| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,906,788 | G→A | 5.2% | W312* (TGG→TAG) | U712_20140 → | putative metabolite transport protein CsbC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,906,788 | 0 | G | A | 5.2% | 258.8 / 2.0 | 77 | W312* (TGG→TAG) | U712_20140 | putative metabolite transport protein CsbC |
| Reads supporting (aligned to +/- strand): ref base G (36/37); new base A (2/2); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCATTTTTACGAAGGCCGGTCTTGGCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCTATATCGTCTTTTACCAGGCGACATG > CP006881/3906653‑3906920 | ccATTTTTACGAAGGCCGGTCTTGGCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTgggg < 4:327094/139‑1 (MQ=255) tACGAAGGCCGGTCTTGGCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAgtgt < 7:165080/138‑1 (MQ=255) tACGAAGGCCGGTCTTGGCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTAAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAgtgt < 5:242232/138‑1 (MQ=255) aaGGCCGGTCTTGGCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCTACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCa < 7:286912/139‑1 (MQ=255) aaGGCCGGTCTTGGCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCa < 6:341229/139‑1 (MQ=255) aaGGCCGGTCTTGGCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATAATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGTGGTAGTGACGGc > 6:242232/1‑138 (MQ=255) gCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGaa > 6:252245/1‑117 (MQ=255) gCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGaa < 5:252245/117‑1 (MQ=255) acaTCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTtg < 7:54879/139‑1 (MQ=255) aTCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATGATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCAt < 2:9618/123‑1 (MQ=255) aTCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCAt > 1:9618/1‑123 (MQ=255) tCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCCTGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTAGGGAAGTGTCGGCATCACACTGAGCCTtgctg > 8:248737/1‑139 (MQ=255) tCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTtgctg > 3:163227/1‑139 (MQ=255) cAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTtgctgc < 3:304650/139‑1 (MQ=255) aGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTtg > 8:19301/1‑134 (MQ=255) aGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTtg < 7:19301/134‑1 (MQ=255) gcTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGc < 5:288362/139‑1 (MQ=255) cGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTg > 7:199485/1‑139 (MQ=255) cGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTg > 3:320765/1‑139 (MQ=255) ggCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGt < 3:200883/137‑1 (MQ=255) caATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCt < 5:290572/139‑1 (MQ=255) aaTGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTg < 3:73754/139‑1 (MQ=255) aaTCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTAACAGGCGTGCTCCAGACACTg > 3:347285/1‑139 (MQ=255) aTCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTtgct < 4:374350/111‑1 (MQ=255) aTCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTtgct > 3:374350/1‑111 (MQ=255) aTCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTgg > 3:80115/1‑139 (MQ=255) aTCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTgg > 5:203421/1‑139 (MQ=255) cATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCtt < 4:80115/139‑1 (MQ=255) cATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGAGTGCTCCTGACACTGGGGCtt > 8:117333/1‑139 (MQ=255) cTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCTCACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCg < 8:199485/139‑1 (MQ=255) cTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCg < 4:320765/139‑1 (MQ=255) cTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCg > 4:333704/1‑139 (MQ=255) cTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCg > 1:200571/1‑139 (MQ=255) aCGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCAt > 6:110935/1‑138 (MQ=255) gTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCaa < 2:200571/139‑1 (MQ=255) atcatGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACa < 4:193360/138‑1 (MQ=255) atcatGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACa < 6:203421/138‑1 (MQ=255) tATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGAt > 7:318082/1‑138 (MQ=255) tATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATg > 8:208330/1‑139 (MQ=255) tCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGa > 2:35826/1‑138 (MQ=255) cACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGa > 3:210700/1‑137 (MQ=255) aCTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACag < 5:285247/139‑1 (MQ=255) aCTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACag < 5:290402/139‑1 (MQ=255) cTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACag > 2:120577/1‑138 (MQ=255) ccATGATCTTAATTGACCGTGTCGGCCGCAAAAACCTTCTGCTCTGGGGAAGTGTCGGCATCACCCTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGCTGACagtagt > 7:293512/1‑139 (MQ=255) ccATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACCGCGTGGATGACcgtagt > 5:244607/1‑139 (MQ=255) aTCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCttt < 8:318082/138‑1 (MQ=255) aTCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACAATGGTGCTTTCCGCAGCAAAAGCGTGAATCACAGTATTCtttg > 1:118522/1‑138 (MQ=255) ttAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCa > 5:248684/1‑52 (MQ=255) ttAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCa < 6:248684/52‑1 (MQ=255) ttAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCAt > 4:369016/1‑53 (MQ=255) ttAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCAt < 3:369016/53‑1 (MQ=255) aaTTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTtctc < 1:35826/136‑1 (MQ=255) aaTTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCgg < 1:120577/138‑1 (MQ=255) aaTTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCg < 8:280818/137‑1 (MQ=255) aaTTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCg < 3:118695/137‑1 (MQ=255) aaTTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGgt > 5:365829/1‑139 (MQ=255) aaTTGACCGTGTCGGCCGCAAAAAACTTCTGATCTAGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCg > 6:360653/1‑115 (MQ=255) aaTTGACCGTGTCGGCCGCAAAAAACTTCTGATCTAGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCg < 5:360653/115‑1 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCCCACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCta > 8:3612/1‑139 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAg < 1:321577/55‑1 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAg > 2:321577/1‑55 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCtt < 8:2709/95‑1 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCtt > 7:2709/1‑95 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCgg > 1:246827/1‑133 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCgg < 2:246827/133‑1 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCta > 5:138721/1‑139 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCta > 2:280001/1‑139 (MQ=255) aCCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACT‑GGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCta > 1:268882/1‑138 (MQ=255) cGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCtata > 2:47874/1‑139 (MQ=255) gtgtCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCTatat > 3:231236/1‑139 (MQ=255) ggcGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGGCTTTATCg > 5:248776/3‑139 (MQ=255) cAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCTATATCGTCTTTTAc < 6:365829/139‑1 (MQ=255) aaaaaCTTCTGATCTAGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCTATATCGTCTTTTACCa < 7:248737/139‑1 (MQ=255) aaaaCTTCTGATCTGGGGAAGGGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGGGCACCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACCGTAGTCTTTCTCGGTGTCTATATCGTCTTTTACCac < 6:37918/139‑2 (MQ=255) cTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGAGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCTATATCGTCTTTTACCAGGCGACa < 7:117333/138‑1 (MQ=255) agcTGTGGATGTGGCGGCATCAGACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGAGAGTGGGGCTTTCCGAATCATAAGCGTTGTTGACAGTAGGCTTTCTCGGTGTCTATATCGTCTTTTACCAGGCGACATg < 5:117629/135‑1 (MQ=255) aTCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCTATATCGTCTTTTACCAGGCGACATg < 6:138721/137‑1 (MQ=255) | CCATTTTTACGAAGGCCGGTCTTGGCACATCAGCTTCGGCGCTCGGCACAATGGGAATCGGCATCCTCAACGTCATCATGTGTATCACTGCCATGATCTTAATTGACCGTGTCGGCCGCAAAAAACTTCTGATCTGGGGAAGTGTCGGCATCACACTGAGCCTTGCTGCTTTATCAGGCGTGCTCCTGACACTGGGGCTTTCCGCATCAACAGCGTGGATGACAGTAGTCTTTCTCGGTGTCTATATCGTCTTTTACCAGGCGACATG > CP006881/3906653‑3906920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |