| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 859,372 | A→T | 5.5% | K240N (AAA→AAT) | U712_04165 → | putative ABC transporter ATP‑binding protein YfiC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 859,372 | 0 | A | T | 5.5% | 248.8 / 2.3 | 82 | K240N (AAA→AAT) | U712_04165 | putative ABC transporter ATP‑binding protein YfiC |
| Reads supporting (aligned to +/- strand): ref base A (41/35); new base T (3/2); total (45/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACA > CP006881/859235‑859510 | aCCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTTAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAg > 5:60484/1‑139 (MQ=255)aCCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAg > 5:66095/1‑139 (MQ=255) ccATTATTCGGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAg > 4:96564/1‑138 (MQ=255) ccATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAg > 1:62528/1‑138 (MQ=255) ttattCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCata < 6:167011/139‑1 (MQ=255) attCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCatat > 6:175236/1‑138 (MQ=255) cGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCaaa < 7:119704/128‑1 (MQ=255) cGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCaaa > 8:119704/1‑128 (MQ=255) cGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCAc < 8:167719/138‑1 (MQ=255) cGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACg > 3:173/1‑139 (MQ=255) gTGATGGCAGCGCGCCTGAAATGGATCACCAACCTAACGGGAAAGCTGTATAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGCAATCTGTTTCAGGCGCAAAGGTCATCAACGCATATTCACGt > 5:190940/1‑138 (MQ=255) gTGATGGCAGCGAGCCTGAAATGGATCACCACCCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGt > 6:173020/1‑138 (MQ=255) gTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGt > 7:355498/1‑138 (MQ=255) gTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGt > 2:172433/1‑138 (MQ=255) gATGGCAGCGAGCCTGAAATGGATCACCAACCGATCGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTgag < 4:288723/139‑1 (MQ=255) aTGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTgag > 7:141132/1‑138 (MQ=255) aTGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTgag > 3:148052/1‑138 (MQ=255) aTGGCAGCGAGACAGAAATGGATAACCAACCGAACGGCAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGTAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATACACGTgag > 3:33789/1‑138 (MQ=255) cGATCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGAt < 4:173/139‑1 (MQ=255) cGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGAt > 6:333267/1‑139 (MQ=255) cGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGAt > 4:276570/1‑139 (MQ=255) aGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTa < 1:24792/139‑1 (MQ=255) ccTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTAct > 8:191949/1‑139 (MQ=255) aTCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGAGCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTcc > 4:193659/1‑139 (MQ=255) ccAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCg > 3:175777/1‑138 (MQ=255) cGGGAAAGCTGTTTAAATAAAAGCAGAAAAAACTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCTCAAAGGTCATCAAAGCATATTCACGTGAGAAGCATATTACTGCTGAATTCCTCGAAAAAACCg < 8:141132/138‑1 (MQ=255) gggAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGAt < 1:248148/111‑1 (MQ=255) gggAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGAt > 2:248148/1‑111 (MQ=255) ggAAAGATGTTTAAATAACATCATAAAAACCTTGGTGATGTGAATGGGTATTTTGAGTAATCTGTTTCCTGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGATGATTACTGCTTAATTCCTCGAAAAAAACggtt < 4:33789/139‑4 (MQ=255) tttAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCaa < 6:73643/137‑1 (MQ=255) tttAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGa > 2:25754/1‑139 (MQ=255) tAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACg > 8:101230/1‑139 (MQ=255) aGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCg < 7:101230/139‑1 (MQ=255) aaCAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGATGCACTCAAGACGACggg > 8:229294/1‑139 (MQ=255) agcagAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAg < 7:45148/86‑1 (MQ=255) agcagAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAg > 8:45148/1‑86 (MQ=255) agcagAAAAACATTCGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACTCTGCACTCAAGACGTCGGGCtt > 1:27203/1‑139 (MQ=255) cTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGa < 7:134782/139‑1 (MQ=255) ttGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGAc > 7:29784/1‑139 (MQ=255) aaTGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTc < 7:191949/134‑1 (MQ=255) aTGGGTATATTGAGGAATCTGTTTCAGGCGAAAATGTATTCAAAGCATATTGACGTGAGAATCATATTACTGGTTTATTCCTCGAAAAATACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGtt < 2:27203/139‑1 (MQ=255) tGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAATGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGt > 8:241308/1‑137 (MQ=255) tGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAATGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGt > 8:246694/1‑137 (MQ=255) tGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAATGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGt < 7:246694/137‑1 (MQ=255) tGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAATGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGt < 7:241308/137‑1 (MQ=255) gTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTAtt > 3:203546/1‑139 (MQ=255) tatTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTcc > 8:96188/1‑138 (MQ=255) ttGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGaaaaaa > 7:250525/1‑81 (MQ=255) ttGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGaaaaaa < 8:250525/81‑1 (MQ=255) ttGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGa < 8:252746/138‑1 (MQ=255) ttGAGGAATCTGTATCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTTCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTATTGGGCGCAGACGATTACCGGGTATATTACGaa > 8:134678/1‑139 (MQ=255) gAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGa > 2:179477/1‑133 (MQ=255) gAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGa < 1:179477/133‑1 (MQ=255) gAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCa > 6:218330/1‑139 (MQ=255) gAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCa > 1:299780/1‑139 (MQ=255) gAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCa > 3:158220/1‑139 (MQ=255) gAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAAAGCTGCACTCAAGACGTCGCGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCAGAAGGTCa > 8:58066/1‑139 (MQ=255) gAATCTGGTTCAGGCGCAAAGGTCATCAATGCATATTCACGTGAGAAGCTGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGAAGTCGGGCTTTTTGGCGCAGACGATTTCCGGGTTTATGCCGAAGGTCa > 7:88862/1‑139 (MQ=255) aTCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGATAAGCAGATTACTGCTGAATTCCTCGa < 8:76612/69‑1 (MQ=255) aTCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGa > 7:76612/1‑69 (MQ=255) tCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAg > 8:119471/1‑132 (MQ=255) tCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAg < 7:119471/132‑1 (MQ=255) tGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAAc > 1:13466/1‑139 (MQ=255) tGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAAc > 4:327059/1‑139 (MQ=255) tGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTAAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAAc > 8:110509/1‑139 (MQ=255) tttCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGa < 2:62528/135‑1 (MQ=255) tatCAGGCGGAATGGTCATCAAAGCATATTCACGTGAGAATCAGATTAATGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGaa < 7:229294/134‑1 (MQ=255) aGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCttt > 8:337455/1‑138 (MQ=255) ggCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGa < 7:110509/139‑1 (MQ=255) ggCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGa < 1:172433/139‑1 (MQ=255) ggCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGa < 1:277425/139‑1 (MQ=255) ggCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGa < 3:276570/139‑1 (MQ=255) ggCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGa < 2:299780/139‑1 (MQ=255) ggCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGGCATGAACTCTTTGa < 5:79218/139‑1 (MQ=255) ggCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGACGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGa < 1:345859/139‑1 (MQ=255) gcgcAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGaa < 6:60484/139‑1 (MQ=255) gcgcAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGaa < 6:66095/139‑1 (MQ=255) aGGTCATCAAAGCATATTCACGTGAGAAGCAGATTAGTGCTGATTTCCTGGATAAATACGCTGCTCTGAAGACGTCGGTCTTTTGGGGGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACtt < 6:190940/139‑1 (MQ=255) aGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACtt < 6:298769/139‑1 (MQ=255) aGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACtt < 8:29784/139‑1 (MQ=255) tcatcaAAGCATATTCACGGGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCCGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAg < 8:92840/139‑1 (MQ=255) catcaAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGCACTCGTTGAATAACTTAAGc > 7:73006/1‑139 (MQ=255) atcaAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACtt > 1:148383/1‑134 (MQ=255) atcaAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACtt < 2:148383/134‑1 (MQ=255) aGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTAc > 3:277387/1‑138 (MQ=255) aGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACa < 4:203546/139‑1 (MQ=255) | ACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGCTGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACA > CP006881/859235‑859510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |