→A	43.2%	Q483Q (CAG→CAA)	malP →	maltodextrin phosphorylase
RA	2,671,600	C→T	72.0%	P192L (CCG→CTG)	malQ →	4‑alpha‑glucanotransferase
RA	2,671,959	C→T	28.6%	R312C (CGC→TGC)	malQ →	4‑alpha‑glucanotransferase
RA	2,671,973	T→A	21.2%	P316P (CCT→CCA)	malQ →	4‑alpha‑glucanotransferase
RA	2,674,145	A→G	25.5%	S131S (TCT→TCC)	gntT ←	gluconate transporter, high‑affinity GNT I system
RA	2,674,370	C→T	44.0%	G56G (GGG→GGA)	gntT ←	gluconate transporter, high‑affinity GNT I system
RA	2,675,191	C→A	45.5%	P94P (CCG→CCT)	gntY ←	predicted gluconate transport associated protein
RA	2,675,194	G→C	45.6%	A93A (GCC→GCG)	gntY ←	predicted gluconate transport associated protein
RA	2,675,206	T→C	51.5%	L89L (TTA→TTG) ‡	gntY ←	predicted gluconate transport associated protein
RA	2,675,208	A→G	55.4%	L89L (TTA→CTA) ‡	gntY ←	predicted gluconate transport associated protein
RA	2,675,212	G→C	52.9%	S87S (TCC→TCG)	gntY ←	predicted gluconate transport associated protein
RA	2,676,470	T→A	83.4%	P73P (CCT→CCA)	bioH →	carboxylesterase of pimeloyl‑CoA synthesis
RA	2,676,545	T→G	51.9%	R98R (CGT→CGG)	bioH →	carboxylesterase of pimeloyl‑CoA synthesis
RA	2,676,550	A→T	61.4%	Q100L (CAG→CTG)	bioH →	carboxylesterase of pimeloyl‑CoA synthesis
RA	2,676,992	C→T	20.9%	H247H (CAC→CAT)	bioH →	carboxylesterase of pimeloyl‑CoA synthesis
RA	2,677,313	T→C	42.8%	D206G (GAC→GGC)	yhgA ←	predicted transposase
RA	2,677,405	C→T	47.4%	L175L (CTG→CTA)	yhgA ←	predicted transposase
RA	2,677,424	T→A	35.3%	Q169L (CAG→CTG)	yhgA ←	predicted transposase
RA	2,677,561	G→A	24.8%	Y123Y (TAC→TAT)	yhgA ←	predicted transposase
RA	2,678,154	C→T	32.4%	R72H (CGC→CAC)	yhgG ←	predicted DNA‑binding transcriptional regulator
RA	2,678,500	C→T	24.6%	A730A (GCG→GCA)	feoB ←	fused ferrous iron transporter, protein B
RA	2,678,841	T→C	36.6%	I617V (ATA→GTA)	feoB ←	fused ferrous iron transporter, protein B
RA	2,678,875	T→C	23.9%	A605A (GCA→GCG)	feoB ←	fused ferrous iron transporter, protein B
RA	2,679,505	C→T	24.3%	V395V (GTG→GTA)	feoB ←	fused ferrous iron transporter, protein B
RA	2,679,577	C→G	29.5%	G371G (GGG→GGC)	feoB ←	fused ferrous iron transporter, protein B
RA	2,679,619	A→G	44.8%	I357I (ATT→ATC)	feoB ←	fused ferrous iron transporter, protein B
RA	2,680,432	G→T	26.2%	A86A (GCC→GCA)	feoB ←	fused ferrous iron transporter, protein B
RA	2,684,679	A→G	61.7%	L56L (TTA→TTG)	ompR →	DNA‑binding response regulator in two‑component regulatory system with EnvZ
RA	2,684,790	A→T	23.9%	V93V (GTA→GTT)	ompR →	DNA‑binding response regulator in two‑component regulatory system with EnvZ
RA	2,687,100	A→C	54.9%	G393G (GGT→GGG)	pck ←	phosphoenolpyruvate carboxykinase
RA	2,687,910	A→G	50.6%	A123A (GCT→GCC)	pck ←	phosphoenolpyruvate carboxykinase
RA	2,690,326	C→T	67.3%	A557V (GCG→GTG)	yhgE →	predicted inner membrane protein
RA	2,690,717	G→A	32.1%	T202T (ACC→ACT)	hslO ←	heat shock protein Hsp33
RA	2,693,488	G→A	55.6%	T380T (ACC→ACT)	yrfF ←	predicted inner membrane protein
RA	2,694,016	A→G	31.7%	R204R (CGT→CGC)	yrfF ←	predicted inner membrane protein
RA	2,694,489	G→A	25.5%	P47S (CCT→TCT)	yrfF ←	predicted inner membrane protein
RA	2,695,607	Δ1 bp	61.5%	intergenic (+100/+66)	nudE → / ← mrcA	ADP‑ribose diphosphatase/fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase
RA	2,695,611	T→C	64.2%	intergenic (+104/+62)	nudE → / ← mrcA	ADP‑ribose diphosphatase/fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase
RA	2,695,615	C→T	55.6%	intergenic (+108/+58)	nudE → / ← mrcA	ADP‑ribose diphosphatase/fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase
RA	2,696,690	A→G	31.0%	A512A (GCT→GCC)	mrcA ←	fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase
RA	2,696,696	C→T	31.6%	Q510Q (CAG→CAA)	mrcA ←	fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase
RA	2,697,431	G→A	43.2%	S265S (AGC→AGT)	mrcA ←	fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase
RA	2,697,440	C→T	35.5%	P262P (CCG→CCA)	mrcA ←	fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase
RA	2,698,806	G→T	41.5%	V154V (GTG→GTT)	yrfD →	predicted pilus assembly protein
RA	2,698,818	C→T	54.2%	T158T (ACC→ACT)	yrfD →	predicted pilus assembly protein
RA	2,699,330	G→A	100%	K69K (AAG→AAA)	yrfC →	predicted fimbrial assembly protein
RA	2,700,539	C→G	33.6%	V49V (GTC→GTG)	hofQ →	predicted fimbrial transporter
RA	2,700,542	G→T	36.3%	V50V (GTG→GTT)	hofQ →	predicted fimbrial transporter
RA	2,700,761	C→T	27.6%	T123T (ACC→ACT)	hofQ →	predicted fimbrial transporter
RA	2,700,779	G→C	29.0%	A129A (GCG→GCC)	hofQ →	predicted fimbrial transporter
RA	2,700,785	A→G	28.9%	E131E (GAA→GAG)	hofQ →	predicted fimbrial transporter
RA	2,700,888	G→A	29.5%	A166T (GCG→ACG)	hofQ →	predicted fimbrial transporter
RA	2,700,906	G→T	36.9%	A172S (GCG→TCG)	hofQ →	predicted fimbrial transporter
RA	2,703,017	T→C	70.0%	D136D (GAT→GAC)	aroB →	3‑dehydroquinate synthase
RA	2,704,968	C→T	24.1%	Y393Y (TAC→TAT)	damX →	hypothetical protein
RA	2,705,113	A→C	25.5%	intergenic (+37/‑70)	damX → / → dam	hypothetical protein/DNA adenine methylase
RA	2,705,446	C→T	6.5%	A88A (GCC→GCT)	dam →	DNA adenine methylase
RA	2,706,462	C→T	32.3%	N142N (AAC→AAT)	rpe →	D‑ribulose‑5‑phosphate 3‑epimerase
RA	2,712,432	A→T	68.4%	G643G (GGT→GGA)	nirB ←	nitrite reductase, large subunit, NAD(P)H‑binding
RA	2,713,305	A→G	39.8%	S352S (AGT→AGC)	nirB ←	nitrite reductase, large subunit, NAD(P)H‑binding
RA	2,713,566	A→T	29.7%	I265I (ATT→ATA)	nirB ←	nitrite reductase, large subunit, NAD(P)H‑binding
RA	2,713,572	A→G	30.4%	I263I (ATT→ATC)	nirB ←	nitrite reductase, large subunit, NAD(P)H‑binding
RA	2,713,857	A→G	70.3%	G168G (GGT→GGC)	nirB ←	nitrite reductase, large subunit, NAD(P)H‑binding
RA	2,718,421	C→T	14.1%	I77I (ATC→ATT)	argD →	bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase
RA	2,719,154	C→T	38.1%	L322L (CTG→TTG)	argD →	bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase
RA	2,719,183	A→G	41.4%	V331V (GTA→GTG)	argD →	bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase
RA	2,719,476	C→T	46.6%	intergenic (+65/+2)	argD → / ← yhfK	bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase/conserved inner membrane protein
RA	2,720,333	C→T	31.8%	V416V (GTG→GTA)	yhfK ←	conserved inner membrane protein
RA	2,720,384	C→T	57.2%	T399T (ACG→ACA)	yhfK ←	conserved inner membrane protein
RA	2,720,417	C→A	61.5%	L388L (CTG→CTT)	yhfK ←	conserved inner membrane protein
RA	2,721,260	C→T	51.5%	E107E (GAG→GAA)	yhfK ←	conserved inner membrane protein
RA	2,721,332	T→C	55.0%	L83L (CTA→CTG) ‡	yhfK ←	conserved inner membrane protein
RA	2,721,334	G→C	54.9%	L83V (CTA→GTA) ‡	yhfK ←	conserved inner membrane protein
RA	2,722,373	A→G	59.4%	intergenic (‑122/‑180)	crp ← / → yhfA	DNA‑binding transcriptional dual regulator/conserved hypothetical protein
RA	2,722,403	G→A	65.9%	intergenic (‑152/‑150)	crp ← / → yhfA	DNA‑binding transcriptional dual regulator/conserved hypothetical protein
RA	2,723,207	G→C	43.7%	L225L (CTC→CTG)	prkB ←	predicted phosphoribulokinase
RA	2,724,675	C→T	73.4%	K165K (AAG→AAA)	yheT ←	predicted hydrolase
RA	2,725,134	G→A	51.3%	F12F (TTC→TTT)	yheT ←	predicted hydrolase
RA	2,725,155	C→T	47.5%	T5T (ACG→ACA)	yheT ←	predicted hydrolase
RA	2,725,709	A→G	68.2%	T458T (ACT→ACC)	yheS ←	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	2,726,336	G→A	48.9%	Y249Y (TAC→TAT)	yheS ←	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	2,727,579	C→T	44.9%	L124L (CTG→TTG)	kefG →	component of potassium effux complex with KefB
RA	2,727,775	C→T	35.3%	S4S (TCC→TCT)	kefB →	potassium:proton antiporter
RA	2,729,065	C→T	60.6%	S434S (AGC→AGT)	kefB →	potassium:proton antiporter
RA	2,729,737	T→C	38.7%	V53V (GTT→GTC)	yheV →	hypothetical protein
RA	2,729,758	C→T	49.4%	I60I (ATC→ATT)	yheV →	hypothetical protein
RA	2,732,515	G→A	30.3%	L195L (CTG→CTA)	yheO →	predicted DNA‑binding transcriptional regulator
RA	2,732,551	T→C	40.4%	D207D (GAT→GAC)	yheO →	predicted DNA‑binding transcriptional regulator
RA	2,732,733	G→A	47.8%	L27L (CTG→CTA)	yheN →	predicted intracellular sulfur oxidation protein
RA	2,732,742	T→A	54.3%	D30E (GAT→GAA)	yheN →	predicted intracellular sulfur oxidation protein
RA	2,733,426	C→T	32.4%	R7R (CGC→CGT)	yheL →	predicted intracellular sulfur oxidation protein
RA	2,733,525	T→C	33.7%	G40G (GGT→GGC)	yheL →	predicted intracellular sulfur oxidation protein
RA	2,733,673	C→T	31.5%	P90S (CCC→TCC)	yheL →	predicted intracellular sulfur oxidation protein
RA	2,736,005	T→A	51.0%	A383A (GCT→GCA)	fusA →	protein chain elongation factor EF‑G
RA	2,736,011	T→A	50.9%	A385A (GCT→GCA)	fusA →	protein chain elongation factor EF‑G
RA	2,736,887	T→C	52.3%	R677R (CGT→CGC)	fusA →	protein chain elongation factor EF‑G
RA	2,752,749	C→T	23.7%	H78H (CAC→CAT)	yhdN →	conserved hypothetical protein
RA	2,752,776	C→T	24.8%	S87S (AGC→AGT)	yhdN →	conserved hypothetical protein
RA	2,753,807	C→T	71.2%	Q65Q (CAG→CAA)	mscL ←	mechanosensitive channel
RA	2,753,810	C→G	60.6%	A64A (GCG→GCC)	mscL ←	mechanosensitive channel
RA	2,753,813	A→C	57.2%	D63E (GAT→GAG)	mscL ←	mechanosensitive channel
RA	2,753,843	A→G	35.2%	D53D (GAT→GAC)	mscL ←	mechanosensitive channel
RA	2,753,942	C→T	55.0%	A20A (GCG→GCA)	mscL ←	mechanosensitive channel
RA	2,755,814	T→C	25.3%	P335P (CCA→CCG)	rsmB ←	16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent
RA	2,756,156	A→G	35.5%	P221P (CCT→CCC)	rsmB ←	16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent
RA	2,756,429	T→A	54.3%	E130D (GAA→GAT)	rsmB ←	16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent
RA	2,756,450	G→A	48.1%	R123R (CGC→CGT)	rsmB ←	16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent
RA	2,756,465	T→A	33.7%	I118I (ATA→ATT)	rsmB ←	16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent
RA	2,758,108	T→C	23.0%	P76P (CCA→CCG)	def ←	peptide deformylase
RA	2,758,998	T→C	34.8%	R178R (CGT→CGC)	smf →	conserved hypothetical protein
RA	2,759,004	C→T	33.7%	A180A (GCC→GCT)	smf →	conserved hypothetical protein
RA	2,759,006	G→C	32.8%	R181P (CGA→CCA)	smf →	conserved hypothetical protein
RA	2,759,842	G→A	26.4%	Q94Q (CAG→CAA)	smg →	conserved hypothetical protein
RA	2,759,854	C→T	21.9%	L98L (CTC→CTT)	smg →	conserved hypothetical protein
RA	2,759,866	T→C	20.6%	T102T (ACT→ACC)	smg →	conserved hypothetical protein
RA	2,760,795	A→G	52.1%	A62A (GCA→GCG)	yrdC →	dsRNA‑binding protein
RA	2,760,838	T→C	65.3%	L77L (TTG→CTG)	yrdC →	dsRNA‑binding protein
RA	2,760,848	T→C	67.6%	V80A (GTG→GCG)	yrdC →	dsRNA‑binding protein
RA	2,761,693	G→C	90.4%	Q169H (CAG→CAC)	aroE →	dehydroshikimate reductase, NAD(P)‑binding
RA	2,761,700	A→G	100%	S172G (AGT→GGT)	aroE →	dehydroshikimate reductase, NAD(P)‑binding
RA	2,761,918	G→A	62.3%	Q244Q (CAG→CAA)	aroE →	dehydroshikimate reductase, NAD(P)‑binding
RA	2,770,615	A→C	33.7%	intergenic (+208/‑61)	metA → / → aceB	homoserine transsuccinylase/malate synthase A
RA	2,771,782	A→G	36.6%	P369P (CCA→CCG)	aceB →	malate synthase A
RA	2,771,983	C→T	20.3%	N436N (AAC→AAT)	aceB →	malate synthase A
RA	2,773,593	T→C	23.8%	T429T (ACT→ACC)	aceA →	isocitrate lyase
RA	2,774,792	G→A	28.0%	R333R (CGG→CGA)	aceK →	isocitrate dehydrogenase kinase/phosphatase
RA	2,775,059	C→T	77.7%	L422L (CTC→CTT)	aceK →	isocitrate dehydrogenase kinase/phosphatase
RA	2,775,071	G→T	73.1%	L426L (CTG→CTT)	aceK →	isocitrate dehydrogenase kinase/phosphatase
RA	2,775,074	A→G	68.0%	E427E (GAA→GAG)	aceK →	isocitrate dehydrogenase kinase/phosphatase
RA	2,775,080	G→T	59.3%	V429V (GTG→GTT)	aceK →	isocitrate dehydrogenase kinase/phosphatase
RA	2,775,083	A→G	60.4%	E430E (GAA→GAG)	aceK →	isocitrate dehydrogenase kinase/phosphatase
RA	2,775,086	T→G	62.0%	G431G (GGT→GGG)	aceK →	isocitrate dehydrogenase kinase/phosphatase
RA	2,778,392	T→A	100%	R145R (CGA→CGT)	iclR ←	DNA‑binding transcriptional repressor
RA	2,778,401	A→G	58.9%	H142H (CAT→CAC)	iclR ←	DNA‑binding transcriptional repressor
RA	2,778,404	C→A	58.8%	T141T (ACG→ACT)	iclR ←	DNA‑binding transcriptional repressor
RA	2,778,442	C→T	17.9%	D129N (GAT→AAT)	iclR ←	DNA‑binding transcriptional repressor
RA	2,778,836	T→C	47.9%	intergenic (‑10/‑190)	iclR ← / → metH	DNA‑binding transcriptional repressor/homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,779,382	C→T	100%	T119T (ACC→ACT)	metH →	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,779,385	G→C	100%	A120A (GCG→GCC)	metH →	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,780,693	G→A	26.8%	A556A (GCG→GCA)	metH →	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,780,711	A→T	20.0%	V562V (GTA→GTT)	metH →	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,780,768	A→G	22.3%	A581A (GCA→GCG)	metH →	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,781,284	C→A	38.7%	T753T (ACC→ACA)	metH →	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,781,293	C→T	43.1%	G756G (GGC→GGT)	metH →	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,781,296	C→T	43.1%	D757D (GAC→GAT)	metH →	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA	2,783,591	T→C	40.7%	G221G (GGT→GGC)	yjbB →	predicted transporter
RA	2,783,600	A→G	47.8%	A224A (GCA→GCG)	yjbB →	predicted transporter
RA	2,783,748	C→T	50.4%	L274L (CTG→TTG)	yjbB →	predicted transporter
RA	2,783,786	T→C	53.0%	R286R (CGT→CGC)	yjbB →	predicted transporter
RA	2,784,005	T→C	46.4%	G359G (GGT→GGC)	yjbB →	predicted transporter
RA	2,784,296	G→A	19.6%	K456K (AAG→AAA)	yjbB →	predicted transporter
RA	2,784,311	G→T	17.1%	V461V (GTG→GTT)	yjbB →	predicted transporter
RA	2,784,954	A→G	78.3%	T129T (ACT→ACC)	pepE ←	(alpha)‑aspartyl dipeptidase
RA	2,785,095	G→A	50.0%	I82I (ATC→ATT)	pepE ←	(alpha)‑aspartyl dipeptidase
RA	2,785,098	C→T	50.0%	E81E (GAG→GAA)	pepE ←	(alpha)‑aspartyl dipeptidase
RA	2,785,101	A→C	50.0%	A80A (GCT→GCG)	pepE ←	(alpha)‑aspartyl dipeptidase
RA	2,785,363	T→A	34.4%	intergenic (‑23/‑189)	pepE ← / → yjbC	(alpha)‑aspartyl dipeptidase/23S rRNA pseudouridine synthase
RA	2,785,369	G→A	36.1%	intergenic (‑29/‑183)	pepE ← / → yjbC	(alpha)‑aspartyl dipeptidase/23S rRNA pseudouridine synthase
RA	2,785,373	C→A	41.2%	intergenic (‑33/‑179)	pepE ← / → yjbC	(alpha)‑aspartyl dipeptidase/23S rRNA pseudouridine synthase
RA	2,785,788	A→C	32.9%	V79V (GTA→GTC)	yjbC →	23S rRNA pseudouridine synthase
RA	2,786,713	G→A	30.2%	T39T (ACC→ACT)	yjbD ←	conserved hypothetical protein
RA	2,787,280	T→C	18.1%	E384E (GAA→GAG)	lysC ←	aspartokinase III
RA	2,787,739	T→C	33.9%	P231P (CCA→CCG)	lysC ←	aspartokinase III
RA	2,790,053	C→G	22.5%	N366K (AAC→AAG)	pgi →	glucosephosphate isomerase
RA	2,790,341	A→G	22.1%	V462V (GTA→GTG)	pgi →	glucosephosphate isomerase
RA	2,790,362	C→T	45.4%	T469T (ACC→ACT)	pgi →	glucosephosphate isomerase
RA	2,791,709	G→A	40.2%	L110L (TTG→TTA)	ubiC →	chorismate pyruvate lyase
RA	2,794,549	A→G	24.9%	I264I (ATT→ATC)	plsB ←	glycerol‑3‑phosphate O‑acyltransferase
RA	2,794,591	T→C	36.7%	A250A (GCA→GCG)	plsB ←	glycerol‑3‑phosphate O‑acyltransferase
RA	2,795,002	A→G	37.2%	R113R (CGT→CGC)	plsB ←	glycerol‑3‑phosphate O‑acyltransferase
RA	2,795,792	A→T	40.3%	A94A (GCA→GCT)	dgkA →	diacylglycerol kinase
RA	2,795,807	C→T	40.4%	S99S (TCC→TCT)	dgkA →	diacylglycerol kinase
RA	2,795,810	T→C	40.5%	A100A (GCT→GCC)	dgkA →	diacylglycerol kinase
RA	2,795,813	G→A	40.8%	A101A (GCG→GCA)	dgkA →	diacylglycerol kinase
RA	2,796,501	T→C	40.0%	N171N (AAT→AAC)	lexA →	DNA‑binding transcriptional repressor
RA	2,797,892	C→G	38.6%	A426G (GCT→GGT)	dinF →	DNA‑damage‑inducible SOS response protein
RA	2,797,905	A→G	44.7%	A430A (GCA→GCG)	dinF →	DNA‑damage‑inducible SOS response protein
RA	2,798,470	C→A	35.5%	V136V (GTG→GTT)	zur ←	DNA‑binding transcriptional activator, Zn(II)‑binding
RA	2,801,019	C→T	57.2%	D159D (GAC→GAT)	yjbN →	tRNA‑dihydrouridine synthase A
RA	2,801,022	C→T	49.2%	D160D (GAC→GAT)	yjbN →	tRNA‑dihydrouridine synthase A
RA	2,801,058	T→C	30.9%	N172N (AAT→AAC)	yjbN →	tRNA‑dihydrouridine synthase A
RA	2,801,121	G→T	33.8%	S193S (TCG→TCT)	yjbN →	tRNA‑dihydrouridine synthase A
RA	2,801,130	C→T	25.4%	S196S (AGC→AGT)	yjbN →	tRNA‑dihydrouridine synthase A
RA	2,801,244	G→A	41.2%	E234E (GAG→GAA)	yjbN →	tRNA‑dihydrouridine synthase A
RA	2,801,633	C→T	43.4%	intergenic (+53/‑81)	yjbN → / → yjbO	tRNA‑dihydrouridine synthase A/phage shock protein G
RA	2,802,488	G→A	62.1%	G206G (GGC→GGT)	qor ←	quinone oxidoreductase, NADPH‑dependent
RA	2,803,427	C→T	54.1%	S80S (AGC→AGT)	dnaB →	replicative DNA helicase
RA	2,803,445	T→C	45.6%	T86T (ACT→ACC)	dnaB →	replicative DNA helicase
RA	2,805,450	C→T	40.4%	T265T (ACC→ACT)	alr →	alanine racemase 1, PLP‑binding, biosynthetic
RA	2,806,425	T→C	37.4%	S146S (AGT→AGC)	tyrB →	tyrosine aminotransferase, tyrosine‑repressible, PLP‑dependent
RA	2,809,462	T→C	42.5%	I117I (ATT→ATC)	yjbQ →	conserved hypothetical protein
RA	2,810,964	G→A	63.0%	G594G (GGC→GGT)	uvrA ←	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
RA	2,810,979	C→T	70.3%	G589G (GGG→GGA)	uvrA ←	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
RA	2,811,009	C→T	31.8%	A579A (GCG→GCA)	uvrA ←	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
RA	2,811,018	C→T	24.0%	P576P (CCG→CCA)	uvrA ←	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
RA	2,811,027	T→C	25.3%	A573A (GCA→GCG)	uvrA ←	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
RA	2,811,594	G→A	43.6%	R384R (CGC→CGT)	uvrA ←	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
RA	2,811,609	A→G	43.1%	H379H (CAT→CAC)	uvrA ←	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
RA	2,814,290	C→G	59.7%	intergenic (‑375/‑55)	yjcB ← / → yjcC	predicted inner membrane protein/predicted signal transduction protein
RA	2,814,312	G→A	38.4%	intergenic (‑397/‑33)	yjcB ← / → yjcC	predicted inner membrane protein/predicted signal transduction protein
RA	2,814,313	G→A	38.3%	intergenic (‑398/‑32)	yjcB ← / → yjcC	predicted inner membrane protein/predicted signal transduction protein
RA	2,814,333	A→G	31.7%	intergenic (‑418/‑12)	yjcB ← / → yjcC	predicted inner membrane protein/predicted signal transduction protein
RA	2,815,784	C→T	49.3%	G480G (GGC→GGT)	yjcC →	predicted signal transduction protein
RA	2,816,585	C→A	34.0%	P81P (CCC→CCA)	soxR →	DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing
RA	2,817,164	T→C	20.7%	A95A (GCT→GCC)	nrfA →	nitrite reductase, formate‑dependent, cytochrome
RA	2,819,774	G→T	26.1%	P61P (CCG→CCT)	nrfD →	formate‑dependent nitrite reductase, membrane subunit
RA	2,820,792	G→C	51.2%	A55A (GCG→GCC)	nrfE →	heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE
RA	2,824,650	A→G	37.5%	Y107Y (TAT→TAC)	yjdC ←	predicted transcriptional regulator
RA	2,824,674	T→C	54.2%	L99L (CTA→CTG)	yjdC ←	predicted transcriptional regulator
RA	2,825,787	G→A	36.0%	T306T (ACC→ACT)	dipZ ←	fused thiol:disulfide interchange protein
RA	2,827,078	G→A	28.2%	intergenic (‑60/+56)	cutA ← / ← dcuA	copper binding protein, copper sensitivity/C4‑dicarboxylate antiporter
RA	2,827,128	T→G	48.0%	intergenic (‑110/+6)	cutA ← / ← dcuA	copper binding protein, copper sensitivity/C4‑dicarboxylate antiporter
RA	2,827,130	A→G	52.2%	intergenic (‑112/+4)	cutA ← / ← dcuA	copper binding protein, copper sensitivity/C4‑dicarboxylate antiporter
RA	2,829,174	A→G	26.0%	S272S (TCT→TCC)	aspA ←	aspartate ammonia‑lyase
RA	2,829,222	A→G	31.0%	V256V (GTT→GTC)	aspA ←	aspartate ammonia‑lyase
RA	2,831,766	T→C	15.4%	A103A (GCA→GCG)	yjeH ←	predicted transporter
RA	2,832,168	T→A	47.5%	intergenic (‑94/‑182)	yjeH ← / → groS	predicted transporter/Cpn10 chaperonin GroES, small subunit of GroESL
RA	2,833,787	A→G	64.5%	E367E (GAA→GAG)	groL →	Cpn60 chaperonin GroEL, large subunit of GroESL
RA	2,835,320	C→T	20.7%	D193N (GAC→AAC)	yjeJ ←	hypothetical protein
RA	2,835,378	G→T	27.1%	D173E (GAC→GAA)	yjeJ ←	hypothetical protein
RA	2,835,651	G→A	22.7%	N82N (AAC→AAT)	yjeJ ←	hypothetical protein
RA	2,835,770	G→A	35.1%	L43L (CTG→TTG)	yjeJ ←	hypothetical protein
RA	2,835,778	A→G	40.8%	V40A (GTC→GCC)	yjeJ ←	hypothetical protein
RA	2,836,483	T→C	66.2%	V279V (GTA→GTG)	yjeK ←	predicted lysine aminomutase
RA	2,836,489	G→C	67.5%	A277A (GCC→GCG)	yjeK ←	predicted lysine aminomutase
RA	2,839,277	G→A	44.1%	A36A (GCC→GCT)	blc ←	outer membrane lipoprotein
RA	2,839,488	A→G	41.4%	L373L (CTT→CTC)	ampC ←	beta‑lactamase/D‑alanine carboxypeptidase
RA	2,839,507	T→G	38.7%	D367A (GAC→GCC)	ampC ←	beta‑lactamase/D‑alanine carboxypeptidase
RA	2,839,818	C→T	34.5%	T263T (ACG→ACA)	ampC ←	beta‑lactamase/D‑alanine carboxypeptidase
RA	2,839,920	A→T	40.0%	P229P (CCT→CCA)	ampC ←	beta‑lactamase/D‑alanine carboxypeptidase
RA	2,841,988	A→G	70.0%	G64G (GGT→GGC)	frdB ←	fumarate reductase (anaerobic), Fe‑S subunit
RA	2,842,244	G→A	73.1%	R579R (CGC→CGT)	frdA ←	fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit
RA	2,843,402	A→G	24.4%	T193T (ACT→ACC)	frdA ←	fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit
RA	2,845,845	T→C	33.8%	Y115Y (TAT→TAC)	yjeM →	predicted transporter
RA	2,845,871	G→A	28.8%	R124H (CGT→CAT)	yjeM →	predicted transporter
RA	2,846,388	T→C	25.5%	N296N (AAT→AAC)	yjeM →	predicted transporter
RA	2,846,814	A→G	55.5%	T438T (ACA→ACG)	yjeM →	predicted transporter
RA	2,848,531	C→T	45.3%	V834V (GTG→GTA)	yjeP ←	predicted mechanosensitive channel
RA	2,848,549	T→C	24.9%	P828P (CCA→CCG)	yjeP ←	predicted mechanosensitive channel
RA	2,849,359	A→G	100%	G558G (GGT→GGC)	yjeP ←	predicted mechanosensitive channel
RA	2,849,365	G→A	100%	G556G (GGC→GGT)	yjeP ←	predicted mechanosensitive channel
RA	2,849,434	C→A	61.1%	P533P (CCG→CCT)	yjeP ←	predicted mechanosensitive channel
RA	2,849,437	T→C	61.2%	L532L (TTA→TTG) ‡	yjeP ←	predicted mechanosensitive channel
RA	2,849,439	A→G	61.2%	L532L (TTA→CTA) ‡	yjeP ←	predicted mechanosensitive channel
RA	2,849,476	C→T	71.5%	L519L (TTG→TTA)	yjeP ←	predicted mechanosensitive channel
RA	2,851,132	A→T	41.0%	P297P (CCT→CCA)	psd ←	phosphatidylserine decarboxylase
RA	2,854,647	C→T	38.4%	L361L (TTG→TTA)	yjeS ←	predicted Fe‑S electron transport protein
RA	2,854,662	T→C	64.6%	I356M (ATA→ATG) ‡	yjeS ←	predicted Fe‑S electron transport protein
RA	2,854,664	T→C	63.6%	I356V (ATA→GTA) ‡	yjeS ←	predicted Fe‑S electron transport protein
RA	2,854,677	T→C	52.7%	R351R (AGA→AGG)	yjeS ←	predicted Fe‑S electron transport protein
RA	2,854,683	T→G	52.8%	I349I (ATA→ATC)	yjeS ←	predicted Fe‑S electron transport protein
RA	2,855,148	G→A	27.1%	G194G (GGC→GGT)	yjeS ←	predicted Fe‑S electron transport protein
RA	2,855,562	T→C	51.3%	A56A (GCA→GCG)	yjeS ←	predicted Fe‑S electron transport protein
RA	2,856,246	G→T	18.4%	L173L (CTG→CTT)	yjeF →	predicted carbohydrate kinase
RA	2,856,258	T→C	20.2%	T177T (ACT→ACC)	yjeF →	predicted carbohydrate kinase
RA	2,856,279	G→A	28.1%	V184V (GTG→GTA)	yjeF →	predicted carbohydrate kinase
RA	2,858,650	G→A	100%	L308L (CTG→CTA)	amiB →	N‑acetylmuramoyl‑l‑alanine amidase II
RA	2,858,656	T→C	100%	G310G (GGT→GGC)	amiB →	N‑acetylmuramoyl‑l‑alanine amidase II
RA	2,858,659	G→A	100%	G311G (GGG→GGA)	amiB →	N‑acetylmuramoyl‑l‑alanine amidase II
RA	2,859,346	C→T	40.6%	S91S (AGC→AGT)	mutL →	methyl‑directed mismatch repair protein
RA	2,860,420	G→T	42.1%	L449L (CTG→CTT)	mutL →	methyl‑directed mismatch repair protein
RA	2,860,429	C→T	44.7%	D452D (GAC→GAT)	mutL →	methyl‑directed mismatch repair protein
RA	2,861,639	C→T	67.5%	D242D (GAC→GAT)	miaA →	delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase
RA	2,863,452	A→G	29.6%	P373P (CCA→CCG)	hflX →	predicted GTPase
RA	2,863,467	T→C	26.3%	R378R (CGT→CGC)	hflX →	predicted GTPase
RA	2,864,086	C→T	32.8%	I129I (ATC→ATT)	hflK →	modulator for HflB protease specific for phage lambda cII repressor
RA	2,865,711	C→T	43.4%	R250R (CGC→CGT)	hflC →	modulator for HflB protease specific for phage lambda cII repressor
RA	2,865,714	G→A	37.9%	A251A (GCG→GCA)	hflC →	modulator for HflB protease specific for phage lambda cII repressor
RA	2,869,590	T→C	39.3%	G425G (GGT→GGC)	rnr →	exoribonuclease R, RNase R
RA	2,869,908	T→C	51.3%	D531D (GAT→GAC)	rnr →	exoribonuclease R, RNase R
RA	2,872,269	T→C	77.1%	S174P (TCA→CCA)	ulaF →	L‑ribulose 5‑phosphate 4‑epimerase
RA	2,872,275	T→C	77.9%	C176R (TGC→CGC)	ulaF →	L‑ribulose 5‑phosphate 4‑epimerase
RA	2,872,329	C→G	28.2%	P194A (CCG→GCG)	ulaF →	L‑ribulose 5‑phosphate 4‑epimerase
RA	2,872,332	C→T	28.1%	R195W (CGG→TGG) ‡	ulaF →	L‑ribulose 5‑phosphate 4‑epimerase
RA	2,872,333	G→A	28.1%	R195Q (CGG→CAG) ‡	ulaF →	L‑ribulose 5‑phosphate 4‑epimerase
RA	2,872,335	C→T	26.9%	H196Y (CAT→TAT)	ulaF →	L‑ribulose 5‑phosphate 4‑epimerase
RA	2,872,350	C→G	22.2%	Q201E (CAA→GAA)	ulaF →	L‑ribulose 5‑phosphate 4‑epimerase
RA	2,872,654	T→C	29.7%	E60E (GAA→GAG)	yjfY ←	hypothetical protein
RA	2,872,681	G→A	25.1%	S51S (AGC→AGT)	yjfY ←	hypothetical protein
RA	2,872,684	T→C	19.4%	E50E (GAA→GAG)	yjfY ←	hypothetical protein
RA	2,872,696	A→G	17.5%	N46N (AAT→AAC)	yjfY ←	hypothetical protein
RA	2,878,535	T→C	35.3%	G210G (GGT→GGC)	cycA →	D‑alanine/D‑serine/glycine transporter
RA	2,879,384	T→C	21.1%	P214P (CCA→CCG)	ytfE ←	predicted regulator of cell morphogenesis and cell wall metabolism
RA	2,879,390	C→T	18.7%	L212L (CTG→CTA)	ytfE ←	predicted regulator of cell morphogenesis and cell wall metabolism
RA	2,879,765	G→A	25.1%	H87H (CAC→CAT)	ytfE ←	predicted regulator of cell morphogenesis and cell wall metabolism
RA	2,879,768	A→G	29.5%	R86R (CGT→CGC)	ytfE ←	predicted regulator of cell morphogenesis and cell wall metabolism
RA	2,879,777	G→A	30.3%	Y83Y (TAC→TAT)	ytfE ←	predicted regulator of cell morphogenesis and cell wall metabolism
RA	2,879,786	G→A	48.0%	I80I (ATC→ATT)	ytfE ←	predicted regulator of cell morphogenesis and cell wall metabolism
RA	2,879,789	G→A	48.0%	I79I (ATC→ATT)	ytfE ←	predicted regulator of cell morphogenesis and cell wall metabolism
RA	2,879,792	A→G	47.1%	H78H (CAT→CAC)	ytfE ←	predicted regulator of cell morphogenesis and cell wall metabolism
RA	2,881,261	T→C	44.1%	H269R (CAC→CGC)	ytfG ←	NAD(P)H:quinone oxidoreductase
RA	2,881,281	T→C	41.4%	T262T (ACA→ACG)	ytfG ←	NAD(P)H:quinone oxidoreductase
RA	2,883,501	C→A	52.7%	L369L (CTG→CTT)	cpdB ←	2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase
RA	2,883,780	G→C	44.4%	A276A (GCC→GCG)	cpdB ←	2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase
RA	2,884,215	T→C	25.6%	A131A (GCA→GCG)	cpdB ←	2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase
RA	2,884,233	G→A	30.7%	Y125Y (TAC→TAT)	cpdB ←	2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase
RA	2,884,356	G→T	15.3%	A84A (GCC→GCA)	cpdB ←	2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase
RA	2,885,111	T→C	28.1%	I105I (ATT→ATC)	cysQ →	PAPS (adenosine 3'‑phosphate 5'‑phosphosulfate) 3'(2'),5'‑bisphosphate nucleotidase
RA	2,891,498	G→A	100%	K51K (AAG→AAA)	ytfQ →	predicted sugar transporter subunit
RA	2,891,504	A→T	100%	G53G (GGA→GGT)	ytfQ →	predicted sugar transporter subunit
RA	2,891,510	G→A	72.2%	T55T (ACG→ACA)	ytfQ →	predicted sugar transporter subunit
RA	2,891,511	T→C	73.2%	L56L (TTG→CTG)	ytfQ →	predicted sugar transporter subunit
RA	2,891,666	A→C	43.9%	V107V (GTA→GTC)	ytfQ →	predicted sugar transporter subunit
RA	2,891,675	C→T	26.7%	L110L (CTC→CTT)	ytfQ →	predicted sugar transporter subunit
RA	2,891,678	T→C	27.0%	D111D (GAT→GAC)	ytfQ →	predicted sugar transporter subunit
RA	2,891,687	T→C	31.7%	I114I (ATT→ATC)	ytfQ →	predicted sugar transporter subunit
RA	2,891,872	A→G	19.4%	K176R (AAG→AGG)	ytfQ →	predicted sugar transporter subunit
RA	2,891,894	C→T	28.4%	I183I (ATC→ATT)	ytfQ →	predicted sugar transporter subunit
RA	2,892,465	G→A	100%	E8E (GAG→GAA)	ytfR →	predicted sugar transporter subunit
RA	2,892,609	T→C	26.8%	T56T (ACT→ACC)	ytfR →	predicted sugar transporter subunit
RA	2,893,065	C→T	41.7%	V208V (GTC→GTT)	ytfR →	predicted sugar transporter subunit
RA	2,893,074	C→T	45.8%	V211V (GTC→GTT)	ytfR →	predicted sugar transporter subunit
RA	2,893,110	C→T	44.6%	F223F (TTC→TTT)	ytfR →	predicted sugar transporter subunit
RA	2,893,824	A→G	73.1%	E461E (GAA→GAG)	ytfR →	predicted sugar transporter subunit
RA	2,894,122	C→T	42.6%	P55P (CCC→CCT)	ytfT →	predicted sugar transporter subunit
RA	2,894,125	A→C	45.3%	I56I (ATA→ATC)	ytfT →	predicted sugar transporter subunit
RA	2,894,374	T→C	27.6%	T139T (ACT→ACC)	ytfT →	predicted sugar transporter subunit
RA	2,894,425	G→A	46.1%	G156G (GGG→GGA)	ytfT →	predicted sugar transporter subunit
RA	2,894,437	G→A	39.9%	T160T (ACG→ACA)	ytfT →	predicted sugar transporter subunit
RA	2,894,506	C→T	17.7%	I183I (ATC→ATT)	ytfT →	predicted sugar transporter subunit
RA	2,894,522	A→C	26.6%	I189L (ATC→CTC)	ytfT →	predicted sugar transporter subunit
RA	2,894,752	C→T	37.2%	L265L (CTC→CTT)	ytfT →	predicted sugar transporter subunit
RA	2,894,755	G→A	48.9%	A266A (GCG→GCA)	ytfT →	predicted sugar transporter subunit
RA	2,895,140	A→C	21.3%	S58S (TCA→TCC)	yjfF →	predicted sugar transporter subunit
RA	2,895,563	G→A	19.2%	A199A (GCG→GCA)	yjfF →	predicted sugar transporter subunit
RA	2,895,566	T→C	28.2%	N200N (AAT→AAC)	yjfF →	predicted sugar transporter subunit
RA	2,895,585	C→T	25.6%	R207C (CGC→TGC)	yjfF →	predicted sugar transporter subunit
RA	2,895,677	G→A	29.9%	A237A (GCG→GCA)	yjfF →	predicted sugar transporter subunit
RA	2,897,573	A→G	27.9%	V135V (GTA→GTG)	mpl →	UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase
RA	2,902,131	A→G	31.7%	N638N (AAT→AAC)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,902,620	A→G	33.3%	D475D (GAT→GAC)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,902,623	A→G	33.3%	D474D (GAT→GAC)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,902,635	G→C	28.1%	L470L (CTC→CTG)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,903,226	T→C	53.2%	S273S (TCA→TCG)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,903,259	T→A	46.3%	R262R (CGA→CGT)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,903,574	G→A	32.6%	G157G (GGC→GGT)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,903,580	C→T	34.3%	E155E (GAG→GAA)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,903,583	A→G	35.5%	H154H (CAT→CAC)	nrdD ←	anaerobic ribonucleoside‑triphosphate reductase
RA	2,904,478	T→G	42.9%	N539T (AAT→ACT)	treC ←	trehalose‑6‑P hydrolase
RA	2,904,485	C→T	45.4%	A537T (GCC→ACC)	treC ←	trehalose‑6‑P hydrolase
RA	2,904,683	T→C	29.5%	I471V (ATC→GTC)	treC ←	trehalose‑6‑P hydrolase
RA	2,904,690	C→T	29.3%	Q468Q (CAG→CAA)	treC ←	trehalose‑6‑P hydrolase
RA	2,905,236	A→T	42.1%	G286G (GGT→GGA)	treC ←	trehalose‑6‑P hydrolase
RA	2,905,981	T→C	23.2%	H38R (CAC→CGC)	treC ←	trehalose‑6‑P hydrolase
RA	2,906,404	T→A	39.3%	A387A (GCA→GCT)	treB ←	fused trehalose(maltose)‑specific enzyme IIBC component of PTS
RA	2,906,419	C→T	33.7%	G382G (GGG→GGA)	treB ←	fused trehalose(maltose)‑specific enzyme IIBC component of PTS
RA	2,906,647	T→C	23.0%	A306A (GCA→GCG)	treB ←	fused trehalose(maltose)‑specific enzyme IIBC component of PTS
RA	2,908,139	T→C	50.0%	K164K (AAA→AAG)	treR ←	DNA‑binding transcriptional repressor
RA	2,910,340	G→A	54.9%	P444P (CCG→CCA)	mgtA →	magnesium transporter
RA	2,910,358	C→T	44.3%	R450R (CGC→CGT)	mgtA →	magnesium transporter
RA	2,911,190	T→C	32.6%	L728L (TTA→CTA)	mgtA →	magnesium transporter
RA	2,911,207	G→A	43.4%	Q733Q (CAG→CAA)	mgtA →	magnesium transporter
RA	2,911,210	C→T	48.0%	N734N (AAC→AAT)	mgtA →	magnesium transporter
RA	2,912,163	G→A	53.4%	D45D (GAC→GAT)	yjgF ←	ketoacid‑binding protein
RA	2,912,172	T→G	55.4%	V42V (GTA→GTC)	yjgF ←	ketoacid‑binding protein
RA	2,912,718	C→T	26.3%	T38T (ACG→ACA)	pyrI ←	aspartate carbamoyltransferase, regulatory subunit
RA	2,912,729	G→A	15.7%	L35L (CTG→TTG)	pyrI ←	aspartate carbamoyltransferase, regulatory subunit
RA	2,913,681	T→C	12.8%	A33A (GCA→GCG)	pyrB ←	aspartate carbamoyltransferase, catalytic subunit
RA	2,919,237	C→T	47.0%	A153A (GCG→GCA)	argI ←	ornithine carbamoyltransferase 1
RA	2,919,561	A→G	46.7%	G45G (GGT→GGC)	argI ←	ornithine carbamoyltransferase 1
RA	2,919,571	T→C	54.8%	K42R (AAA→AGA)	argI ←	ornithine carbamoyltransferase 1
RA	2,920,691	T→A	24.3%	I77I (ATA→ATT)	yjgM ←	predicted acetyltransferase
RA	2,922,600	C→T	38.2%	E874E (GAG→GAA)	valS ←	valyl‑tRNA synthetase
RA	2,922,606	A→G	36.0%	G872G (GGT→GGC)	valS ←	valyl‑tRNA synthetase
RA	2,922,614	T→C	19.8%	I870V (ATC→GTC)	valS ←	valyl‑tRNA synthetase
RA	2,922,621	C→T	19.8%	T867T (ACG→ACA)	valS ←	valyl‑tRNA synthetase
RA	2,924,094	T→C	34.5%	P376P (CCA→CCG)	valS ←	valyl‑tRNA synthetase
RA	2,928,253	T→C	58.7%	L218L (TTG→CTG)	yjgP →	conserved inner membrane protein
RA	2,928,279	C→T	48.5%	D226D (GAC→GAT)	yjgP →	conserved inner membrane protein
RA	2,931,277	A→G	37.7%	A57A (GCT→GCC)	yjgR ←	predicted ATPase
RA	2,947,155	T→C	35.5%	G37G (GGA→GGG)	dnaC ←	DNA biosynthesis protein
RA	2,949,028	G→A	25.8%	L41L (CTG→TTG)	yjjP ←	predicted inner membrane protein
RA	2,949,029	T→C	25.8%	A40A (GCA→GCG)	yjjP ←	predicted inner membrane protein
RA	2,949,119	T→C	41.5%	T10T (ACA→ACG)	yjjP ←	predicted inner membrane protein
RA	2,950,748	G→A	52.7%	R82Q (CGG→CAG)	bglJ →	DNA‑binding transcriptional regulator
RA	2,950,906	T→C	63.3%	L135L (TTA→CTA)	bglJ →	DNA‑binding transcriptional regulator
RA	2,951,444	T→C	24.7%	Q170Q (CAA→CAG)	fhuF ←	ferric iron reductase involved in ferric hydroximate transport
RA	2,954,513	G→A	63.5%	P13P (CCG→CCA)	rimI →	acetylase for 30S ribosomal subunit protein S18
RA	2,956,162	G→A	59.2%	E153E (GAG→GAA)	prfC →	peptide chain release factor RF‑3
RA	2,962,363	T→C	43.8%	E331E (GAA→GAG)	yjjI ←	conserved hypothetical protein
RA	2,962,938	C→T	29.6%	V140I (GTT→ATT)	yjjI ←	conserved hypothetical protein
RA	2,966,357	A→G	50.0%	Q155Q (CAA→CAG)	deoB →	phosphopentomutase
RA	2,966,996	A→T	49.2%	V368V (GTA→GTT)	deoB →	phosphopentomutase
RA	2,966,999	T→C	49.3%	Y369Y (TAT→TAC)	deoB →	phosphopentomutase
RA	2,967,020	C→T	30.0%	G376G (GGC→GGT)	deoB →	phosphopentomutase
RA	2,967,032	T→C	17.9%	H380H (CAT→CAC)	deoB →	phosphopentomutase
RA	2,967,832	T→C	63.5%	T220T (ACT→ACC)	deoD →	purine‑nucleoside phosphorylase
RA	2,969,834	A→G	34.2%	L192L (TTG→CTG)	lplA ←	lipoate‑protein ligase A
RA	2,969,931	G→A	78.9%	L159L (CTC→CTT)	lplA ←	lipoate‑protein ligase A
RA	2,971,610	A→G	38.6%	E142E (GAA→GAG)	serB →	3‑phosphoserine phosphatase
RA	2,972,735	G→C	27.3%	S178S (TCG→TCC)	radA →	predicted repair protein
RA	2,973,590	T→G	54.4%	intergenic (+6/‑15)	radA → / → nadR	predicted repair protein/bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase
RA	2,973,916	T→C	31.1%	R104R (CGT→CGC)	nadR →	bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase
RA	2,975,229	G→A	57.9%	T528T (ACC→ACT)	yjjK ←	fused predicted transporter subunits and ATP‑binding components of ABC superfamily
RA	2,978,639	C→T	33.2%	P539P (CCC→CCT)	slt →	lytic murein transglycosylase, soluble
RA	2,981,016	C→T	16.2%	E195E (GAG→GAA)	rob ←	DNA‑binding transcriptional activator
RA	2,981,022	C→T	14.6%	E193E (GAG→GAA)	rob ←	DNA‑binding transcriptional activator
RA	2,985,313	A→G	41.4%	V282V (GTA→GTG)	creD →	inner membrane protein
RA	2,987,558	G→T	51.1%	A109A (GCG→GCT)	yjtD →	predicted rRNA methyltransferase
RA	2,987,586	T→C	52.1%	L119L (TTG→CTG)	yjtD →	predicted rRNA methyltransferase

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	149312	149348	37	3 [0]	[1] 6	hrpB/mrcB	predicted ATP‑dependent helicase/fused glycosyl transferase and transpeptidase
*	*	÷	minE	252003	252022	20	4 [1]	[1] 2	malZ	maltodextrin glucosidase
*	*	÷	minE	376755	376756	2	5 [0]	[0] 2	fepD	iron‑enterobactin transporter subunit
*	*	÷	minE	412722	412722	1	5 [0]	[0] 5	lnt	apolipoprotein N‑acyltransferase
*	*	÷	minE	444407	444408	2	4 [0]	[0] 3	kdpE	DNA‑binding response regulator in two‑component regulatory system with KdpD
*	*	÷	minE	483574	483626	53	5 [1]	[0] 2	tolA	membrane anchored protein in TolA‑TolQ‑TolR complex
*	*	÷	minE	571893–571903	571945	43–53	2 [0]	[0] 10	ybjE/aqpZ	predicted transporter/aquaporin
*	*	÷	minE	591564	591580	17	3 [1]	[0] 2	ftsK	DNA‑binding membrane protein required for chromosome resolution and partitioning
*	*	÷	minE	681849	681857	9	7 [1]	[0] 4	helD	DNA helicase IV
*	*	÷	minE	698194	698223	30	2 [1]	[0] 4	appA	phosphoanhydride phosphorylase
*	*	÷	minE	750868	750913	46	2 [0]	[0] 4	mfd	transcription‑repair coupling factor
*	*	÷	minE	801993	802023	31	3 [0]	[0] 3	dhaK	dihydroxyacetone kinase, N‑terminal domain
*	*	÷	minE	838390	838410–838391	2–21	4 [0]	[0] 6	ychS	hypothetical protein
*	*	÷	minE	850402	850410	9	3 [0]	[0] 15	tonB	membrane spanning protein in TonB‑ExbB‑ExbD complex
*	*	÷	minE	865556	865593	38	6 [1]	[0] 5	yciQ	predicted inner membrane protein
*	*	÷	minE	875455	875468	14	30 [0]	[0] 8	acnA	aconitate hydratase 1
*	*	÷	minE	890160	890174	15	5 [1]	[0] 7	fabI/ycjD	enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/conserved hypothetical protein
*	*	÷	minE	934800	934808	9	3 [0]	[1] 3	fdnG	formate dehydrogenase‑N, alpha subunit, nitrate‑inducible
*	*	÷	minE	953683	953717	35	6 [0]	[1] 3	yddW	predicted liprotein
*	*	÷	minE	1059122	1059140	19	4 [0]	[0] 5	lhr	predicted ATP‑dependent helicase
*	*	÷	minE	1070441	1070451	11	2 [0]	[0] 12	ribC	riboflavin synthase, alpha subunit
*	*	÷	minE	1109399	1109405	7	12 [1]	[0] 2	ydiS	predicted oxidoreductase, FAD/NAD(P)‑binding domain
*	*	÷	minE	1154070	1154086	17	4 [0]	[0] 9	astE	succinylglutamate desuccinylase
*	*	÷	minE	1190872	1190892	21	6 [0]	[1] 3	yeaJ/rnd	predicted diguanylate cyclase/ribonuclease D
*	*	÷	minE	1333636	1333636	1	6 [0]	[0] 3	wcaI	predicted glycosyl transferase
*	*	÷	minE	1371784	1371792	9	4 [1]	[0] 9	cdd/sanA	cytidine/deoxycytidine deaminase/hypothetical protein
*	*	÷	minE	1420576	1420618	43	3 [0]	[0] 11	ccmF	heme lyase, CcmF subunit
*	*	÷	minE	1438849	1438879	31	11 [0]	[1] 7	yojL	predicted thiamine biosynthesis lipoprotein
*	*	÷	minE	1616738	1616747	10	9 [0]	[0] 19	eutE	predicted aldehyde dehydrogenase, ethanolamine utilization protein
*	*	÷	minE	1618984	1619018	35	17 [1]	[1] 2	eutI	predicted phosphotransacetylase subunit
*	*	÷	minE	1678277	1678280	4	20 [0]	[0] 3	pbpC	fused transglycosylase and transpeptidase
*	*	÷	minE	1763696–1763706	1763706	1–11	2 [0]	[1] 5	rrsG	16S ribosomal RNA
*	*	÷	minE	1790638	1790646	9	4 [1]	[0] 3	gabD	succinate‑semialdehyde dehydrogenase I, NADP‑dependent
*	*	÷	minE	1832694	1832712	19	7 [0]	[1] 3	ygbK	conserved hypothetical protein
*	*	÷	minE	1945265	1945329	65	2 [1]	[0] 2	ygfF/gcvP	predicted NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/glycine decarboxylase, PLP‑dependent, subunit (protein P) of glycine cleavage complex
*	*	÷	minE	2095509	2095514	6	2 [0]	[0] 6	rnpB	RNase P
*	*	÷	minE	2095599	2095632	34	2 [1]	[0] 2	rnpB	RNase P
*	*	÷	minE	2554255	2554282	28	5 [1]	[0] 4	envC	protease with a role in cell division
*	*	÷	minE	2560321	2560327	7	6 [0]	[0] 3	yibK/lldD	predicted rRNA methylase/L‑lactate dehydrogenase, FMN‑linked
*	*	÷	minE	2560364	2560373	10	2 [0]	[0] 5	yibK/lldD	predicted rRNA methylase/L‑lactate dehydrogenase, FMN‑linked
*	*	÷	minE	2618481	2618486	6	2 [0]	[0] 6	yhhP/zntA	conserved hypothetical protein required for cell growth/zinc, cobalt and lead efflux system
*	*	÷	minE	2847609	2847629	21	23 [1]	[1] 11	yjeO	conserved inner membrane protein
*	*	÷	minE	2858116	2858155	40	4 [0]	[0] 7	amiB	N‑acetylmuramoyl‑l‑alanine amidase II

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	= 215622	22 (0.460)	285 (12.480) +27 bp	25/50	NT	94.7%	coding (732/732 nt)	dnaQ	DNA polymerase III epsilon subunit
	?	minE	2705182 =	44 (0.930)					intergenic (+106/‑1)	damX/dam	hypothetical protein/DNA adenine methylase
*	?	minE	= 317783	64 (1.350)	18 (0.400) +GTG	3/98	NT	29.8%	coding (2779/3363 nt)	kefA	fused mechanosensitive channel proteins
	?	minE	2196242 =	26 (0.550)					coding (218/1368 nt)	degQ	serine endoprotease, periplasmic
*	?	minE	436259 =	45 (0.950)	482 (10.990)	48/96	NT	92.6%	intergenic (‑156/‑29)	ybfF/seqA	conserved hypothetical protein/regulatory protein for replication initiation
	?	minE	= 2706018	36 (0.820)					coding (836/837 nt)	dam	DNA adenine methylase
*	?	minE	= 436833	52 (1.090)	1027 (21.610)	54/104	NT	96.1%	coding (546/546 nt)	seqA	regulatory protein for replication initiation
	?	minE	1803907 =	31 (0.650)					intergenic (+63/‑28)	ygaH/mprA	predicted inner membrane protein/DNA‑binding transcriptional regulator
*	?	minE	= 2053940	29 (0.610)	45 (1.090) +AATCATT	3/90	NT	56.5%	intergenic (+98/+83)	cca/bacA	fused tRNA nucleotidyl transferase and 2'3'‑cyclic phosphodiesterase/2'nucleotidase/phosphatase/undecaprenyl pyrophosphate phosphatase
	?	minE	= 2316192	51 (1.070)					intergenic (+1/‑134)	glpK/glpX	glycerol kinase/fructose 1,6‑bisphosphatase II