| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 895,672 | T→G | 10.3% | F254V (TTT→GTT) | U712_04380 → | Uncharacterized protein yfhO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 895,672 | 0 | T | G | 10.3% | 201.5 / 4.0 | 93 | F254V (TTT→GTT) | U712_04380 | Uncharacterized protein yfhO |
| Reads supporting (aligned to +/- strand): ref base T (40/42); new base G (9/2); total (49/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.41e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTTATATTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTGCCGGCCGCTTTTCTGCTGTTTTTGT > CP006881/895539‑895810 | ccTTATATTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTtgtg > 3:321337/1‑139 (MQ=255) cTTATATTCATAGGAATCTATGTGCTTTTCAGATGGCTGATCCGTTTGGAACCACATGCAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTTGTGc < 8:316416/139‑1 (MQ=255) tataTTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCg > 6:173464/1‑139 (MQ=255) tataTTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCg > 3:119819/1‑139 (MQ=255) tataTTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGAGGCGGCGTTTGTGCCg > 4:365252/1‑139 (MQ=255) tataTTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGACTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCg > 8:348272/1‑139 (MQ=255) atatTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCgg > 5:367363/1‑139 (MQ=255) tatTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCgg > 8:187154/1‑138 (MQ=255) tatTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGgt > 4:85712/1‑139 (MQ=255) aTCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAGTCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGgtagta > 6:179304/1‑138 (MQ=255) aTCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCTGCGTGTGTGCCGgtagta > 1:205139/1‑138 (MQ=255) aTCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCgg < 4:23618/133‑1 (MQ=255) aTCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGgtagta > 7:300942/1‑138 (MQ=255) aTCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGGGCCgg > 3:23618/1‑133 (MQ=255) aTCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTAGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGAGGCGGCGTTTGTGCCGgtagta > 6:323754/1‑138 (MQ=255) tCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGtata > 3:169208/1‑139 (MQ=255) tCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGtata > 3:175269/1‑139 (MQ=255) tCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTTGTGCCGGGAGtat > 1:261460/1‑138 (MQ=255) tgCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTaaa < 5:173464/139‑1 (MQ=255) cTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTTGTATAAGGGTTTTTAaaca > 6:229157/1‑139 (MQ=255) cTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAaac > 7:328691/1‑138 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCTTCAGTGCGTCGGCGTTTTTGCCCGTATTATACCGTTTTTTTaaaaac > 3:221938/1‑138 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTtgt < 6:10110/110‑1 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTTAACAAcc > 6:96487/1‑139 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAaacaac > 4:365864/1‑138 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAAcc > 7:225536/1‑139 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAAcc > 5:343974/1‑139 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAAcc > 4:360427/1‑139 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTtgt > 5:10110/1‑110 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTTGTGGCGGTAGTTTACGGTTTTTTTAaccacc > 1:145548/1‑139 (MQ=255) ttCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTTGTGCCGGTAGTATACGGTTTTTTAAACAAcc > 4:230407/1‑139 (MQ=255) aGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTgc < 6:343974/139‑1 (MQ=255) aGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTgc < 8:328691/139‑1 (MQ=255) aTGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTgcgc > 8:163239/1‑139 (MQ=255) tGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTgcgc < 6:367363/138‑1 (MQ=255) tGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGcc < 5:68050/139‑1 (MQ=255) tGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGcc < 2:49144/139‑1 (MQ=255) gCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACg > 8:148108/1‑116 (MQ=255) gCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACg > 3:75891/1‑116 (MQ=255) gCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACg < 8:205502/116‑1 (MQ=255) gCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACg < 4:75891/116‑1 (MQ=255) gCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACg < 7:148108/116‑1 (MQ=255) gCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACg > 7:205502/1‑116 (MQ=255) tGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTc > 2:21278/1‑138 (MQ=255) tGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGGATACGGTTTTTTAAACAACCTGCGCCCTcc > 2:123919/1‑139 (MQ=255) aaccGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCAGTACTTTTGGCATCAGTGCGGCGGCGGTTGGGGCGGTAGTATGAGGTTTTTTTAACACCCAGCGCCCtacc > 2:337202/3‑135 (MQ=255) aggTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATAc < 1:350065/137‑1 (MQ=255) cGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATAc < 7:163239/138‑1 (MQ=255) cGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATAc < 8:225536/138‑1 (MQ=255) tttGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCgg < 4:19101/98‑1 (MQ=255) tttGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGtata > 7:346555/1‑105 (MQ=255) tttGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGtata < 8:346555/105‑1 (MQ=255) tttGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCGCCATACAGc > 2:121195/1‑139 (MQ=255) tttGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTTGTGCCgg > 3:19101/1‑98 (MQ=255) ggAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCa < 8:300942/138‑1 (MQ=255) caTGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTTGTGGCGGTAGTTTAAGGTTTTTTTAACAACCTGCGCCCTCCAAACATCCAGaaaa > 6:38228/1‑136 (MQ=255) caTGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGGTTGTGGCGGTAGTATAAGGGTTTTTAAACAACCTGCGCCCGCCCTACAGCCACAAAAt > 2:350065/1‑137 (MQ=255) tGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATagag < 7:121606/139‑1 (MQ=255) agagAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTGTGTGCCGGGAGTATACGGTGTTTTAAACCCCCAGCGCCCTCCATACAGCCAGAAAATAGAGTgt > 7:142030/1‑138 (MQ=255) gaAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCgg > 4:339300/1‑80 (MQ=255) gaAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCgg < 3:339300/80‑1 (MQ=255) aTTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCgatg < 3:11700/139‑1 (MQ=255) ttCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGccc < 8:50364/100‑1 (MQ=255) ttCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGccc > 7:50364/1‑100 (MQ=255) ttCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCgatga > 7:303971/1‑139 (MQ=255) aaaTCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGataa < 4:119819/139‑1 (MQ=255) aaaTCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGata < 3:373824/138‑1 (MQ=255) aTCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCgg > 1:294263/1‑64 (MQ=255) aTCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCgg < 2:294263/64‑1 (MQ=255) gTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCg < 6:145078/115‑1 (MQ=255) gTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCg > 5:145078/1‑115 (MQ=255) gTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGc < 1:123919/138‑1 (MQ=255) gTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGc < 5:38228/138‑1 (MQ=255) gTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGGGCCGGTAGTATACGGTTGTTTAAACAACCTGCGCCCTCCATACAGCCCGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGc < 7:127497/138‑1 (MQ=255) gTTTCAGACTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAg < 7:348272/137‑1 (MQ=255) tttCATGCTTCATTTCTTTTGGCATCAGTGCGGCGTCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCg < 2:205139/139‑1 (MQ=255) aGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGat < 5:179304/138‑1 (MQ=255) aGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGat < 1:27378/138‑1 (MQ=255) aGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGat < 3:85712/138‑1 (MQ=255) aGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGat < 5:229157/138‑1 (MQ=255) aTTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTTAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCTATGATAATATCTGTTTTTCTAGCCGGttcagatttg > 2:27378/1‑133 (MQ=255) ttttGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTg > 3:77409/1‑58 (MQ=255) ttttGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTg < 4:77409/58‑1 (MQ=255) ttttGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTgccg > 8:284165/1‑139 (MQ=255) tGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTgccggc < 7:187154/138‑1 (MQ=255) tGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTgccggc < 7:284165/138‑1 (MQ=255) gCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTgccggccg < 8:303971/138‑1 (MQ=255) gCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTgccggccg < 5:96487/138‑1 (MQ=255) gCATCAGTGCGGCGGCGGTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTgccggccg < 3:230407/138‑1 (MQ=255) aGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCa > 8:159484/1‑65 (MQ=255) aGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCa < 7:159484/65‑1 (MQ=255) tGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTGCCGGCCGCTTTTctg < 3:360427/139‑1 (MQ=255) tGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTGCCGGCCGCTTTTctg < 3:365864/139‑1 (MQ=255) tttGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTAGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTGCCGGCCGCGTTTCTGGTGttttttt > 6:134792/1‑137 (MQ=255) | CCTTATATTCATCGGAATCTATGTGCTGTTCAGATGGCTGATCCGTTTGGAACCACATGAAGAGAAAAGATGGATTCAAATCAGATTATTTCTCGTTTCAGGCTTCATTTCTTTTGGCATCAGTGCGGCGGCGTTTGTGCCGGTAGTATACGGTTTTTTAAACAACCTGCGCCCTCCATACAGCCAGAAAATAGAGTGGCTCAATTTCGATGATAATATCTTATTTTCGAGCCGGATCATCATTGTGCCGGCCGCTTTTCTGCTGTTTTTGT > CP006881/895539‑895810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |