| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,170,393 | Δ1 bp | 6.1% | coding (731/954 nt) | U712_05805 → | Transcriptional activator protein med |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,170,393 | 0 | C | . | 6.1% | 276.9 / 9.2 | 82 | coding (731/954 nt) | U712_05805 | Transcriptional activator protein med |
| Reads supporting (aligned to +/- strand): ref base C (30/44); new base . (2/3); total (33/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGG > CP006881/1170255‑1170519 | aGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATAc < 1:85341/139‑1 (MQ=255) aaaTGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACTGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATAcgta < 7:353726/139‑4 (MQ=255) aaTGAAGAACGTAGGCGCGGATGTTGTGGATCCCGCCGGAGACGTGTATAATGTTCCTGTTATTCAGCAAATCAAACAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCATTCGGATCTGGGCGAGAATACCGTa < 4:235351/139‑1 (MQ=255) aaGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCAc < 1:146787/139‑1 (MQ=255) aaGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCAc < 1:265343/139‑1 (MQ=255) aaGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCAc < 1:202016/139‑1 (MQ=255) aaGGCGCGGATGTTGTGTATCCCACCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCAc < 3:324067/139‑1 (MQ=255) aGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCg < 5:234207/125‑1 (MQ=255) aGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCg > 6:234207/1‑125 (MQ=255) ggCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACgg > 5:90915/1‑139 (MQ=255) gcgcGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCAc < 5:278945/136‑1 (MQ=255) gcgcGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCAc > 6:278945/1‑136 (MQ=255) gATGTTGTGTATCCCGGCGGAGACGGGTTTAATGTTCGTGTTATTCAGCACATC‑AATAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATAACGTATTAACCAGCACGGTGCaaaa < 6:275373/139‑1 (MQ=255) gttgtGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAAt < 1:83946/138‑1 (MQ=255) tgtATCCCGCCGTAGACGGGTATAATGTTACTGTTATTCAGAAAATCAAAAAAGACTGTCTTTATGCCATAGGCTACGTAACAGATCAATCGGATCTGGGCGAGAATACCTTATTAACCAGCACGGTGCAAAATGTGGa < 6:41128/139‑1 (MQ=255) tATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGAc < 4:65383/138‑1 (MQ=255) tCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAg > 1:102277/1‑139 (MQ=255) cgccgGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGcc > 3:35555/1‑139 (MQ=255) cgccgGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTAAGCCAAAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCTTATTAACCAGCACGGTGCAAAATGTGGACAACGc > 4:86866/1‑138 (MQ=255) ccgGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATA‑CGTATTAACCAGCACTGTGCAAAATGTGGACAAGGCCTAt < 4:184338/139‑1 (MQ=255) cgGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCAc > 2:330027/1‑114 (MQ=255) cgGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCAc < 1:330027/114‑1 (MQ=255) cgGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATA‑CGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTAt > 1:173923/1‑138 (MQ=255) tGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGaa < 7:200932/139‑1 (MQ=255) ttCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAAc > 6:126390/1‑138 (MQ=255) ccTGTTATTCAGCAAATCACAAACGACGGTCTTTATGCCCTAGGCTACGTCACAGATCACTCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGGGGACAAGGCCTATGAAATCATTGCTGAACAAt < 4:357963/139‑1 (MQ=255) ccTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGc < 1:8675/100‑1 (MQ=255) ccTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTg > 5:107252/1‑133 (MQ=255) ccTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTg < 6:107252/133‑1 (MQ=255) ccTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAAt > 1:240504/1‑139 (MQ=255) ccTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAAt > 7:14330/1‑139 (MQ=255) ccTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAAt > 7:229801/1‑139 (MQ=255) ccTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAAt > 7:33187/1‑139 (MQ=255) ccTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAAt > 1:226354/1‑139 (MQ=255) ccTGTAATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGc > 2:8675/1‑100 (MQ=255) cTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGa > 2:354681/1‑109 (MQ=255) cTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGa < 1:354681/109‑1 (MQ=255) cTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAAtt > 5:244333/1‑139 (MQ=255) cTGTTAATCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATTCCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAAt < 4:352483/138‑1 (MQ=255) tCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTtaata > 3:79932/1‑137 (MQ=255) ctcAAATCAAAAAAGACGGGCTTTAAGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAgg < 5:317519/137‑1 (MQ=255) aGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAgg < 8:33187/139‑1 (MQ=255) cAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAgg < 4:293660/137‑1 (MQ=255) cAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAgg > 3:293660/1‑137 (MQ=255) cAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCa < 8:229801/139‑1 (MQ=255) cAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCa > 6:298779/1‑139 (MQ=255) aaaTCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCAc < 1:28017/139‑1 (MQ=255) gACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGggcg < 3:363374/139‑1 (MQ=255) gACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGggcg < 3:126849/139‑1 (MQ=255) gACGGTCTTTATGCCATAGGCTACGTCAAAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCATAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGggcg < 6:322002/139‑1 (MQ=255) ggTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACAAGCACGGTGCAAAAAGTGGACAAGGCCTATGAAAGCATTGCTGAACAATTTAATAAAGGCAACCTTGAGGgcggcg > 8:353904/1‑139 (MQ=255) tATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCa < 5:298779/137‑1 (MQ=255) aTGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATATCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTg > 6:316130/1‑99 (MQ=255) aTGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATAACGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTg < 5:316130/99‑1 (MQ=255) ccATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATtact < 3:372574/138‑1 (MQ=255) aTAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAAtg > 4:251221/1‑67 (MQ=255) aTAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAAtg < 3:251221/67‑1 (MQ=255) aTAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCTTTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATtactac > 1:35392/1‑138 (MQ=255) aTAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTtaat > 2:183898/1‑105 (MQ=255) aTAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTtaat < 1:183898/105‑1 (MQ=255) aTAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACACTTGAGGGCGGCGATCATtactac > 8:189401/1‑138 (MQ=255) ggCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGAc < 2:226354/138‑1 (MQ=255) gCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCt < 6:244333/139‑1 (MQ=255) cTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTg < 5:49912/139‑1 (MQ=255) cTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTg < 6:90915/139‑1 (MQ=255) cGTCATAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGaa < 3:45351/138‑1 (MQ=255) cGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAac > 6:362181/1‑139 (MQ=255) gTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCa > 8:101135/1‑103 (MQ=255) gTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCa < 7:101135/103‑1 (MQ=255) gTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGggcg > 2:346695/1‑115 (MQ=255) gTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGggcg < 1:346695/115‑1 (MQ=255) caGATCAATCGGATCTGGGCGAGAATA‑CGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGggcggc < 6:269689/112‑1 (MQ=255) caGATCAATCGGATCTGGGCGAGAATA‑CGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGggcggc > 5:269689/1‑112 (MQ=255) gATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAg < 2:102277/139‑1 (MQ=255) tCAATCGGATCTGGGCGAGAATA‑CGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCg < 2:173923/139‑1 (MQ=255) aTCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGtt < 7:186786/139‑1 (MQ=255) tCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTg > 3:205156/1‑139 (MQ=255) gATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTgaga < 5:126390/139‑1 (MQ=255) gATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTgaga < 6:181354/139‑1 (MQ=255) gATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTgaga < 2:35392/139‑1 (MQ=255) tGGGCGAGAATACGTTAATAACCAGCACGGTTCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATggg < 5:17215/139‑1 (MQ=255) gtcGATAATACCGTATTAACCAGCACTGTGAATAATGTGGACAAGGACTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACAAGGGAGTCGTTGAGATggg < 3:86866/135‑1 (MQ=255) gaATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGtt < 3:315928/124‑1 (MQ=255) gaATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGtt > 4:315928/1‑124 (MQ=255) | AGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGGCACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGG > CP006881/1170255‑1170519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |