| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 886,407 | T→A | 5.5% | I252I (ATT→ATA) | U712_04305 → | putative isomerase yfhB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 886,407 | 0 | T | A | 5.5% | 268.1 / 3.4 | 87 | I252I (ATT→ATA) | U712_04305 | putative isomerase yfhB |
| Reads supporting (aligned to +/- strand): ref base T (51/31); new base A (2/3); total (53/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGCGACCTGCACGGGCGCCACTTTTCATCCCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAATACGGATGATGG > CP006881/886272‑886545 | cAGCGACCTGCACGGGCGCCACTTTTCATCCCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGaa > 1:181516/1‑139 (MQ=255) aGCGACCTGCACGGGCGCCACTTTTCATCCCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAAc < 8:98919/139‑1 (MQ=255) aGCGACCTGCACGGGCGCCACTTTTCATCCCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAAc < 7:193685/139‑1 (MQ=255) cGACCTGCACGGGCGCCACTTTTCATCCCCGTATTCGGGAACGATTGAAGCCCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAAc > 7:39201/1‑137 (MQ=255) cGACCTGCACGGGCGCCACTTTTCATCCCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAAc > 2:298192/1‑137 (MQ=255) aCCTGCACGGGCGCCACTTTTCATCCCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAgg > 7:198437/1‑139 (MQ=255) aCTTTTAATACCCGTATTAGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATAATTGAACAATGGCAGGAAATTTGaa > 2:364450/1‑138 (MQ=255) aTCCACGTTTTCGGGAACGATTGAACACCCCGAGACCGGCACAGGATCCGGCGTTATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACACGGGCAGGAAATTGTAAAAGACGGa < 8:160099/139‑1 (MQ=255) tCCCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGaa < 2:181516/139‑1 (MQ=255) ccccGTATTCGGGAACGATTGAAGACACCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGAAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACTGaa > 4:230351/1‑138 (MQ=255) gggAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGAt < 7:30505/138‑1 (MQ=255) aaCGTTTGAAGACCCCGTGACCGGCACAGCATCCGTCGTGATGGGGTTTTATATGAAACATTATGGCAATTCCGAGCAGCATTAATTTATCTTTGAACAAGGGCAGTAAATTGGAAAAGACGGAAAAGTGGAGATCGaa < 8:198437/139‑1 (MQ=255) aaCGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGaa < 8:39201/139‑1 (MQ=255) cccGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATCGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcg > 4:139894/1‑139 (MQ=255) cGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggc > 8:22687/1‑139 (MQ=255) cGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggc > 1:164189/1‑139 (MQ=255) cGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggc > 2:13389/1‑139 (MQ=255) cGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggc > 2:170328/1‑139 (MQ=255) tGACCGGCACCGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGAATAAATTTATCATTGAACACGGGCAGGAAATTGCAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggcgg < 1:364450/139‑1 (MQ=255) tcaaaGCATAAGGCGTGATGGGGGCTAATATGAAACATTATGGCAATGACGAGCAGCATAAATTTATCATTGAACAAGTGAAGGAAATTGGAAAAGCCGGAAAATTGGAGATCGAAATGCACGAAGCAGGCGGCCAtgt > 2:106461/5‑139 (MQ=255) gCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTTTCATTGaa < 1:129748/74‑1 (MQ=255) gCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGaa > 2:129748/1‑74 (MQ=255) agctttcGGCGTGATGGGGGCTTATATGAAACATTATGGAAATGCGGAGCATCATAAATTTTTGATTCAACAAGGGCATCAAATTGTAAAACACGTAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGGGaaa < 2:118959/133‑1 (MQ=255) aGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGaaa < 1:13389/139‑1 (MQ=255) cATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGt > 7:110878/1‑139 (MQ=255) aTCCGGCGGGATGGGGGCTTATATGAAACATTATGGCAATGCCGATCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTg < 1:312760/139‑1 (MQ=255) cGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAAc < 4:240397/139‑1 (MQ=255) ggCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACa > 1:91914/1‑139 (MQ=255) cGTGATGTGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTTTCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATg < 7:313642/139‑1 (MQ=255) gTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGa > 5:115075/1‑139 (MQ=255) gATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGa > 4:77316/1‑137 (MQ=255) atatGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGt > 4:280203/1‑139 (MQ=255) aaCATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACt > 7:129874/1‑138 (MQ=255) aaCATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACt > 8:267960/1‑138 (MQ=255) aaCATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACt > 8:269408/1‑138 (MQ=255) aaCATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACt > 6:89694/1‑138 (MQ=255) aaCATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGACATGTGAAAGTGAACATGACAGGAACAGCCGTTTACt > 7:189224/1‑138 (MQ=255) tATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGaaa > 5:145635/1‑139 (MQ=255) tATGGAAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCTAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGaaa > 6:239328/1‑139 (MQ=255) attGGCAATGCCGAGCAGCATAAATTTATATTTGAACAAGGGCAGGAATTTGGAAAACACTGAAAAGAGGAGATCGAAATGAACGAAGCCCGCGGCCAGGTGAAAGAGATCATGACAGGAACAGCCGTATACTCAaaaa > 4:216660/3‑139 (MQ=255) aTGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTa < 1:222794/138‑1 (MQ=255) aTGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTa > 2:222794/1‑138 (MQ=255) aTGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAt > 3:227968/1‑139 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCAtgt > 1:52533/1‑93 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCAtgt < 2:52533/93‑1 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAAc > 5:354381/1‑103 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAAc < 6:354381/103‑1 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAtt > 5:61639/1‑139 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAtt > 3:58082/1‑139 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAtt > 7:155260/1‑139 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAtt > 3:42921/1‑139 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAtt > 3:25345/1‑139 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAtt > 3:197703/1‑139 (MQ=255) tGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAt > 8:291948/1‑138 (MQ=255) tGCCGAGCAGCATAAATTTATCATAGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAtt > 8:198732/1‑139 (MQ=255) tGCCGAGCAGCATAAATTTATCATAGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTAt > 8:193571/1‑138 (MQ=255) gAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTa < 2:91914/139‑1 (MQ=255) agcagcATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCt > 5:99816/1‑136 (MQ=255) agcagcATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTa > 3:190566/1‑138 (MQ=255) gcagcaTAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTa < 1:115306/137‑1 (MQ=255) aTAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGaaa < 7:331135/86‑1 (MQ=255) aTAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGaaa > 8:331135/1‑86 (MQ=255) aTAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCt < 7:267960/138‑1 (MQ=255) tAAATTTATCTTAGAACAAGGCCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGATGCAGTCGGCCATGTGAAAGTGAACATGACAGGAACATCCGTTTACTCAGAAACCCGTATTCTTAAAATCTaa < 3:216660/139‑1 (MQ=255) tAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTaa > 1:34281/1‑139 (MQ=255) aaaTTTATCATAGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAAt < 7:193571/139‑1 (MQ=255) aaTTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAATa < 4:42921/139‑1 (MQ=255) aaTTTATCATAGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGATAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAAt < 7:198732/138‑1 (MQ=255) ttATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGACCATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAACTCTACTACg > 6:334136/1‑138 (MQ=255) tATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGAc < 6:167381/90‑1 (MQ=255) tATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGAc > 5:167381/1‑90 (MQ=255) taaTTGACCACGGGCCGGAAATGGCAAACGACGGAAAAGTGGAGATCTAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAATACGgatg < 1:170328/137‑1 (MQ=255) tCATTGAACAATGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCCTATTCTTAAAATCTAATACGgat > 5:184239/1‑138 (MQ=255) tCATTGAACAAGTGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAATACGgatg < 7:291948/139‑1 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggcgg > 7:308639/1‑67 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggcgg < 8:308639/67‑1 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggcgg < 8:274068/67‑1 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCcggcgg > 7:274068/1‑67 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGAc < 4:287743/88‑1 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGAc > 3:287743/1‑88 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAAc > 5:212583/1‑112 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAAc < 6:207765/112‑1 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAAc > 5:207765/1‑112 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAAc < 6:212583/112‑1 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAAt < 4:186018/132‑1 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAAt > 3:186018/1‑132 (MQ=255) tCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAATACGgat > 8:142188/1‑138 (MQ=255) tGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAATACGGATGATgg > 6:237370/1‑139 (MQ=255) | CAGCGACCTGCACGGGCGCCACTTTTCATCCCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGCAATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAAGTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCCGTTTACTCAGAAACCCGTATTCTTAAAATCTAATACGGATGATGG > CP006881/886272‑886545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |